Jatropha Genome Database

JcCB0075081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075081.10 - phase: 0 
         (386 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G27450.2 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalon...   456   e-129
AT5G27450.1 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalon...   456   e-129

>AT5G27450.2 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalonate
           kinase | chr5:9691051-9692975 FORWARD
          Length = 378

 Score =  456 bits (1174), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/385 (62%), Positives = 280/385 (72%), Gaps = 10/385 (2%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTNVTLSFP--TSENDGTLKLQLKDMAL 58
           MEVKARAPGKIIL+GEHAVVHGSTAVA++I+LYT VTL FP  ++EN+  L LQLKD++L
Sbjct: 1   MEVKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVTLRFPLPSAENNDRLTLQLKDISL 60

Query: 59  EFSWPIGKIKEALP-NLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFL 117
           EFSW + +IKEA+P +      STP SCS E++KSI+ LVEEQN+P+ K+ L+SGI+ FL
Sbjct: 61  EFSWSLARIKEAIPYDSSTLCRSTPASCSEETLKSIAVLVEEQNLPKEKMWLSSGISTFL 120

Query: 118 WLYTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFG 177
           WLYT I GF PATVV+ S+                                   GW    
Sbjct: 121 WLYTRIIGFNPATVVINSELPYGSGLGSSAALCVALTAALLASSISEKTRG--NGWSSLD 178

Query: 178 ESELELLNKWAFEGEKIIHGKPSGIDNTVSTYGNMIKFRSGNLTRIKSNMLLKMLITNTR 237
           E+ LELLNKWAFEGEKIIHGKPSGIDNTVS YGNMIKF SG +TR++SNM L+MLITNTR
Sbjct: 179 ETNLELLNKWAFEGEKIIHGKPSGIDNTVSAYGNMIKFCSGEITRLQSNMPLRMLITNTR 238

Query: 238 VGRNTKALVAGVSERTLRHPNAMSFVFNAVDSISNELATIIQSPAPDELSITXXXXXXXX 297
           VGRNTKALV+GVS+R +RHP+AM  VFNAVDSIS ELA IIQS   DE S+T        
Sbjct: 239 VGRNTKALVSGVSQRAVRHPDAMKSVFNAVDSISKELAAIIQS--KDETSVTEKEERIKE 296

Query: 298 XXXXNQGLLQCMGVSHASIETVLRTTLKYKLASKLTGAGGGGCVLTLLPTLLSGTVVDKV 357
               NQGLL  MGVSH+SIE V+ TT+K+KL SKLTGAGGGGCVLTLLPT   GTVVDKV
Sbjct: 297 LMEMNQGLLLSMGVSHSSIEAVILTTVKHKLVSKLTGAGGGGCVLTLLPT---GTVVDKV 353

Query: 358 IAELESCGFQCLIAGIGGNGVEICF 382
           + ELES GFQC  A IGGNG +IC+
Sbjct: 354 VEELESSGFQCFTALIGGNGAQICY 378


>AT5G27450.1 | Symbols: MVK, MK | MK (MEVALONATE KINASE); mevalonate
           kinase | chr5:9691051-9692975 FORWARD
          Length = 378

 Score =  456 bits (1174), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/385 (62%), Positives = 280/385 (72%), Gaps = 10/385 (2%)

Query: 1   MEVKARAPGKIILSGEHAVVHGSTAVASSINLYTNVTLSFP--TSENDGTLKLQLKDMAL 58
           MEVKARAPGKIIL+GEHAVVHGSTAVA++I+LYT VTL FP  ++EN+  L LQLKD++L
Sbjct: 1   MEVKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVTLRFPLPSAENNDRLTLQLKDISL 60

Query: 59  EFSWPIGKIKEALP-NLGAPSASTPTSCSIESVKSISALVEEQNIPEAKIALASGIAAFL 117
           EFSW + +IKEA+P +      STP SCS E++KSI+ LVEEQN+P+ K+ L+SGI+ FL
Sbjct: 61  EFSWSLARIKEAIPYDSSTLCRSTPASCSEETLKSIAVLVEEQNLPKEKMWLSSGISTFL 120

Query: 118 WLYTSIQGFRPATVVVTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDKMHQGWLIFG 177
           WLYT I GF PATVV+ S+                                   GW    
Sbjct: 121 WLYTRIIGFNPATVVINSELPYGSGLGSSAALCVALTAALLASSISEKTRG--NGWSSLD 178

Query: 178 ESELELLNKWAFEGEKIIHGKPSGIDNTVSTYGNMIKFRSGNLTRIKSNMLLKMLITNTR 237
           E+ LELLNKWAFEGEKIIHGKPSGIDNTVS YGNMIKF SG +TR++SNM L+MLITNTR
Sbjct: 179 ETNLELLNKWAFEGEKIIHGKPSGIDNTVSAYGNMIKFCSGEITRLQSNMPLRMLITNTR 238

Query: 238 VGRNTKALVAGVSERTLRHPNAMSFVFNAVDSISNELATIIQSPAPDELSITXXXXXXXX 297
           VGRNTKALV+GVS+R +RHP+AM  VFNAVDSIS ELA IIQS   DE S+T        
Sbjct: 239 VGRNTKALVSGVSQRAVRHPDAMKSVFNAVDSISKELAAIIQS--KDETSVTEKEERIKE 296

Query: 298 XXXXNQGLLQCMGVSHASIETVLRTTLKYKLASKLTGAGGGGCVLTLLPTLLSGTVVDKV 357
               NQGLL  MGVSH+SIE V+ TT+K+KL SKLTGAGGGGCVLTLLPT   GTVVDKV
Sbjct: 297 LMEMNQGLLLSMGVSHSSIEAVILTTVKHKLVSKLTGAGGGGCVLTLLPT---GTVVDKV 353

Query: 358 IAELESCGFQCLIAGIGGNGVEICF 382
           + ELES GFQC  A IGGNG +IC+
Sbjct: 354 VEELESSGFQCFTALIGGNGAQICY 378