Jatropha Genome Database

JcCB0082241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0082241.10 + phase: 0 /pseudo/partial
         (243 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75760.1 | Symbols:  | ER lumen protein retaining receptor fa...   357   3e-99
AT1G19970.1 | Symbols:  | ER lumen protein retaining receptor fa...   350   3e-97
AT4G38790.1 | Symbols:  | ER lumen protein retaining receptor fa...   335   1e-92
AT2G21190.1 | Symbols:  | ER lumen protein retaining receptor fa...   330   6e-91
AT3G25160.1 | Symbols:  | ER lumen protein retaining receptor fa...   253   6e-68
AT3G25040.1 | Symbols:  | ER lumen protein retaining receptor, p...    84   1e-16
AT1G29330.1 | Symbols: ATERD2, AERD2, ERD2 | ERD2 (ENDOPLASMIC R...    82   3e-16

>AT1G75760.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr1:28446940-28448421 REVERSE
          Length = 272

 Score =  357 bits (917), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 172/199 (86%), Positives = 182/199 (91%)

Query: 45  AGLSLKSQELTALFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFKLRSSYMDDK 104
           AGLSLKSQELTALFLAVRLYCSFVME+DIH            +VIYMIRFKL++SYMDDK
Sbjct: 74  AGLSLKSQELTALFLAVRLYCSFVMEFDIHTLLDSATLVTTLFVIYMIRFKLKASYMDDK 133

Query: 105 DNFAIYYVVIPCAVLSFLIHPSTHHHILNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPF 164
           DNFAIYYVVIPC VLS LIHPSTHHHI+N+I WAFCVYLEAVSVLPQLRVMQNTKIVEPF
Sbjct: 134 DNFAIYYVVIPCVVLSVLIHPSTHHHIINKISWAFCVYLEAVSVLPQLRVMQNTKIVEPF 193

Query: 165 TAHYVFALGVARFLNCAHWVLQVLDTRGRLLTALGYGLWPPMVLLSEVVQTFILADFCYY 224
           TAHYVFALG+ARFL+CAHWVLQVLDTRGRLLTALGYG WP MVLLSE+VQTFILADFCYY
Sbjct: 194 TAHYVFALGIARFLSCAHWVLQVLDTRGRLLTALGYGFWPIMVLLSEIVQTFILADFCYY 253

Query: 225 YVKSLVGGQLVLRLPSGVV 243
           YVKSL+GGQLVLRLPSGVV
Sbjct: 254 YVKSLMGGQLVLRLPSGVV 272


>AT1G19970.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr1:6931194-6932597 REVERSE
          Length = 272

 Score =  350 bits (899), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 165/199 (82%), Positives = 181/199 (90%)

Query: 45  AGLSLKSQELTALFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFKLRSSYMDDK 104
           AG+SLK+QELTALFLAVRLYCSFVME+D+H            WV+YMIRFKLR +YM+DK
Sbjct: 74  AGISLKTQELTALFLAVRLYCSFVMEFDLHTFLDSATLVTTLWVVYMIRFKLRPTYMEDK 133

Query: 105 DNFAIYYVVIPCAVLSFLIHPSTHHHILNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPF 164
           DNFAIY+VVIPCAVLSF IHPST HHI+NRI WAFCVYLEAVSVLPQLRVMQNTKIVEPF
Sbjct: 134 DNFAIYFVVIPCAVLSFFIHPSTRHHIINRISWAFCVYLEAVSVLPQLRVMQNTKIVEPF 193

Query: 165 TAHYVFALGVARFLNCAHWVLQVLDTRGRLLTALGYGLWPPMVLLSEVVQTFILADFCYY 224
           TAHYVFALG+ARFL+CAHW+LQVLDTRGRLLTALG GLWP MVL+SE+VQTFILADFCYY
Sbjct: 194 TAHYVFALGIARFLSCAHWILQVLDTRGRLLTALGSGLWPVMVLISEIVQTFILADFCYY 253

Query: 225 YVKSLVGGQLVLRLPSGVV 243
           YV+SL+GGQLVLRLPSGVV
Sbjct: 254 YVQSLMGGQLVLRLPSGVV 272


>AT4G38790.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr4:18111426-18112977 FORWARD
          Length = 273

 Score =  335 bits (860), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/199 (80%), Positives = 174/199 (87%)

Query: 45  AGLSLKSQELTALFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFKLRSSYMDDK 104
           AGLSLKSQELTA+FLAVRLYCS VMEYDIH            WVI+MIRFKLR+SYM+DK
Sbjct: 75  AGLSLKSQELTAIFLAVRLYCSIVMEYDIHTILDLATLGTTLWVIFMIRFKLRASYMEDK 134

Query: 105 DNFAIYYVVIPCAVLSFLIHPSTHHHILNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPF 164
           DNF +YYV+ PC  L+  IHPST H+I+NRI WA CVYLEAVSVLPQLRVMQNTKIVEPF
Sbjct: 135 DNFPLYYVLAPCVALAVFIHPSTSHNIINRISWALCVYLEAVSVLPQLRVMQNTKIVEPF 194

Query: 165 TAHYVFALGVARFLNCAHWVLQVLDTRGRLLTALGYGLWPPMVLLSEVVQTFILADFCYY 224
           TAHYVFALGVARFL+CAHWVLQV+DTRGRLL ALGYGLWP MVL+SE+VQTFILADFCYY
Sbjct: 195 TAHYVFALGVARFLSCAHWVLQVVDTRGRLLVALGYGLWPSMVLISEIVQTFILADFCYY 254

Query: 225 YVKSLVGGQLVLRLPSGVV 243
           YVKS+ GGQLVLRLPSGVV
Sbjct: 255 YVKSVFGGQLVLRLPSGVV 273


>AT2G21190.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr2:9080916-9082642 FORWARD
          Length = 269

 Score =  330 bits (845), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 156/199 (78%), Positives = 173/199 (86%)

Query: 45  AGLSLKSQELTALFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFKLRSSYMDDK 104
           AGLSLKSQELTA+FLAVRLYCSFVMEYDIH            WVIYMIRF L+++YM++K
Sbjct: 71  AGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFNLKTTYMEEK 130

Query: 105 DNFAIYYVVIPCAVLSFLIHPSTHHHILNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPF 164
           DNFA+YYV+ PC VL+  IHPST H+ILNRI W FCVYLEAVSVLPQLRVMQNTKIVEPF
Sbjct: 131 DNFALYYVLAPCVVLAVWIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVMQNTKIVEPF 190

Query: 165 TAHYVFALGVARFLNCAHWVLQVLDTRGRLLTALGYGLWPPMVLLSEVVQTFILADFCYY 224
           TAHYVFALGVARF +CAHWVLQ++DT GRLL  LGYGLWP MV++SE+VQTFILADFCYY
Sbjct: 191 TAHYVFALGVARFFSCAHWVLQMMDTHGRLLVVLGYGLWPSMVIISEIVQTFILADFCYY 250

Query: 225 YVKSLVGGQLVLRLPSGVV 243
           YVKS+ GGQLVLRLPSGVV
Sbjct: 251 YVKSVFGGQLVLRLPSGVV 269


>AT3G25160.1 | Symbols:  | ER lumen protein retaining receptor
           family protein | chr3:9160337-9162023 REVERSE
          Length = 272

 Score =  253 bits (647), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 122/196 (62%), Positives = 153/196 (78%), Gaps = 1/196 (0%)

Query: 45  AGLSLKSQELTALFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFKLRSSYMDDK 104
           +GLSLKSQE+TA+FLAVRL CS  ME DIH            WVIYMIR+KL++SY+   
Sbjct: 76  SGLSLKSQEVTAIFLAVRLICSINMEGDIHTVLDFATLVSTLWVIYMIRYKLKASYIKSL 135

Query: 105 DNFAIYYVVIPCAVLSFLIHPSTHHHILNRICWAFCVYLEAVSVLPQLRVMQNTKIVEPF 164
           D    YYV++P A+L+ +I+PST +   +RI WAFCVY E+VSVLPQLR+MQN +I+EPF
Sbjct: 136 DTCYNYYVLVPSAILALIINPSTSYSYFHRILWAFCVYTESVSVLPQLRLMQNAQIIEPF 195

Query: 165 TAHYVFALGVARFLNCAHWVLQVLDTRGRLLTALGYG-LWPPMVLLSEVVQTFILADFCY 223
           TAHYVFALG+ARFL CAHW++QV++TRG  L  LG G  W P+ LL+E+VQTFILADFCY
Sbjct: 196 TAHYVFALGIARFLACAHWIIQVVETRGHYLWLLGAGYFWFPVALLAEIVQTFILADFCY 255

Query: 224 YYVKSLVGGQLVLRLP 239
           YYVKS++ GQLVL++P
Sbjct: 256 YYVKSVMEGQLVLKMP 271


>AT3G25040.1 | Symbols:  | ER lumen protein retaining receptor,
           putative / HDEL receptor, putative |
           chr3:9124479-9126051 FORWARD
          Length = 215

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 18/200 (9%)

Query: 45  AGLSLKSQELTALFLAVR---LYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFK-LRSSY 100
           AG+SLK+QEL A+  A R   ++ SFV  Y+               V YM   K +  +Y
Sbjct: 30  AGVSLKTQELYAIVFATRYLDIFTSFVSLYNTSMKLVFLGSSFSI-VWYMKYHKAVHRTY 88

Query: 101 MDDKDNFAIYYVVIPCAVLSFLIHPSTHHHILNRICWAFCVYLEAVSVLPQLRVMQNTKI 160
             ++D F  +++V+PC +L+ LIH          + W   +YLEAV++LPQL ++Q T+ 
Sbjct: 89  DREQDTFRHWFLVLPCFLLALLIHEK---FTFLEVLWTSSLYLEAVAILPQLVLLQRTRN 145

Query: 161 VEPFTAHYVFALGVARFLNCAHWVLQVLDTRGRLLTALGYGLWPPMVLLSEVVQTFILAD 220
           ++  T  Y+F LG  R L   +W+        R  T   +  W  +  ++  VQT + AD
Sbjct: 146 IDNLTGQYIFLLGGYRGLYILNWIY-------RYFTEPHFVHW--ITWIAGFVQTLLYAD 196

Query: 221 FCYYYVKSLVGGQLVLRLPS 240
           F YYY  S    +  L+LP+
Sbjct: 197 FFYYYFLSWKNNK-KLQLPA 215


>AT1G29330.1 | Symbols: ATERD2, AERD2, ERD2 | ERD2 (ENDOPLASMIC
           RETICULUM RETENTION DEFECTIVE 2); KDEL sequence binding
           / receptor | chr1:10258580-10260906 REVERSE
          Length = 215

 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 96/201 (47%), Gaps = 20/201 (9%)

Query: 45  AGLSLKSQELTALFLAVR---LYCSFVMEYD-IHXXXXXXXXXXXXWVIYMIRFKL-RSS 99
           AG+SLK+QEL AL    R   L+  +V  Y+ I             W   M R  L R S
Sbjct: 30  AGISLKTQELYALVFLTRYLDLFTDYVSLYNSIMKIVFIASSLAIVWC--MRRHPLVRRS 87

Query: 100 YMDDKDNFAIYYVVIPCAVLSFLIHPSTHHHILNRICWAFCVYLEAVSVLPQLRVMQNTK 159
           Y  D D F   YVV+ C VL  +++       +  + WAF +YLEAV++LPQL ++Q + 
Sbjct: 88  YDKDLDTFRHQYVVLACFVLGLILN---EKFTVQEVFWAFSIYLEAVAILPQLVLLQRSG 144

Query: 160 IVEPFTAHYVFALGVARFLNCAHWVLQVLDTRGRLLTALGYGLWPPMVLLSEVVQTFILA 219
            V+  T  YV  LG  R L   +W+        R  T   +  W   V  S +VQT + A
Sbjct: 145 NVDNLTGQYVVFLGAYRGLYIINWIY-------RYFTEDHFTRWIACV--SGLVQTALYA 195

Query: 220 DFCYYYVKSLVGGQLVLRLPS 240
           DF YYY  S       L+LP+
Sbjct: 196 DFFYYYYISW-KTNTKLKLPA 215