Jatropha Genome Database

JcCB0071481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0071481.10 + phase: 1 /partial
         (144 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G28770.3 | Symbols: BZO2H3 | BZO2H3; DNA binding / protein he...    73   8e-14
AT5G28770.2 | Symbols: BZO2H3 | BZO2H3; DNA binding / protein he...    72   8e-14
AT5G28770.1 | Symbols: BZO2H3, AtbZIP63 | BZO2H3; DNA binding / ...    59   1e-09

>AT5G28770.3 | Symbols: BZO2H3 | BZO2H3; DNA binding / protein
           heterodimerization/ transcription factor |
           chr5:10796907-10798147 REVERSE
          Length = 250

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 33/127 (25%)

Query: 19  NIPVDSKEYQAFLKSQLSLACAAVALSRAPFLKSQDSPARADSGSQASNTSQSGSHVPKG 78
           N+PVDS+EY+AFLKS+L+LACAAVA+ R  F+K QD+  R+D+G   +N S+  S     
Sbjct: 62  NVPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQASLASSK 119

Query: 79  AGNDLSRPQDTDANGLVGIHSSTQKKSGVPMKSTTSGSSREQSEDDEN-EGETEMNMKDP 137
           A                            PM S+   S  E S D+E  +GET MN   P
Sbjct: 120 A---------------------------TPMMSSAITSGSELSGDEEEADGETNMN---P 149

Query: 138 ADAKRVR 144
            + KRV+
Sbjct: 150 TNVKRVK 156


>AT5G28770.2 | Symbols: BZO2H3 | BZO2H3; DNA binding / protein
           heterodimerization/ transcription factor |
           chr5:10796648-10798147 REVERSE
          Length = 314

 Score = 72.4 bits (176), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 33/127 (25%)

Query: 19  NIPVDSKEYQAFLKSQLSLACAAVALSRAPFLKSQDSPARADSGSQASNTSQSGSHVPKG 78
           N+PVDS+EY+AFLKS+L+LACAAVA+ R  F+K QD+  R+D+G   +N S+  S     
Sbjct: 62  NVPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG--GANESEQASLASSK 119

Query: 79  AGNDLSRPQDTDANGLVGIHSSTQKKSGVPMKSTTSGSSREQSEDDEN-EGETEMNMKDP 137
           A                            PM S+   S  E S D+E  +GET MN   P
Sbjct: 120 A---------------------------TPMMSSAITSGSELSGDEEEADGETNMN---P 149

Query: 138 ADAKRVR 144
            + KRV+
Sbjct: 150 TNVKRVK 156


>AT5G28770.1 | Symbols: BZO2H3, AtbZIP63 | BZO2H3; DNA binding /
           protein heterodimerization/ transcription factor |
           chr5:10796648-10798147 REVERSE
          Length = 307

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 40/127 (31%)

Query: 19  NIPVDSKEYQAFLKSQLSLACAAVALSRAPFLKSQDSPARADSGSQASNTSQSGSHVPKG 78
           N+PVDS+EY+AFLKS+L+LACAAVA+ R       D+  R+D+G   +N S+  S     
Sbjct: 62  NVPVDSEEYRAFLKSKLNLACAAVAMKR-------DTSGRSDNG--GANESEQASLASSK 112

Query: 79  AGNDLSRPQDTDANGLVGIHSSTQKKSGVPMKSTTSGSSREQSEDDEN-EGETEMNMKDP 137
           A                            PM S+   S  E S D+E  +GET MN   P
Sbjct: 113 A---------------------------TPMMSSAITSGSELSGDEEEADGETNMN---P 142

Query: 138 ADAKRVR 144
            + KRV+
Sbjct: 143 TNVKRVK 149