Jatropha Genome Database
- JcCB0069051.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0069051.10 - phase: 0
(114 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33355.2 | Symbols: | lipid binding | chr4:16067097-16067450... 94 1e-20
AT4G33355.1 | Symbols: | lipid binding | chr4:16067097-16067568... 93 3e-20
AT3G51590.1 | Symbols: LTP12 | LTP12 (LIPID TRANSFER PROTEIN 12)... 82 5e-17
AT2G15050.3 | Symbols: LTP | LTP; lipid binding | chr2:6518888-6... 75 7e-15
AT2G15050.1 | Symbols: LTP | LTP; lipid binding | chr2:6518888-6... 75 9e-15
AT2G38540.1 | Symbols: LP1, LTP1, ATLTP1 | LP1; calmodulin bindi... 74 1e-14
AT5G59320.1 | Symbols: LTP3 | LTP3 (LIPID TRANSFER PROTEIN 3); l... 74 2e-14
AT2G15050.2 | Symbols: LTP | LTP; lipid binding | chr2:6518888-6... 74 2e-14
AT5G59310.1 | Symbols: LTP4 | LTP4 (LIPID TRANSFER PROTEIN 4); l... 72 5e-14
AT3G51600.1 | Symbols: LTP5 | LTP5 (Lipid transfer protein 5); l... 72 1e-13
AT2G38530.1 | Symbols: LTP2, LP2 | LTP2 (LIPID TRANSFER PROTEIN ... 69 5e-13
AT5G01870.1 | Symbols: | lipid transfer protein, putative | chr... 52 7e-08
AT2G18370.1 | Symbols: | protease inhibitor/seed storage/lipid ... 52 1e-07
AT3G08770.1 | Symbols: LTP6 | LTP6; lipid binding | chr3:2664349... 50 2e-07
>AT4G33355.2 | Symbols: | lipid binding | chr4:16067097-16067450
FORWARD
Length = 117
Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 18 MAMPGEAVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVK 77
+A GEA+ C QVN LA C+P+L A PS CC G+ +LKA AP ADR+ AC+C+K
Sbjct: 22 IAYHGEAIACPQVNMYLAQCLPYLK-AGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLK 80
Query: 78 AAASHYPNINEDSASSLPKKCAVEVNIPISKNTNCQK 114
+ A+ P IN+D A LP KC V + +P SK +C +
Sbjct: 81 SVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNR 117
>AT4G33355.1 | Symbols: | lipid binding | chr4:16067097-16067568
FORWARD
Length = 119
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 18 MAMPGEAVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVK 77
+A GEA+ C QVN LA C+P+L A PS CC G+ +LKA AP ADR+ AC+C+K
Sbjct: 22 IAYHGEAIACPQVNMYLAQCLPYLK-AGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLK 80
Query: 78 AAASHYPNINEDSASSLPKKCAVEVNIPISKNTNC 112
+ A+ P IN+D A LP KC V + +P SK +C
Sbjct: 81 SVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDC 115
>AT3G51590.1 | Symbols: LTP12 | LTP12 (LIPID TRANSFER PROTEIN 12);
lipid binding | chr3:19135828-19136654 REVERSE
Length = 119
Score = 82.4 bits (202), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 18 MAMPGEA-VDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCV 76
MA P E+ + CG V S LA C+ +LT + PS CC GVK+L LA TT DR+ C+C+
Sbjct: 18 MASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECL 76
Query: 77 KAAASHYPNINEDSASSLPKKCAVEVNIPISKNTNC 112
K A +N D ++LP C V + PIS +TNC
Sbjct: 77 KLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNC 112
>AT2G15050.3 | Symbols: LTP | LTP; lipid binding |
chr2:6518888-6519888 FORWARD
Length = 122
Score = 75.5 bits (184), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 24 AVDCGQVNSALASCIPFLT-GADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
A+ CG+VNS L C +LT G T+P CC GV+ L + TT DRR AC C+K AA +
Sbjct: 26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARN 85
Query: 83 Y-PNINEDSASSLPKKCAVEV--NIPISKNTNC 112
P +N D A+ +P++C +++ + I NT C
Sbjct: 86 VGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKC 118
>AT2G15050.1 | Symbols: LTP | LTP; lipid binding |
chr2:6518888-6519259 FORWARD
Length = 123
Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 24 AVDCGQVNSALASCIPFLT-GADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
A+ CG+VNS L C +LT G T+P CC GV+ L + TT DRR AC C+K AA +
Sbjct: 26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARN 85
Query: 83 Y-PNINEDSASSLPKKCAVEV--NIPISKNTNCQ 113
P +N D A+ +P++C +++ + I NT C
Sbjct: 86 VGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
>AT2G38540.1 | Symbols: LP1, LTP1, ATLTP1 | LP1; calmodulin binding
| chr2:16130418-16130893 FORWARD
Length = 118
Score = 74.3 bits (181), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 24 AVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
A+ CG VNS LA+CI ++ P A CC GVKNL ++A TT DR+ AC+C++ AA
Sbjct: 26 ALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARAL 84
Query: 84 -PNINEDSASSLPKKCAVEVNIPISKNTNCQ 113
+N A+ +PK C V + IS +TNC+
Sbjct: 85 GSGLNAGRAAGIPKACGVNIPYKISTSTNCK 115
>AT5G59320.1 | Symbols: LTP3 | LTP3 (LIPID TRANSFER PROTEIN 3);
lipid binding | chr5:23929051-23929492 FORWARD
Length = 115
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 24 AVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
A+ CG V +LA C +L+ P +CC GVK L ++A TT DR+ AC C+++ A
Sbjct: 24 AISCGTVAGSLAPCATYLSKGGLVP-PSCCAGVKTLNSMAKTTPDRQQACRCIQSTAKSI 82
Query: 84 PNINEDSASSLPKKCAVEVNIPISKNTNC 112
+N AS LP KC V + PIS +TNC
Sbjct: 83 SGLNPSLASGLPGKCGVSIPYPISMSTNC 111
>AT2G15050.2 | Symbols: LTP | LTP; lipid binding |
chr2:6518888-6519888 FORWARD
Length = 115
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 24 AVDCGQVNSALASCIPFLT-GADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
A+ CG+VNS L C +LT G T+P CC GV+ L + TT DRR AC C+K AA +
Sbjct: 26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARN 85
Query: 83 Y-PNINEDSASSLPKKCAVEV 102
P +N D A+ +P++C +++
Sbjct: 86 VGPGLNADRAAGIPRRCGIKI 106
>AT5G59310.1 | Symbols: LTP4 | LTP4 (LIPID TRANSFER PROTEIN 4);
lipid binding | chr5:23925296-23925772 REVERSE
Length = 112
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 24 AVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
A+ CG V S+L+ C+ +L+ P CC GVK L +A TT DR+ AC C+++AA
Sbjct: 24 AITCGTVASSLSPCLGYLSKGGVVPPP-CCAGVKKLNGMAQTTPDRQQACRCLQSAAK-- 80
Query: 84 PNINEDSASSLPKKCAVEVNIPISKNTNC 112
+N AS LP KC V + PIS +TNC
Sbjct: 81 -GVNPSLASGLPGKCGVSIPYPISTSTNC 108
>AT3G51600.1 | Symbols: LTP5 | LTP5 (Lipid transfer protein 5);
lipid transporter | chr3:19138661-19139124 REVERSE
Length = 118
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 24 AVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
A+ CG V +L C +LT P CC GV+ L +LA TT DR+ AC C++ AA
Sbjct: 26 AISCGAVTGSLGQCYNYLTRGGFIPRG-CCSGVQRLNSLARTTRDRQQACRCIQGAARAL 84
Query: 84 -PNINEDSASSLPKKCAVEVNIPISKNTNC 112
+N A+ LP C V ++ PIS TNC
Sbjct: 85 GSRLNAGRAARLPGACRVRISYPISARTNC 114
>AT2G38530.1 | Symbols: LTP2, LP2 | LTP2 (LIPID TRANSFER PROTEIN 2);
lipid binding | chr2:16128481-16128948 FORWARD
Length = 118
Score = 68.9 bits (167), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 25 VDCGQVNSALASCIPFLTGADTAP-SAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
+ CG VN LA CI +LT AP + CC GV NLK +A TT DR+ AC C+++AA
Sbjct: 27 MSCGTVNGNLAGCIAYLT--RGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAV 84
Query: 84 -PNINEDSASSLPKKCAVEVNIPISKNTNC 112
P +N A+ LP C V + IS +TNC
Sbjct: 85 GPGLNTARAAGLPSACKVNIPYKISASTNC 114
>AT5G01870.1 | Symbols: | lipid transfer protein, putative |
chr5:337234-337678 FORWARD
Length = 116
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 24 AVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH- 82
A+ C V + L C+ ++ P + CC G++ L A + +D++ C C+K+
Sbjct: 23 AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRV 81
Query: 83 -YPNINEDSASSLPKKCAVEVNIPISKNTNC 112
Y +I A++LP KC V++ I +TNC
Sbjct: 82 SYSSIYLKKAAALPGKCGVKLPYKIDPSTNC 112
>AT2G18370.1 | Symbols: | protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein |
chr2:7980687-7981475 FORWARD
Length = 116
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 23 EAVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASH 82
A+ C V L C+ +LT P CC GVK+L A T+AD++AAC C+K+ A+
Sbjct: 24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANS 83
Query: 83 YPNINEDSASSLPKKCAVEVNIPISKNTNC 112
+ + A +L C + + S +C
Sbjct: 84 V-TVKPELAQALASNCGASLPVDASPTVDC 112
>AT3G08770.1 | Symbols: LTP6 | LTP6; lipid binding |
chr3:2664349-2664784 REVERSE
Length = 113
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 24 AVDCGQVNSALASCIPFLTGADTAPSAACCGGVKNLKALAPTTADRRAACDCVKAAASHY 83
AV C V + L C+ ++T P+ CC G+ LK+ A T+ DR+ C C+K+A
Sbjct: 20 AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGL 78
Query: 84 ---PNINEDSASSLPKKCAVEVNIPISKNTNC 112
P ++ A LP KC V++ S +T+C
Sbjct: 79 TLSPRTIQN-ALELPSKCGVDLPYKFSPSTDC 109