Jatropha Genome Database

JcCB0077821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0077821.10 + phase: 0 
         (362 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61530.2 | Symbols: PANB2 | PANB2; 3-methyl-2-oxobutanoate hy...   571   e-163
AT3G61530.1 | Symbols: PANB2 | PANB2; 3-methyl-2-oxobutanoate hy...   571   e-163
AT2G46110.1 | Symbols: PANB1, KPHMT1 | KPHMT1 (KETOPANTOATE HYDR...   560   e-160

>AT3G61530.2 | Symbols: PANB2 | PANB2; 3-methyl-2-oxobutanoate
           hydroxymethyltransferase | chr3:22771692-22773313
           REVERSE
          Length = 354

 Score =  571 bits (1471), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/331 (82%), Positives = 300/331 (90%)

Query: 23  LRSMSNVPENTVYGGPKSQNPNERVTLTQLKQKHKKGEPITVVTAYDYPSAVHLDQAGID 82
           +R MSNVPE+TVYGGPK QN N+RVTLTQL+QKH+KGEPIT+VTAYDYPSAVH+D AGID
Sbjct: 20  VRFMSNVPEDTVYGGPKPQNSNQRVTLTQLRQKHRKGEPITMVTAYDYPSAVHIDTAGID 79

Query: 83  ICLVGDSAAMVVHGHDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTKQAVD 142
           +CLVGDSAAMVVHG+DTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESST QAVD
Sbjct: 80  VCLVGDSAAMVVHGYDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVD 139

Query: 143 TAVRVLKEGGMDAIKLEGGSPSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 202
           TAVRVLKEGGMDAIKLEGGSPSRITAAK+IVEAGIAVMGHVGLTPQAISVLGGFRPQGKN
Sbjct: 140 TAVRVLKEGGMDAIKLEGGSPSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 199

Query: 203 ISSAVKVVETSLALQEVGCFSVVLECXXXXXXXXXTSALRIPTIGIGAGPFCSGQVLVYH 262
           I+SAVKVVET++ALQE GCFSVVLEC         TSAL IPTIGIGAGPFCSGQVLVYH
Sbjct: 200 IASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALNIPTIGIGAGPFCSGQVLVYH 259

Query: 263 DLLGMLQHPHHAKVTPKFCKQYAQVGDVINKALLEYKEEVTNSSFPGPAHSPYKINAADI 322
           DLLGM+QHPHHAKVTPKFCKQYAQVG+VINKALLEYKEEV+   FPGP+HSPYKI+++D+
Sbjct: 260 DLLGMMQHPHHAKVTPKFCKQYAQVGEVINKALLEYKEEVSKHLFPGPSHSPYKISSSDL 319

Query: 323 NGLLNELQKLGLNKXXXXXXXXXEKIKTSES 353
           +G L+ELQKLGL+K         EK+  S+S
Sbjct: 320 DGFLSELQKLGLDKAASDAAASAEKMDHSDS 350


>AT3G61530.1 | Symbols: PANB2 | PANB2; 3-methyl-2-oxobutanoate
           hydroxymethyltransferase | chr3:22771692-22773313
           REVERSE
          Length = 354

 Score =  571 bits (1471), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/331 (82%), Positives = 300/331 (90%)

Query: 23  LRSMSNVPENTVYGGPKSQNPNERVTLTQLKQKHKKGEPITVVTAYDYPSAVHLDQAGID 82
           +R MSNVPE+TVYGGPK QN N+RVTLTQL+QKH+KGEPIT+VTAYDYPSAVH+D AGID
Sbjct: 20  VRFMSNVPEDTVYGGPKPQNSNQRVTLTQLRQKHRKGEPITMVTAYDYPSAVHIDTAGID 79

Query: 83  ICLVGDSAAMVVHGHDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTKQAVD 142
           +CLVGDSAAMVVHG+DTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESST QAVD
Sbjct: 80  VCLVGDSAAMVVHGYDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVD 139

Query: 143 TAVRVLKEGGMDAIKLEGGSPSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 202
           TAVRVLKEGGMDAIKLEGGSPSRITAAK+IVEAGIAVMGHVGLTPQAISVLGGFRPQGKN
Sbjct: 140 TAVRVLKEGGMDAIKLEGGSPSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 199

Query: 203 ISSAVKVVETSLALQEVGCFSVVLECXXXXXXXXXTSALRIPTIGIGAGPFCSGQVLVYH 262
           I+SAVKVVET++ALQE GCFSVVLEC         TSAL IPTIGIGAGPFCSGQVLVYH
Sbjct: 200 IASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALNIPTIGIGAGPFCSGQVLVYH 259

Query: 263 DLLGMLQHPHHAKVTPKFCKQYAQVGDVINKALLEYKEEVTNSSFPGPAHSPYKINAADI 322
           DLLGM+QHPHHAKVTPKFCKQYAQVG+VINKALLEYKEEV+   FPGP+HSPYKI+++D+
Sbjct: 260 DLLGMMQHPHHAKVTPKFCKQYAQVGEVINKALLEYKEEVSKHLFPGPSHSPYKISSSDL 319

Query: 323 NGLLNELQKLGLNKXXXXXXXXXEKIKTSES 353
           +G L+ELQKLGL+K         EK+  S+S
Sbjct: 320 DGFLSELQKLGLDKAASDAAASAEKMDHSDS 350


>AT2G46110.1 | Symbols: PANB1, KPHMT1 | KPHMT1 (KETOPANTOATE
           HYDROXYMETHYLTRANSFERASE 1); 3-methyl-2-oxobutanoate
           hydroxymethyltransferase | chr2:18954807-18956411
           REVERSE
          Length = 347

 Score =  560 bits (1444), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 266/330 (80%), Positives = 295/330 (89%)

Query: 23  LRSMSNVPENTVYGGPKSQNPNERVTLTQLKQKHKKGEPITVVTAYDYPSAVHLDQAGID 82
           +R MSN+PENTVYGGPK QNPN+RVTLT L+QKH++GEPITVVTAYDYPSAVHLD AGID
Sbjct: 18  VRFMSNLPENTVYGGPKPQNPNQRVTLTHLRQKHRRGEPITVVTAYDYPSAVHLDTAGID 77

Query: 83  ICLVGDSAAMVVHGHDTTLPISLEEMLVHCRAVARGAKRPLLVGDLPFGTYESSTKQAVD 142
           +CLVGDSA+MVVHGHDTTLPISL+EMLVHCRAVARGAKRPLLVGDLPFGTYESS+ QAVD
Sbjct: 78  VCLVGDSASMVVHGHDTTLPISLDEMLVHCRAVARGAKRPLLVGDLPFGTYESSSSQAVD 137

Query: 143 TAVRVLKEGGMDAIKLEGGSPSRITAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKN 202
           TAVRVLKEGGMDAIKLEGGS SRITAAKAIVEAGIAV+GHVGLTPQAISVLGGFRPQG+N
Sbjct: 138 TAVRVLKEGGMDAIKLEGGSASRITAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQGRN 197

Query: 203 ISSAVKVVETSLALQEVGCFSVVLECXXXXXXXXXTSALRIPTIGIGAGPFCSGQVLVYH 262
           I+SAVKVVET++ALQE GCFSVVLEC         TSAL+IPTIGIGAGPFCSGQVLVYH
Sbjct: 198 IASAVKVVETAMALQEAGCFSVVLECVPPPVAAAATSALKIPTIGIGAGPFCSGQVLVYH 257

Query: 263 DLLGMLQHPHHAKVTPKFCKQYAQVGDVINKALLEYKEEVTNSSFPGPAHSPYKINAADI 322
           DLLGM+QHPHHAKVTPKFCKQYA VG+VINKAL+EYKEEV+   FPGP+HSPYKI A+++
Sbjct: 258 DLLGMMQHPHHAKVTPKFCKQYANVGEVINKALMEYKEEVSKKVFPGPSHSPYKITASEL 317

Query: 323 NGLLNELQKLGLNKXXXXXXXXXEKIKTSE 352
           +G L ELQKLG +K         E ++ S+
Sbjct: 318 DGFLTELQKLGFDKAASAAALAAENMEPSK 347