Jatropha Genome Database
- JcCB0068881.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0068881.10 + phase: 1 /partial
(522 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10570.1 | Symbols: UBP9 | UBP9 (UBIQUITIN-SPECIFIC PROTEASE ... 665 0.0
AT4G10590.1 | Symbols: UBP10 | ubiquitin carboxyl-terminal hydro... 664 0.0
AT4G10590.2 | Symbols: UBP10 | ubiquitin carboxyl-terminal hydro... 664 0.0
AT1G32850.1 | Symbols: UBP11 | UBP11 (UBIQUITIN-SPECIFIC PROTEAS... 625 e-179
AT5G22030.1 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE ... 487 e-138
AT5G22030.2 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE ... 487 e-138
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | UBP5 (UBIQUITIN-SP... 486 e-137
AT4G31670.1 | Symbols: UBP18 | UBP18 (UBIQUITIN-SPECIFIC PROTEAS... 88 1e-17
AT2G24640.1 | Symbols: UBP19 | UBP19 (UBIQUITIN-SPECIFIC PROTEAS... 87 2e-17
AT5G46740.1 | Symbols: UBP21 | UBP21 (UBIQUITIN-SPECIFIC PROTEAS... 85 1e-16
AT1G17110.1 | Symbols: UBP15 | UBP15 (UBIQUITIN-SPECIFIC PROTEAS... 82 8e-16
AT5G10790.1 | Symbols: UBP22 | UBP22 (UBIQUITIN-SPECIFIC PROTEAS... 82 8e-16
AT4G24560.1 | Symbols: UBP16 | UBP16 (UBIQUITIN-SPECIFIC PROTEAS... 80 3e-15
AT5G57990.1 | Symbols: UBP23 | UBP23 (UBIQUITIN-SPECIFIC PROTEAS... 79 5e-15
AT4G17895.1 | Symbols: UBP20 | UBP20 (UBIQUITIN-SPECIFIC PROTEAS... 79 9e-15
AT5G65450.1 | Symbols: UBP17 | UBP17 (UBIQUITIN-SPECIFIC PROTEAS... 75 8e-14
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ATUBP3 (ARABIDOPSIS THALIA... 73 4e-13
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ATUBP4 (ARABIDOPSIS THALIA... 73 5e-13
AT4G30890.2 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEAS... 72 1e-12
AT4G30890.1 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEAS... 72 1e-12
AT2G32780.1 | Symbols: UBP1, ATUBP1 | UBP1 (UBIQUITIN-SPECIFIC P... 69 7e-12
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | UBP26 (UBIQUITIN-... 69 1e-11
AT1G04860.1 | Symbols: UBP2, ATUBP2 | UBP2 (UBIQUITIN-SPECIFIC P... 66 6e-11
AT3G14400.1 | Symbols: UBP25 | UBP25 (UBIQUITIN-SPECIFIC PROTEAS... 61 2e-09
AT5G06600.2 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 58 1e-08
AT5G06600.1 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 58 1e-08
AT5G06600.3 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEAS... 58 2e-08
AT3G11910.1 | Symbols: UBP13 | UBP13 (UBIQUITIN-SPECIFIC PROTEAS... 58 2e-08
AT4G39370.1 | Symbols: UBP27 | UBP27 (UBIQUITIN-SPECIFIC PROTEAS... 55 9e-08
AT4G22350.1 | Symbols: | ubiquitin carboxyl-terminal hydrolase ... 52 6e-07
AT4G22285.1 | Symbols: | ubiquitin thiolesterase/ zinc ion bind... 52 7e-07
>AT4G10570.1 | Symbols: UBP9 | UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9);
cysteine-type endopeptidase/ ubiquitin thiolesterase |
chr4:6523657-6528058 REVERSE
Length = 923
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/518 (64%), Positives = 407/518 (78%), Gaps = 14/518 (2%)
Query: 3 CLLLDGLHEDLNRVKQKPYIEMKDWDGRPDEEVADECWRNHKARNDSVIVDVCQGQYKST 62
LLDGLHEDLN+VK+KPYIE+KD D RPD+EVA+E W HKARNDSVIVDVCQGQYKST
Sbjct: 400 AFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKST 459
Query: 63 LVCPVCSKISITFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTVSVLKNGHCRDL 122
LVCPVC KISITFDPFMYLS+PLPST+TRSMT+TVFY DGS LPMPYTV V K G RDL
Sbjct: 460 LVCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMPYTVIVPKQGSIRDL 519
Query: 123 IQALVAACCLRSDESLLLAEVYDHRIYRLFENPFESLTSIKDEEYIVAYRLSQ--KGIGK 180
I AL ACCL DESLLLAEVYDH+I+R FE P +SL++IKD+E+IVAYRL+Q KG K
Sbjct: 520 ITALGTACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHIVAYRLNQIPKGSRK 579
Query: 181 RKLEIVH--QERSAPDFVKGSGFKDFGAPLVTYLDDDPPSGADIELAASRLLSPLIRTCS 238
KLEI+H QER+ D V+GS K FG P VTY++ +P SG DI+ S LSPL + +
Sbjct: 580 AKLEILHGGQERAVLDSVRGSDVKLFGTPFVTYVNTEPLSGTDIDAVISGFLSPLHKVHA 639
Query: 239 SNAVHCGKENGFLSESNGETSNCCNGHAELGDRSMDTMELEDTSGQELSFQLFLTDDRYS 298
+ +H G +NG L+++ + ++ G S E+++ S +ELSF++FLTD+R
Sbjct: 640 PSKIHNGSDNGHLADATVDQAS--------GILSSPDTEIDNASDRELSFRIFLTDERGL 691
Query: 299 SRKPIFKDSVIKTGANHIKVFLEWTENEHKLYDPSYMKDLPVVYHKTGFTAKKTRQEGVS 358
+ KP+ +S I G +V +EW E EH+ YD SY+ DLP V HKT F+AKKTRQE +S
Sbjct: 692 NIKPLQSESSISPGTV-TRVLVEWNEGEHERYDSSYLSDLPEV-HKTSFSAKKTRQESIS 749
Query: 359 LFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKNK 418
LFSCLEAFL EEPLGPDDMW+CP CK+HRQA KKLDLW LP+ILVFHLKRF+YSRYLKNK
Sbjct: 750 LFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKNK 809
Query: 419 LDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYGGLGGGHYTAFAKLIDDKRWYNF 478
+DTFV+FP+H+LDLSK+VK K+G+SY+YELYA+SNHYGGLGGGHYTA+AKLIDD +WY+F
Sbjct: 810 IDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNKWYHF 869
Query: 479 DDSRVSPVNEADIKTSAAYVLFYQRVETATKVGLGETS 516
DDS VS VNE++I+ SAAYVLFY+RV + T+ E S
Sbjct: 870 DDSHVSSVNESEIRNSAAYVLFYRRVRSETETQTAEMS 907
>AT4G10590.1 | Symbols: UBP10 | ubiquitin carboxyl-terminal
hydrolase family protein | chr4:6538919-6543272 REVERSE
Length = 910
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/519 (65%), Positives = 406/519 (78%), Gaps = 16/519 (3%)
Query: 3 CLLLDGLHEDLNRVKQKPYIEMKDWDGRPDEEVADECWRNHKARNDSVIVDVCQGQYKST 62
LLDGLHEDLN+VK+KPYIE+KD D RPD+EVA+E W HKARNDSVIVDVCQGQYKST
Sbjct: 399 AFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKST 458
Query: 63 LVCPVCSKISITFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTVSVLKNGHCRDL 122
LVCP C KISITFDPFMYLS+PLPST+TRSMTVTVFY DGS LPMPYTV V KNG RDL
Sbjct: 459 LVCPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDL 518
Query: 123 IQALVAACCLRSDESLLLAEVYDHRIYRLFENPFESLTSIKDEEYIVAYRLSQ--KGIGK 180
I AL AC L DESLLLAEVYDH+I++ FENP +SL+SIKD+E+IVAYRL+Q KG GK
Sbjct: 519 ITALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGK 578
Query: 181 RKLEIVH--QERSAPDFVKGSGFKDFGAPLVTYLDDDPPSGADIELAASRLLSPLIRTCS 238
KLEI+H Q+R + V+G K FG P VTY++ +P SGADI+ SR LSPL + +
Sbjct: 579 AKLEILHGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHA 638
Query: 239 SNAVHCGKENGFLSESN-GETSNCCNGHAELGDRSMDTMELEDTSGQELSFQLFLTDDRY 297
+ +H G ENG L ++ E S + S DT E++D S +ELSF++FLTD+R
Sbjct: 639 PSKIHNGSENGHLPDATVDEASEILS--------SPDT-EIDDASDRELSFRIFLTDERG 689
Query: 298 SSRKPIFKDSVIKTGANHIKVFLEWTENEHKLYDPSYMKDLPVVYHKTGFTAKKTRQEGV 357
+ KP+ +S I G +V +EW E EH+ YD SY+ DLP V HKT F+AKKTRQE +
Sbjct: 690 LNFKPLQSESSISLGIA-TRVLVEWNEGEHERYDSSYLSDLPEV-HKTSFSAKKTRQESI 747
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
SLFSCLEAFL EEPLGPDDMW+CP CK+HRQA KKLDLW LP+ILVFHLKRF+YSRYLKN
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 418 KLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYGGLGGGHYTAFAKLIDDKRWYN 477
K+DTFV+FP+H+LDLSK+VK K+ +SY+YELYA+SNHYGGLGGGHYTA+AKLIDD WY+
Sbjct: 808 KIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYH 867
Query: 478 FDDSRVSPVNEADIKTSAAYVLFYQRVETATKVGLGETS 516
FDDS VS VNE++IK SAAYVLFY+RV + T+ E S
Sbjct: 868 FDDSHVSSVNESEIKNSAAYVLFYRRVRSETETQTVEMS 906
>AT4G10590.2 | Symbols: UBP10 | ubiquitin carboxyl-terminal
hydrolase family protein | chr4:6538919-6543272 REVERSE
Length = 910
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/519 (65%), Positives = 406/519 (78%), Gaps = 16/519 (3%)
Query: 3 CLLLDGLHEDLNRVKQKPYIEMKDWDGRPDEEVADECWRNHKARNDSVIVDVCQGQYKST 62
LLDGLHEDLN+VK+KPYIE+KD D RPD+EVA+E W HKARNDSVIVDVCQGQYKST
Sbjct: 399 AFLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKST 458
Query: 63 LVCPVCSKISITFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTVSVLKNGHCRDL 122
LVCP C KISITFDPFMYLS+PLPST+TRSMTVTVFY DGS LPMPYTV V KNG RDL
Sbjct: 459 LVCPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDL 518
Query: 123 IQALVAACCLRSDESLLLAEVYDHRIYRLFENPFESLTSIKDEEYIVAYRLSQ--KGIGK 180
I AL AC L DESLLLAEVYDH+I++ FENP +SL+SIKD+E+IVAYRL+Q KG GK
Sbjct: 519 ITALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGK 578
Query: 181 RKLEIVH--QERSAPDFVKGSGFKDFGAPLVTYLDDDPPSGADIELAASRLLSPLIRTCS 238
KLEI+H Q+R + V+G K FG P VTY++ +P SGADI+ SR LSPL + +
Sbjct: 579 AKLEILHGGQKRPILESVRGRDVKLFGTPFVTYVNTEPLSGADIDAVLSRFLSPLHKVHA 638
Query: 239 SNAVHCGKENGFLSESN-GETSNCCNGHAELGDRSMDTMELEDTSGQELSFQLFLTDDRY 297
+ +H G ENG L ++ E S + S DT E++D S +ELSF++FLTD+R
Sbjct: 639 PSKIHNGSENGHLPDATVDEASEILS--------SPDT-EIDDASDRELSFRIFLTDERG 689
Query: 298 SSRKPIFKDSVIKTGANHIKVFLEWTENEHKLYDPSYMKDLPVVYHKTGFTAKKTRQEGV 357
+ KP+ +S I G +V +EW E EH+ YD SY+ DLP V HKT F+AKKTRQE +
Sbjct: 690 LNFKPLQSESSISLGIA-TRVLVEWNEGEHERYDSSYLSDLPEV-HKTSFSAKKTRQESI 747
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
SLFSCLEAFL EEPLGPDDMW+CP CK+HRQA KKLDLW LP+ILVFHLKRF+YSRYLKN
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 418 KLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYGGLGGGHYTAFAKLIDDKRWYN 477
K+DTFV+FP+H+LDLSK+VK K+ +SY+YELYA+SNHYGGLGGGHYTA+AKLIDD WY+
Sbjct: 808 KIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGGHYTAYAKLIDDNEWYH 867
Query: 478 FDDSRVSPVNEADIKTSAAYVLFYQRVETATKVGLGETS 516
FDDS VS VNE++IK SAAYVLFY+RV + T+ E S
Sbjct: 868 FDDSHVSSVNESEIKNSAAYVLFYRRVRSETETQTVEMS 906
>AT1G32850.1 | Symbols: UBP11 | UBP11 (UBIQUITIN-SPECIFIC PROTEASE
11); cysteine-type endopeptidase/ ubiquitin
thiolesterase | chr1:11902629-11906900 FORWARD
Length = 892
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/512 (64%), Positives = 387/512 (75%), Gaps = 26/512 (5%)
Query: 3 CLLLDGLHEDLNRVKQKPYIEMKDWDGRPDEEVADECWRNHKARNDSVIVDVCQGQYKST 62
LLDGLHEDLN+VK+KPYIE KD DGRPD+EVA+E W+ HKARNDSVIVDV QGQYKST
Sbjct: 397 AFLLDGLHEDLNKVKRKPYIEAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKST 456
Query: 63 LVCPVCSKISITFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTVSVLKNGHCRDL 122
LVCP C KISITFDPFMYLSLPLPS+ TRSMTVTVFYGDGS LPMPYTV+V K+G CRDL
Sbjct: 457 LVCPDCGKISITFDPFMYLSLPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGSCRDL 516
Query: 123 IQALVAACCLRSDESLLLAEVYDHRIYRLFENPFESLTSIKDEEYIVAYRLSQ--KGIGK 180
AL ACCL +DESLLLAEVYDH++++ +ENP E L IKD E+IVAYR Q KG GK
Sbjct: 517 SNALGTACCLDNDESLLLAEVYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHKGPGK 576
Query: 181 RKLEIVH--QERSAPDFVKGSGFKDFGAPLVTYLDDDPPSGADIELAASRLLSPLIRTCS 238
KLEI+H QE+S+ G K FG PLVTY++ +P SG DI + S LLSPL R
Sbjct: 577 VKLEILHGEQEKSS-----DRGPKCFGTPLVTYINKEPLSGTDIATSISGLLSPLRRVHM 631
Query: 239 SNAVHCGKENGFLSESNGETSNCCNGHAELGDRSMDTMELEDTSGQELSFQLFLTDDRYS 298
S V+ G ENG + + + + + E DR + L D SF L
Sbjct: 632 SCVVNSGNENGHVPDESSRSILSRDTETEDNDRELSLSLLRDY----YSFNL-------- 679
Query: 299 SRKPIFKDSVIKTGANHIKVFLEWTENEHKLYDPSYMKDLPVVYHKTGFTAKKTRQEGVS 358
+P+ DSV+ G+ KV ++W E EH+ YD SY+ DLP V HK AKKT QEG+S
Sbjct: 680 --QPLESDSVVNPGSV-TKVLVKWNEKEHEKYDSSYLNDLPKV-HKN-VLAKKTMQEGIS 734
Query: 359 LFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKNK 418
LFSCLEAFL EEPLGPDDMWYCPGCK+HRQA KKLDLW LP+ILVFHLKRF+YSRY KNK
Sbjct: 735 LFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKNK 794
Query: 419 LDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYGGLGGGHYTAFAKLIDDKRWYNF 478
+DT V+F IH+LDLSK+VK +DG+SY+YELYAISNHYGGLGGGHYTA+AKL+D+ +WYNF
Sbjct: 795 IDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGGHYTAYAKLMDETKWYNF 854
Query: 479 DDSRVSPVNEADIKTSAAYVLFYQRVETATKV 510
DDSRVS VNE++IKTSAAYVLFYQRV++ ++
Sbjct: 855 DDSRVSAVNESEIKTSAAYVLFYQRVKSDSET 886
>AT5G22030.1 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8);
ubiquitin thiolesterase/ ubiquitin-specific protease |
chr5:7290155-7296344 REVERSE
Length = 913
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/516 (51%), Positives = 330/516 (63%), Gaps = 35/516 (6%)
Query: 3 CLLLDGLHEDLNRVKQKPYIEMKDWDGRPDEEVADECWRNHKARNDSVIVDVCQGQYKST 62
LLDGLHEDLNRVK KPY+E KD DGRPD EVADE WRNH ARNDS+IVDVCQGQYKST
Sbjct: 417 AFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKST 476
Query: 63 LVCPVCSKISITFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTVSVLKNGHCRDL 122
LVCP+C K+S+ FDPFMYLSLPLP T R+M +TV DGS LP+P TV+V K G DL
Sbjct: 477 LVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSSLPIPLTVNVPKFGKFEDL 536
Query: 123 IQALVAACCLRSDESLLLAEVYDHRIYRLFENPFESLTSIKDEEYIVAYRLSQKGIGKRK 182
+ALV AC L +E+LL+ EVY++RI R E P +SLT I+D + +V YRL +K
Sbjct: 537 HKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDKLVVYRL-KKDANNSP 595
Query: 183 LEIVHQERSAPDFVKGSG---FKDFGAPLVTYLDDDPPSGADIELAASRLLSPLIRTCSS 239
L + ++ F+ G +K FG PLV+ L D +G+D+E +LLS
Sbjct: 596 LIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRL-CDVENGSDVENLYLKLLSSFKMPTE- 653
Query: 240 NAVHCGKENGFLSESNGETSNCCNGHAELGDRSMDTMELEDTSGQELS----------FQ 289
F +E+ N A + T +EDT+ ++ +
Sbjct: 654 ----------FFTEN---LENPTEEEATDKTDTDGTTSVEDTNSTDVKETTESLPDPVLR 700
Query: 290 LFLTDDRYSSRKPIFKDSVIKTGANHIKVFLEWTENEHKLYDPSYMKDLPVVYHKTGFTA 349
L+LTDDR +S + + + V W E +YD + LP V K+G
Sbjct: 701 LYLTDDRGNSIEAEMLKEKPVNKSKRLNVLARWPVKELDVYDTCLLSSLPEV-SKSG--- 756
Query: 350 KKTRQEGVSLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRF 409
K QE VSLF CLEAFLTEEPLGPDDMWYCPGCK+HRQA KKLDLW LPEILV HLKRF
Sbjct: 757 TKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRF 816
Query: 410 SYSRYLKNKLDTFVDFPIHNLDLSKFVKRKDGK-SYVYELYAISNHYGGLGGGHYTAFAK 468
SYSR++KNKL+ +VDFP+ NLDLS ++ K+G+ +Y Y LYAISNHYG +GGGHYTA+
Sbjct: 817 SYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYVH 876
Query: 469 LIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRV 504
D RWY+FDDS V +++ IKTSAAYVLFY+R+
Sbjct: 877 HGGD-RWYDFDDSHVHQISQEKIKTSAAYVLFYKRL 911
>AT5G22030.2 | Symbols: UBP8 | UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8);
ubiquitin thiolesterase/ ubiquitin-specific protease |
chr5:7290155-7296344 REVERSE
Length = 913
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 265/516 (51%), Positives = 330/516 (63%), Gaps = 35/516 (6%)
Query: 3 CLLLDGLHEDLNRVKQKPYIEMKDWDGRPDEEVADECWRNHKARNDSVIVDVCQGQYKST 62
LLDGLHEDLNRVK KPY+E KD DGRPD EVADE WRNH ARNDS+IVDVCQGQYKST
Sbjct: 417 AFLLDGLHEDLNRVKNKPYVEAKDGDGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKST 476
Query: 63 LVCPVCSKISITFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTVSVLKNGHCRDL 122
LVCP+C K+S+ FDPFMYLSLPLP T R+M +TV DGS LP+P TV+V K G DL
Sbjct: 477 LVCPICKKVSVMFDPFMYLSLPLPCTSMRTMDLTVMSADGSSLPIPLTVNVPKFGKFEDL 536
Query: 123 IQALVAACCLRSDESLLLAEVYDHRIYRLFENPFESLTSIKDEEYIVAYRLSQKGIGKRK 182
+ALV AC L +E+LL+ EVY++RI R E P +SLT I+D + +V YRL +K
Sbjct: 537 HKALVTACSLPEEETLLVTEVYNNRIIRFLEEPTDSLTLIRDGDKLVVYRL-KKDANNSP 595
Query: 183 LEIVHQERSAPDFVKGSG---FKDFGAPLVTYLDDDPPSGADIELAASRLLSPLIRTCSS 239
L + ++ F+ G +K FG PLV+ L D +G+D+E +LLS
Sbjct: 596 LIVYMHQKLEEQFISGKSSPTWKAFGIPLVSRL-CDVENGSDVENLYLKLLSSFKMPTE- 653
Query: 240 NAVHCGKENGFLSESNGETSNCCNGHAELGDRSMDTMELEDTSGQELS----------FQ 289
F +E+ N A + T +EDT+ ++ +
Sbjct: 654 ----------FFTEN---LENPTEEEATDKTDTDGTTSVEDTNSTDVKETTESLPDPVLR 700
Query: 290 LFLTDDRYSSRKPIFKDSVIKTGANHIKVFLEWTENEHKLYDPSYMKDLPVVYHKTGFTA 349
L+LTDDR +S + + + V W E +YD + LP V K+G
Sbjct: 701 LYLTDDRGNSIEAEMLKEKPVNKSKRLNVLARWPVKELDVYDTCLLSSLPEV-SKSG--- 756
Query: 350 KKTRQEGVSLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRF 409
K QE VSLF CLEAFLTEEPLGPDDMWYCPGCK+HRQA KKLDLW LPEILV HLKRF
Sbjct: 757 TKRPQESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRF 816
Query: 410 SYSRYLKNKLDTFVDFPIHNLDLSKFVKRKDGK-SYVYELYAISNHYGGLGGGHYTAFAK 468
SYSR++KNKL+ +VDFP+ NLDLS ++ K+G+ +Y Y LYAISNHYG +GGGHYTA+
Sbjct: 817 SYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGGGHYTAYVH 876
Query: 469 LIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRV 504
D RWY+FDDS V +++ IKTSAAYVLFY+R+
Sbjct: 877 HGGD-RWYDFDDSHVHQISQEKIKTSAAYVLFYKRL 911
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | UBP5
(UBIQUITIN-SPECIFIC PROTEASE 5); ubiquitin-specific
protease | chr2:17076714-17082192 REVERSE
Length = 924
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/510 (49%), Positives = 335/510 (65%), Gaps = 8/510 (1%)
Query: 3 CLLLDGLHEDLNRVKQKPYIEMKDWDGRPDEEVADECWRNHKARNDSVIVDVCQGQYKST 62
LLDGLHEDLNRVK KPYI +D DGRPDEEVADE W+NH ARNDS+IVDVCQGQYKST
Sbjct: 413 AFLLDGLHEDLNRVKHKPYINSRDADGRPDEEVADEFWKNHIARNDSIIVDVCQGQYKST 472
Query: 63 LVCPVCSKISITFDPFMYLSLPLPSTVTRSMTVTVFYGDGSGLPMPYTVSVLKNGHCRDL 122
LVCP+C+K+S+TFDPFMYLSLPL TR++TVTVF D + LP TV+V K G CRDL
Sbjct: 473 LVCPICNKVSVTFDPFMYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQGRCRDL 532
Query: 123 IQALVAACCLRSDESLLLAEVYDHRIYRLFENPFESLTSIKDEEYIVAYRLSQ--KGIGK 180
IQAL AC L+ E L LAE+ ++ I+RLFE+P L+SIKD++++ AY+LS+ +
Sbjct: 533 IQALTNACSLKQSEELKLAEIRNNFIHRLFEDPLIPLSSIKDDDHLAAYKLSKSSENTTL 592
Query: 181 RKLEIVHQERSAPDFVKGSGFKDFGAPLVTYLD-DDPPSGADIELAASRLLSPLIRTCSS 239
+L + +++ A + K G PL++ D + I +LSP R S
Sbjct: 593 LRLVLRRRDQKAGERESTVQLKPCGTPLLSSASCGDALTKGKIHCLVQNMLSPFRREESV 652
Query: 240 NAVHCGKENGFLSESNGETSNCCNGHAELGD-RSMDTMELEDTSGQELSFQLFLTDDRYS 298
G + + E N ++G + D +LS QL D++
Sbjct: 653 GKK--GNSDSSIPERRSARFNNTEEEDKVGGLKKAKKSNSSDLGASKLSLQLIDEDNKTI 710
Query: 299 SRKPIFKDSVIKTGANHIKVFLEWTENEHKLYDPSYMKDLPVVYHKTGFTAKKTRQEGVS 358
+ +++ + + ++L+WT +YD + ++ LP V K G T KK R E +S
Sbjct: 711 NLPDNEAEAMKLPSSATVTIYLDWTPELSGMYDITCLESLPEVL-KYGPTTKKARSEPLS 769
Query: 359 LFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKNK 418
L++CLEAFL EEPL PD+MW+CP C + RQA+KKLDLW LPE+LV HLKRFSYSR +K+K
Sbjct: 770 LYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKHK 829
Query: 419 LDTFVDFPIHNLDLSKFVKRKD-GKSYVYELYAISNHYGGLGGGHYTAFAKLIDDKRWYN 477
L+TFV+FPIH+LDL+K+V K+ + +YELYA++NHYGG+G GHYTA KL+DD RWYN
Sbjct: 830 LETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMGSGHYTAHIKLLDDSRWYN 889
Query: 478 FDDSRVSPVNEADIKTSAAYVLFYQRVETA 507
FDDS +S +NE D+K+ AAYVLFY+R A
Sbjct: 890 FDDSHISHINEDDVKSGAAYVLFYRRKSDA 919
>AT4G31670.1 | Symbols: UBP18 | UBP18 (UBIQUITIN-SPECIFIC PROTEASE
18); cysteine-type endopeptidase/ ubiquitin
thiolesterase | chr4:15336007-15339506 REVERSE
Length = 631
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
SL CL+ F EE L D+M+ C C + +A K+L + P IL LKR+ RY
Sbjct: 329 SLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQGGRY--G 386
Query: 418 KLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYGGLGG---GHYTAFAKLIDDKR 474
KL+ + FP LDL+ ++ S VY+LYA+ H L GHY + K
Sbjct: 387 KLNKRISFP-ETLDLNPYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGN- 444
Query: 475 WYNFDDSRVSPVNEADIKTSAAYVLFYQRVET 506
WY DDS + V D+ + AY+L Y R++
Sbjct: 445 WYRIDDSEIESVELEDVLSQRAYMLLYSRIQA 476
>AT2G24640.1 | Symbols: UBP19 | UBP19 (UBIQUITIN-SPECIFIC PROTEASE
19); cysteine-type endopeptidase/ ubiquitin
thiolesterase | chr2:10475613-10479341 REVERSE
Length = 672
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 335 MKDLPVVYHKTGFTAKKTRQEGVSLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLD 394
M DL V H + VSL CL+ F +E L D+++ C C + +A K+L
Sbjct: 322 MMDLTVEIHG----------DAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLS 371
Query: 395 LWTLPEILVFHLKRFSYSRYLKNKLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNH 454
+ P IL LKRF R+ KL+ + FP DL ++ S VY+LYA+ H
Sbjct: 372 IRCAPNILTIALKRFQGGRF--GKLNKRISFP-ETFDLGPYMSGGGEGSDVYKLYAVIVH 428
Query: 455 YGGLGG---GHYTAFAKLIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRVETATKVG 511
L GHY + K WY DDS V V D+ + AY+L Y RV+
Sbjct: 429 LDMLNASFFGHYICYVKDFRGN-WYRIDDSEVEKVELEDVLSQRAYMLLYSRVQPRPSNL 487
Query: 512 LGETSQ 517
E SQ
Sbjct: 488 RSEESQ 493
>AT5G46740.1 | Symbols: UBP21 | UBP21 (UBIQUITIN-SPECIFIC PROTEASE
21); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:18965410-18968492 REVERSE
Length = 732
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
+L+ LE+F E L +D C CK+ K+L LP + FHLKRF+
Sbjct: 324 TLWKALESFTCVEKL--EDQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTME 381
Query: 418 KLDTFVDFPIHNLDLSKFVKRKDGK--SYVYELYAISNHYGGLGG-GHYTAFAKLIDDKR 474
K+ ++FP+ LDLS F+ S Y LYA H G GHY+++ + +
Sbjct: 382 KIFDHIEFPLE-LDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPET- 439
Query: 475 WYNFDDSRVSPVNEADIKTSAAYVLFYQR 503
W+NFDDS+V+ ++E + + AY+LFY R
Sbjct: 440 WHNFDDSKVTRISEERVLSRPAYILFYAR 468
>AT1G17110.1 | Symbols: UBP15 | UBP15 (UBIQUITIN-SPECIFIC PROTEASE
15); ubiquitin-specific protease | chr1:5845816-5849889
REVERSE
Length = 924
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
SL L F E L ++M+ C C + +A K+L + P IL LKRF RY
Sbjct: 599 SLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRY--G 656
Query: 418 KLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYGGLGG---GHYTAFAKLIDDKR 474
K++ + FP LD+ F+ R +Y LYA+ H L GHY ++ K +
Sbjct: 657 KINKCISFP-EMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGN- 714
Query: 475 WYNFDDSRVSPVNEADIKTSAAYVLFYQR 503
WY DDS + PV + + AY+LFY R
Sbjct: 715 WYRIDDSEIHPVPMTQVMSEGAYMLFYMR 743
>AT5G10790.1 | Symbols: UBP22 | UBP22 (UBIQUITIN-SPECIFIC PROTEASE
22); ubiquitin thiolesterase/ ubiquitin-specific
protease/ zinc ion binding | chr5:3410638-3412559
FORWARD
Length = 557
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 30/185 (16%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYS--RYL 415
+L CL+ F E LGPD C C + R+++K++ + LP +L H+KRF +S R
Sbjct: 362 TLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRKT 421
Query: 416 KNKLDTFVDFPIHNLDLSKFV------KRKDGKSYV------------------YELYAI 451
K+D+++ +P L++S ++ KR + + +E++A+
Sbjct: 422 SRKIDSYLQYPFR-LNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAV 480
Query: 452 SNHYGGLGGGHYTAFAKLIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRVETATKVG 511
H G L GHY + +L WY DD+ ++ V E ++ Y+LFY + ET +
Sbjct: 481 VTHKGMLESGHYVTYLRL--KGLWYRCDDAWINEVEEEVVRGCECYMLFYAQ-ETVIQKA 537
Query: 512 LGETS 516
E S
Sbjct: 538 HKELS 542
>AT4G24560.1 | Symbols: UBP16 | UBP16 (UBIQUITIN-SPECIFIC PROTEASE
16); ubiquitin thiolesterase/ ubiquitin-specific
protease/ zinc ion binding | chr4:12679493-12684528
REVERSE
Length = 1008
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
+L L F E L ++ + C CK + +A KKL + P +L LKRF ++
Sbjct: 703 TLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKF--G 760
Query: 418 KLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYGGLGG---GHYTAFAKLIDDKR 474
KL+ + FP LDL+ +V KS+ Y+LY + H + GHY + + + +
Sbjct: 761 KLNKLIRFP-ETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIR--NQNK 817
Query: 475 WYNFDDSRVSPVNEADIKTSAAYVLFYQR 503
WY DDS V + I T AY+LFY R
Sbjct: 818 WYKADDSTVVTSDVERILTKGAYMLFYAR 846
>AT5G57990.1 | Symbols: UBP23 | UBP23 (UBIQUITIN-SPECIFIC PROTEASE
23); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:23470218-23473997 REVERSE
Length = 859
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 377 MWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKNKLDTFVDFPIHNLDLSKFV 436
++ C CKQ +A K+L + P +L HLKRF R K+D VDF +D+ FV
Sbjct: 286 VYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHR--SEKIDRKVDF-TSAIDMKPFV 342
Query: 437 KRKDGKSYVYELYAISNHYGGLG-GGHYTAFAKLIDDKRWYNFDDSRVSPVNEADIKTSA 495
+ Y LY + HYG GHY F + WY+ DD+RV V+E +
Sbjct: 343 SGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVR-TSSGMWYSLDDNRVVQVSEKTVFNQK 401
Query: 496 AYVLFYQR 503
AY+LFY R
Sbjct: 402 AYMLFYVR 409
>AT4G17895.1 | Symbols: UBP20 | UBP20 (UBIQUITIN-SPECIFIC PROTEASE
20); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:9939914-9942698 FORWARD
Length = 695
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
+L S LE+F E L D+ C C + K+L L LP + FHLKRF +
Sbjct: 331 TLGSALESFTRVEKL--DEQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYME 388
Query: 418 KLDTFVDFPIHNLDLSKFVK--RKDGKSYVYELYAISNHYG-GLGGGHYTAFAKLIDDKR 474
K+ V P+ +DL +++ +++ S Y LYA+ H+G + GHY+++ + K
Sbjct: 389 KIYKHVKIPLE-IDLQPYMRNIQENEVSTKYHLYALVEHFGYSVAYGHYSSYVRSAP-KI 446
Query: 475 WYNFDDSRVSPVNEADIKTSAAYVLFYQR 503
W++FDDS+V+ ++E + + +Y+LFY R
Sbjct: 447 WHHFDDSKVTRIDEDMVLSQDSYILFYAR 475
>AT5G65450.1 | Symbols: UBP17 | UBP17 (UBIQUITIN-SPECIFIC PROTEASE
17); cysteine-type endopeptidase/ ubiquitin
thiolesterase/ zinc ion binding | chr5:26157863-26161096
FORWARD
Length = 731
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
SL L F E L ++ ++C CK +++A KKL + P IL LKRF +
Sbjct: 487 SLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNF--G 544
Query: 418 KLDTFVDFPIHNLDLSKFVKRKD-GKSYVYELYAISNHYGGLG---GGHYTAFAKLIDDK 473
KL + FP LD+S ++ + G VY LYA+ H + GHY + K +D
Sbjct: 545 KLSKPIHFP-ELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGD 603
Query: 474 RWYNFDDSRVSPVNEADIKTSAAYVLFYQR 503
W+ DDS V PV + AY+L Y R
Sbjct: 604 -WFKIDDSNVFPVQLETVLLEGAYMLLYAR 632
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ATUBP3 (ARABIDOPSIS THALIANA
UBIQUITIN-SPECIFIC PROTEASE 3); ubiquitin-specific
protease | chr4:18511858-18514139 REVERSE
Length = 371
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 354 QEGVSLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSR 413
++ S+ SCL+ F + E L +D ++C C ++A K++ + P ILV HLKRF Y
Sbjct: 207 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIE 266
Query: 414 YLK--NKLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYG-GLGGGHYTAFAKLI 470
L KL V FP+ L LS V + Y L+A+ H G G GHY + K
Sbjct: 267 QLGRYKKLSYRVVFPL-ELKLSNTV--EPYADVEYSLFAVVVHVGSGPNHGHYVSLVK-- 321
Query: 471 DDKRWYNFDDSRVSPVNEADIK------------TSAAYVLFYQRV 504
W FDD V + E+ ++ T Y+LFY+ +
Sbjct: 322 SHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESL 367
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ATUBP4 (ARABIDOPSIS THALIANA
UBIQUITIN-SPECIFIC PROTEASE 4); ubiquitin-specific
protease | chr2:9476733-9478825 REVERSE
Length = 365
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 354 QEGVSLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSR 413
++ S+ SCL+ F + E L +D ++C C ++A K++ + P ILV HLKRF Y
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 414 YLK--NKLDTFVDFPIHNLDLSKFVKRKDGKSYV---YELYAISNHYG-GLGGGHYTAFA 467
L KL V FP+ L LS V YV Y L+A+ H G G GHY +
Sbjct: 262 QLGRYKKLSYRVVFPL-ELKLSNTVDE-----YVDIEYSLFAVVVHVGSGPNHGHYVSLV 315
Query: 468 KLIDDKRWYNFDDSRVSPVNEADIKT 493
K W FDD V + E+ ++T
Sbjct: 316 K--SHNHWLFFDDESVEIIEESAVQT 339
>AT4G30890.2 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEASE
24); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:15036383-15038825 REVERSE
Length = 551
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 389 ATKKLDLWTLPEILVFHLKRFSYSRYLKNKLDTFVDFPIH-NLDLSKFVKRKDGKSYVYE 447
A+K + + L +I++ HL RFSY KL V FP+ NL+ S V + +S YE
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSN-ESLRYE 494
Query: 448 LYAISNHYG-GLGGGHYTAFAKLIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRV 504
L A H+G GHYT A+ + +W FDD+ V+P+ + AYVLFY++V
Sbjct: 495 LVATITHHGWDPSKGHYTTDARR-KNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT4G30890.1 | Symbols: UBP24 | UBP24 (UBIQUITIN-SPECIFIC PROTEASE
24); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:15036383-15038825 REVERSE
Length = 551
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 389 ATKKLDLWTLPEILVFHLKRFSYSRYLKNKLDTFVDFPIH-NLDLSKFVKRKDGKSYVYE 447
A+K + + L +I++ HL RFSY KL V FP+ NL+ S V + +S YE
Sbjct: 436 ASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSN-ESLRYE 494
Query: 448 LYAISNHYG-GLGGGHYTAFAKLIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRV 504
L A H+G GHYT A+ + +W FDD+ V+P+ + AYVLFY++V
Sbjct: 495 LVATITHHGWDPSKGHYTTDARR-KNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | UBP1 (UBIQUITIN-SPECIFIC
PROTEASE 1); ubiquitin thiolesterase/ ubiquitin-specific
protease/ zinc ion binding | chr2:13898431-13901870
REVERSE
Length = 1083
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 387 RQATKKLDLWTLPEILVFHLKRFSY-SRYLKNKLDTFVDFPIHNLDLSKFVKRK--DGKS 443
R A KK+ + P +L HLKRFS +R +KL VDF +DLSK++ + +
Sbjct: 952 RDARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQ-EFIDLSKYMDTRCSEEDE 1010
Query: 444 YVYELYAISNHYGGLGGGHYTAFAKLIDDKR------------WYNFDDSRVSPVNEADI 491
VY L + H G + GHY ++ + +R WY+ DS+V P + ++
Sbjct: 1011 PVYRLAGLVEHLGAMSRGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEV 1070
Query: 492 KTSAAYVLFYQRV 504
S AY+LFY+R+
Sbjct: 1071 LRSEAYILFYERI 1083
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | UBP26
(UBIQUITIN-SPECIFIC PROTEASE 26); ubiquitin
thiolesterase/ ubiquitin-specific protease |
chr3:18380942-18386662 REVERSE
Length = 1067
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKR--FSYSRYL 415
SL + L +L+ E L D+ ++C C AT+ + L TLP ++ F LKR F
Sbjct: 253 SLDASLNDYLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTA 312
Query: 416 KNKLDTFVDFPIHNLDLSKFVKRKDGKSYVYELYAISNHYG-GLGGGHYTAFAKLIDDKR 474
K K+ + FP LD+ + Y+L A+ H G + GHY A K
Sbjct: 313 KKKITSSFSFP-QVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAHIKDEKTGL 371
Query: 475 WYNFDDSRVS-----PVNEADIKT 493
W+ FDD VS P NEA T
Sbjct: 372 WWEFDDEHVSELGKRPCNEASSST 395
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | UBP2 (UBIQUITIN-SPECIFIC
PROTEASE 2); ubiquitin-specific protease |
chr1:1369306-1372290 REVERSE
Length = 961
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 387 RQATKKLDLWTLPEILVFHLKRFSYS-RYLKNKLDTFVDFPIHNLDLSKFV-KRKDGKSY 444
R ATKK+ + P +L HLKRFS R +KL+ V F +DL +++ R G+
Sbjct: 830 RDATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFK-EVIDLRQYMDSRCSGEDP 888
Query: 445 -VYELYAISNHYGGLGGGHYTAFA------KLIDDKR--WYNFDDSRVSPVNEADIKTSA 495
VY L + H G + GGHY A+ K D WYN D+ V V+ + S
Sbjct: 889 PVYRLAGLVEHSGTMRGGHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSE 948
Query: 496 AYVLFYQRV 504
AY+LFY+R+
Sbjct: 949 AYILFYERI 957
>AT3G14400.1 | Symbols: UBP25 | UBP25 (UBIQUITIN-SPECIFIC PROTEASE
25); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr3:4811953-4815210 REVERSE
Length = 661
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 358 SLFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKN 417
S+ L+ F E L ++ + C C++ A K++ + P ILV LKRF
Sbjct: 191 SVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGG--IFGG 248
Query: 418 KLDTFVDFPIHNLDLSKFVKR--KDGKSYVYELYAISNHYG-GLGGGHYTAFAKLIDDKR 474
K+D + F L LS F+ + KD + Y+L+ I H G GHY A+ K R
Sbjct: 249 KIDKAISFG-EILVLSNFMSKASKDPQPE-YKLFGIIVHSGFSPESGHYYAYVK-DSLGR 305
Query: 475 WYNFDDSRVSPVNEADIKTSAAYVLFYQR 503
WY +DS VS ++ + AY+LF+ R
Sbjct: 306 WYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
>AT5G06600.2 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); double-stranded DNA binding / ubiquitin
thiolesterase/ ubiquitin-specific protease |
chr5:2019545-2027834 REVERSE
Length = 1115
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 359 LFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYS--RYLK 416
+++ + ++ E L D+ ++ G + A K + P +L LKRF Y R
Sbjct: 345 VYASFDKYVEVERLEGDNKYHAEGHGL-QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTM 403
Query: 417 NKLDTFVDFPIHNLDLSKFVKRKDGK----------SYVYELYAISNHYGGLGGGHYTAF 466
K++ +FP+ LDL R+DGK +Y L+++ H GG+ GGHY AF
Sbjct: 404 VKINDRYEFPL-ELDLD----REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAF 458
Query: 467 AKLIDDKRWYNFDDSRVS 484
+ +WY FDD RV+
Sbjct: 459 IRPTLSDQWYKFDDERVT 476
>AT5G06600.1 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:2019545-2027834 REVERSE
Length = 1116
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 359 LFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYS--RYLK 416
+++ + ++ E L D+ ++ G + A K + P +L LKRF Y R
Sbjct: 346 VYASFDKYVEVERLEGDNKYHAEGHGL-QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTM 404
Query: 417 NKLDTFVDFPIHNLDLSKFVKRKDGK----------SYVYELYAISNHYGGLGGGHYTAF 466
K++ +FP+ LDL R+DGK +Y L+++ H GG+ GGHY AF
Sbjct: 405 VKINDRYEFPL-ELDLD----REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAF 459
Query: 467 AKLIDDKRWYNFDDSRVS 484
+ +WY FDD RV+
Sbjct: 460 IRPTLSDQWYKFDDERVT 477
>AT5G06600.3 | Symbols: UBP12 | UBP12 (UBIQUITIN-SPECIFIC PROTEASE
12); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr5:2020682-2027834 REVERSE
Length = 985
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 359 LFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYS--RYLK 416
+++ + ++ E L D+ ++ G + A K + P +L LKRF Y R
Sbjct: 346 VYASFDKYVEVERLEGDNKYHAEGHGL-QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTM 404
Query: 417 NKLDTFVDFPIHNLDLSKFVKRKDGK----------SYVYELYAISNHYGGLGGGHYTAF 466
K++ +FP+ LDL R+DGK +Y L+++ H GG+ GGHY AF
Sbjct: 405 VKINDRYEFPL-ELDLD----REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAF 459
Query: 467 AKLIDDKRWYNFDDSRVS 484
+ +WY FDD RV+
Sbjct: 460 IRPTLSDQWYKFDDERVT 477
>AT3G11910.1 | Symbols: UBP13 | UBP13 (UBIQUITIN-SPECIFIC PROTEASE
13); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr3:3761758-3770290 REVERSE
Length = 1115
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 359 LFSCLEAFLTEEPLGPDDMWYCPGCKQHRQATKKLDLWTLPEILVFHLKRFSYS--RYLK 416
+++ + ++ E L D+ ++ G + A K + P +L LKRF Y R
Sbjct: 345 VYASFDKYVEVERLEGDNKYHAEG-HDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTM 403
Query: 417 NKLDTFVDFPIHNLDLSKFVKRKDGK----------SYVYELYAISNHYGGLGGGHYTAF 466
K++ +FP+ LDL R+DG+ +Y L+++ H GG+ GGHY AF
Sbjct: 404 VKINDRYEFPLQ-LDLD----REDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAF 458
Query: 467 AKLIDDKRWYNFDDSRVS 484
+ +WY FDD RV+
Sbjct: 459 IRPTLSDQWYKFDDERVT 476
>AT4G39370.1 | Symbols: UBP27 | UBP27 (UBIQUITIN-SPECIFIC PROTEASE
27); ubiquitin thiolesterase/ ubiquitin-specific
protease | chr4:18306392-18308625 FORWARD
Length = 494
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 381 PGCKQHRQATKKLDLWTLPEILVFHLKRFSYSRYLKNKLDTFVDFP-IHNLDL------- 432
P + K+L + P++L ++R S++ + + KL + FP + NL L
Sbjct: 340 PWSNSYSHILKQLIIARFPKLLCIQVQRASFNMFEEFKLSGHIAFPLVLNLSLFTPSSIG 399
Query: 433 ----------SKFVKRKDGKSY-VYELYAISNHYGGLGGGHYTAFAKL------------ 469
S++ K + K++ +Y L + H+G G GHYT + +
Sbjct: 400 VNIEERIEMSSEYQKPEASKNHGMYRLVTVVEHFGRTGSGHYTVYRSVRVFSQEEEEEDC 459
Query: 470 IDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRV 504
+D W++ DS V V+E+D+ + A +LFY+R+
Sbjct: 460 DEDLSWFSISDSEVCRVSESDVLGAEASLLFYERL 494
>AT4G22350.1 | Symbols: | ubiquitin carboxyl-terminal hydrolase
family protein | chr4:11804073-11806939 REVERSE
Length = 510
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 399 PEILVFHLKRFSYSRYLKNKLDTFVDFPIHNLDLSKFV----KRKDGKSYVYELYAISN- 453
P L+FH+ RF + + K K T V+FP+ +++L ++ + +G++ + I+N
Sbjct: 397 PRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIANI 456
Query: 454 -HYGGLGGGHYTAFAKLIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRVE 505
H G G++ F + + WY D V+ ++ S AY+ Y++ E
Sbjct: 457 VHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQQE 509
>AT4G22285.1 | Symbols: | ubiquitin thiolesterase/ zinc ion binding
| chr4:11779063-11781898 REVERSE
Length = 541
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 399 PEILVFHLKRFSYSRYLKNKLDTFVDFPIHNLDLSKFV----KRKDGKSYVYELYAISN- 453
P L+FH+ RF + + K K T V+FP+ +++L ++ + +G++ + I+N
Sbjct: 428 PRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELRDYIPSLPRAPEGENVCSKYNLIANI 487
Query: 454 -HYGGLGGGHYTAFAKLIDDKRWYNFDDSRVSPVNEADIKTSAAYVLFYQRVE 505
H G G++ F + + WY D V+ ++ S AY+ Y++ E
Sbjct: 488 VHDGKPEDGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYEQEE 540