Jatropha Genome Database

JcCB0081401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0081401.10 + phase: 0 /partial
         (218 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23660.2 | Symbols: AtPPT1 | AtPPT1 (Arabidopsis thaliana pol...   156   1e-38
AT4G23660.1 | Symbols: AtPPT1 | AtPPT1 (Arabidopsis thaliana pol...   156   1e-38

>AT4G23660.2 | Symbols: AtPPT1 | AtPPT1 (Arabidopsis thaliana
           polyprenyltransferase 1); 4-hydroxybenzoate
           nonaprenyltransferase | chr4:12328086-12331359 REVERSE
          Length = 407

 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 106/177 (59%), Gaps = 11/177 (6%)

Query: 43  TNP---NFINIFIPTLNQFIQSYHCTSLGFKISHENQNPNPLNLKFFREISTLSS----- 94
           +NP   ++ N F      +  +Y   S G ++  E       N +    +S+ SS     
Sbjct: 37  SNPVTTHYTNPFTKCYPSWNDNYQVWSKGRELHQEKFFGVGWNYRLICGMSSSSSVLEGK 96

Query: 95  -SKNNENQENGGSSKEGHQSWIDLYLPRQARPYARLARLDKPIGTWLLTWPCMWSISLAA 153
             K+++ + +G   KE   SWIDLYLP + R YA+LARLDKPIGTWLL WPCMWSI+LAA
Sbjct: 97  PKKDDKEKSDGVVVKE--ASWIDLYLPEEVRGYAKLARLDKPIGTWLLAWPCMWSIALAA 154

Query: 154 SPGHLPDLKMMXXXXXXXXXXXXXXCTINDLLDRDIDTKVERTKLRPIASGLLTPFQ 210
            PG LP  K M              CTINDLLD+DIDTKV+RTKLRPIASGLLTPFQ
Sbjct: 155 DPGSLPSFKYMALFGCGALLLRGAGCTINDLLDQDIDTKVDRTKLRPIASGLLTPFQ 211


>AT4G23660.1 | Symbols: AtPPT1 | AtPPT1 (Arabidopsis thaliana
           polyprenyltransferase 1); 4-hydroxybenzoate
           nonaprenyltransferase | chr4:12328086-12331359 REVERSE
          Length = 407

 Score =  156 bits (394), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 106/177 (59%), Gaps = 11/177 (6%)

Query: 43  TNP---NFINIFIPTLNQFIQSYHCTSLGFKISHENQNPNPLNLKFFREISTLSS----- 94
           +NP   ++ N F      +  +Y   S G ++  E       N +    +S+ SS     
Sbjct: 37  SNPVTTHYTNPFTKCYPSWNDNYQVWSKGRELHQEKFFGVGWNYRLICGMSSSSSVLEGK 96

Query: 95  -SKNNENQENGGSSKEGHQSWIDLYLPRQARPYARLARLDKPIGTWLLTWPCMWSISLAA 153
             K+++ + +G   KE   SWIDLYLP + R YA+LARLDKPIGTWLL WPCMWSI+LAA
Sbjct: 97  PKKDDKEKSDGVVVKE--ASWIDLYLPEEVRGYAKLARLDKPIGTWLLAWPCMWSIALAA 154

Query: 154 SPGHLPDLKMMXXXXXXXXXXXXXXCTINDLLDRDIDTKVERTKLRPIASGLLTPFQ 210
            PG LP  K M              CTINDLLD+DIDTKV+RTKLRPIASGLLTPFQ
Sbjct: 155 DPGSLPSFKYMALFGCGALLLRGAGCTINDLLDQDIDTKVDRTKLRPIASGLLTPFQ 211