Jatropha Genome Database

JcCB0077031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0077031.10 - phase: 0 /TE
         (1148 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   145   2e-34
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    73   1e-12

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 111/185 (60%), Gaps = 7/185 (3%)

Query: 807 EPESFEEAMGNEHKRNWIEAMQDEMKSLHEDETFEXXXXXXXXXXXXXXWVFRIKQEEHS 866
           EP ++ EA   +    W  AM DE+ ++    T+E              WV++IK     
Sbjct: 85  EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141

Query: 867 SQPRFKARLVVKGFNQRKDIDFDEIFSPVVKMTSIQTVLGMAASFDLKIEQMDETTAFLH 926
           +  R+KARLV KG+ Q++ IDF E FSPV K+TS++ +L ++A ++  + Q+D + AFL+
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201

Query: 927 GDLEEEIYMEXPEGFIKKGRE----DCVCKLKKSLYGLKQALRQWYKKFESIMGEHGYRK 982
           GDL+EEIYM+ P G+  +  +    + VC LKKS+YGLKQA RQW+ KF   +   G+ +
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261

Query: 983 TTSDH 987
           + SDH
Sbjct: 262 SHSDH 266


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 5/132 (3%)

Query: 782 RRSSRVRQLYTRYSANEYVLTTDGGEPESFEEAMGNEHKRNWIEAMQDEMKSLHEDETFE 841
           R  + + +L  +YS    + TT   EP+S   A+ +     W +AMQ+E+ +L  ++T+ 
Sbjct: 4   RSKAGINKLNPKYSLT--ITTTIKKEPKSVIFALKDP---GWCQAMQEELDALSRNKTWI 58

Query: 842 XXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKDIDFDEIFSPVVKMTSI 901
                         WVF+ K     +  R KARLV KGF+Q + I F E +SPVV+  +I
Sbjct: 59  LVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

Query: 902 QTVLGMAASFDL 913
           +T+L +A   ++
Sbjct: 119 RTILNVAQQLEV 130