Jatropha Genome Database
- JcCB0075081.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0075081.20 - phase: 0
(461 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1... 459 e-129
AT5G09420.1 | Symbols: ATTOC64-V, MTOM64 | ATTOC64-V (ARABIDOPSI... 349 2e-96
AT3G17970.1 | Symbols: atToc64-III | atToc64-III (Arabidopsis th... 347 9e-96
AT3G25660.1 | Symbols: | glutamyl-tRNA(Gln) amidotransferase, p... 75 1e-13
AT5G07360.1 | Symbols: | amidase family protein | chr5:2326925-... 65 7e-11
AT5G64440.1 | Symbols: AtFAAH | AtFAAH (Arabidopsis thaliana fat... 63 4e-10
>AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I | AMI1 (AMIDASE 1);
amidase/ hydrolase, acting on carbon-nitrogen (but not
peptide) bonds / indoleacetamide hydrolase |
chr1:2884455-2886430 FORWARD
Length = 425
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/450 (53%), Positives = 298/450 (66%), Gaps = 32/450 (7%)
Query: 1 MARNPDYGAFMEKFVLKPTNLSDELP-LNGLTFAVKDIFEVDGYVTGFGNPDWARTHLAA 59
MA N D+GAF+EK + PT+ S P L GLTFA+KDIF+V+G VTGFGNPDW RTH AA
Sbjct: 1 MATNNDFGAFIEKVTISPTSTSSSPPSLQGLTFAIKDIFDVEGRVTGFGNPDWLRTHSAA 60
Query: 60 TSTAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXX 119
TSTAP V ++L GAT +G T+MDEMAYSINGEN HYGTP NP A D VP
Sbjct: 61 TSTAPVVSSLLEAGATALGITIMDEMAYSINGENAHYGTPRNPIAFDRVPGGSSSGSAVA 120
Query: 120 XXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFARNPV 179
+LVDFS+GTDTGGSVRVPASYC I GFRPSHG VST G+ PMAQSFDTVGWFAR+
Sbjct: 121 VAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTVGWFARDTA 180
Query: 180 ILNHVGRVLLQLPDVDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVIY 239
L VG VLLQ ++ + PSQ+IIA+DCF+L S+P+ + Q LV SVEK FGG
Sbjct: 181 TLKRVGCVLLQQHHLNPIEPSQLIIADDCFKLCSVPHDLLVQPLVGSVEKSFGG------ 234
Query: 240 ELFWNPADSLGILRNIYMFCNGPSHVVKHLTLGDFVENKVPSLKHFMSKE--IKEQGYDI 297
+ VVK + LG+++ VPSLKHFM+ + +Q + I
Sbjct: 235 -----------------------NTVVKKVNLGEYIGQNVPSLKHFMTSDDVTTQQEFCI 271
Query: 298 XXXXXXXXXXXXXERYEFKNNHGEWVTTVEPDLGPGISERVWEAVKMTGGNIDACYSVKX 357
+R+EFK NHG W+++V+P+ GPGISER+ EA++ + ID C SVK
Sbjct: 272 PSLMALSSSMRLLQRHEFKINHGAWISSVKPEFGPGISERIEEAIRTSDEKIDHCRSVKS 331
Query: 358 XXXXXXXXXXXDFGILAIPTVPGPPPKLNTDPTTLAVFRAEAFSLLSIAGVSGFCQVSIP 417
+ G+L IPTVPGPPP L + L FR+ AFSLLSIAGVSGFCQVSIP
Sbjct: 332 ELITALSTLLGEKGVLVIPTVPGPPPHLQANVAALESFRSRAFSLLSIAGVSGFCQVSIP 391
Query: 418 LGMHDDLPLSISLLAKNGSDGFLLNVVQIL 447
LG+H++LP+S+SL+AK GSDGFLL++V L
Sbjct: 392 LGLHENLPVSVSLVAKYGSDGFLLSLVDSL 421
>AT5G09420.1 | Symbols: ATTOC64-V, MTOM64 | ATTOC64-V (ARABIDOPSIS
THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF
CHLOROPLASTS 64-V); amidase/ binding / carbon-nitrogen
ligase, with glutamine as amido-N-donor |
chr5:2928316-2931750 FORWARD
Length = 603
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/461 (41%), Positives = 254/461 (55%), Gaps = 36/461 (7%)
Query: 3 RNPDYGAFMEKFVL----KPTNLSDELPLNGLTFAVKDIFEVDGYVTGFGNPDWARTHLA 58
R D+GAF+++F L P + + L+GLTF++ D F+V Y+TGFG P W +TH A
Sbjct: 43 REEDFGAFLDRFELLPFPPPPPPAAKQSLSGLTFSISDAFDVKDYITGFGCPQWKKTHEA 102
Query: 59 ATSTAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXX 118
A TA V +L+ GATC+GKT+MDE+ + I GENKHYGTPINP PD VP
Sbjct: 103 AEKTAVVVTTLLKNGATCVGKTIMDELGFGIIGENKHYGTPINPLMPDNVPGGCSSGSAV 162
Query: 119 XXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFARNP 178
+LVDFSLG DT G VRVPA++C ILGFRPS G VS+ GV+P +QS +TVGWFA +P
Sbjct: 163 SVGAELVDFSLGIDTTGGVRVPAAFCGILGFRPSQGTVSSVGVLPNSQSLETVGWFASDP 222
Query: 179 VILNHVGRVLLQLPDVDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVI 238
+L VG LL L V R +I A+D F+LS IP + Q++ K++E L G
Sbjct: 223 SVLCQVGHALLNLSAVTHRRQRSLIFADDLFELSDIPKQKSVQVVRKAIENLSG------ 276
Query: 239 YELFWNPADSLGILRNIYMFCNGPSHVVKHLTLGDFVENKVPSLKHFMSKEIKEQGYDIX 298
+ P KH+ +G +V + VPSL F + K Q
Sbjct: 277 ---YKTP---------------------KHVNVGQYVASNVPSLAEFCEQSGKSQN-SAS 311
Query: 299 XXXXXXXXXXXXERYEFKNNHGEWVTTVEPDLGPGISERVWEAVKMTGGNIDACYSVKXX 358
+R+EFK NH EW T + LGP S V A+K +I + Y VK
Sbjct: 312 TLRALSSVMLAIQRHEFKTNHEEWWQTCKSFLGPRFSNDVVTALKSKNESIKSLYRVKNE 371
Query: 359 XXXXXXXXXXDFGILAIPTVPGPPPKLNTDPT-TLAVFRAEAFSLLSIAGVSGFCQVSIP 417
+ GIL IPTV PPP+LNT +L F ++L IA +SG CQV+IP
Sbjct: 372 MRATIQSLLKEDGILVIPTVADPPPRLNTKRNKSLNEFLDRTYALSCIASMSGCCQVTIP 431
Query: 418 LGMHDDLPLSISLLAKNGSDGFLLNVVQILYDTLQEQVAVS 458
LG H D P+S+SLL G D FLL+ +Y +LQ+Q ++
Sbjct: 432 LGEHGDRPISVSLLTYYGGDKFLLDTTLDVYASLQDQAKLA 472
>AT3G17970.1 | Symbols: atToc64-III | atToc64-III (Arabidopsis
thaliana translocon at the outer membrane of
chloroplasts 64-III); binding / carbon-nitrogen ligase,
with glutamine as amido-N-donor | chr3:6148030-6151794
FORWARD
Length = 589
Score = 347 bits (890), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 187/430 (43%), Positives = 253/430 (58%), Gaps = 33/430 (7%)
Query: 29 GLTFAVKDIFEVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMAYS 88
GLTFAV D+F++ GYVTGFG+PDW RTH AA+ST+P V ++ GATC+GKTV+DE A+S
Sbjct: 60 GLTFAVSDVFDITGYVTGFGHPDWVRTHEAASSTSPVVSTLVEGGATCVGKTVVDEFAFS 119
Query: 89 INGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSILG 148
I+GENKHY +P NP AP +P VDF+LG DT G VRVPA YC +LG
Sbjct: 120 ISGENKHYDSPTNPAAPTRIPGGACSGAAVAVATNAVDFALGIDTVGGVRVPAGYCGVLG 179
Query: 149 FRPSHGVVSTAGVIPMAQSFDTVGWFARNPVILNHVGRVLLQLPDVDLVRPSQIIIAEDC 208
F+ S+G +S G+IP++ S D+VGWFAR+P L VG VLLQLP P QII+A+DC
Sbjct: 180 FKSSYGAISNTGIIPVSSSLDSVGWFARDPNTLRRVGHVLLQLPFATQRNPRQIILADDC 239
Query: 209 FQLSSIPNGRVSQILVKSVEKLFGGQFSVIYELFWNPADSLGILRNIYMFCNGPSHVVKH 268
FQL IP R++Q++ KS EKLFG Q ++KH
Sbjct: 240 FQLLKIPVDRITQVVTKSAEKLFGRQ------------------------------LLKH 269
Query: 269 LTLGDFVENKVPSLKHF-MSKEIKEQGYDIXXXXXXXXXXXXXERYEFKNNHGEWVTTVE 327
L + E KVPSLK F +K I + +R+EF NHG+W+ TV+
Sbjct: 270 QNLETYFETKVPSLKEFARTKAIANT--KVSTSRLLANVMQLLQRHEFLQNHGDWINTVK 327
Query: 328 PDLGPGISERVWEAVKMTGGNIDACYSVKXXXXXXXXXXXXDFGILAIPTVPGPPPKLNT 387
P + P I +V E ++T + +++ D GIL IPT+P PPKL +
Sbjct: 328 PAIDPVILSQVCENPELTNEETENLNAIRNETRVAIGSLLKDDGILVIPTLPAVPPKLGS 387
Query: 388 DPTTLAVFRAEAFSLLSIAGVSGFCQVSIPLGMHDDLPLSISLLAKNGSDGFLLNVVQIL 447
T ++ A SLLSIA +SG CQV++PLG H+ P+S+S + ++G D FLL+ VQ +
Sbjct: 388 KEITSEDYQNRASSLLSIASISGCCQVTVPLGHHEKCPISVSFIGRHGGDRFLLDTVQTM 447
Query: 448 YDTLQEQVAV 457
Y +LQE ++
Sbjct: 448 YPSLQEYSSI 457
>AT3G25660.1 | Symbols: | glutamyl-tRNA(Gln) amidotransferase,
putative | chr3:9339640-9342044 REVERSE
Length = 537
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 26 PLNGLTFAVKDIFEVDGYVTGFGNPDWART----HLAATSTAPAVLAILREGATCIGKTV 81
PL G+ VKD + G P A + H A AV I G +GKT
Sbjct: 107 PLAGVLIGVKD------NICTQGMPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTN 160
Query: 82 MDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPA 141
MDE E + NP VP + SLG+DTGGSVR PA
Sbjct: 161 MDEFGMGSTTEASAFQVTANPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPA 220
Query: 142 SYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWF 174
S+C ++G +P++G VS G++ A S D +G F
Sbjct: 221 SFCGVVGLKPTYGRVSRFGLMAYASSLDVIGCF 253
>AT5G07360.1 | Symbols: | amidase family protein |
chr5:2326925-2330011 REVERSE
Length = 659
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 13/176 (7%)
Query: 10 FMEKFVLKPTNLSDEL--------PLNGLTFAVKDIFEVDGYVTGFGNPDWARTHLAATS 61
+ E+ K +D+L PL+G+ + +KDI V GY T +G+ + L +
Sbjct: 243 YTEELAYKQAKEADDLLSQGTYLGPLHGIPYGLKDIVAVPGYKTTWGSTSFKDQFLDIEA 302
Query: 62 TAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXX 121
L GA + K V MAY + G NP +
Sbjct: 303 WVYKRLKA--SGAVLVAKLVTGSMAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAASTS 357
Query: 122 XKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPMAQSFDTVGWFARN 177
+V F++G++T GS+ PA+ C I RP+ G V GV+ +++S D +G F R
Sbjct: 358 AGMVPFAIGSETAGSMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRT 413
>AT5G64440.1 | Symbols: AtFAAH | AtFAAH (Arabidopsis thaliana fatty
acid amide hydrolase); N-(long-chain-acyl)ethanolamine
deacylase/ amidase | chr5:25766229-25770260 FORWARD
Length = 607
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
Query: 27 LNGLTFAVKDIFEVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMA 86
L+G+ +KD + + T G W + + V + GA +GK M E+
Sbjct: 197 LDGIFVTIKDDIDCLPHPTN-GGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELG 255
Query: 87 YSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSI 146
G N +YGT NP P L +LGTD GGSVR+P++ C I
Sbjct: 256 MGTTGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGI 315
Query: 147 LGFRPSHGVVSTAGVIPMAQSFDTVGWFA 175
G + ++G G + + + +G A
Sbjct: 316 TGLKTTYGRTDMTGSLCEGGTVEIIGPLA 344