Jatropha Genome Database

JcCB0080131.10

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0080131.10 + phase: 0 /partial
         (210 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08640.1 | Symbols:  | unknown protein | chr1:2748714-2751209...   281   2e-76

>AT1G08640.1 | Symbols:  | unknown protein | chr1:2748714-2751209
           REVERSE
          Length = 294

 Score =  281 bits (719), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 132/181 (72%), Positives = 152/181 (83%)

Query: 30  DSDLNPYEVLGVSPFEGFDKVKAAYTKKLKEAESIGDEVTASLLEKAYDKLMMSQLTSRK 89
           D+D NPYEVLGV+P EGFDK+K  Y +KLK+A+  GDE TA+LLEKAYDKLM +QL +RK
Sbjct: 70  DADFNPYEVLGVNPIEGFDKIKQTYGRKLKDAQRSGDEATAALLEKAYDKLMYAQLMNRK 129

Query: 90  KGVAYGSFKVSKDIKYADKQPIVPWGPRFAKSSIQDMRINLAISGAFIAWILIKRNADYK 149
           KGV +GSFKVSKDIKYADKQPI+PWGPRF++SS  DM INLAIS  F AWI IKRN +YK
Sbjct: 130 KGVTFGSFKVSKDIKYADKQPIIPWGPRFSRSSKNDMLINLAISVVFSAWIAIKRNVEYK 189

Query: 150 PLQFLAFAFVYRIFEKLKSFEPPVSPTFTEDGEDDGRALRMGKRLLRSLALVFGCIAFAS 209
           PLQF++F FVYRIFEKLKSFE P SP + E+GE+ GR LRMGKRLLRSL+LVFG I  AS
Sbjct: 190 PLQFMSFVFVYRIFEKLKSFEAPSSPIYNEEGEESGRGLRMGKRLLRSLSLVFGSILLAS 249

Query: 210 L 210
           L
Sbjct: 250 L 250