Jatropha Genome Database

JcCB0071301.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0071301.10 - phase: 0 
         (198 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1 (LO...   347   4e-96
AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1 (LO...   347   4e-96
AT3G48780.1 | Symbols: ATSPT1, SPT1 | SPT1 (SERINE PALMITOYLTRAN...    52   2e-07
AT5G23670.2 | Symbols: LCB2 | LCB2; protein binding / serine C-p...    51   5e-07
AT5G23670.1 | Symbols: LCB2 | LCB2; protein binding / serine C-p...    51   5e-07

>AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1
           (LONG-CHAIN BASE1); protein binding / serine
           C-palmitoyltransferase | chr4:17218598-17221124 FORWARD
          Length = 482

 Score =  347 bits (889), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 158/197 (80%), Positives = 181/197 (91%)

Query: 1   MSSTVLHIMNSALEWVTVALDAPSARAVVFGVHIGGHLFVEGLLFVVILFLLTQKSYKPP 60
           M+S ++ + N+AL WVT+ L++PSAR V+FGV I GH FVEGLL VVI+ LLT+KSYKPP
Sbjct: 1   MASNLVEMFNAALNWVTMILESPSARVVLFGVPIRGHFFVEGLLGVVIIILLTRKSYKPP 60

Query: 61  KRPLTKKEIDELCNEWVPEPLIPAISEEMQHEPPALESAAGPHTKINGKEVVNFASANYL 120
           KRPLT++EIDELC+EWVPEPLIP I+E+M+HEPP LESAAGPHT +NGK+VVNFASANYL
Sbjct: 61  KRPLTEQEIDELCDEWVPEPLIPPITEDMKHEPPVLESAAGPHTTVNGKDVVNFASANYL 120

Query: 121 GLIGHEKLIESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPNSILYSYGLS 180
           GLIGHEKL+ESCTSALEKYGVGSCGPRGFYGTIDVHLDCE RI+KFLGTP+SILYSYGLS
Sbjct: 121 GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLGTPDSILYSYGLS 180

Query: 181 TTFSTIPCFCKKGDIIV 197
           T FSTIPCFCKKGD+IV
Sbjct: 181 TMFSTIPCFCKKGDVIV 197


>AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | ATLCB1
           (LONG-CHAIN BASE1); protein binding / serine
           C-palmitoyltransferase | chr4:17218598-17221124 FORWARD
          Length = 482

 Score =  347 bits (889), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 158/197 (80%), Positives = 181/197 (91%)

Query: 1   MSSTVLHIMNSALEWVTVALDAPSARAVVFGVHIGGHLFVEGLLFVVILFLLTQKSYKPP 60
           M+S ++ + N+AL WVT+ L++PSAR V+FGV I GH FVEGLL VVI+ LLT+KSYKPP
Sbjct: 1   MASNLVEMFNAALNWVTMILESPSARVVLFGVPIRGHFFVEGLLGVVIIILLTRKSYKPP 60

Query: 61  KRPLTKKEIDELCNEWVPEPLIPAISEEMQHEPPALESAAGPHTKINGKEVVNFASANYL 120
           KRPLT++EIDELC+EWVPEPLIP I+E+M+HEPP LESAAGPHT +NGK+VVNFASANYL
Sbjct: 61  KRPLTEQEIDELCDEWVPEPLIPPITEDMKHEPPVLESAAGPHTTVNGKDVVNFASANYL 120

Query: 121 GLIGHEKLIESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPNSILYSYGLS 180
           GLIGHEKL+ESCTSALEKYGVGSCGPRGFYGTIDVHLDCE RI+KFLGTP+SILYSYGLS
Sbjct: 121 GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLGTPDSILYSYGLS 180

Query: 181 TTFSTIPCFCKKGDIIV 197
           T FSTIPCFCKKGD+IV
Sbjct: 181 TMFSTIPCFCKKGDVIV 197


>AT3G48780.1 | Symbols: ATSPT1, SPT1 | SPT1 (SERINE
           PALMITOYLTRANSFERASE 1); serine C-palmitoyltransferase |
           chr3:18089346-18092276 FORWARD
          Length = 489

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 112 VNFASANYLGLIGHEKLIESCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167
           +N  S NYLG    +   E CT     +L+K+   +C  R   GT  VH + E  +AK++
Sbjct: 103 LNLGSYNYLGFGSFD---EYCTPRVIESLKKFSASTCSSRVDAGTTSVHAELEDCVAKYV 159

Query: 168 GTPNSILYSYGLSTTFSTIPCFCKKGDIIV 197
           G P ++++  G +T  + IP    KG +I+
Sbjct: 160 GQPAAVIFGMGYATNSAIIPVLIGKGGLII 189


>AT5G23670.2 | Symbols: LCB2 | LCB2; protein binding / serine
           C-palmitoyltransferase | chr5:7981889-7985037 FORWARD
          Length = 489

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 112 VNFASANYLGLIGHEKLIESCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167
           +N  S NYLG    +   E CT     +L+K+   +C  R   GT  VH + E  + +F+
Sbjct: 103 LNLGSYNYLGFGSFD---EYCTPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFV 159

Query: 168 GTPNSILYSYGLSTTFSTIPCFCKKGDIIV 197
           G P ++++  G +T  + IP    KG +I+
Sbjct: 160 GKPAAVVFGMGYATNSAIIPVLIGKGGLII 189


>AT5G23670.1 | Symbols: LCB2 | LCB2; protein binding / serine
           C-palmitoyltransferase | chr5:7981889-7985037 FORWARD
          Length = 489

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 112 VNFASANYLGLIGHEKLIESCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL 167
           +N  S NYLG    +   E CT     +L+K+   +C  R   GT  VH + E  + +F+
Sbjct: 103 LNLGSYNYLGFGSFD---EYCTPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFV 159

Query: 168 GTPNSILYSYGLSTTFSTIPCFCKKGDIIV 197
           G P ++++  G +T  + IP    KG +I+
Sbjct: 160 GKPAAVVFGMGYATNSAIIPVLIGKGGLII 189