Jatropha Genome Database
- JcCB0068571.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0068571.10 - phase: 0
(815 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 1008 0.0
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 542 e-154
AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 540 e-153
AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 526 e-149
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 523 e-148
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 519 e-147
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 516 e-146
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 512 e-145
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 509 e-144
AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 506 e-143
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 500 e-141
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 496 e-140
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 496 e-140
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 494 e-140
AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 492 e-139
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 492 e-139
AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758)... 487 e-137
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 484 e-136
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 483 e-136
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 480 e-135
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 478 e-135
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 478 e-134
AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 475 e-134
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 469 e-132
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 465 e-131
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 464 e-131
AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 464 e-130
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 455 e-128
AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknow... 452 e-127
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 451 e-126
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 445 e-125
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 445 e-125
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 441 e-124
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 441 e-124
AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 440 e-123
AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures; EXP... 439 e-123
AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures; EXP... 439 e-123
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 436 e-122
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 436 e-122
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 435 e-122
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 432 e-121
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-121
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-121
AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 428 e-120
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 427 e-120
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 427 e-119
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 425 e-119
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 424 e-118
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 423 e-118
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 422 e-118
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 421 e-117
AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING FA... 417 e-116
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 416 e-116
AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 416 e-116
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 412 e-115
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO ... 410 e-114
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 409 e-114
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 408 e-114
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 405 e-113
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 404 e-112
AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 403 e-112
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 400 e-111
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 398 e-111
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 397 e-110
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 395 e-110
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 394 e-109
AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 391 e-109
AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 390 e-108
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 389 e-108
AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 387 e-107
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 385 e-107
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 385 e-107
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 382 e-106
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 382 e-106
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 380 e-105
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 379 e-105
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 377 e-104
AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 375 e-104
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 375 e-104
AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 370 e-102
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 369 e-102
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 367 e-101
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 366 e-101
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 363 e-100
AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 361 e-100
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 361 e-100
AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 360 2e-99
AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 359 4e-99
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 357 3e-98
AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 3e-97
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 5e-96
AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 349 5e-96
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 348 9e-96
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 2e-95
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 346 3e-95
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 341 1e-93
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 340 2e-93
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 8e-93
AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 338 1e-92
AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 337 2e-92
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 330 2e-90
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 330 2e-90
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 328 1e-89
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 1e-89
AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 2e-89
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 326 4e-89
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 325 5e-89
AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 325 7e-89
AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 325 8e-89
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 325 1e-88
AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 324 1e-88
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 2e-88
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 323 3e-88
AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 322 8e-88
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 319 4e-87
AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 8e-87
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 316 3e-86
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 3e-85
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 313 3e-85
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 309 5e-84
AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444)... 309 5e-84
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 1e-82
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 303 4e-82
AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 2e-81
AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 299 4e-81
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 299 5e-81
AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 299 5e-81
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 7e-81
AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 298 1e-80
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 297 2e-80
AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 5e-78
AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 289 6e-78
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 6e-77
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 282 6e-76
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 3e-75
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 280 3e-75
AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 5e-75
AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 3e-74
AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 2e-73
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 274 2e-73
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 3e-73
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 9e-73
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 1e-72
AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 271 1e-72
AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 4e-72
AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 3e-71
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 5e-71
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 6e-71
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 7e-71
AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 5e-70
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective... 260 2e-69
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 4e-69
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 6e-69
AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 3e-68
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 7e-68
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 6e-67
AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 252 7e-67
AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 5e-66
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 2e-65
AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 2e-65
AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 4e-65
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 4e-65
AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 2e-64
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 4e-64
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 241 1e-63
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 3e-63
AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 3e-63
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 239 4e-63
AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 5e-63
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 236 6e-62
AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 9e-62
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 1e-61
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 2e-61
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 1e-60
AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 227 2e-59
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 6e-59
AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 2e-58
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 3e-58
AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 5e-58
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 223 5e-58
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 3e-57
AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 217 3e-56
AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 216 3e-56
AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 7e-55
AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 4e-54
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 1e-53
AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 2e-53
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 4e-53
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 3e-52
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 2e-50
AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 4e-50
AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 4e-50
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 1e-49
AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 4e-47
AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknow... 186 6e-47
AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 1e-46
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 3e-36
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 3e-35
AT1G47580.1 | Symbols: | lipoyltransferase, putative | chr1:174... 135 1e-31
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 7e-31
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 131 1e-30
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 126 5e-29
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 5e-29
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 2e-28
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 4e-28
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 7e-28
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 122 7e-28
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 2e-27
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 5e-27
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 7e-27
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 2e-26
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 3e-26
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 117 3e-26
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 117 3e-26
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 1e-25
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 2e-25
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 2e-25
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 114 3e-25
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 114 4e-25
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 113 5e-25
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 6e-25
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 7e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 7e-25
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 112 9e-25
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 1e-24
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 106 5e-23
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 106 6e-23
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 7e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 105 1e-22
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 105 1e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 104 2e-22
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 3e-22
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 3e-22
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 104 3e-22
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 103 4e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT1G31790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 100 5e-21
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 5e-21
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 6e-21
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 8e-21
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 99 1e-20
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 95 2e-19
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 5e-19
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 93 7e-19
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 4e-18
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 6e-18
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 90 6e-18
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 8e-18
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 89 1e-17
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 88 2e-17
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 86 1e-16
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-16
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 82 1e-15
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 3e-14
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-14
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 6e-14
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 1e-13
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 75 1e-13
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 75 2e-13
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 7e-13
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 8e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-12
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-12
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 3e-12
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 70 5e-12
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-12
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 7e-12
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 69 1e-11
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 2e-11
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 68 2e-11
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 68 3e-11
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 7e-11
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 66 9e-11
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-10
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-10
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 1e-10
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 64 4e-10
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 64 4e-10
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 7e-10
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 62 1e-09
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-09
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 60 4e-09
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 6e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 6e-09
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 6e-09
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 7e-09
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 59 1e-08
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 59 2e-08
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 57 7e-08
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 7e-08
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT1G11900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 9e-08
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 9e-08
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 56 1e-07
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-07
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 1e-07
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 55 3e-07
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 3e-07
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-07
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-07
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 52 2e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 51 3e-06
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 6e-06
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 50 6e-06
AT5G27460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 7e-06
>AT3G02010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:337965-340442 FORWARD
Length = 825
Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/791 (59%), Positives = 615/791 (77%), Gaps = 4/791 (0%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+DARI+KTGFD T RSN+ + DL++ GQ+S AR+++D+MP++NT+S+N MISG++K G
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG--TKPDYVTFVTLL 146
+S A+++FD+M +R VT+T+L+G Y+++ F EAFKLF +MCRS T PD+VTF TLL
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSA--VIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
GCND + QVH+ VKLG D+ + + N L+ SYC++ +DLA L++E+P++D
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
SVT+N LI GY +G E+I LF++MR G + SDFTF VL A +GL D A GQQ+H
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
+V T + VGN +LDFYSKHD ++E R LF +MPELD VSYN++I++Y+ +
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
S++ FR++Q +DRRNFPFATMLS+AAN+ LQMGRQLH QA++ TADS + V N+LVD
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
MYAKC EEAE IF L R TV WTA+IS VQ G LKLF++MR N+ ADQ+T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
FA+VLKASA+ AS+ LGKQLH++IIRSG + ++++GS LVDMYAKCGS+KDA+Q+F+EMP
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 505 ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLR 564
+RN VSWNALISA+A NGDGEA + F +M+ G QPDSVS L V TACSH G VE+G
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 565 YFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
YF +M+ +Y + PK++HYA ++D+L R+G+F +AEKL+ EMPF+PDEIMWSS+LN+CRIH
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 625 KNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYS 684
KNQ LA+RAAE+LF+ME LRDAA YV+MSNI A AG+WE V VKKAMRERG+ KVPAYS
Sbjct: 635 KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Query: 685 WVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESL 744
WVE+ HK+H+F +ND+ HP EI+ KI+ L+ ++E+EGY PDTS + + DE +K+ESL
Sbjct: 695 WVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESL 754
Query: 745 KYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHF 804
KYHSERLA+AFALISTPEG PI+VMKNLRAC DCHAAIK+ISKIV REITVRD+SRFHHF
Sbjct: 755 KYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHF 814
Query: 805 KDGICSCRDYW 815
+G+CSC DYW
Sbjct: 815 SEGVCSCGDYW 825
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/659 (41%), Positives = 419/659 (63%), Gaps = 8/659 (1%)
Query: 160 QVHSHVVK---LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYA 216
Q+H+ ++ L H SA I+ I Y + + A L+K + + + ++I +
Sbjct: 26 QLHAQFIRTQSLSHTSASIV----ISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 217 NEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVF 276
++ +A+ F+EMR G F +VL + + D+ FG+ +HG+ V+ + +++
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 277 VGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK 336
GNAL++ Y+K + R++F MP D VSYN +I YA +G+ ++++ + R++ T
Sbjct: 142 TGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 201
Query: 337 YDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAE 396
+F +++L + + +D+ G+++H I DS+V + ++LVDMYAK R E++E
Sbjct: 202 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 261
Query: 397 RIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA 456
R+F +L R + W ++++ VQNG + E+L+LF +M V F+SV+ A A+LA
Sbjct: 262 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 321
Query: 457 SISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALIS 516
++ LGKQLH Y++R GF S+I+ SALVDMY+KCG++K A +IF M + VSW A+I
Sbjct: 322 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 381
Query: 517 AYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLV 576
+A +G G + LFEEM G +P+ V+F+ V TACSH GLV+E YFNSMTKVY L
Sbjct: 382 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 441
Query: 577 PKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQ 636
+ EHYA++ D+L R+GK ++A I++M +P +WS++L+SC +HKN +LA++ AE+
Sbjct: 442 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 501
Query: 637 LFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFC 696
+F ++ + YV M N+ A G+W+ + K++ MR++GL K PA SW+E+K+K H F
Sbjct: 502 IFTVDS-ENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFV 560
Query: 697 ANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFA 756
+ D++HP M +I + + EQMEKEGYV DTS LH+ DE+ K E L HSERLA+AF
Sbjct: 561 SGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFG 620
Query: 757 LISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+I+T G+ I V KN+R CTDCH AIK ISKI REI VRD+SRFHHF G CSC DYW
Sbjct: 621 IINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 679
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 256/483 (53%), Gaps = 9/483 (1%)
Query: 59 SEARELFDQMPYRNTIS---SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYS 115
S+A++L Q ++S ++++IS Y L A +F ++ + + +I ++
Sbjct: 22 SQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVI 175
F +A FV M SG PD+ F ++L C ++ VH +V+LG D +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
N+L++ Y K+ +D ++++ MP++D V+YN +IAGYA G ++A+++ EM
Sbjct: 142 TGNALMNMYAKLLGMDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 201
Query: 236 FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEAR 295
+ FT +VL D+ G++IHGY ++ + +V++G++L+D Y+K + ++
Sbjct: 202 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 261
Query: 296 KLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
++F ++ DG+S+N ++ Y G E++ LFR++ K F++++ A++
Sbjct: 262 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 321
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
L +G+QLH + S + +A+ALVDMY+KC + A +IF +++ V WTA+I
Sbjct: 322 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 381
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG-KQLHSYIIRSGFM 474
+ +GH E++ LF EM+R V +Q F +VL A +++ + +S G
Sbjct: 382 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 441
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEM---PERNVVSWNALISAYASNGDGEATLKLF 531
+ +A+ D+ + G L++A +M P +V W+ L+S+ + + + E K+
Sbjct: 442 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSV--WSTLLSSCSVHKNLELAEKVA 499
Query: 532 EEM 534
E++
Sbjct: 500 EKI 502
>AT2G27610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11783927-11786533 REVERSE
Length = 868
Score = 540 bits (1390), Expect = e-153, Method: Compositional matrix adjust.
Identities = 281/740 (37%), Positives = 446/740 (60%), Gaps = 8/740 (1%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
++ Y+K +++FD M ERN VT+T LI GY+++ E LF+RM GT+P+
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
TF L + + QVH+ VVK G D + + NSLI+ Y K V A L+
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
+ + VT+N++I+GYA G + EA+ +F MR S+ +F +V+ L ++ F
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV-SYNMMITAYA 317
+Q+H VK +++ + AL+ YSK +++A +LF ++ + V S+ MI+ +
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
+E+++LF +++ F ++ +L+ L + ++H+Q + T +
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT----ALPVISPSEVHAQVVKTNYERSST 429
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
V AL+D Y K + EEA ++F + + V W+AM++ Q G E ++K+F E+ +
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 438 VTADQATFASVLKA-SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
+ ++ TF+S+L +A AS+ GKQ H + I+S SS+ SAL+ MYAK G+++ A
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
++FK E+++VSWN++IS YA +G L +F+EM + D V+F+ VF AC+H
Sbjct: 550 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
GLVEEG +YF+ M + K+ P +EH + +VD+ R+G+ +KA K+I MP +W +
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
IL +CR+HK +L + AAE++ M+ D+A YV +SN+ AE+G W+ KV+K M ER
Sbjct: 670 ILAACRVHKKTELGRLAAEKIIAMKP-EDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728
Query: 677 LTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNED 736
+ K P YSW+E+K+K + F A D++HP +I +K++ LS +++ GY PDTS L + D
Sbjct: 729 VKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDID 788
Query: 737 EDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVR 796
++ K L HSERLAIAF LI+TP+GSP+L++KNLR C DCH IK+I+KI REI VR
Sbjct: 789 DEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVR 848
Query: 797 DSSRFHHF-KDGICSCRDYW 815
DS+RFHHF DG+CSC D+W
Sbjct: 849 DSNRFHHFSSDGVCSCGDFW 868
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 163/588 (27%), Positives = 295/588 (50%), Gaps = 22/588 (3%)
Query: 82 GYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVT 141
G + +L A +FD R+ +Y L+ G+S+ + EA +LF+ + R G + D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 142 FVTLLSGCNDPKMIKGLF--QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE 199
F ++L + LF Q+H +K G V + SL+D+Y K +++ E
Sbjct: 96 FSSVLK--VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 200 MPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA----GIGLDD 255
M +R+ VT+ LI+GYA N E + LFM M++ G + + FTF A L G+G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG--- 210
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
G Q+H VK L + V N+L++ Y K + +AR LF K V++N MI+
Sbjct: 211 -GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
YA GL E++ +F ++ FA+++ L AN+ +L+ QLH + +
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRC---TVPWTAMISANVQNGHFEESLKLFSE 432
+ AL+ Y+KC +A R+F ++ C V WTAMIS +QN EE++ LFSE
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIG--CVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
M+R V ++ T++ +L A L IS ++H+ ++++ + S G+AL+D Y K G
Sbjct: 388 MKRKGVRPNEFTYSVILTA---LPVIS-PSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
+++A ++F + ++++V+W+A+++ YA G+ EA +K+F E+ G +P+ +F +
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEI 612
C+ + F+ +L ++++ + + G + AE++ + D +
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLV 562
Query: 613 MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
W+S+++ H A +++ +V D ++ + AG
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
S+ +++ Y K+G + A+E+F E++ V++ +I GY++ Q ++A +F M +
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 136 KPDYVTFVTLLSGCNDPKMI---KGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
K D VTF+ + + C ++ + F + K+ C ++D Y + ++
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC--MVDLYSRAGQLEK 650
Query: 193 ASQLYKEMPQ 202
A ++ + MP
Sbjct: 651 AMKVIENMPN 660
>AT4G33170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15995701-15998673 REVERSE
Length = 990
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 286/843 (33%), Positives = 466/843 (55%), Gaps = 52/843 (6%)
Query: 23 PNVKTCIDARIV-----------KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR 71
P +K C+ + V K G D + + ++ G++ E + LF++MPYR
Sbjct: 150 PMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR 209
Query: 72 NTISSNVMISGYL----KEGKLSIAKEIFDSMVERNAVTYTLL--IGG------------ 113
+ + N+M+ YL KE + ++ S + N +T LL I G
Sbjct: 210 DVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFA 269
Query: 114 --------------------YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPK 153
Y S Q+ K F M S + D VTF+ +L+
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 329
Query: 154 MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIA 213
+ QVH +KLG D + + NSLI+ YCK+ A ++ M +RD +++N++IA
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIA 389
Query: 214 GYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL-DDIAFGQQIHGYAVKTTLI 272
G A G EA+ LFM++ G + +T +VL A L + ++ +Q+H +A+K +
Sbjct: 390 GIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV 449
Query: 273 WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
+ FV AL+D YS++ C+ EA LF + D V++N M+ Y + +++ LF +
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 333 QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRP 392
+F AT+ + + G+Q+H+ AI + D ++ V++ ++DMY KC
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 393 EEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKAS 452
A+ F + V WT MIS ++NG E + +FS+MR V D+ T A++ KAS
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 453 ANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWN 512
+ L ++ G+Q+H+ ++ + + G++LVDMYAKCGS+ DA +FK + N+ +WN
Sbjct: 629 SCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 513 ALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
A++ A +G+G+ TL+LF++M LG +PD V+F+ V +ACSH GLV E ++ SM
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
Y + P+ EHY+ + D L R+G +AE LI M + M+ ++L +CR+ + + KR
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 633 AAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKV 692
A +L +E L D++ YV +SN+ A A +W+ + + M+ + K P +SW+E+K+K+
Sbjct: 809 VATKLLELEPL-DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKI 867
Query: 693 HIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLA 752
HIF +D+++ Q + I K+ + +++EGYVP+T L + +E+ K +L YHSE+LA
Sbjct: 868 HIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLA 927
Query: 753 IAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCR 812
+AF L+STP +PI V+KNLR C DCH A+K I+K+ REI +RD++RFH FKDGICSC
Sbjct: 928 VAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCG 987
Query: 813 DYW 815
DYW
Sbjct: 988 DYW 990
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/611 (26%), Positives = 285/611 (46%), Gaps = 56/611 (9%)
Query: 56 GQLSEAREL-FDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGY 114
G+ + AR L F++ P R I N +IS Y K G L+ A+ +FD M +R+ V++ ++ Y
Sbjct: 58 GKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 115 SKSDQFI-----EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
++S + + +AF LF + + +T +L C + H + K+G
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
D + +L++ Y K V L++EMP RD V +N ++ Y GF +EAI L
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 230 EMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
G ++ T + L A I DD GQ VK+ F + +D
Sbjct: 236 AFHSSGLNPNEITLR--LLARISGDDSDAGQ------VKS--------------FANGND 273
Query: 290 CLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
+ +F N ++ Y +G + F + + + F ML+
Sbjct: 274 ASSVSEIIF----------RNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLA 323
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
A + L +G+Q+H A+ D + V+N+L++MY K R+ A +F +S R +
Sbjct: 324 TAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS 383
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA-SISLGKQLHSYI 468
W ++I+ QNG E++ LF ++ R + DQ T SVLKA+++L +SL KQ+H +
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATL 528
I+ +S + +AL+D Y++ +K+A +I E ++V+WNA+++ Y + DG TL
Sbjct: 444 IKINNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTL 502
Query: 529 KLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH------Y 582
KLF M G + D + VF C + +G +V+ K +
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQG-------KQVHAYAIKSGYDLDLWVS 555
Query: 583 ASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV 642
+ I+D+ + G A+ +P PD++ W+++++ C + ++ A Q+ M V
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 643 LRDAAPYVTMS 653
L D T++
Sbjct: 615 LPDEFTIATLA 625
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 151/330 (45%), Gaps = 24/330 (7%)
Query: 18 AKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQ-LSEARELFDQMPYR----N 72
A+N C+ ++++ G P Y + +++ L E L Q+ N
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPD----QYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN 447
Query: 73 TIS----SNVMISGY-----LKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEA 123
+S S +I Y +KE ++ + FD V + ++ GY++S +
Sbjct: 448 NVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHKT 501
Query: 124 FKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
KLF M + G + D T T+ C I QVH++ +K G+D + + + ++D
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
Y K + A + +P D V + +I+G G + A +F +MR +G +FT
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
+ A L + G+QIH A+K + FVG +L+D Y+K + +A LF ++
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
++ ++N M+ A G KE++ LF++++
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
DL +G+ H++ + + E + N L+ MY+KC A R+F K+ R V W ++++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 416 ANVQNG-----HFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
A Q+ + +++ LF +R+D V + T + +LK + + + H Y +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKL 530
G + ALV++Y K G +K+ +F+EMP R+VV WN ++ AY G E + L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 531 FEEMVLLGYQPDSVSF 546
G P+ ++
Sbjct: 234 SSAFHSSGLNPNEITL 249
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 523 bits (1348), Expect = e-148, Method: Compositional matrix adjust.
Identities = 272/784 (34%), Positives = 449/784 (57%), Gaps = 59/784 (7%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
++K G D N I ++TG+ +EA +F +MP +++S N MISGYL+ G+ +A
Sbjct: 56 LLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELA 114
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP 152
+++FD M ER+ V++ ++I GY ++ +A +LF M + D ++ T+LSG
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSG---- 166
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALI 212
Y + CVD A ++ MP+++ V++NAL+
Sbjct: 167 -------------------------------YAQNGCVDDARSVFDRMPEKNDVSWNALL 195
Query: 213 AGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI-HGYAVKTTL 271
+ Y +EA LF + ++ +L + I +Q V+ +
Sbjct: 196 SAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 272 IWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRK 331
WN + Y++ + EAR+LF + P D ++ M++ Y +++E+ LF K
Sbjct: 252 SWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 332 LQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRR 391
+ +R + ML+ ++M ++L V N ++ YA+C +
Sbjct: 307 MP----ERNEVSWNAMLAGYVQGERMEMAKELFD----VMPCRNVSTWNTMITGYAQCGK 358
Query: 392 PEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKA 451
EA+ +F K+ R V W AMI+ Q+GH E+L+LF +M R+ ++++F+S L
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 452 SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSW 511
A++ ++ LGKQLH +++ G+ + + G+AL+ MY KCGS+++A +FKEM +++VSW
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 512 NALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
N +I+ Y+ +G GE L+ FE M G +PD + + V +ACSH GLV++G +YF +MT+
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 572 VYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAK 631
Y ++P +HYA +VD+L R+G + A L+ MPF+PD +W ++L + R+H N +LA+
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 598
Query: 632 RAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHK 691
AA+++F ME ++ YV +SN+ A +G+W VGK++ MR++G+ KVP YSW+EI++K
Sbjct: 599 TAADKIFAMEP-ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNK 657
Query: 692 VHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERL 751
H F D+ HP+ EI ++ L +M+K GYV TS LH+ +E+ K ++YHSERL
Sbjct: 658 THTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERL 717
Query: 752 AIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSC 811
A+A+ ++ G PI V+KNLR C DCH AIK +++I GR I +RD++RFHHFKDG CSC
Sbjct: 718 AVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSC 777
Query: 812 RDYW 815
DYW
Sbjct: 778 GDYW 781
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 29/278 (10%)
Query: 351 AANMLDLQMGRQLHSQ-----AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
AAN L+ Q Q ++ DS++ N + Y + R EA R+F ++
Sbjct: 34 AANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW 93
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
+V + MIS ++NG FE + KLF EM D ++ ++K ++ ++L
Sbjct: 94 SSVSYNGMISGYLRNGEFELARKLFDEM----PERDLVSWNVMIKGYVRNRNLGKARELF 149
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
+ + + + ++ YA+ G + DA +F MPE+N VSWNAL+SAY N E
Sbjct: 150 EIMPE----RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKME 205
Query: 526 ATLKLF---EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHY 582
LF E L VS+ C+ + E ++F+SM V +V +
Sbjct: 206 EACMLFKSRENWAL-------VSWNCLLGGFVKKKKIVEARQFFDSMN-VRDVVS----W 253
Query: 583 ASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
+I+ +SGK D+A +L E P D W+++++
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTAMVSG 290
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
RR N A F S+ +A+ S K L ++ G S I + + Y + G
Sbjct: 26 RRCNNAHGAANFHSLKRATQTQIQKSQTKPL----LKCG-DSDIKEWNVAISSYMRTGRC 80
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+A+++FK MP + VS+N +IS Y NG+ E KLF+EM + D VS
Sbjct: 81 NEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVS-------- 128
Query: 554 SHWGLVEEGL---RYFNSMTKVYKLVPKRE--HYASIVDVLCRSGKFDKAEKLIAEMPFD 608
W ++ +G R ++++++P+R+ + +++ ++G D A + MP +
Sbjct: 129 --WNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP-E 185
Query: 609 PDEIMWSSILNS 620
+++ W+++L++
Sbjct: 186 KNDVSWNALLSA 197
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 519 bits (1337), Expect = e-147, Method: Compositional matrix adjust.
Identities = 273/740 (36%), Positives = 431/740 (58%), Gaps = 2/740 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +IS G + A IFD M ER+ +++ + Y+++ E+F++F M R +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+ T TLLS K +H VVK+G DS V +CN+L+ Y A+ +
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+K+MP +D +++N+L+A + N+G + +A+ L M G + TF + L A D
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G+ +HG V + L +N +GNAL+ Y K + E+R++ +MP D V++N +I Y
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL-QMGRQLHSQAIVTTADSE 375
A +++ F+ ++ ++LS DL + G+ LH+ + +S+
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
V N+L+ MYAKC ++ +F L +R + W AM++AN +GH EE LKL S+MR
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
V+ DQ +F+ L A+A LA + G+QLH ++ GF + +A DMY+KCG + +
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Query: 496 AIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
+++ R++ SWN LISA +G E F EM+ +G +P V+F+ + TACSH
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 678
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWS 615
GLV++GL Y++ + + + L P EH ++D+L RSG+ +AE I++MP P++++W
Sbjct: 679 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 738
Query: 616 SILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
S+L SC+IH N D ++AAE L +E D + YV SN+ A G+WE V V+K M +
Sbjct: 739 SLLASCKIHGNLDRGRKAAENLSKLEP-EDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 797
Query: 676 GLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNE 735
+ K A SWV++K KV F D+ HPQ EI K++ + + +++ GYV DTS AL +
Sbjct: 798 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 857
Query: 736 DEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITV 795
DE+ K +L HSERLA+A+AL+STPEGS + + KNLR C+DCH+ K +S+++GR I +
Sbjct: 858 DEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVL 917
Query: 796 RDSSRFHHFKDGICSCRDYW 815
RD RFHHF+ G+CSC+DYW
Sbjct: 918 RDQYRFHHFERGLCSCKDYW 937
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 248/482 (51%), Gaps = 2/482 (0%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y K G++ A+ +FD M RN V++ ++ G + ++E + F +MC G KP
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 143 VTLLSGCN-DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
+L++ C M + QVH V K G S V + +++ Y V + ++++EMP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
R+ V++ +L+ GY+++G +E I ++ MR G ++ + V+ + L D + G+Q
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
I G VK+ L + V N+L+ + A +F +M E D +S+N + AYA G
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
I+ES +F ++ + + +T+LS+ ++ + GR +H + DS V V N
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
L+ MYA R EA +F ++ ++ + W +++++ V +G ++L L M + +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
TF S L A G+ LH ++ SG + G+ALV MY K G + ++ ++
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 502 EMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWG-LVE 560
+MP R+VV+WNALI YA + D + L F+ M + G + ++ + V +AC G L+E
Sbjct: 422 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 561 EG 562
G
Sbjct: 482 RG 483
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 273/569 (47%), Gaps = 34/569 (5%)
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
G +S ++++F+ M +RN V++T L+ GYS + E ++ M G + + ++
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
S C K Q+ VVK G +S + + NSLI M VD A+ ++ +M +RD++
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 227
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
++N++ A YA G +E+ ++F MR E + T +L +D +G+ IHG
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
VK V V N LL Y+ VEA +F +MP D +S+N ++ ++ G +++
Sbjct: 288 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDAL 347
Query: 327 NLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
L + + F + L+ + GR LH +V+ ++ NALV MY
Sbjct: 348 GLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMY 407
Query: 387 AKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA 446
K E+ R+ +++ R V W A+I ++ +++L F MR + V+++ T
Sbjct: 408 GKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVV 467
Query: 447 SVLKASANLAS-ISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
SVL A + GK LH+YI+ +GF S + ++L+ MYAKCG L + +F +
Sbjct: 468 SVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 527
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRY 565
RN+++WNA+++A A +G GE LKL +M G D SF +A + ++EEG +
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 566 ---------------FNSMTKVY----------KLVPKREH-----YASIVDVLCRSGKF 595
FN+ +Y K++P + + ++ L R G F
Sbjct: 588 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYF 647
Query: 596 DKAEKL---IAEMPFDPDEIMWSSILNSC 621
++ + EM P + + S+L +C
Sbjct: 648 EEVCATFHEMLEMGIKPGHVTFVSLLTAC 676
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/549 (24%), Positives = 240/549 (43%), Gaps = 66/549 (12%)
Query: 3 LLHRKIPLKNL---SSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIM--------- 50
L+ +++P K+L +SL A S+ N +DA + S NY
Sbjct: 317 LVFKQMPTKDLISWNSLMA--SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 51 -DLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
D + G++ + + Y N I N ++S Y K G++S ++ + M R+ V +
Sbjct: 375 PDFFEKGRILHGLVVVSGLFY-NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 433
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP-KMIKGLFQVHSHVVKL 168
LIGGY++ + +A F M G +Y+T V++LS C P +++ +H+++V
Sbjct: 434 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 493
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQ--LYKEMPQRDSVTYNALIAGYANEGFNKEAIK 226
G +S + NSLI Y K C DL+S L+ + R+ +T+NA++A A+ G +E +K
Sbjct: 494 GFESDEHVKNSLITMYAK--CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 551
Query: 227 LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYS 286
L +MR G F+F L A L + GQQ+HG AVK + F+ NA D YS
Sbjct: 552 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYS 611
Query: 287 KHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFAT 346
K + E K+ S+N++I+A G +E F ++ + F +
Sbjct: 612 KCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVS 671
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL--VDMYAKCRRPEEAERIFVKLSS 404
+L+ ++ + G + I E + + + +D+ + R EAE K+
Sbjct: 672 LLTACSHGGLVDKGLAYYDM-IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 730
Query: 405 RCT-VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
+ + W ++++ S K+ + R KA+ NL+ +
Sbjct: 731 KPNDLVWRSLLA----------SCKIHGNLDRGR------------KAAENLSKLEPEDD 768
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV-----VSWNALISAY 518
S+Y S+ +M+A G +D + K+M +N+ SW L
Sbjct: 769 ------------SVYVLSS--NMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKV 814
Query: 519 ASNGDGEAT 527
+S G G+ T
Sbjct: 815 SSFGIGDRT 823
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 7/236 (2%)
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
MY K R + A +F + R V W M+S V+ G + E ++ F +M +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 445 FASVLKASANLASI-SLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
AS++ A S+ G Q+H ++ +SG +S +Y +A++ +Y G + + ++F+EM
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 504 PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGL 563
P+RNVVSW +L+ Y+ G+ E + +++ M G + S V ++C GL+++
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 564 RYFNSMTKVYK--LVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSI 617
+ +V K L K S++ +L G D A + +M + D I W+SI
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSI 232
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 486 MYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
MY K G +K A +F MP RN VSWN ++S G ++ F +M LG +P S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 546 FLCVFTACSHWG-LVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAE 604
+ TAC G + EG++ + K L+ +I+ + G + K+ E
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAK-SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 605 MPFDPDEIMWSSIL 618
MP D + + W+S++
Sbjct: 120 MP-DRNVVSWTSLM 132
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 516 bits (1330), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/740 (37%), Positives = 437/740 (59%), Gaps = 3/740 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N ++ Y + G L+ A+++FD M R+ V++ LI GYS + EA +++ + S
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
PD T ++L + ++K +H +K G +S V++ N L+ Y K A ++
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+ EM RDSV+YN +I GY +E++++F+E D F+ T +VL A L D+
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDL 323
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
+ + I+ Y +K + V N L+D Y+K ++ AR +F M D VS+N +I+ Y
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
+G + E++ LF+ + + + + ++S++ + DL+ G+ LHS I + ++
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
V+NAL+DMYAKC ++ +IF + + TV W +ISA V+ G F L++ ++MR+
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
V D ATF L A+LA+ LGK++H ++R G+ S + G+AL++MY+KCG L+++
Sbjct: 504 EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
++F+ M R+VV+W +I AY G+GE L+ F +M G PDSV F+ + ACSH
Sbjct: 564 SRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
GLV+EGL F M YK+ P EHYA +VD+L RS K KAE+ I MP PD +W+S
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWAS 683
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+L +CR + + A+R + ++ + D + SN A +W+ V ++K+++++
Sbjct: 684 VLRACRTSGDMETAERVSRRIIELNP-DDPGYSILASNAYAALRKWDKVSLIRKSLKDKH 742
Query: 677 LTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHN-E 735
+TK P YSW+E+ VH+F + D + PQ + I ++IL M KEGY+PD N E
Sbjct: 743 ITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLE 802
Query: 736 DEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITV 795
+E+ K + HSERLAIAF L++T G+P+ VMKNLR C DCH K+ISKIVGREI V
Sbjct: 803 EEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILV 862
Query: 796 RDSSRFHHFKDGICSCRDYW 815
RD++RFH FKDG CSC+D W
Sbjct: 863 RDANRFHLFKDGTCSCKDRW 882
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 268/497 (53%), Gaps = 8/497 (1%)
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL---YKEMPQRDSVTYNALIAG 214
L ++H+ V+ LG DS+ LID Y H + AS L + P ++ +N++I
Sbjct: 23 LRRIHALVISLGLDSSDFFSGKLIDKYS--HFREPASSLSVFRRVSPAKNVYLWNSIIRA 80
Query: 215 YANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWN 274
++ G EA++ + ++R+ +TF +V+ A GL D G ++ + +
Sbjct: 81 FSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD 140
Query: 275 VFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQF 334
+FVGNAL+D YS+ L AR++F +MP D VS+N +I+ Y+ G +E++ ++ +L+
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
+ +F +++L N+L ++ G+ LH A+ + +S V+V N LV MY K RRP +
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASAN 454
A R+F ++ R +V + MI ++ EES+++F E D D T +SVL+A +
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH 319
Query: 455 LASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNAL 514
L +SL K +++Y++++GF+ + L+D+YAKCG + A +F M ++ VSWN++
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 515 ISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYK 574
IS Y +GD +KLF+ M+++ Q D +++L + + + ++ G ++ K
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 575 LVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAA 634
+ A ++D+ + G+ + K+ + M D + W++++++C + +
Sbjct: 440 CIDLSVSNA-LIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 635 EQLFNMEVLRDAAPYVT 651
Q+ EV+ D A ++
Sbjct: 498 TQMRKSEVVPDMATFLV 514
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
SN +I Y K G++ + +IF SM + VT+ +I + F ++ +M +S
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
PD TF+ L C + ++H +++ G++S + I N+LI+ Y K C++ +S+
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+++ M +RD VT+ +I Y G ++A++ F +M G F A++YA
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 449 LKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM-PERN 507
L +S+NL + +++H+ +I G SS + L+D Y+ ++ +F+ + P +N
Sbjct: 14 LSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN 70
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFN 567
V WN++I A++ NG L+ + ++ PD +F V AC+ E G +
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 568 SMTKVYKLVPKREHYA--SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHK 625
++ + + + + ++VD+ R G +A ++ EMP D + W+S+++ H
Sbjct: 131 ---QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHG 186
Query: 626 NQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
+ A +L N ++ D+ T+S++L G
Sbjct: 187 YYEEALEIYHELKNSWIVPDS---FTVSSVLPAFGN 219
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 286/768 (37%), Positives = 435/768 (56%), Gaps = 6/768 (0%)
Query: 52 LVQTGQLSEAREL----FDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTY 107
L + L E R++ F Y+ ++S + + G + A +F+ + + V Y
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK 167
++ G++K +A + FVRM +P F LL C D ++ ++H +VK
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 168 LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKL 227
G + L + Y K V+ A +++ MP+RD V++N ++AGY+ G + A+++
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
M + + S T +VL A L I+ G++IHGYA+++ V + AL+D Y+K
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
L AR+LF M E + VS+N MI AY KE++ +F+K+ +
Sbjct: 284 CGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGA 343
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT 407
L A++ DL+ GR +H ++ D V V N+L+ MY KC+ + A +F KL SR
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
V W AMI QNG ++L FS+MR V D T+ SV+ A A L+ K +H
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEAT 527
++RS +++ +ALVDMYAKCG++ A IF M ER+V +WNA+I Y ++G G+A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 528 LKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVD 587
L+LFEEM +P+ V+FL V +ACSH GLVE GL+ F M + Y + +HY ++VD
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 588 VLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAA 647
+L R+G+ ++A I +MP P ++ ++L +C+IHKN + A++AAE+LF + D
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP-DDGG 642
Query: 648 PYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKE 707
+V ++NI A WE VG+V+ +M +GL K P S VEIK++VH F + HP K+
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 708 IILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPIL 767
I ++ L +++ GYVPDT+ L E+ D+K + L HSE+LAI+F L++T G+ I
Sbjct: 703 IYAFLEKLICHIKEAGYVPDTNLVLGVEN-DVKEQLLSTHSEKLAISFGLLNTTAGTTIH 761
Query: 768 VMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
V KNLR C DCH A K IS + GREI VRD RFHHFK+G CSC DYW
Sbjct: 762 VRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 509 bits (1312), Expect = e-144, Method: Compositional matrix adjust.
Identities = 267/745 (35%), Positives = 429/745 (57%), Gaps = 3/745 (0%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+T N ++S Y G L A+ IF +M +R+AVTY LI G S+ +A +LF RM
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 132 RSGTKPDYVTFVTLLSGCN-DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
G +PD T +L+ C+ D + +G Q+H++ KLG S I +L++ Y K +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQ-QLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG 250
+ A + E + V +N ++ Y + + ++F +M+ + +T+ ++L
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 251 IGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYN 310
I L D+ G+QIH +KT N +V + L+D Y+K L A + + D VS+
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 311 MMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVT 370
MI Y +++ FR++ +S A + L+ G+Q+H+QA V+
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLF 430
S++ NALV +Y++C + EE+ F + + + W A++S Q+G+ EE+L++F
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
M R+ + + TF S +KA++ A++ GKQ+H+ I ++G+ S +AL+ MYAKC
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
GS+ DA + F E+ +N VSWNA+I+AY+ +G G L F++M+ +P+ V+ + V
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
+ACSH GLV++G+ YF SM Y L PK EHY +VD+L R+G +A++ I EMP PD
Sbjct: 801 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKK 670
++W ++L++C +HKN ++ + AA L +E D+A YV +SN+ A + +W++ ++
Sbjct: 861 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEP-EDSATYVLLSNLYAVSKKWDARDLTRQ 919
Query: 671 AMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSC 730
M+E+G+ K P SW+E+K+ +H F D+NHP EI L+++ + GYV D
Sbjct: 920 KMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFS 979
Query: 731 ALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVG 790
L+ + K + HSE+LAI+F L+S P PI VMKNLR C DCHA IK +SK+
Sbjct: 980 LLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSN 1039
Query: 791 REITVRDSSRFHHFKDGICSCRDYW 815
REI VRD+ RFHHF+ G CSC+DYW
Sbjct: 1040 REIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/619 (26%), Positives = 308/619 (49%), Gaps = 15/619 (2%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+T+ N +I Y + G + +A+ +FD + ++ ++ +I G SK++ EA +LF M
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
G P F ++LS C + ++ Q+H V+KLG S +CN+L+ Y + +
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A ++ M QRD+VTYN LI G + G+ ++A++LF M G E T +++ A
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
+ GQQ+H Y K N + ALL+ Y+K + A F + + V +N+
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
M+ AY ++ S +FR++Q + + + ++L + DL++G Q+HSQ I T
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
V + L+DMYAK + + A I ++ + + V WT MI+ Q +++L F
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+M + +D+ + + A A L ++ G+Q+H+ SGF S + +ALV +Y++CG
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
++++ F++ + ++WNAL+S + +G+ E L++F M G ++ +F
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
A S +++G + +TK + E +++ + + G AEK E+ +E
Sbjct: 701 AASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVS-TKNE 758
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKA 671
+ W++I+N+ H A + +Q+ + V + +VT+ +L+ +G V K
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN---HVTLVGVLSACSH---IGLVDKG 812
Query: 672 M-------RERGLTKVPAY 683
+ E GL+ P +
Sbjct: 813 IAYFESMNSEYGLSPKPEH 831
Score = 248 bits (634), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 165/600 (27%), Positives = 285/600 (47%), Gaps = 13/600 (2%)
Query: 44 RSNYQIMD------LVQTGQLSEARELFDQMPY----RNTISSNVMISGYLKEGKLSIAK 93
R N+Q + L G L E R+L Q+ N S + YL +G L A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 94 EIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPK 153
++FD M ER T+ +I + + E F LFVRM P+ TF +L C
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 154 MIKGLF-QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALI 212
+ + Q+H+ ++ G + ++CN LID Y + VDLA +++ + +D ++ A+I
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 213 AGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLI 272
+G + EAI+LF +M LG + + F +VL A ++ + G+Q+HG +K
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 273 WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
+ +V NAL+ Y L+ A +F M + D V+YN +I + G ++++ LF+++
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 333 QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRP 392
+ + A+++ + L G+QLH+ S + AL+++YAKC
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 393 EEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKAS 452
E A F++ V W M+ A S ++F +M+ + + +Q T+ S+LK
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 453 ANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWN 512
L + LG+Q+HS II++ F + Y S L+DMYAK G L A I ++VVSW
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 513 ALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
+I+ Y + L F +M+ G + D V +AC+ ++EG + ++ V
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-QQIHAQACV 619
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
++V + R GK +++ L E D I W+++++ + N + A R
Sbjct: 620 SGFSSDLPFQNALVTLYSRCGKIEES-YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
>AT5G09950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3102877-3105864 REVERSE
Length = 995
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 291/749 (38%), Positives = 433/749 (57%), Gaps = 14/749 (1%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
++S + K G LS A+++F+ M RNAVT L+ G + EA KLF+ M S
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVS 307
Query: 139 YVTFVTLLSGCNDPKM-----IKGLFQVHSHVVKLGH-DSAVIICNSLIDSYCKMHCVDL 192
++V LLS + + +K +VH HV+ G D V I N L++ Y K +
Sbjct: 308 PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIAD 367
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
A +++ M +DSV++N++I G G EA++ + MR FT + L +
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
L GQQIHG ++K + NV V NAL+ Y++ L E RK+F MPE D VS+N +
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 313 ITAYAWTGL-IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
I A A + + E++ F Q F+++LS +++ ++G+Q+H A+
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC-TVPWTAMISANVQNGHFEESLKLF 430
E NAL+ Y KC + E+IF +++ R V W +MIS + N ++L L
Sbjct: 548 IADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLV 607
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
M + D +A+VL A A++A++ G ++H+ +R+ S + GSALVDMY+KC
Sbjct: 608 WFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKC 667
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ-PDSVSFLCV 549
G L A++ F MP RN SWN++IS YA +G GE LKLFE M L G PD V+F+ V
Sbjct: 668 GRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGV 727
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDP 609
+ACSH GL+EEG ++F SM+ Y L P+ EH++ + DVL R+G+ DK E I +MP P
Sbjct: 728 LSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKP 787
Query: 610 DEIMWSSILNS-CRIH-KNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGK 667
+ ++W ++L + CR + + +L K+AAE LF +E +A YV + N+ A G+WE + K
Sbjct: 788 NVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP-ENAVNYVLLGNMYAAGGRWEDLVK 846
Query: 668 VKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPD 727
+K M++ + K YSWV +K VH+F A DK+HP I K+ L+ +M GYVP
Sbjct: 847 ARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906
Query: 728 TSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGS-PILVMKNLRACTDCHAAIKVIS 786
T AL++ +++ K E L YHSE+LA+AF L + + PI +MKNLR C DCH+A K IS
Sbjct: 907 TGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYIS 966
Query: 787 KIVGREITVRDSSRFHHFKDGICSCRDYW 815
KI GR+I +RDS+RFHHF+DG CSC D+W
Sbjct: 967 KIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/588 (27%), Positives = 292/588 (49%), Gaps = 21/588 (3%)
Query: 61 ARELFDQMPYRNTISSNV-----MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYS 115
A F Y+N + +V +I+ YL+ G A+++FD M RN V++ ++ GYS
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF--QVHSHVVKLGHDSA 173
++ + EA M + G + FV++L C + + LF Q+H + KL +
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 174 VIICNSLIDSYCK-MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
++ N LI Y K + V A + ++ ++SV++N++I+ Y+ G + A ++F M+
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 233 DLGFETSDFTFQAVLYAGIGLD--DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDC 290
G +++TF +++ L D+ +QI K+ L+ ++FVG+ L+ ++K
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS- 349
L ARK+F +M + V+ N ++ +E+ LF + + D + +LS
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSS 317
Query: 350 ----LAANMLDLQMGRQLHSQAIVTT-ADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
A + L+ GR++H I T D V + N LV+MYAKC +A R+F ++
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL 464
+ +V W +MI+ QNG F E+++ + MRR ++ T S L + A+L LG+Q+
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 465 HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYA-SNGD 523
H ++ G ++ +AL+ +YA+ G L + +IF MPE + VSWN++I A A S
Sbjct: 438 HGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ F G + + ++F V +A S E G + + + + +
Sbjct: 498 LPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTEN 556
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAK 631
+++ + G+ D EK+ + M D + W+S++ S IH N+ LAK
Sbjct: 557 ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI-SGYIH-NELLAK 602
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 240/473 (50%), Gaps = 5/473 (1%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
N +++ Y K G ++ A+ +F M ++++V++ +I G ++ FIEA + + M R
Sbjct: 352 GNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
P T ++ LS C K K Q+H +KLG D V + N+L+ Y + ++ +
Sbjct: 412 LPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRK 471
Query: 196 LYKEMPQRDSVTYNALIAGYA-NEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
++ MP+ D V++N++I A +E EA+ F+ + G + + TF +VL A L
Sbjct: 472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLS 531
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE-LDGVSYNMMI 313
G+QIHG A+K + NAL+ Y K + K+F +M E D V++N MI
Sbjct: 532 FGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
+ Y L+ ++++L + T +F +AT+LS A++ L+ G ++H+ ++ +
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
S+V+V +ALVDMY+KC R + A R F + R + W +MIS ++G EE+LKLF M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 434 RRDNVT-ADQATFASVLKASANLASISLG-KQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+ D T D TF VL A ++ + G K S G I S + D+ + G
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAG 771
Query: 492 SLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDS 543
L ++MP + NV+ W ++ A +A L +L +P++
Sbjct: 772 ELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 150/326 (46%), Gaps = 19/326 (5%)
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQN 420
R HS+ D +V + N L++ Y + A ++F ++ R V W ++S +N
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISL--GKQLHSYIIRSGFMSSIY 478
G +E+L +M ++ + ++Q F SVL+A + S+ + G+Q+H + + +
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 479 AGSALVDMYAKC-GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLL 537
+ L+ MY KC GS+ A+ F ++ +N VSWN++IS Y+ GD + ++F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 538 GYQPDSVSF-LCVFTACSHWGLVEEGLRYFNS-MTKVYK--LVPKREHYASIVDVLCRSG 593
G +P +F V TACS L E +R M + K L+ + +V +SG
Sbjct: 201 GSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 594 KFDKAEKLIAEMPFDPDEIMWSSILNSCRIH-KNQDLAKRAAEQLFNMEVLRDAAP--YV 650
A K+ +M E + LN + Q + A + +M + D +P YV
Sbjct: 258 SLSYARKVFNQM-----ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 651 TMSNILAEAGQWESVGKVKKAMRERG 676
+ + E E VG +KK G
Sbjct: 313 ILLSSFPEYSLAEEVG-LKKGREVHG 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ + + ++ Y K G+L A F++M RN+ ++ +I GY++ Q EA KLF M
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 132 RSG-TKPDYVTFVTLLSGCNDPKMIKGLFQ 160
G T PD+VTFV +LS C+ +++ F+
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/778 (35%), Positives = 457/778 (58%), Gaps = 22/778 (2%)
Query: 54 QTGQLSEAREL-FDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMV---ERNAVTYTL 109
+ G+L AR + FD P +++ N +IS Y K G + A+++F++M +R+ V+++
Sbjct: 79 RLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSA 136
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVH-SHVVKL 168
++ Y + + ++A K+FV G P+ + ++ C++ + G+ +V ++K
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFV-GVGRVTLGFLMKT 195
Query: 169 GH-DSAVIICNSLIDSYCK-MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIK 226
GH +S V + SLID + K + + A +++ +M + + VT+ +I GF +EAI+
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 227 LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYS 286
F++M GFE+ FT +V A L++++ G+Q+H +A+++ L+ +V +L+D Y+
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYA 313
Query: 287 K---HDCLVEARKLFYKMPELDGVSYNMMITAYAWT-GLIKESINLFRKLQFTKYDRRN- 341
K + + RK+F +M + +S+ +IT Y L E+INLF ++ + N
Sbjct: 314 KCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNH 373
Query: 342 FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK 401
F F++ N+ D ++G+Q+ QA S VAN+++ M+ K R E+A+R F
Sbjct: 374 FTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 402 LSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
LS + V + + +N +FE++ KL SE+ + TFAS+L AN+ SI G
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASN 521
+Q+HS +++ G + +AL+ MY+KCGS+ A ++F M RNV+SW ++I+ +A +
Sbjct: 494 EQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKH 553
Query: 522 GDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH 581
G L+ F +M+ G +P+ V+++ + +ACSH GLV EG R+FNSM + +K+ PK EH
Sbjct: 554 GFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEH 613
Query: 582 YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
YA +VD+LCR+G A + I MPF D ++W + L +CR+H N +L K AA ++ ++
Sbjct: 614 YACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELD 673
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKN 701
+ A Y+ +SNI A AG+WE ++++ M+ER L K SW+E+ K+H F D
Sbjct: 674 P-NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA 732
Query: 702 HPQMKEIILKIDILSEQMEKEGYVPDTSCALHN----EDEDIKVESLKYHSERLAIAFAL 757
HP +I ++D L ++++ GYVPDT LH DE K L HSE++A+AF L
Sbjct: 733 HPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGL 792
Query: 758 ISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
IST + P+ V KNLR C DCH A+K IS + GREI +RD +RFHHFKDG CSC DYW
Sbjct: 793 ISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 208/441 (47%), Gaps = 53/441 (12%)
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIAFGQQIHGYAVKT 269
LI + N G + A+ M G D TF ++L + I D G+ +H ++
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL---DGVSYNMMITAYAWTGLIKESI 326
+ + + N+L+ YSK +A +F M D VS++ M+ Y G ++I
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 327 NLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA-DSEVLVANALVDM 385
+F + ++ + ++ +N + +GR + T +S+V V +L+DM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 386 YAKCRRP-EEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
+ K E A ++F K+S V WT MI+ +Q G E+++ F +M +D+ T
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC---GSLKDAIQIFK 501
+SV A A L ++SLGKQLHS+ IRSG + + +LVDMYAKC GS+ D ++F
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329
Query: 502 EMPERNVVSWNALISAYASNGD-GEATLKLFEEMVLLGY-QPDSVSFLCVFTACSHW--- 556
M + +V+SW ALI+ Y N + + LF EM+ G+ +P+ +F F AC +
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 557 -------------GL-------------------VEEGLRYFNSMTKVYKLVPKREHYAS 584
GL +E+ R F S+++ LV Y +
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSE-KNLVS----YNT 444
Query: 585 IVDVLCRSGKFDKAEKLIAEM 605
+D CR+ F++A KL++E+
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEI 465
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 150/298 (50%), Gaps = 14/298 (4%)
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF---V 400
F+++L D ++G+ +H++ I + + ++ N+L+ +Y+K +AE +F
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 401 KLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISL 460
+ R V W+AM++ NG +++K+F E + + + +V++A +N + +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 461 GKQLHSYIIRSG-FMSSIYAGSALVDMYAKC-GSLKDAIQIFKEMPERNVVSWNALISAY 518
G+ +++++G F S + G +L+DM+ K S ++A ++F +M E NVV+W +I+
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 519 ASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPK 578
G ++ F +MVL G++ D + VF+AC+ + G + +S LV
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG-KQLHSWAIRSGLVDD 303
Query: 579 REHYASIVDVLCR---SGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRA 633
E S+VD+ + G D K+ M D + W++++ KN +LA A
Sbjct: 304 VE--CSLVDMYAKCSADGSVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLATEA 356
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 11/262 (4%)
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTA-DQATFASVLKASANLASISLGKQLHSYIIRS 471
+I ++ G ++ M RD + D TF+S+LK+ LGK +H+ +I
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM---PERNVVSWNALISAYASNGDGEATL 528
++L+ +Y+K G A +F+ M +R+VVSW+A+++ Y +NG +
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 529 KLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDV 588
K+F E + LG P+ + V ACS+ V G + K S++D+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 589 LCRS-GKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAA 647
+ F+ A K+ +M + + + W+ ++ C + A +M + +
Sbjct: 212 FVKGENSFENAYKVFDKMS-ELNVVTWTLMITRC---MQMGFPREAIRFFLDMVLSGFES 267
Query: 648 PYVTMSNILAEAGQWE--SVGK 667
T+S++ + + E S+GK
Sbjct: 268 DKFTLSSVFSACAELENLSLGK 289
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/669 (37%), Positives = 377/669 (56%), Gaps = 32/669 (4%)
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF-MEMRDLGF 236
N+L+ +Y K + ++++P RD VT+N LI GY+ G A+K + MRD
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
+ T +L ++ G+QIHG +K + VG+ LL Y+ C+ +A+K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 297 LFYKMP------------------------------ELDGVSYNMMITAYAWTGLIKESI 326
+FY + E D VS+ MI A GL KE+I
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 327 NLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
FR+++ +PF ++L + + G+Q+H+ I T + V +AL+DMY
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 387 AKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA 446
KC+ A+ +F ++ + V WTAM+ Q G EE++K+F +M+R + D T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 447 SVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER 506
+ A AN++S+ G Q H I SG + + ++LV +Y KCG + D+ ++F EM R
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 507 NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYF 566
+ VSW A++SAYA G T++LF++MV G +PD V+ V +ACS GLVE+G RYF
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYF 495
Query: 567 NSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKN 626
MT Y +VP HY+ ++D+ RSG+ ++A + I MPF PD I W+++L++CR N
Sbjct: 496 KLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 627 QDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWV 686
++ K AAE L ++ A Y +S+I A G+W+SV ++++ MRE+ + K P SW+
Sbjct: 556 LEIGKWAAESLIELDP-HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Query: 687 EIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKY 746
+ K K+H F A+D++ P + +I K++ L+ ++ GY PDTS H+ +E +KV+ L Y
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY 674
Query: 747 HSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKD 806
HSERLAIAF LI P G PI V KNLR C DCH A K IS + GREI VRD+ RFH FKD
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734
Query: 807 GICSCRDYW 815
G CSC D+W
Sbjct: 735 GTCSCGDFW 743
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 166/598 (27%), Positives = 289/598 (48%), Gaps = 39/598 (6%)
Query: 8 IPLKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQ 67
+ +K L A+N VK I I++ P T N + + AR +FD+
Sbjct: 8 VQIKQCIGLGARNQSRYVKM-IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDR 66
Query: 68 MPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLF 127
+P N S N ++ Y K G +S + F+ + +R+ VT+ +LI GYS S A K +
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 128 VRMCRS-GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
M R VT +T+L + + Q+H V+KLG +S +++ + L+ Y
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 187 MHCVDLASQLYKEMPQRDSVTYN------------------------------ALIAGYA 216
+ C+ A +++ + R++V YN A+I G A
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246
Query: 217 NEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVF 276
G KEAI+ F EM+ G + + F +VL A GL I G+QIH ++T +++
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 277 VGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK 336
VG+AL+D Y K CL A+ +F +M + + VS+ M+ Y TG +E++ +F +Q +
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 337 YDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAE 396
D ++ +S AN+ L+ G Q H +AI + V V+N+LV +Y KC +++
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 397 RIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA 456
R+F +++ R V WTAM+SA Q G E+++LF +M + + D T V+ A +
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 457 SISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNAL 514
+ G++ + G + SI S ++D++++ G L++A++ MP + + W L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 515 ISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFL-CVFTACSHWGLVEE---GLRYFN 567
+SA + G+ E E ++ L + P + L ++ + W V + G+R N
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKN 604
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 256/558 (45%), Gaps = 61/558 (10%)
Query: 7 KIPLKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFD 66
++ L + L++ N + ++ I +++K GF+ + + G +S+A+++F
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 67 QMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKL 126
+ RNT+ N ++ G L G + A ++F M E+++V++ +I G +++ EA +
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 127 FVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
F M G K D F ++L C I Q+H+ +++ + + ++LID YCK
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 187 MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
C+ A ++ M Q++ V++ A++ GY G +EA+K+F++M+ G + +T
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
+ A + + G Q HG A+ + LI V V N+L+ Y K + ++ +LF +M D
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
VS+ M++AYA G E+I LF K+ +Q G L
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKM------------------------VQHG--LKPD 471
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR-CTVP----WTAMISANVQNG 421
+ T LV E+ +R F ++S VP ++ MI ++G
Sbjct: 472 GVTLTGVISACSRAGLV---------EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Query: 422 HFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR------SGF-- 473
EE+++ + M D + ++L A N ++ +GK +I +G+
Sbjct: 523 RLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTL 579
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATL----- 528
+SSIYA D A+ + KE P ++ + W + +++++ + L
Sbjct: 580 LSSIYASKGKWDSVAQLRRGMREKNVKKE-PGQSWIKWKGKLHSFSADDESSPYLDQIYA 638
Query: 529 ---KLFEEMVLLGYQPDS 543
+L +++ GY+PD+
Sbjct: 639 KLEELNNKIIDNGYKPDT 656
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 262/745 (35%), Positives = 437/745 (58%), Gaps = 12/745 (1%)
Query: 75 SSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG 134
++N++++ Y+K G A +FD M ERN V++ L GY+ D L+ R+ R G
Sbjct: 86 ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREG 141
Query: 135 TKPD---YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
+ + + +F+ L + ++ L HS +VKLG+DS + +LI++Y VD
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWL---HSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A +++ + +D V + +++ Y G+ ++++KL MR GF +++TF L A I
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
GL F + +HG +KT + + VG LL Y++ + +A K+F +MP+ D V ++
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF 318
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
MI + G E+++LF +++ F +++L+ A +G QLH +
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
D ++ V+NAL+D+YAKC + + A ++F +LSS+ V W +I G ++ +F
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
E R+ V+ + TF+S L A A+LAS+ LG Q+H I++ + ++L+DMYAKCG
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
+K A +F EM +V SWNALIS Y+++G G L++ + M +P+ ++FL V +
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
CS+ GL+++G F SM + + + P EHY +V +L RSG+ DKA KLI +P++P
Sbjct: 559 GCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSV 618
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKA 671
++W ++L++ N++ A+R+AE++ + +D A YV +SN+ A A QW +V ++K+
Sbjct: 619 MIWRAMLSASMNQNNEEFARRSAEEILKINP-KDEATYVLVSNMYAGAKQWANVASIRKS 677
Query: 672 MRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCA 731
M+E G+ K P SW+E + VH F +HP MK I ++ L+ + + GYVPD +
Sbjct: 678 MKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAV 737
Query: 732 LHNEDEDIKVESLKYHSERLAIAFALISTPEG-SPILVMKNLRACTDCHAAIKVISKIVG 790
L + D++ K + L HSERLA+A+ L+ P + IL+MKNLR C+DCH+A+KVIS IV
Sbjct: 738 LLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQ 797
Query: 791 REITVRDSSRFHHFKDGICSCRDYW 815
R++ +RD +RFHHF G+CSC D+W
Sbjct: 798 RDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 229/499 (45%), Gaps = 13/499 (2%)
Query: 150 NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYN 209
NDP K +H ++K G + N L+++Y K A L+ EMP+R++V++
Sbjct: 63 NDPISAKA---IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFV 119
Query: 210 ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT 269
L GYA + + I L+ + G E + F + L + LD +H VK
Sbjct: 120 TLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKL 175
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLF 329
N FVG AL++ YS + AR +F + D V + +++ Y G ++S+ L
Sbjct: 176 GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLL 235
Query: 330 RKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKC 389
++ + N+ F T L + + + +H Q + T + V L+ +Y +
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL 295
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
+A ++F ++ VPW+ MI+ QNG E++ LF MR V ++ T +S+L
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV 509
A LG+QLH +++ GF IY +AL+D+YAKC + A+++F E+ +N V
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV 415
Query: 510 SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
SWN +I Y + G+G +F E + V+F AC+ ++ G++
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
K K S++D+ + G A+ + EM D W+++++ H
Sbjct: 476 IKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHG---- 529
Query: 630 AKRAAEQLFNMEVLRDAAP 648
R A ++ ++ RD P
Sbjct: 530 LGRQALRILDIMKDRDCKP 548
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 189/408 (46%), Gaps = 21/408 (5%)
Query: 219 GFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
GF+ + L +E D D + A+L I +D + IH +K ++F
Sbjct: 27 GFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFA 86
Query: 278 GNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKY 337
N LL+ Y K +A LF +MPE + VS+ + YA ++ I L+ +L +
Sbjct: 87 TNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGH 142
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
+ F + L L ++ ++ LHS + DS V AL++ Y+ C + A
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSART 202
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
+F + + V W ++S V+NG+FE+SLKL S MR + TF + LKAS L +
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 458 ISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISA 517
K +H I+++ ++ G L+ +Y + G + DA ++F EMP+ +VV W+ +I+
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFL-----CVFTACSHWGLVEEGLRYFNSMTKV 572
+ NG + LF M P+ + C CS G GL V
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL--------V 374
Query: 573 YKLVPKREHYAS--IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
K+ + Y S ++DV + K D A KL AE+ +E+ W++++
Sbjct: 375 VKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVI 421
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
+VK GFD SN I + ++ A +LF ++ +N +S N +I GY G+
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE---- 429
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP 152
GG +AF +F R+ VTF + L C
Sbjct: 430 -------------------GG--------KAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALI 212
+ QVH +K + V + NSLID Y K + A ++ EM D ++NALI
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALI 522
Query: 213 AGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
+GY+ G ++A+++ M+D + + TF VL
Sbjct: 523 SGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVL 557
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/835 (34%), Positives = 443/835 (53%), Gaps = 42/835 (5%)
Query: 19 KNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELF------------- 65
+ S V C+D+ T FD S + +N Q+ ++G L A +L
Sbjct: 41 RASLRTVSDCVDS---ITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTL 97
Query: 66 --------------DQMPYRNTISSNVMISG----------YLKEGKLSIAKEIFDSMVE 101
D N I N + Y G L A +FD +
Sbjct: 98 CSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI 157
Query: 102 RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQV 161
A+ + +L+ +KS F + LF +M SG + D TF + + + + G Q+
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFN 221
H ++K G + NSL+ Y K VD A +++ EM +RD +++N++I GY + G
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNAL 281
++ + +F++M G E T +V I+ G+ +H VK N L
Sbjct: 278 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 337
Query: 282 LDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN 341
LD YSK L A+ +F +M + VSY MI YA GL E++ LF +++
Sbjct: 338 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 397
Query: 342 FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK 401
+ +L+ A L G+++H ++ V+NAL+DMYAKC +EAE +F +
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 457
Query: 402 LSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN-VTADQATFASVLKASANLASISL 460
+ + + W +I +N + E+L LF+ + + + D+ T A VL A A+L++
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 461 GKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYAS 520
G+++H YI+R+G+ S + ++LVDMYAKCG+L A +F ++ +++VSW +I+ Y
Sbjct: 518 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 577
Query: 521 NGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
+G G+ + LF +M G + D +SF+ + ACSH GLV+EG R+FN M K+ P E
Sbjct: 578 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 637
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
HYA IVD+L R+G KA + I MP PD +W ++L CRIH + LA++ AE++F +
Sbjct: 638 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFEL 697
Query: 641 EVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDK 700
E + YV M+NI AEA +WE V +++K + +RGL K P SW+EIK +V+IF A D
Sbjct: 698 EP-ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756
Query: 701 NHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALIST 760
++P+ + I + + +M +EGY P T AL + +E K E+L HSE+LA+A +IS+
Sbjct: 757 SNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816
Query: 761 PEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
G I V KNLR C DCH K +SK+ REI +RDS+RFH FKDG CSCR +W
Sbjct: 817 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
>AT3G61170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22638691-22641237 REVERSE
Length = 783
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 269/749 (35%), Positives = 423/749 (56%), Gaps = 38/749 (5%)
Query: 39 DPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDS 98
D + SN + DL ++G++ EAR++FD+MP R+ + N MI Y +LS A+++F S
Sbjct: 25 DRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 99 MVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGL 158
+N +++ LI GY KS +EAF LF M G KP+ T ++L C ++
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 159 FQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP-QRDSVTYNALIAGYAN 217
Q+H H +K G D V + N L+ Y + + A L++ M ++++VT+ +++ GY+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
GF +AI+ F ++R G +++ +TF +VL A + G Q+H VK+ N++V
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 278 GNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKY 337
+AL+D Y+K + AR L M D VS+N MI GLI E++++F ++
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 338 DRRNFPFATMLS-LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAE 396
+F ++L+ A + ++++ H + T + LV NALVDMYAK + A
Sbjct: 325 KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 397 RIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA 456
++F + + + WTA+++ N NG ++E+LKLF MR +T D+ ASVL ASA L
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELT 444
Query: 457 SISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALIS 516
+ G+Q+H I+SGF SS+ ++LV MY KCGSL+DA IF M R++++W LI
Sbjct: 445 LLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIV 504
Query: 517 AYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLV 576
YA NG L+E+ RYF+SM VY +
Sbjct: 505 GYAKNG-----------------------------------LLEDAQRYFDSMRTVYGIT 529
Query: 577 PKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQ 636
P EHYA ++D+ RSG F K E+L+ +M +PD +W +IL + R H N + +RAA+
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKT 589
Query: 637 LFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFC 696
L +E +A PYV +SN+ + AG+ + V++ M+ R ++K P SWVE K KVH F
Sbjct: 590 LMELEP-NNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFM 648
Query: 697 ANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFA 756
+ D+ HP+M EI K+D + +++ GY D S ALH+ D++ K L YHSE+LA+AF
Sbjct: 649 SEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFG 708
Query: 757 LISTPEGSPILVMKNLRACTDCHAAIKVI 785
L+ P G+PI ++KNLR C DCH+A+K++
Sbjct: 709 LLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 197/405 (48%), Gaps = 62/405 (15%)
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY- 316
FG IH YA +T L N+ +G+ SK + EAR++F KMPE D ++N MI AY
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 317 ---------------------AWTGLIK---------ESINLFRKLQFTKYDRRNFPFAT 346
+W LI E+ NLF ++Q + +
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKL-SSR 405
+L + +++ L G Q+H I T D +V V N L+ MYA+C+R EAE +F + +
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
V WT+M++ QNG ++++ F ++RR+ ++Q TF SVL A A++++ +G Q+H
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
I++SGF ++IY SAL+DMYAKC ++ A + + M +VVSWN++I G
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFT------------ACSHWGLVEEGLRYFNSMTKVY 573
L +F M + D + + + +H +V+ G Y
Sbjct: 311 EALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGY-------ATY 363
Query: 574 KLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
KLV ++VD+ + G D A K+ M + D I W++++
Sbjct: 364 KLVNN-----ALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 223/511 (43%), Gaps = 69/511 (13%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I +KTGFD + N + Q ++SEA LF+ M EG
Sbjct: 147 IHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM-----------------EG- 188
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
E+N VT+T ++ GYS++ +A + F + R G + + TF ++L+
Sbjct: 189 ------------EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTA 236
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C + QVH +VK G + + + ++LID Y K ++ A L + M D V++
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA-GIGLDDIAFGQQIHGYAV 267
N++I G +G EA+ +F M + + DFT ++L + ++ H V
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV 356
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
KT V NAL+D Y+K + A K+F M E D +S+ ++T G E++
Sbjct: 357 KTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALK 416
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
LF ++ A++LS +A + L+ G+Q+H I + S + V N+LV MY
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYT 476
Query: 388 KCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFAS 447
KC E+A IF + R + WT +I +NG E++ + F MR
Sbjct: 477 KCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMR------------- 523
Query: 448 VLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ER 506
+ I+ G + + + ++D++ + G Q+ +M E
Sbjct: 524 ------TVYGITPGPEHY---------------ACMIDLFGRSGDFVKVEQLLHQMEVEP 562
Query: 507 NVVSWNALISAYASNG---DGEATLKLFEEM 534
+ W A+++A +G +GE K E+
Sbjct: 563 DATVWKAILAASRKHGNIENGERAAKTLMEL 593
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/706 (37%), Positives = 409/706 (57%), Gaps = 71/706 (10%)
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
N+++ +Y K +D + + ++PQRDSV++ +I GY N G +AI++ +M G E
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK---------- 287
+ FT VL + + G+++H + VK L NV V N+LL+ Y+K
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 288 HDCLVE---------------------ARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
D +V A F +M E D V++N MI+ + G ++
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 327 NLFRKL---QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
++F K+ DR F A++LS AN+ L +G+Q+HS + T D +V NAL+
Sbjct: 264 DIFSKMLRDSLLSPDR--FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 384 DMYAKCRRPEEAER---------------------------------IFVKLSSRCTVPW 410
MY++C E A R IFV L R V W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
TAMI Q+G + E++ LF M + T A++L +++LAS+S GKQ+H ++
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLK 529
SG + S+ +AL+ MYAK G++ A + F + ER+ VSW ++I A A +G E L+
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVL 589
LFE M++ G +PD ++++ VF+AC+H GLV +G +YF+ M V K++P HYA +VD+
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 590 CRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPY 649
R+G +A++ I +MP +PD + W S+L++CR+HKN DL K AAE+L +E ++ Y
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEP-ENSGAY 620
Query: 650 VTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEII 709
++N+ + G+WE K++K+M++ + K +SW+E+KHKVH+F D HP+ EI
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Query: 710 LKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVM 769
+ + + ++++K GYVPDT+ LH+ +E++K + L++HSE+LAIAF LISTP+ + + +M
Sbjct: 681 MTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIM 740
Query: 770 KNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
KNLR C DCH AIK ISK+VGREI VRD++RFHHFKDG CSCRDYW
Sbjct: 741 KNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/613 (28%), Positives = 293/613 (47%), Gaps = 77/613 (12%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ R++K+G S N + +TG AR+LFD+MP R S N ++S Y K G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+ E FD + +R++V++T +I GY Q+ +A ++ M + G +P T +L+
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK---------------------- 186
+ ++ +VHS +VKLG V + NSL++ Y K
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 187 -----MHC----VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGF 236
+H +DLA +++M +RD VT+N++I+G+ G++ A+ +F +M RD
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
FT +VL A L+ + G+QIH + V T + V NAL+ YS+ + AR+
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 297 L---------------------------------FYKMPELDGVSYNMMITAYAWTGLIK 323
L F + + D V++ MI Y G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 324 ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
E+INLFR + ++ A MLS+A+++ L G+Q+H A+ + V V+NAL+
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 384 DMYAKCRRPEEAERIFVKLS-SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
MYAK A R F + R TV WT+MI A Q+GH EE+L+LF M + + D
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 443 ATFASVLKASANLASISLGKQLHSYIIR-SGFMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
T+ V A + ++ G+Q + + ++ + +VD++ + G L++A + +
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 502 EMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDS----VSFLCVFTACSHW 556
+MP E +VV+W +L+SA + + + E ++LL +P++ + +++AC W
Sbjct: 576 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLL--EPENSGAYSALANLYSACGKW 633
Query: 557 GLVEEGLRYFNSM 569
EE + SM
Sbjct: 634 ---EEAAKIRKSM 643
>AT4G33990.1 | Symbols: EMB2758 | EMB2758 (embryo defective 2758) |
chr4:16290141-16292612 REVERSE
Length = 823
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/750 (35%), Positives = 422/750 (56%), Gaps = 15/750 (2%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSK---SDQFIEAFKLF 127
+N S +++ Y G +++A+ FD + R+ + L+I GY + S + I F LF
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
M SG PDY TF ++L C +I G ++H +K G V + SLI Y +
Sbjct: 144 --MLSSGLTPDYRTFPSVLKACR--TVIDG-NKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 188 HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
V A L+ EMP RD ++NA+I+GY G KEA+ L +R + T ++L
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLL 254
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV 307
A D G IH Y++K L +FV N L+D Y++ L + +K+F +M D +
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI 314
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
S+N +I AY +I+LF++++ ++ ++ S+ + + D++ R +
Sbjct: 315 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 374
Query: 368 IVTTADSE-VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEES 426
+ E + + NA+V MYAK + A +F L + + W +IS QNG E+
Sbjct: 375 LRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEA 434
Query: 427 LKLFSEMRRDN-VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVD 485
+++++ M + + A+Q T+ SVL A + ++ G +LH ++++G ++ ++L D
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLAD 494
Query: 486 MYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
MY KCG L+DA+ +F ++P N V WN LI+ + +G GE + LF+EM+ G +PD ++
Sbjct: 495 MYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 554
Query: 546 FLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
F+ + +ACSH GLV+EG F M Y + P +HY +VD+ R+G+ + A K I M
Sbjct: 555 FVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Query: 606 PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV 665
PD +W ++L++CR+H N DL K A+E LF +E +V +SN+ A AG+WE V
Sbjct: 615 SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP-EHVGYHVLLSNMYASAGKWEGV 673
Query: 666 GKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYV 725
+++ +GL K P +S +E+ +KV +F ++ HP +E+ ++ L +++ GYV
Sbjct: 674 DEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYV 733
Query: 726 PDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVI 785
PD L + ++D K L HSERLAIAFALI+TP + I + KNLR C DCH+ K I
Sbjct: 734 PDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFI 793
Query: 786 SKIVGREITVRDSSRFHHFKDGICSCRDYW 815
SKI REI VRDS+RFHHFK+G+CSC DYW
Sbjct: 794 SKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 253/527 (48%), Gaps = 20/527 (3%)
Query: 144 TLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
TL C + + K L H+ +V V I L++ YC + V LA + + R
Sbjct: 59 TLFRYCTNLQSAKCL---HARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 204 DSVTYNALIAGYANEGFNKEAIKLF-MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
D +N +I+GY G + E I+ F + M G TF +VL A + D G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
H A+K +W+V+V +L+ YS++ + AR LF +MP D S+N MI+ Y +G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
KE++ L L+ + ++LS D G +HS +I +SE+ V+N L
Sbjct: 233 KEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
+D+YA+ R + +++F ++ R + W ++I A N ++ LF EMR + D
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSG-FMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
T S+ + L I + + + +R G F+ I G+A+V MYAK G + A +F
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 502 EMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLVE 560
+P +V+SWN +IS YA NG ++++ M G + +++ V ACS G +
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 561 EGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
+G++ + K L S+ D+ + G+ + A L ++P + + W++++
Sbjct: 469 QGMKLHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIAC 526
Query: 621 CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNI-----LAEAGQW 662
H + + A +++ + V D +VT+ + L + GQW
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 484 bits (1245), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/740 (36%), Positives = 413/740 (55%), Gaps = 7/740 (0%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR-SG 134
N ++ +++ G L A +F M ERN ++ +L+GGY+K F EA L+ RM G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 135 TKPDYVTFVTLLSGCND-PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLA 193
KPD TF +L C P + +G +VH HVV+ G++ + + N+LI Y K V A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGK-EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
L+ MP+RD +++NA+I+GY G E ++LF MR L + T +V+ A L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 254 DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMI 313
D G+ IH Y + T ++ V N+L Y EA KLF +M D VS+ MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
+ Y + L ++I+ +R + A +LS A + DL G +LH AI
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
S V+VAN L++MY+KC+ ++A IF + + + WT++I+ N E+L +M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
+ + + T + L A A + ++ GK++H++++R+G + +AL+DMY +CG +
Sbjct: 491 KM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
A F +++V SWN L++ Y+ G G ++LF+ MV +PD ++F+ + C
Sbjct: 550 NTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIM 613
S +V +GL YF+ M Y + P +HYA +VD+L R+G+ +A K I +MP PD +
Sbjct: 609 SKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 614 WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
W ++LN+CRIH DL + +A+ +F ++ + Y+ + N+ A+ G+W V KV++ M+
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDK-KSVGYYILLCNLYADCGKWREVAKVRRMMK 726
Query: 674 ERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALH 733
E GLT SWVE+K KVH F ++DK HPQ KEI ++ E+M + G + +
Sbjct: 727 ENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSM 786
Query: 734 NEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREI 793
+E E + E HSER AIAF LI+T G PI V KNL C +CH +K ISK V REI
Sbjct: 787 DETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREI 846
Query: 794 TVRDSSRFHHFKDGICSCRD 813
+VRD+ FHHFKDG CSC D
Sbjct: 847 SVRDAEHFHHFKDGECSCGD 866
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 213/426 (50%), Gaps = 7/426 (1%)
Query: 113 GYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDS 172
G + + EA KL M D FV L+ C + + +V+S +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 173 AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
V + N+ + + + + A ++ +M +R+ ++N L+ GYA +G+ EA+ L+ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 233 DLGFETSD-FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL 291
+G D +TF VL G+ D+A G+++H + V+ ++ V NAL+ Y K +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
AR LF +MP D +S+N MI+ Y G+ E + LF ++ D +++S
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWT 411
+ D ++GR +H+ I T ++ V N+L MY EAE++F ++ + V WT
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
MIS N ++++ + M +D+V D+ T A+VL A A L + G +LH I++
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
+S + + L++MY+KC + A+ IF +P +NV+SW ++I+ N + F
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNN------RCF 481
Query: 532 EEMVLL 537
E ++ L
Sbjct: 482 EALIFL 487
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 3/303 (0%)
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
G ++E++ L +Q + F ++ L + G +++S A+ + + V +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR-DN 437
NA + M+ + +A +F K+S R W ++ + G+F+E++ L+ M
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
V D TF VL+ + ++ GK++H +++R G+ I +AL+ MY KCG +K A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 498 QIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWG 557
+F MP R+++SWNA+IS Y NG L+LF M L PD ++ V +AC G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 558 LVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSI 617
G R ++ S+ + +G + +AEKL + M D + W+++
Sbjct: 312 DRRLG-RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTM 369
Query: 618 LNS 620
++
Sbjct: 370 ISG 372
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 197/480 (41%), Gaps = 68/480 (14%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I A ++ TGF S N + G EA +LF +M ++ +S MISGY
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY----- 373
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
Y L D+ I+ +++ M + KPD +T +LS
Sbjct: 374 -----------------EYNFL------PDKAIDTYRM---MDQDSVKPDEITVAAVLSA 407
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C + ++H +K S VI+ N+LI+ Y K C+D A ++ +P+++ +++
Sbjct: 408 CATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
++IAG EA+ +F+ + + + T A L A + + G++IH + ++
Sbjct: 468 TSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLR 526
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
T + + F+ NALLD Y + + A F + D S+N+++T Y+ G + L
Sbjct: 527 TGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVEL 585
Query: 329 FRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK 388
F ++ ++ F ++L + Q+ Q ++ + E + YA
Sbjct: 586 FDRMVKSRVRPDEITFISLLCGCSK-------SQMVRQGLMYFSKMEDYGVTPNLKHYA- 637
Query: 389 CRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASV 448
C V + G +E+ K +M VT D A + ++
Sbjct: 638 -----------------CVVDLLG------RAGELQEAHKFIQKM---PVTPDPAVWGAL 671
Query: 449 LKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV 508
L A I LG+ +I S Y L ++YA CG ++ ++ + M E +
Sbjct: 672 LNACRIHHKIDLGELSAQHIFELDKKSVGYY-ILLCNLYADCGKWREVAKVRRMMKENGL 730
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 271/757 (35%), Positives = 435/757 (57%), Gaps = 19/757 (2%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
+N +++ Y K G ++FD + ERN V++ LI +++ A + F M
Sbjct: 136 ANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV 195
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLF---QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
+P T V++++ C++ M +GL QVH++ ++ G ++ II N+L+ Y K+ +
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLAS 254
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
+ L RD VT+N +++ EA++ EM G E +FT +VL A
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 253 LDDIAFGQQIHGYAVKT-TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
L+ + G+++H YA+K +L N FVG+AL+D Y ++ R++F M + +N
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNA 374
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVT 370
MI Y+ KE++ LF ++ + N A ++ +H +
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 434
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLF 430
D + V N L+DMY++ + + A RIF K+ R V W MI+ V + H E++L L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 431 SEMR-----------RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
+M+ R ++ + T ++L + A L++++ GK++H+Y I++ + +
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
GSALVDMYAKCG L+ + ++F ++P++NV++WN +I AY +G+G+ + L M++ G
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
+P+ V+F+ VF ACSH G+V+EGLR F M Y + P +HYA +VD+L R+G+ +A
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 600 KLIAEMPFDPDEI-MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
+L+ MP D ++ WSS+L + RIH N ++ + AA+ L +E A+ YV ++NI +
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP-NVASHYVLLANIYSS 733
Query: 659 AGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQ 718
AG W+ +V++ M+E+G+ K P SW+E +VH F A D +HPQ +++ ++ L E+
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 719 MEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDC 778
M KEGYVPDTSC LHN +ED K L HSE+LAIAF +++T G+ I V KNLR C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853
Query: 779 HAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
H A K ISKIV REI +RD RFH FK+G CSC DYW
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 280/579 (48%), Gaps = 29/579 (5%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+S A IF S R+ + L+ +S+ EA +V M G KPD F LL
Sbjct: 48 VSGAPSIFISQ-SRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKA 106
Query: 149 CNDPKMIKGLFQVHSHVVKLGHD-SAVIICNSLIDSYCKMHCVDLAS--QLYKEMPQRDS 205
D + ++ Q+H+HV K G+ +V + N+L++ Y K C D + +++ + +R+
Sbjct: 107 VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRK--CGDFGAVYKVFDRISERNQ 164
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL---DDIAFGQQI 262
V++N+LI+ + + A++ F M D E S FT +V+ A L + + G+Q+
Sbjct: 165 VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQV 224
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
H Y ++ + N F+ N L+ Y K L ++ L D V++N ++++ +
Sbjct: 225 HAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL 283
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA-DSEVLVANA 381
E++ R++ + F +++L +++ L+ G++LH+ A+ + D V +A
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD-NVTA 440
LVDMY C++ R+F + R W AMI+ QN H +E+L LF M + A
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA 403
Query: 441 DQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
+ T A V+ A + S + +H ++++ G + + L+DMY++ G + A++IF
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 501 KEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLL-----------GYQPDSVSFLCV 549
+M +R++V+WN +I+ Y + E L L +M L +P+S++ + +
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTI 523
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDP 609
+C+ + +G + ++ L +++VD+ + G + K+ ++P
Sbjct: 524 LPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QK 581
Query: 610 DEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAP 648
+ I W+ I+ + +H N + A L M +++ P
Sbjct: 582 NVITWNVIIMAYGMHGN----GQEAIDLLRMMMVQGVKP 616
Score = 189 bits (479), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 238/465 (51%), Gaps = 22/465 (4%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N+ N +++ Y K GKL+ +K + S R+ VT+ ++ +++Q +EA + M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGH-DSAVIICNSLIDSYCKMHCV 190
G +PD T ++L C+ +M++ ++H++ +K G D + ++L+D YC V
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD-LGFETSDFTFQAVLYA 249
+++ M R +NA+IAGY+ +KEA+ LF+ M + G + T V+ A
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 250 GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSY 309
+ + + IHG+ VK L + FV N L+D YS+ + A ++F KM + D V++
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 310 NMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM---------- 359
N MIT Y ++ ++++ L K+Q +R+ A+ +SL N + L
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQ--NLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 360 ---GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA 416
G+++H+ AI ++V V +ALVDMYAKC + + ++F ++ + + W +I A
Sbjct: 533 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMA 592
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS--GFM 474
+G+ +E++ L M V ++ TF SV A ++ + G ++ Y+++ G
Sbjct: 593 YGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVE 651
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPE--RNVVSWNALISA 517
S + +VD+ + G +K+A Q+ MP +W++L+ A
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 228/472 (48%), Gaps = 35/472 (7%)
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGNA 280
+EA+ +++M LG + ++ F A+L A L D+ G+QIH + K + +V V N
Sbjct: 79 REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT 138
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
L++ Y K K+F ++ E + VS+N +I++ + ++ FR + +
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 341 NFPFATMLSLAANML---DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
+F ++++ +N+ L MG+Q+H+ + + + N LV MY K + ++
Sbjct: 199 SFTLVSVVTACSNLPMPEGLMMGKQVHAYGL-RKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
+ R V W ++S+ QN E+L+ EM + V D+ T +SVL A ++L
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 458 ISLGKQLHSYIIRSGFM-SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALIS 516
+ GK+LH+Y +++G + + + GSALVDMY C + ++F M +R + WNA+I+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 517 AYASNGDGEATLKLF---EEMVLLGYQPDSVSFLCVFTACSHWGLV--EEGLRYFNSMTK 571
Y+ N + L LF EE G +S + V AC G +E + F
Sbjct: 378 GYSQNEHDKEALLLFIGMEESA--GLLANSTTMAGVVPACVRSGAFSRKEAIHGF----- 430
Query: 572 VYKLVPKREHYA--SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS--------- 620
V K R+ + +++D+ R GK D A ++ +M D D + W++++
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHED 489
Query: 621 --CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKK 670
+HK Q+L ++ ++ + + ++ +T+ IL ++ K K+
Sbjct: 490 ALLLLHKMQNLERKVSKGASRVSLKPNS---ITLMTILPSCAALSALAKGKE 538
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 155/295 (52%), Gaps = 12/295 (4%)
Query: 50 MDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
+++++TG+ A L + N+ + ++ Y ++ + +FD M +R +
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNA 374
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRS-GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL 168
+I GYS+++ EA LF+ M S G + T ++ C +H VVK
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 434
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF 228
G D + N+L+D Y ++ +D+A +++ +M RD VT+N +I GY +++A+ L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 229 MEMRDL-----------GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
+M++L + + T +L + L +A G++IH YA+K L +V V
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 278 GNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
G+AL+D Y+K CL +RK+F ++P+ + +++N++I AY G +E+I+L R +
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 11/190 (5%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
R+ N ++ Y + GK+ IA IF M +R+ VT+ +I GY S+ +A L +M
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 131 -----------CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNS 179
R KP+ +T +T+L C + ++H++ +K + V + ++
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
L+D Y K C+ ++ +++ ++PQ++ +T+N +I Y G +EAI L M G + +
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 617
Query: 240 DFTFQAVLYA 249
+ TF +V A
Sbjct: 618 EVTFISVFAA 627
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/752 (35%), Positives = 424/752 (56%), Gaps = 13/752 (1%)
Query: 70 YRNTISSNVMISGYLKE-GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFV 128
+RN IS ++ L + G + A++IF S+ + + +L+ G+S ++ + +F
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFA 107
Query: 129 RMCRS-GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
+ +S KP+ T+ +S + + + +H V G DS +++ ++++ Y K
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF 167
Query: 188 HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFET----SDFTF 243
V+ A +++ MP++D++ +N +I+GY E+I++F RDL E+ T
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF---RDLINESCTRLDTTTL 224
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
+L A L ++ G QIH A KT + +V + YSK + LF + +
Sbjct: 225 LDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK 284
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
D V+YN MI Y G + S++LF++L + R+ +T++SL L + +
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS---STLVSLVPVSGHLMLIYAI 341
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHF 423
H + + S V+ AL +Y+K E A ++F + + W AMIS QNG
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLT 401
Query: 424 EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSAL 483
E+++ LF EM++ + + T +L A A L ++SLGK +H + + F SSIY +AL
Sbjct: 402 EDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTAL 461
Query: 484 VDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDS 543
+ MYAKCGS+ +A ++F M ++N V+WN +IS Y +G G+ L +F EM+ G P
Sbjct: 462 IGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTP 521
Query: 544 VSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIA 603
V+FLCV ACSH GLV+EG FNSM Y P +HYA +VD+L R+G +A + I
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIE 581
Query: 604 EMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWE 663
M +P +W ++L +CRIHK+ +LA+ +E+LF ++ + +V +SNI + +
Sbjct: 582 AMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDP-DNVGYHVLLSNIHSADRNYP 640
Query: 664 SVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEG 723
V++ ++R L K P Y+ +EI H+F + D++HPQ+KEI K++ L +M + G
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Query: 724 YVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIK 783
Y P+T ALH+ +E+ + +K HSERLAIAF LI+T G+ I ++KNLR C DCH K
Sbjct: 701 YQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTK 760
Query: 784 VISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+ISKI R I VRD++RFHHFKDG+CSC DYW
Sbjct: 761 LISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/658 (37%), Positives = 381/658 (57%), Gaps = 4/658 (0%)
Query: 161 VHSHVVK-LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEG 219
VH+ +VK L + N LI+ Y K+ + A + + P R+ V++ +LI+G A G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
A+ F EMR G +DFTF A L G+QIH AVK I +VFVG
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 280 ALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR 339
+ D Y K +ARKLF ++PE + ++N I+ G +E+I F + +
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP 207
Query: 340 RNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF 399
+ F L+ ++ L L +G QLH + + D++V V N L+D Y KC++ +E IF
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 400 VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
++ ++ V W ++++A VQN E++ L+ R+D V +SVL A A +A +
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 460 LGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYA 519
LG+ +H++ +++ +I+ GSALVDMY KCG ++D+ Q F EMPE+N+V+ N+LI YA
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 520 SNGDGEATLKLFEEMVL--LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVP 577
G + L LFEEM G P+ ++F+ + +ACS G VE G++ F+SM Y + P
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 578 KREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQL 637
EHY+ IVD+L R+G ++A + I +MP P +W ++ N+CR+H L AAE L
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Query: 638 FNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCA 697
F ++ +D+ +V +SN A AG+W V++ ++ G+ K YSW+ +K++VH F A
Sbjct: 508 FKLDP-KDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQA 566
Query: 698 NDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFAL 757
D++H KEI + L +ME GY PD +L++ +E+ K + +HSE+LA+AF L
Sbjct: 567 KDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGL 626
Query: 758 ISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+S P PI + KNLR C DCH+ K +S V REI VRD++RFH FKDGICSC+DYW
Sbjct: 627 LSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 229/487 (47%), Gaps = 6/487 (1%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
+N +I+ Y K A+ + RN V++T LI G +++ F A F M R G
Sbjct: 45 ANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGV 104
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
P+ TF ++ Q+H+ VK G V + S D YCK D A +
Sbjct: 105 VPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARK 164
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
L+ E+P+R+ T+NA I+ +G +EAI+ F+E R + + TF A L A
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G Q+HG +++ +V V N L+DFY K + + +F +M + VS+ ++ A
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
Y +++ L+ + + + +F +++LS A M L++GR +H+ A+ +
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERT 344
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM-- 433
+ V +ALVDMY KC E++E+ F ++ + V ++I G + +L LF EM
Sbjct: 345 IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAP 404
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGS 492
R T + TF S+L A + ++ G ++ + + G S +VDM + G
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGM 464
Query: 493 LKDAIQIFKEMPERNVVS-WNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLC--V 549
++ A + K+MP + +S W AL +A +G + L E + L + L
Sbjct: 465 VERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNT 524
Query: 550 FTACSHW 556
F A W
Sbjct: 525 FAAAGRW 531
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
R + ++ Y K G + +++ FD M E+N VT LIGGY+ Q A LF M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 131 CR--SGTKPDYVTFVTLLSGCNDPKMIK-GLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
G P+Y+TFV+LLS C+ ++ G+ S G + + ++D +
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 188 HCVDLASQLYKEMPQRDSVT 207
V+ A + K+MP + +++
Sbjct: 463 GMVERAYEFIKKMPIQPTIS 482
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVER------NAVTY 107
+ G + ++ + FD+MP +N ++ N +I GY +G++ +A +F+ M R N +T+
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRS--GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHV 165
L+ S++ K+F M RS G +P + ++ M++ + + +
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSM-RSTYGIEPGAEHYSCIVDMLGRAGMVE---RAYEFI 472
Query: 166 VKLGHDSAVIICNSLIDSYCKMH-----CVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
K+ + + +L ++ C+MH + A L+K P +DS + L +A G
Sbjct: 473 KKMPIQPTISVWGALQNA-CRMHGKPQLGLLAAENLFKLDP-KDSGNHVLLSNTFAAAGR 530
Query: 221 NKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
EA + E++ +G + G G I Q+H + K
Sbjct: 531 WAEANTVREELKGVGIKK-----------GAGYSWITVKNQVHAFQAK 567
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/758 (35%), Positives = 412/758 (54%), Gaps = 106/758 (13%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ------------------ 202
VH +++ G I N LID YCK ++ A QL+ E+ +
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 203 ---------------RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
RD+V YNA+I G+++ AI LF +M+ GF+ +FTF +VL
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 248 YAGIGL--DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK----HDCLVEARKLFYKM 301
AG+ L DD Q H A+K+ + V NAL+ YSK L ARK+F ++
Sbjct: 156 -AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 302 PE-------------------------LDG-------VSYNMMITAYAWTGLIKESINLF 329
E L+G V+YN MI+ Y G +E++ +
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 330 RKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKC 389
R++ + + F + +++ A LQ+G+Q+H+ ++ D N+LV +Y KC
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY-VLRREDFSFHFDNSLVSLYYKC 333
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHF-------------------------- 423
+ +EA IF K+ ++ V W A++S V +GH
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 424 -----EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIY 478
EE LKLFS M+R+ F+ +K+ A L + G+Q H+ +++ GF SS+
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 479 AGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG 538
AG+AL+ MYAKCG +++A Q+F+ MP + VSWNALI+A +G G + ++EEM+ G
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 539 YQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKA 598
+PD ++ L V TACSH GLV++G +YF+SM VY++ P +HYA ++D+LCRSGKF A
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 599 EKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
E +I +PF P +W ++L+ CR+H N +L AA++LF + D Y+ +SN+ A
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT-YMLLSNMHAA 632
Query: 659 AGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQ 718
GQWE V +V+K MR+RG+ K A SW+E++ +VH F +D +HP+ + + + + L ++
Sbjct: 633 TGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKE 692
Query: 719 MEKEGYVPDTSCALHN-EDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTD 777
M + GYVPDTS LH+ E + K + L HSE++A+AF L+ P G+ I + KNLR C D
Sbjct: 693 MRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGD 752
Query: 778 CHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
CH + +S +V R+I +RD RFHHF++G CSC ++W
Sbjct: 753 CHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
>AT5G16860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5543834-5546386 FORWARD
Length = 850
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/787 (34%), Positives = 426/787 (54%), Gaps = 51/787 (6%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTY--TLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
+IS Y+ G LS A + +A Y LI Y + + LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
PD TF + C + ++ H+ + G S V + N+L+ Y + + A ++
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDD 255
+ EM D V++N++I YA G K A+++F M + G + T VL L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G+Q+H +AV + +I N+FVGN L+D Y+K + EA +F M D VS+N M+
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 316 YAWTGLIKESINLFRKLQ--------------FTKYDRRNFPFATM-------------- 347
Y+ G ++++ LF K+Q + Y +R + +
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 348 -------LSLAANMLDLQMGRQLHSQAIVTTAD-------SEVLVANALVDMYAKCRRPE 393
LS A++ L G+++H AI D E +V N L+DMYAKC++ +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 394 EAERIFVKLS--SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA--DQATFASVL 449
A +F LS R V WT MI Q+G ++L+L SEM ++ + T + L
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 450 KASANLASISLGKQLHSYIIRSGFMS-SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV 508
A A+LA++ +GKQ+H+Y +R+ + ++ + L+DMYAKCGS+ DA +F M +N
Sbjct: 485 VACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
Query: 509 VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNS 568
V+W +L++ Y +G GE L +F+EM +G++ D V+ L V ACSH G++++G+ YFN
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604
Query: 569 MTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQD 628
M V+ + P EHYA +VD+L R+G+ + A +LI EMP +P ++W + L+ CRIH +
Sbjct: 605 MKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
Query: 629 LAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEI 688
L + AAE++ + D + Y +SN+ A AG+W+ V +++ MR +G+ K P SWVE
Sbjct: 665 LGEYAAEKITELASNHDGS-YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723
Query: 689 KHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHS 748
F DK HP KEI + ++++ GYVP+T ALH+ D++ K + L HS
Sbjct: 724 IKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHS 783
Query: 749 ERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGI 808
E+LA+A+ +++TP+G+ I + KNLR C DCH A +S+I+ +I +RDSSRFHHFK+G
Sbjct: 784 EKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGS 843
Query: 809 CSCRDYW 815
CSC+ YW
Sbjct: 844 CSCKGYW 850
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 244/526 (46%), Gaps = 57/526 (10%)
Query: 53 VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIG 112
V+ G+ + A L N N +++ Y + LS A+++FD M + V++ +I
Sbjct: 143 VRCGESAHALSLVTGF-ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 113 GYSKSDQFIEAFKLFVRMCRS-GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD 171
Y+K + A ++F RM G +PD +T V +L C Q+H V
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
+ + N L+D Y K +D A+ ++ M +D V++NA++AGY+ G ++A++LF +M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 232 ---------------------RDLGFET--------------SDFTFQAVLYAGIGLDDI 256
R LG+E ++ T +VL + +
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 257 AFGQQIHGYAVKTTLIWNV-------FVGNALLDFYSKHDCLVEARKLFYKMP--ELDGV 307
G++IH YA+K + V N L+D Y+K + AR +F + E D V
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRR--NFPFATMLSLAANMLDLQMGRQLHS 365
++ +MI Y+ G +++ L ++ R F + L A++ L++G+Q+H+
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 366 QAIVTTADS-EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFE 424
A+ ++ + V+N L+DMYAKC +A +F + ++ V WT++++ +G+ E
Sbjct: 502 YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
Query: 425 ESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG---- 480
E+L +F EMRR D T VL A ++ I G + Y R + + G
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVFGVSPGPEHY 618
Query: 481 SALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGE 525
+ LVD+ + G L A+++ +EMP E V W A +S +G E
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE 664
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/647 (39%), Positives = 390/647 (60%), Gaps = 12/647 (1%)
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
N ++ +Y K + +A QL+ E+PQ D+V+YN LI+GYA+ A+ LF MR LGFE
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
FT ++ A D + +Q+H ++V V NA + +YSK L EA +
Sbjct: 138 VDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 298 FYKMPEL-DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
FY M EL D VS+N MI AY +++ L++++ F + F A++L+ ++
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 357 LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE---EAERIFVKLSSRCTVPWTAM 413
L GRQ H + I V + L+D Y+KC + ++E++F ++ S V W M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 414 ISANVQNGHF-EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
IS N EE++K F +M+R D +F V A +NL+S S KQ+H I+S
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 473 FMSS-IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
S+ I +AL+ +Y K G+L+DA +F MPE N VS+N +I YA +G G L L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCR 591
+ M+ G P+ ++F+ V +AC+H G V+EG YFN+M + +K+ P+ EHY+ ++D+L R
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 592 SGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVT 651
+GK ++AE+ I MP+ P + W+++L +CR HKN LA+RAA +L M+ L A PYV
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLA-ATPYVM 554
Query: 652 MSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILK 711
++N+ A+A +WE + V+K+MR + + K P SW+E+K K H+F A D +HP ++E+
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614
Query: 712 IDILSEQMEKEGYVPDTSCALHNEDEDIKVES---LKYHSERLAIAFALISTPEGSPILV 768
++ + ++M+K GYV D A+ EDE + + L +HSE+LA+AF L+ST +G ++V
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVV 674
Query: 769 MKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+KNLR C DCH AIK +S + GREI VRD+ RFH FKDG CSC DYW
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 250/499 (50%), Gaps = 14/499 (2%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ A VK+ ST SN+ + + G+LS AR F N S NV++ Y K+ K
Sbjct: 30 LHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSK 89
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+ IA+++FD + + + V+Y LI GY+ + + A LF RM + G + D T L++
Sbjct: 90 IHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA 149
Query: 149 CNDP-KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ-RDSV 206
C D +IK Q+H V G DS + N+ + Y K + A ++ M + RD V
Sbjct: 150 CCDRVDLIK---QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEV 206
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
++N++I Y +A+ L+ EM GF+ FT +VL A LD + G+Q HG
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 267 VKTTLIWNVFVGNALLDFYSK---HDCLVEARKLFYKMPELDGVSYNMMITAYAWT-GLI 322
+K N VG+ L+DFYSK D + ++ K+F ++ D V +N MI+ Y+ L
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS-EVLVANA 381
+E++ FR++Q + + F + S +N+ +Q+H AI + S + V NA
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA 386
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
L+ +Y K ++A +F ++ V + MI Q+GH E+L L+ M + +
Sbjct: 387 LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPN 446
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG--SALVDMYAKCGSLKDAIQI 499
+ TF +VL A A+ + G++ + ++ F A S ++D+ + G L++A +
Sbjct: 447 KITFVAVLSACAHCGKVDEGQEYFN-TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 500 FKEMPER-NVVSWNALISA 517
MP + V+W AL+ A
Sbjct: 506 IDAMPYKPGSVAWAALLGA 524
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 444 TFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
TF +L S + GK LH+ ++S SS Y + V++Y+KCG L A F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 504 PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
E NV S+N ++ AYA + +LF+E+ QPD+VS+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIP----QPDTVSY 108
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/675 (36%), Positives = 386/675 (57%), Gaps = 5/675 (0%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAV---IICNSLIDSYCKMHCVDLASQLYKEMP 201
LL C + ++ +H+H++ S NSLI+ Y K A +L+ MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG-FETSDFTFQAVLYAGIGLDDIAFGQ 260
+R+ V++ A++ GY N GF+ E +KLF M G ++F V + I G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTG 320
Q HG +K LI + FV N L+ YS EA ++ +P D ++ ++ Y G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 321 LIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN 380
KE +++ RK + N + + L L +N+ DL + Q+HS+ + ++EV
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA 440
AL++MY KC + A+R+F ++ T ++ A Q+ FEE+L LFS+M V
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 441 DQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
++ TFA +L + A L+ + G LH +++SG+ + + G+ALV+MYAK GS++DA + F
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 501 KEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVE 560
M R++V+WN +IS + +G G L+ F+ M+ G P+ ++F+ V ACSH G VE
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 561 EGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
+GL YFN + K + + P +HY IV +L ++G F AE + P + D + W ++LN+
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Query: 621 CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKV 680
C + +N L K+ AE + D+ YV +SNI A++ +WE V KV+ M RG+ K
Sbjct: 517 CYVRRNYRLGKKVAEYAIE-KYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKE 575
Query: 681 PAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIK 740
P SW+ I+++ H+F A D HP++ I K+ + +++ GY PD + A H+ DE+ +
Sbjct: 576 PGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQR 635
Query: 741 VESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSR 800
++L YHSE+LA+A+ LI TPE SP+ V KN+R C DCH+AIK+ISKI R I +RDS+R
Sbjct: 636 EDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNR 695
Query: 801 FHHFKDGICSCRDYW 815
FHHF DG CSC DYW
Sbjct: 696 FHHFLDGQCSCCDYW 710
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 209/444 (47%), Gaps = 3/444 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG-T 135
N +I+ Y+K + A+++FD M ERN V++ ++ GY S E KLF M SG +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
+P+ + C++ I+ Q H +K G S + N+L+ Y A +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
+ ++P D +++ ++GY G KE + + + + F ++ T+ + L L D
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ Q+H V+ V AL++ Y K ++ A+++F + ++ A
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
Y +E++NLF K+ + + FA +L+ A + L+ G LH + + +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
V+V NALV+MYAK E+A + F ++ R V W MIS +G E+L+ F M
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLK 494
++ TF VL+A +++ + G + +++ I + +V + +K G K
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFK 492
Query: 495 DAIQIFKEMP-ERNVVSWNALISA 517
DA + P E +VV+W L++A
Sbjct: 493 DAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 155/344 (45%), Gaps = 9/344 (2%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLV-----QTGQLSEARELFDQMPYRNTIS----SNVMISG 82
++ K+ F SR N + +V +G++ E ++ IS N ++
Sbjct: 121 KLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYM 180
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y A + D + + ++ + GY + F E + + + +T+
Sbjct: 181 YSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTY 240
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
++ L ++ + + QVHS +V+ G ++ V C +LI+ Y K V A +++ +
Sbjct: 241 LSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHA 300
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
++ ++ Y + +EA+ LF +M +++TF +L + L + G +
Sbjct: 301 QNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL 360
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
HG +K+ +V VGNAL++ Y+K + +ARK F M D V++N MI+ + GL
Sbjct: 361 HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
+E++ F ++ FT F +L +++ ++ G +Q
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ 464
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/762 (33%), Positives = 430/762 (56%), Gaps = 39/762 (5%)
Query: 89 LSIAKEIFD-SMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
LS AKE+F+ S Y LI GY+ S EA LF+RM SG PD TF LS
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C + Q+H +VK+G+ + + NSL+ Y + +D A +++ EM +R+ V+
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 208 YNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
+ ++I GYA F K+A+ LF M RD + T V+ A L+D+ G++++ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLF--YKMPELDGVSYNMMITAYAWTGLIKE 324
+ + N + +AL+D Y K + + A++LF Y LD N M + Y GL +E
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC--NAMASNYVRQGLTRE 320
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
++ +F + + + +S + + ++ G+ H + +S + NAL+D
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH---------------------- 422
MY KC R + A RIF ++S++ V W ++++ V+NG
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 423 ---------FEESLKLFSEMR-RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
FEE++++F M+ ++ V AD T S+ A +L ++ L K ++ YI ++G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFE 532
+ G+ LVDM+++CG + A+ IF + R+V +W A I A A G+ E ++LF+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRS 592
+M+ G +PD V+F+ TACSH GLV++G F SM K++ + P+ HY +VD+L R+
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 593 GKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM 652
G ++A +LI +MP +P++++W+S+L +CR+ N ++A AAE++ + R + YV +
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS-YVLL 679
Query: 653 SNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKI 712
SN+ A AG+W + KV+ +M+E+GL K P S ++I+ K H F + D++HP+M I +
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAML 739
Query: 713 DILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNL 772
D +S++ G+VPD S L + DE K+ L HSE+LA+A+ LIS+ +G+ I ++KNL
Sbjct: 740 DEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNL 799
Query: 773 RACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDY 814
R C+DCH+ K SK+ REI +RD++RFH+ + G CSC D+
Sbjct: 800 RVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
>AT4G37170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17498580-17500655 REVERSE
Length = 691
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 236/589 (40%), Positives = 363/589 (61%), Gaps = 33/589 (5%)
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G+++H + + + + + N LL Y+K LV+ARK+F +MP D S+N+M+ YA
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 319 TGLIKESINLFRKLQ----------FTKYDRRNFPFATML--SLAANMLD---------- 356
GL++E+ LF ++ T Y +++ P ++ SL + +
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 357 ----------LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
++ G+++H + DS+ ++ ++L+DMY KC +EA IF K+ +
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
V WT+MI ++ + E LFSE+ ++ TFA VL A A+L + LGKQ+H
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
Y+ R GF +A S+LVDMY KCG+++ A + P+ ++VSW +LI A NG +
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
LK F+ ++ G +PD V+F+ V +AC+H GLVE+GL +F S+T+ ++L +HY +V
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 587 DVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDA 646
D+L RSG+F++ + +I+EMP P + +W+S+L C + N DLA+ AA++LF +E +
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEP-ENP 522
Query: 647 APYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMK 706
YVTM+NI A AG+WE GK++K M+E G+TK P SW EIK K H+F A D +HP
Sbjct: 523 VTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYN 582
Query: 707 EIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPI 766
+I+ + L ++M++EGYVP TS LH+ +++ K E+L YHSE+LA+AFA++ST EG+ I
Sbjct: 583 QIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAI 642
Query: 767 LVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
V KNLR+C DCH AIK IS I R+ITVRDS+RFH F++G CSC DYW
Sbjct: 643 KVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 237/531 (44%), Gaps = 52/531 (9%)
Query: 2 KLLHRKIPLKNLSSLAAKNSYPN-VKTCIDAR-----------IVKTGFDPSTSRSNYQI 49
KLL + L + ++Y N ++ C R I +GF P N +
Sbjct: 68 KLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 50 MDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
+ G L +AR++FD+MP R+ S NVM++GY + G L A+++FD M E+++ ++T
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 110 LIGGYSKSDQFIEAFKLFVRMCR-SGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL 168
++ GY K DQ EA L+ M R ++P+ T ++ K I+ ++H H+V+
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF 228
G DS ++ +SL+D Y K C+D A ++ ++ ++D V++ ++I Y +E LF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 229 MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKH 288
E+ +++TF VL A L G+Q+HGY + F ++L+D Y+K
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 289 DCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
+ A+ + P+ D VS+ +I A G E++ F L + + F +L
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 349 SLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV 408
S + LV L Y+ E R+ S +
Sbjct: 428 SACTHA---------------------GLVEKGLEFFYS----ITEKHRL-----SHTSD 457
Query: 409 PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI 468
+T ++ ++G FE+ + SEM + + +ASVL + +I L ++ +
Sbjct: 458 HYTCLVDLLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV-----SWNAL 514
+ + + + ++YA G ++ ++ K M E V SW +
Sbjct: 515 FKIEPENPV-TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/738 (34%), Positives = 422/738 (57%), Gaps = 6/738 (0%)
Query: 80 ISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDY 139
+ G+ + A ++FD M + +A + ++I G++ +IEA + + RM +G K D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 140 VTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE 199
T+ ++ ++ ++H+ V+KLG S V +CNSLI Y K+ C A ++++E
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 200 MPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFG 259
MP+RD V++N++I+GY G ++ LF EM GF+ F+ + L A + G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 260 QQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
++IH +AV++ + +V V ++LD YSK+ + A ++F M + + V++N+MI YA
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
G + ++ F+K+ + + + L A+ +L+ GR +H A+ +++
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE---GRTIHGYAMRRGFLPHMVL 367
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
AL+DMY +C + + AE IF +++ + + W ++I+A VQNG +L+LF E+ ++
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
D T AS+L A A S+S G+++H+YI++S + S+ ++LV MYA CG L+DA +
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
F + ++VVSWN++I AYA +G G ++ LF EM+ P+ +F + ACS G+
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
V+EG YF SM + Y + P EHY ++D++ R+G F A++ + EMPF P +W S+L
Sbjct: 548 VDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
N+ R HK+ +A+ AAEQ+F ME + YV + N+ AEAG+WE V ++K M +G++
Sbjct: 608 NASRNHKDITIAEFAAEQIFKME-HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGIS 666
Query: 679 KVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQM-EKEGYVPDTSCALHNEDE 737
+ + S VE K K H+F D++H +I +D++S + E++ YV S
Sbjct: 667 RTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLV 726
Query: 738 DIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRD 797
+ S + HS RLA F LIST G + V N R C CH ++ S++ REI V D
Sbjct: 727 KSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGD 786
Query: 798 SSRFHHFKDGICSCRDYW 815
S FHHF +G CSC +YW
Sbjct: 787 SKIFHHFSNGRCSCGNYW 804
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 225/467 (48%), Gaps = 51/467 (10%)
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDL----------GFETSDFTFQAV 246
YK Q + + G+A+ ++A++LF EM GF + +AV
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV 115
Query: 247 ------LYAGIGLDDIAF---------------GQQIHGYAVKTTLIWNVFVGNALLDFY 285
++AG+ D + G++IH +K + +V+V N+L+ Y
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
K C +A K+F +MPE D VS+N MI+ Y G S+ LF+++ + F
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTM 235
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADS-EVLVANALVDMYAKCRRPEEAERIFVKLSS 404
+ L +++ +MG+++H A+ + ++ +V+V +++DMY+K AERIF +
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ 295
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEMRRDN-VTADQATFASVLKASANLASISLGKQ 463
R V W MI +NG ++ F +M N + D T ++L ASA L G+
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRT 351
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
+H Y +R GF+ + +AL+DMY +CG LK A IF M E+NV+SWN++I+AY NG
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ L+LF+E+ PDS + + A + + EG +++ + K +++
Sbjct: 412 NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEG-------REIHAYIVKSRYWS 464
Query: 584 ------SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
S+V + G + A K + D + W+SI+ + +H
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILL-KDVVSWNSIIMAYAVH 510
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 243/504 (48%), Gaps = 18/504 (3%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISS----NVMISGYLKE 86
+R+V G T + I + L E +++ + +S N +IS Y+K
Sbjct: 119 SRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL 178
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
G A+++F+ M ER+ V++ +I GY + LF M + G KPD + ++ L
Sbjct: 179 GCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSAL 238
Query: 147 SGCN---DPKMIKGLFQVHSHVVKLGHDSA-VIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
C+ PKM K ++H H V+ ++ V++ S++D Y K V A +++ M Q
Sbjct: 239 GACSHVYSPKMGK---EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ 295
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDL-GFETSDFTFQAVLYAGIGLDDIAFGQQ 261
R+ V +N +I YA G +A F +M + G + T +L A L+ G+
Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRT 351
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
IHGYA++ + ++ + AL+D Y + L A +F +M E + +S+N +I AY G
Sbjct: 352 IHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGK 411
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
++ LF++L + + A++L A L L GR++H+ + + S ++ N+
Sbjct: 412 NYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNS 471
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
LV MYA C E+A + F + + V W ++I A +G S+ LFSEM V +
Sbjct: 472 LVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
++TFAS+L A + + G + + R G I ++D+ + G+ A +
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 501 KEMPERNVVS-WNALISAYASNGD 523
+EMP W +L++A ++ D
Sbjct: 592 EEMPFVPTARIWGSLLNASRNHKD 615
>AT3G24000.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: shoot apex, carpel; EXPRESSED DURING:
petal differentiation and expansion stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 15874 Blast hits to 5333
proteins in 187 species: Archae - 1; Bacteria - 6;
Metazoa - 100; Fungi - 81; Plants - 15349; Viruses - 0;
Other Eukaryotes - 337 (source: NCBI BLink). |
chr3:8672774-8674881 FORWARD
Length = 665
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/549 (40%), Positives = 351/549 (63%), Gaps = 2/549 (0%)
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G+ +H + +++ ++ +GN LL+ Y+K L EARK+F KMP+ D V++ +I+ Y+
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
+++ F ++ Y F ++++ AA G QLH + DS V V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
+AL+D+Y + ++A+ +F L SR V W A+I+ + + E++L+LF M RD
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
++AS+ A ++ + GK +H+Y+I+SG +AG+ L+DMYAK GS+ DA +
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
IF + +R+VVSWN+L++AYA +G G+ + FEEM +G +P+ +SFL V TACSH GL
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
++EG Y+ M K +VP+ HY ++VD+L R+G ++A + I EMP +P +W ++L
Sbjct: 379 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
N+CR+HKN +L AAE +F ++ D P+V + NI A G+W +V+K M+E G+
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDP-DDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496
Query: 679 KVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDED 738
K PA SWVEI++ +H+F AND+ HPQ +EI K + + ++++ GYVPDTS + + D+
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQ 556
Query: 739 IKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDS 798
+ +L+YHSE++A+AFAL++TP GS I + KN+R C DCH AIK+ SK+VGREI VRD+
Sbjct: 557 EREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDT 616
Query: 799 SRFHHFKDG 807
+RFHHFKD
Sbjct: 617 NRFHHFKDA 625
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 203/381 (53%), Gaps = 1/381 (0%)
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
D + TLL C K++ VH+H+++ +++ N+L++ Y K ++ A +++
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
++MPQRD VT+ LI+GY+ +A+ F +M G+ ++FT +V+ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA 317
G Q+HG+ VK NV VG+ALLD Y+++ + +A+ +F + + VS+N +I +A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
++++ LF+ + + +F +A++ ++ L+ G+ +H+ I +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
N L+DMYAK +A +IF +L+ R V W ++++A Q+G +E++ F EMRR
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
+ ++ +F SVL A ++ + G + + + G + + +VD+ + G L A+
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 498 QIFKEMP-ERNVVSWNALISA 517
+ +EMP E W AL++A
Sbjct: 419 RFIEEMPIEPTAAIWKALLNA 439
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 157/288 (54%), Gaps = 6/288 (2%)
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
DRR + T+L L GR +H+ + + ++++ N L++MYAKC EEA +
Sbjct: 59 DRRFY--NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
+F K+ R V WT +IS Q+ ++L F++M R + ++ T +SV+KA+A
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 458 ISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISA 517
G QLH + ++ GF S+++ GSAL+D+Y + G + DA +F + RN VSWNALI+
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV-YKLV 576
+A E L+LF+ M+ G++P S+ +F ACS G +E+G M K KLV
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 577 PKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
+ +++D+ +SG A K+ + D + W+S+L + H
Sbjct: 297 AFAGN--TLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 238/516 (46%), Gaps = 62/516 (12%)
Query: 49 IMDLVQTGQLSEARELFDQMPYRNTIS-SNVMISGYLKEGKLSIAKEIFDSMVERNAVTY 107
+ L+ G++ A L Q +R+ I N +++ Y K G L A+++F+ M +R+ VT+
Sbjct: 72 VFKLLIQGRIVHAHIL--QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTW 129
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK 167
T LI GYS+ D+ +A F +M R G P+ T +++ + Q+H VK
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 168 LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKL 227
G DS V + ++L+D Y + +D A ++ + R+ V++NALIAG+A ++A++L
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
F M GF S F++ ++ A + G+ +H Y +K+ F GN LLD Y+K
Sbjct: 250 FQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAK 309
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
+ +ARK+F ++ + D VS+N ++TAYA G KE++ F +++ F ++
Sbjct: 310 SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSV 369
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI-FVKLSSRC 406
L+ ++ L G + E++ + +V PE + V L R
Sbjct: 370 LTACSHSGLLDEGWHYY----------ELMKKDGIV--------PEAWHYVTVVDLLGRA 411
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
G +L+ EM + A++ KA N + +L +
Sbjct: 412 --------------GDLNRALRFIEEMPIEPT-------AAIWKALLNACRMHKNTELGA 450
Query: 467 YIIRSGF-MSSIYAGSALV--DMYAKCGSLKDAIQIFKEMPERNV-----VSWNAL---I 515
Y F + G ++ ++YA G DA ++ K+M E V SW + I
Sbjct: 451 YAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAI 510
Query: 516 SAYASNGD----GEATLKLFEEMVL----LGYQPDS 543
+ +N + E + +EE++ LGY PD+
Sbjct: 511 HMFVANDERHPQREEIARKWEEVLAKIKELGYVPDT 546
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 70/117 (59%)
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
+ AD+ + ++LK + G+ +H++I++S F I G+ L++MYAKCGSL++A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 498 QIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
++F++MP+R+ V+W LIS Y+ + L F +M+ GY P+ + V A +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/665 (35%), Positives = 388/665 (58%), Gaps = 2/665 (0%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N ++ +I YL+ GK+ + ++FD +++++ V + +++ GY+K K F M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
P+ VTF +LS C +I Q+H VV G D I NSL+ Y K D
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
AS+L++ M + D+VT+N +I+GY G +E++ F EM G TF ++L +
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
+++ + +QIH Y ++ ++ ++F+ +AL+D Y K + A+ +F + +D V +
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
MI+ Y GL +S+ +FR L K ++L + +L L++GR+LH I
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
D+ + A++DMYAKC R A IF +LS R V W +MI+ Q+ + ++ +F
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+M + D + ++ L A ANL S S GK +H ++I+ S +Y+ S L+DMYAKCG
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV-LLGYQPDSVSFLCVF 550
+LK A+ +FK M E+N+VSWN++I+A ++G + +L LF EMV G +PD ++FL +
Sbjct: 592 NLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
++C H G V+EG+R+F SMT+ Y + P++EHYA +VD+ R+G+ +A + + MPF PD
Sbjct: 652 SSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPD 711
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKK 670
+W ++L +CR+HKN +LA+ A+ +L +++ ++ YV +SN A A +WESV KV+
Sbjct: 712 AGVWGTLLGACRLHKNVELAEVASSKLMDLDP-SNSGYYVLISNAHANAREWESVTKVRS 770
Query: 671 AMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSC 730
M+ER + K+P YSW+EI + H+F + D NHP+ I ++ L ++ EGY+P
Sbjct: 771 LMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYL 830
Query: 731 ALHNE 735
LH E
Sbjct: 831 PLHPE 835
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 263/515 (51%), Gaps = 2/515 (0%)
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
+I + ++ +A + +M G PD TF L+ C K KG+ + V LG
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
D + +SLI +Y + +D+ S+L+ + Q+D V +N ++ GYA G IK F
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS 228
Query: 230 EMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
MR + TF VL I G Q+HG V + + + + N+LL YSK
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 290 CLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
+A KLF M D V++N MI+ Y +GL++ES+ F ++ + F+++L
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
+ +L+ +Q+H + + ++ + +AL+D Y KCR A+ IF + +S V
Sbjct: 349 SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVV 408
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
+TAMIS + NG + +SL++F + + ++ ++ T S+L L ++ LG++LH +II
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFII 468
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLK 529
+ GF + G A++DMYAKCG + A +IF+ + +R++VSWN++I+ A + + A +
Sbjct: 469 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAID 528
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVL 589
+F +M + G D VS +AC++ G M K + L ++++D+
Sbjct: 529 IFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMY 587
Query: 590 CRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
+ G A + M + + + W+SI+ +C H
Sbjct: 588 AKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 182 bits (462), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 156/650 (24%), Positives = 284/650 (43%), Gaps = 79/650 (12%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI-DSYCKMHCV----------DLA 193
LL C++P +++ QVH A +I NS+ DSY + D
Sbjct: 41 LLQACSNPNLLRQGKQVH----------AFLIVNSISGDSYTDERILGMYAMCGSFSDCG 90
Query: 194 SQLYKEMPQRDSV-TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
Y+ +R S+ +N++I+ + G +A+ + +M G TF ++ A +
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA 150
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
L + + + N FV ++L+ Y ++ + KLF ++ + D V +N+M
Sbjct: 151 LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
+ YA G + I F ++ + F +LS+ A+ L + +G QLH +V+
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
D E + N+L+ MY+KC R ++A ++F +S TV W MIS VQ+G EESL F E
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
M V D TF+S+L + + ++ KQ+H YI+R I+ SAL+D Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
+ A IF + +VV + A+IS Y NG +L++F +V + P+ ++ + +
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 553 CS-----------HWGLVEEGLR-----------------YFNSMTKVYKLVPKRE--HY 582
H ++++G N ++++ + KR+ +
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 583 ASIVDVLCRSGKFDKAEKLIAEMPFDP---DEIMWSSILNSCRIHKNQDLAKRAAEQLFN 639
S++ +S A + +M D + S+ L++C ++ K +
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 640 MEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCAND 699
+ D T+ ++ A+ G ++ V K M+E+ + SW I A
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV-----SWNSI-------IAAC 618
Query: 700 KNHPQMKEIILKIDILSEQMEKEGYVPD---------TSCALHNEDEDIK 740
NH ++K+ + + E +EK G PD + C + + DE ++
Sbjct: 619 GNHGKLKD---SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/659 (34%), Positives = 387/659 (58%), Gaps = 4/659 (0%)
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYAN 217
L Q+H+ ++ LG + + LI + + A Q++ ++P+ +NA+I GY+
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
++A+ ++ M+ FTF +L A GL + G+ +H + +VFV
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 278 GNALLDFYSKHDCLVEARKLF--YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFT 335
N L+ Y+K L AR +F +PE VS+ +++AYA G E++ +F +++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 336 KYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEA 395
++L+ + DL+ GR +H+ + + E + +L MYAKC + A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 396 ERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
+ +F K+ S + W AMIS +NG+ E++ +F EM +V D + S + A A +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 456 ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALI 515
S+ + ++ Y+ RS + ++ SAL+DM+AKCGS++ A +F +R+VV W+A+I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL 575
Y +G + L+ M G P+ V+FL + AC+H G+V EG +FN M +K+
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKI 455
Query: 576 VPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
P+++HYA ++D+L R+G D+A ++I MP P +W ++L++C+ H++ +L + AA+
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIF 695
QLF+++ + YV +SN+ A A W+ V +V+ M+E+GL K SWVE++ ++ F
Sbjct: 516 QLFSIDP-SNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 574
Query: 696 CANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAF 755
DK+HP+ +EI +++ + ++++ G+V + +LH+ +++ E+L HSER+AIA+
Sbjct: 575 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634
Query: 756 ALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDY 814
LISTP+G+P+ + KNLRAC +CHAA K+ISK+V REI VRD++RFHHFKDG+CSC DY
Sbjct: 635 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 208/434 (47%), Gaps = 3/434 (0%)
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
G ++ A+++FD + + +I GYS+++ F +A ++ M + PD TF LL
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK--EMPQRD 204
C+ ++ VH+ V +LG D+ V + N LI Y K + A +++ +P+R
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
V++ A+++ YA G EA+++F +MR + + +VL A L D+ G+ IH
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
VK L + +L Y+K + A+ LF KM + + +N MI+ YA G +E
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
+I++F ++ + +S A + L+ R ++ + +V +++AL+D
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
M+AKC E A +F + R V W+AMI +G E++ L+ M R V + T
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
F +L A + + G + + + ++D+ + G L A ++ K MP
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 505 -ERNVVSWNALISA 517
+ V W AL+SA
Sbjct: 487 VQPGVTVWGALLSA 500
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 144/274 (52%), Gaps = 2/274 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMV--ERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG 134
N +I+ Y K +L A+ +F+ + ER V++T ++ Y+++ + +EA ++F +M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
KPD+V V++L+ + +K +H+ VVK+G + + SL Y K V A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
L+ +M + + +NA+I+GYA G+ +EAI +F EM + + + + A +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+ + ++ Y ++ +VF+ +AL+D ++K + AR +F + + D V ++ MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
Y G +E+I+L+R ++ + F +L
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 74 ISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
IS N M Y K G+++ AK +FD M N + + +I GY+K+ EA +F M
Sbjct: 261 ISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLA 193
+PD ++ + +S C ++ ++ +V + + V I ++LID + K V+ A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
++ RD V ++A+I GY G +EAI L+ M G +D TF +L A
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 18 AKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFD---QMPYRNTI 74
AKN Y + ++ P T I Q G L +AR +++ + YR+ +
Sbjct: 299 AKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV 358
Query: 75 -SSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
S+ +I + K G + A+ +FD ++R+ V ++ +I GY + EA L+ M R
Sbjct: 359 FISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV--KLGHDSAVIICNSLIDSYCKMHCVD 191
G P+ VTF+ LL CN M++ + + + K+ C +ID + +D
Sbjct: 419 GVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC--VIDLLGRAGHLD 476
Query: 192 LASQLYKEMPQRDSVT-YNALIAG 214
A ++ K MP + VT + AL++
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSA 500
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/704 (34%), Positives = 385/704 (54%), Gaps = 13/704 (1%)
Query: 115 SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV 174
SK + EAF+ M ++G ++ L C + + + +H + + +V
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDL 234
++ N ++ YC+ ++ A +L+ EM + ++V+ +I+ YA +G +A+ LF M
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 235 GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEA 294
G + + +L + + + FG+QIH + ++ L N + +++ Y K LV A
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 295 RKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANM 354
+++F +M V+ ++ Y G ++++ LF L + +F F+ +L A++
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
+L +G+Q+H+ +SEV V LVD Y KC E A R F ++ V W+A+I
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTA-DQATFASVLKASANLASISLGKQLHSYIIRSGF 473
S Q FEE++K F +R N + + T+ S+ +A + LA ++G Q+H+ I+
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEE 533
+ S Y SAL+ MY+KCG L DA ++F+ M ++V+W A IS +A G+ L+LFE+
Sbjct: 419 IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 478
Query: 534 MVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSG 593
MV G +P+SV+F+ V TACSH GLVE+G ++M + Y + P +HY ++D+ RSG
Sbjct: 479 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Query: 594 KFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMS 653
D+A K + MPF+PD + W L+ C HKN +L + A E+L ++ D A YV
Sbjct: 539 LLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDP-EDTAGYVLPF 597
Query: 654 NILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKID 713
N+ AG+WE ++ K M ER L K + SW++ K K+H F DK+HPQ +EI K+
Sbjct: 598 NLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLK 657
Query: 714 ILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEG--SPILVMKN 771
ME + + C + + E L HSERLAIAF LIS +PI V KN
Sbjct: 658 EFDGFMEGDMF----QCNMTE-----RREQLLDHSERLAIAFGLISVHGNAPAPIKVFKN 708
Query: 772 LRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
LRAC DCH K +S + G EI +RDS RFHHFK+G CSC DYW
Sbjct: 709 LRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 230/467 (49%), Gaps = 7/467 (1%)
Query: 58 LSEARELFDQM----PYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
LS R L D+M + + N ++ Y + L A ++FD M E NAV+ T +I
Sbjct: 99 LSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISA 158
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
Y++ +A LF M SG KP + TLL +P+ + Q+H+HV++ G S
Sbjct: 159 YAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSN 218
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
I +++ Y K + A +++ +M + V L+ GY G ++A+KLF+++
Sbjct: 219 TSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVT 278
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
G E F F VL A L+++ G+QIH K L V VG L+DFY K
Sbjct: 279 EGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFES 338
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAA 352
A + F ++ E + VS++ +I+ Y +E++ F+ L+ N F + ++ +
Sbjct: 339 ACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ D +G Q+H+ AI + +AL+ MY+KC ++A +F + + V WTA
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTA 458
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS- 471
IS + G+ E+L+LF +M + + TF +VL A ++ + GK ++R
Sbjct: 459 FISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKY 518
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
+I ++D+YA+ G L +A++ K MP E + +SW +S
Sbjct: 519 NVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 163/333 (48%), Gaps = 3/333 (0%)
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
K+ G N+ + + + + E+ +++ ++ + + + L
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQ 419
GR LH + + + VL+ N ++ MY +CR E+A+++F ++S V T MISA +
Sbjct: 102 GRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAE 161
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
G ++++ LFS M + + ++LK+ N ++ G+Q+H+++IR+G S+
Sbjct: 162 QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSI 221
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
+ +V+MY KCG L A ++F +M + V+ L+ Y G LKLF ++V G
Sbjct: 222 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGV 281
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
+ DS F V AC+ + G + + K+ L + +VD + F+ A
Sbjct: 282 EWDSFVFSVVLKACASLEELNLGKQIHACVAKL-GLESEVSVGTPLVDFYIKCSSFESAC 340
Query: 600 KLIAEMPFDPDEIMWSSILNS-CRIHKNQDLAK 631
+ E+ +P+++ WS+I++ C++ + ++ K
Sbjct: 341 RAFQEIR-EPNDVSWSAIISGYCQMSQFEEAVK 372
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 170/373 (45%), Gaps = 41/373 (10%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I A +++ G +TS + V+ G L A+ +FDQM + ++ ++ GY + G+
Sbjct: 206 IHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGR 265
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+A KLFV + G + D F +L
Sbjct: 266 AR-------------------------------DALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C + + Q+H+ V KLG +S V + L+D Y K + A + ++E+ + + V++
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 354
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFET-SDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+A+I+GY +EA+K F +R + FT+ ++ A L D G Q+H A+
Sbjct: 355 SAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAI 414
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
K +LI + + +AL+ YSK CL +A ++F M D V++ I+ +A+ G E++
Sbjct: 415 KRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ-----LHSQAIVTTADSEVLVANAL 382
LF K+ + F +L+ ++ ++ G+ L + T D + +
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH----YDCM 530
Query: 383 VDMYAKCRRPEEA 395
+D+YA+ +EA
Sbjct: 531 IDIYARSGLLDEA 543
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/694 (35%), Positives = 392/694 (56%), Gaps = 9/694 (1%)
Query: 124 FKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
F+L C + T F LL C D + I G+ + +H++K G A I + L+D+
Sbjct: 52 FRLLCITCDTLTTTH--NFSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDA 108
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
K +D A Q++ M +R VT+N+LIA +KEA++++ M ++T
Sbjct: 109 SLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+V A L Q+ HG AV L + NVFVG+AL+D Y K EA+ + ++
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVE 228
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ 362
E D V +I Y+ G E++ F+ + K + +A++L N+ D+ G+
Sbjct: 229 EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKL 288
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH 422
+H + + +S + +L+ MY +C +++ R+F + V WT++IS VQNG
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR 348
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
E +L F +M RD++ + T +S L+ +NLA G+Q+H + + GF YAGS
Sbjct: 349 EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG 408
Query: 483 LVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
L+D+Y KCG A +F + E +V+S N +I +YA NG G L LFE M+ LG QP+
Sbjct: 409 LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPN 468
Query: 543 SVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLI 602
V+ L V AC++ LVEEG F+S K K++ +HYA +VD+L R+G+ ++AE L
Sbjct: 469 DVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEAEMLT 527
Query: 603 AEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQW 662
E+ +PD ++W ++L++C++H+ ++A+R ++ +E D + MSN+ A G+W
Sbjct: 528 TEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEP-GDEGTLILMSNLYASTGKW 585
Query: 663 ESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDK-NHPQMKEIILKIDILSEQMEK 721
V ++K M++ L K PA SWVEI + H F A D +HP ++I+ ++ L ++ +
Sbjct: 586 NRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKD 645
Query: 722 EGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAA 781
GYV D SC + +E K SL HSE+LAIAFA+ GS I ++KNLR C DCH+
Sbjct: 646 LGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGS-IRILKNLRVCVDCHSW 704
Query: 782 IKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
IK++S+++ REI RDS RFHHF+DG CSC DYW
Sbjct: 705 IKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 209/445 (46%), Gaps = 1/445 (0%)
Query: 74 ISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
IS + ++ LK G + A+++FD M ER+ VT+ LI K + EA +++ M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD-SAVIICNSLIDSYCKMHCVDL 192
PD T ++ +D + K + H V LG + S V + ++L+D Y K
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
A + + ++D V ALI GY+ +G + EA+K F M + +++T+ +VL +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
L DI G+ IHG VK+ + +LL Y + + ++ ++F + + VS+ +
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
I+ G + ++ FRK+ +F ++ L +N+ + GRQ+H
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF 399
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
D + + L+D+Y KC + A +F LS + MI + QNG E+L LF
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFER 459
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
M + + T SVL A N + G +L + M + + +VD+ + G
Sbjct: 460 MINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGR 519
Query: 493 LKDAIQIFKEMPERNVVSWNALISA 517
L++A + E+ ++V W L+SA
Sbjct: 520 LEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 8/371 (2%)
Query: 50 MDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
+ L + Q S + + N + ++ Y+K GK AK + D + E++ V T
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 237
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
LI GYS+ + EA K F M +P+ T+ ++L C + K I +H +VK G
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
+SA+ SL+ Y + VD + +++K + + V++ +LI+G G + A+ F
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 230 EMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
+M + + FT + L L G+QIHG K + + G+ L+D Y K
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 290 CLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
C AR +F + E+D +S N MI +YA G +E+++LF ++ + ++L
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 350 LAANMLDLQMGRQL----HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
N ++ G +L I+ T D +VD+ + R EEAE + ++ +
Sbjct: 478 ACNNSRLVEEGCELFDSFRKDKIMLTNDHYA----CMVDLLGRAGRLEEAEMLTTEVINP 533
Query: 406 CTVPWTAMISA 416
V W ++SA
Sbjct: 534 DLVLWRTLLSA 544
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/747 (32%), Positives = 408/747 (54%), Gaps = 8/747 (1%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
N ++S Y G ++ A ++FD M ERN V++ +I +S + E+F L M
Sbjct: 225 GNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENG 284
Query: 136 K----PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
PD T VT+L C + I VH VKL D +++ N+L+D Y K C+
Sbjct: 285 DGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCIT 344
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG--FETSDFTFQAVLYA 249
A ++K ++ V++N ++ G++ EG + +M G + + T +
Sbjct: 345 NAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 404
Query: 250 GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSY 309
+ +++H Y++K ++N V NA + Y+K L A+++F+ + S+
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSW 464
Query: 310 NMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIV 369
N +I +A + + S++ +++ + +F ++LS + + L++G+++H I
Sbjct: 465 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 370 TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKL 429
+ ++ V +++ +Y C + +F + + V W +I+ +QNG + +L +
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 430 FSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAK 489
F +M + + V A + L S+ LG++ H+Y ++ + +L+DMYAK
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 490 CGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCV 549
GS+ + ++F + E++ SWNA+I Y +G + +KLFEEM G+ PD ++FL V
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIA-EMPFD 608
TAC+H GL+ EGLRY + M + L P +HYA ++D+L R+G+ DKA +++A EM +
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 609 PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKV 668
D +W S+L+SCRIH+N ++ ++ A +LF +E YV +SN+ A G+WE V KV
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP-EKPENYVLLSNLYAGLGKWEDVRKV 823
Query: 669 KKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDT 728
++ M E L K SW+E+ KV F ++ +EI IL ++ K GY PDT
Sbjct: 824 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 883
Query: 729 SCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKI 788
H+ E+ K+E L+ HSE+LA+ + LI T EG+ I V KNLR C DCH A K+ISK+
Sbjct: 884 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 943
Query: 789 VGREITVRDSSRFHHFKDGICSCRDYW 815
+ REI VRD+ RFHHFK+G+CSC DYW
Sbjct: 944 MEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 152/570 (26%), Positives = 274/570 (48%), Gaps = 12/570 (2%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR-SGTKP 137
+I+ Y G ++ +FD++ +N + +I YS+++ + E + F+ M + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
D+ T+ ++ C + VH VVK G V + N+L+ Y V A QL+
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR----DLGFETSDFTFQAVLYAGIGL 253
MP+R+ V++N++I +++ GF++E+ L EM D F T VL
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 254 DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMI 313
+I G+ +HG+AVK L + + NAL+D YSK C+ A+ +F + VS+N M+
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD--LQMGRQLHSQAIVTT 371
++ G + ++ R++ D + + ++ + L ++LH ++
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
LVANA V YAKC A+R+F + S+ W A+I + Q+ SL
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+M+ + D T S+L A + L S+ LGK++H +IIR+ ++ +++ +Y CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
L +F M ++++VSWN +I+ Y NG + L +F +MVL G Q +S + VF
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
ACS + G R ++ + L S++D+ ++G ++ K+ + +
Sbjct: 606 ACSLLPSLRLG-REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKST 663
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
W++++ IH LAK A + M+
Sbjct: 664 ASWNAMIMGYGIH---GLAKEAIKLFEEMQ 690
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 210/415 (50%), Gaps = 17/415 (4%)
Query: 151 DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNA 210
D +M + + Q+ S +L +D ++C +I Y D + ++ + ++ +NA
Sbjct: 99 DIEMGRKIHQLVSGSTRLRNDD--VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNA 156
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSD-----FTFQAVLYAGIGLDDIAFGQQIHGY 265
+I+ Y+ E ++ F+EM T+D FT+ V+ A G+ D+ G +HG
Sbjct: 157 VISSYSRNELYDEVLETFIEM----ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKES 325
VKT L+ +VFVGNAL+ FY H + +A +LF MPE + VS+N MI ++ G +ES
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 326 INLFRKLQFTKYDRRNFP----FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
L ++ D P T+L + A ++ +G+ +H A+ D E+++ NA
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNA 332
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM--RRDNVT 439
L+DMY+KC A+ IF +++ V W M+ G + + +M ++V
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
AD+ T + + + + + K+LH Y ++ F+ + +A V YAKCGSL A ++
Sbjct: 393 ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRV 452
Query: 500 FKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
F + + V SWNALI +A + D +L +M + G PDS + + +ACS
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 213/452 (47%), Gaps = 5/452 (1%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
+ + +N ++ Y K G ++ A+ IF +N V++ ++GG+S F + +M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 131 CRSG--TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMH 188
G K D VT + + C + L ++H + +K ++ N+ + SY K
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 189 CVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
+ A +++ + + ++NALI G+A + ++ ++M+ G FT ++L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
A L + G+++HG+ ++ L ++FV ++L Y L + LF M + VS
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
+N +IT Y G ++ +FR++ + + + L++GR+ H+ A+
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
+ + +A +L+DMYAK ++ ++F L + T W AMI +G +E++K
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 429 LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMY 487
LF EM+R D TF VL A + I G + + S G ++ + ++DM
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 488 AKCGSLKDAIQIFKE--MPERNVVSWNALISA 517
+ G L A+++ E E +V W +L+S+
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 119/217 (54%), Gaps = 6/217 (2%)
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTA-DSEVLVANALVDMYAKCRRPEEAERIFVKL 402
+L + D++MGR++H +T ++ ++ ++ MYA C P+++ +F L
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 403 SSRCTVPWTAMISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLG 461
S+ W A+IS+ +N ++E L+ F EM ++ D T+ V+KA A ++ + +G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASN 521
+H ++++G + ++ G+ALV Y G + DA+Q+F MPERN+VSWN++I ++ N
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 522 GDGEATLKLFEEMVLL----GYQPDSVSFLCVFTACS 554
G E + L EM+ + PD + + V C+
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
>AT1G08070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2514374-2516599 REVERSE
Length = 741
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/710 (34%), Positives = 395/710 (55%), Gaps = 42/710 (5%)
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYC----KMHCVDLASQLYK 198
++LL C K ++ L +H+ ++K+G + + LI+ +C + A ++K
Sbjct: 37 LSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFK 92
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
+ + + + +N + G+A A+KL++ M LG + +TF VL +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKE 152
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSY--------- 309
GQQIHG+ +K +++V +L+ Y ++ L +A K+F K P D VSY
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 310 ----------------------NMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
N MI+ YA TG KE++ LF+ + T T+
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT 407
+S A +++GRQ+H S + + NAL+D+Y+KC E A +F +L +
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
+ W +I ++E+L LF EM R T + T S+L A A+L +I +G+ +H Y
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY 392
Query: 468 IIR--SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
I + G ++ ++L+DMYAKCG ++ A Q+F + +++ SWNA+I +A +G +
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
A+ LF M +G QPD ++F+ + +ACSH G+++ G F +MT+ YK+ PK EHY +
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 512
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD 645
+D+L SG F +AE++I M +PD ++W S+L +C++H N +L + AE L +E +
Sbjct: 513 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEP-EN 571
Query: 646 AAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQM 705
YV +SNI A AG+W V K + + ++G+ KVP S +EI VH F DK HP+
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631
Query: 706 KEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSP 765
+EI ++ + +EK G+VPDTS L +E+ K +L++HSE+LAIAF LIST G+
Sbjct: 632 REIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTK 691
Query: 766 ILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+ ++KNLR C +CH A K+ISKI REI RD +RFHHF+DG+CSC DYW
Sbjct: 692 LTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 257/589 (43%), Gaps = 73/589 (12%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I A+++K G +NY + L++ LS F+ +PY
Sbjct: 52 IHAQMIKIGLH----NTNYALSKLIEFCILSPH---FEGLPY------------------ 86
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
A +F ++ E N + + + G++ S + A KL+V M G P+ TF +L
Sbjct: 87 ---AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 149 CNDPKMIKGLFQVHSHVVKLGHD-------------------------------SAVIIC 177
C K K Q+H HV+KLG D V+
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+LI Y ++ A +L+ E+P +D V++NA+I+GYA G KEA++LF +M
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
+ T V+ A I G+Q+H + N+ + NAL+D YSK L A L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
F ++P D +S+N +I Y L KE++ LF+++ + + ++L A++ +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 358 QMGRQLH-----SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+GR +H VT A S + +L+DMYAKC E A ++F + + W A
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASS---LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
MI +G + S LFS MR+ + D TF +L A ++ + LG+ + + +
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 473 FMSS-IYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKL 530
M+ + ++D+ G K+A ++ M + V W +L+ A +G+ E
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
Query: 531 FEEMVLLGYQ-PDSVSFLC-VFTACSHWGLVEEGLRYFNSMTKVYKLVP 577
E ++ + + P S L ++ + W V + N K K VP
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLND--KGMKKVP 607
>AT3G49140.2 | Symbols: | EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1). |
chr3:18213981-18217848 REVERSE
Length = 896
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/667 (36%), Positives = 369/667 (55%), Gaps = 49/667 (7%)
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNS-----LIDSYCKMHCVDLASQLYKEMPQRDSVTYN 209
I+ L VHS ++ + CNS L+ +Y + V A +++ E+P+R+ + N
Sbjct: 55 IRTLRTVHSRIIL-----EDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIIN 109
Query: 210 ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT 269
+I Y N GF E +K+F M +TF VL A I G++IHG A K
Sbjct: 110 VMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLF 329
L +FVGN L+ Y K L EAR + +M D VS+N ++ YA +++ +
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 330 RKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKC 389
R+++ K A++L +N TT ++ MY K
Sbjct: 230 REMESVKISHDAGTMASLLPAVSN----------------TTTENV---------MYVK- 263
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
+F K+ + V W MI ++N E+++L+S M D D + SVL
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV 509
A + +++SLGK++H YI R + ++ +AL+DMYAKCG L+ A +F+ M R+VV
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 510 SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
SW A+ISAY +G G + LF ++ G PDS++F+ ACSH GL+EEG F M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
T YK+ P+ EH A +VD+L R+GK +A + I +M +P+E +W ++L +CR+H + D+
Sbjct: 437 TDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 630 AKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIK 689
AA++LF + + YV +SNI A+AG+WE V ++ M+ +GL K P S VE+
Sbjct: 497 GLLAADKLFQL-APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 690 HKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSE 749
+H F D++HPQ EI ++D+L ++M++ GYVPD+ ALH+ +E+ K L HSE
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSE 615
Query: 750 RLAIAFALISTPE-----GSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHF 804
+LAI FAL++T E + I + KNLR C DCH A K+IS+I REI +RD++RFH F
Sbjct: 616 KLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVF 675
Query: 805 KDGICSC 811
+ G+CSC
Sbjct: 676 RFGVCSC 682
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 224/494 (45%), Gaps = 43/494 (8%)
Query: 48 QIMDL---VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNA 104
Q++D ++T + +R + + + +++ +M Y ++ A+++FD + ERN
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLM-RAYASLKDVASARKVFDEIPERNV 105
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSH 164
+ ++I Y + + E K+F MC +PD+ TF +L C+ I ++H
Sbjct: 106 IIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGS 165
Query: 165 VVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEA 224
K+G S + + N L+ Y K + A + EM +RD V++N+L+ GYA +A
Sbjct: 166 ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA 225
Query: 225 IKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDF 284
+++ EM + T ++L AV T NV
Sbjct: 226 LEVCREMESVKISHDAGTMASLL-----------------PAVSNTTTENVMY------- 261
Query: 285 YSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPF 344
+ +F+KM + VS+N+MI Y + E++ L+ +++ ++
Sbjct: 262 ---------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
++L + L +G+++H +L+ NAL+DMYAKC E+A +F + S
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL 464
R V WTAMISA +G +++ LFS+++ + D F + L A ++ + G+
Sbjct: 373 RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 465 HSYII-RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNG 522
+ + + +VD+ + G +K+A + ++M E N W AL+ A +
Sbjct: 433 FKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHS 492
Query: 523 DGEATL----KLFE 532
D + L KLF+
Sbjct: 493 DTDIGLLAADKLFQ 506
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 8/324 (2%)
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
D++ R +HS+ I+ + L+ YA + A ++F ++ R + MI
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
+ V NG + E +K+F M NV D TF VLKA + +I +G+++H + G S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV 535
+++ G+ LV MY KCG L +A + EM R+VVSWN+L+ YA N + L++ EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 536 LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR-EHYASIVDVLCRSGK 594
+ D+ + + A S+ E + Y M +K+ K + ++ V ++
Sbjct: 234 SVKISHDAGTMASLLPAVSN--TTTENVMYVKDM--FFKMGKKSLVSWNVMIGVYMKNAM 289
Query: 595 FDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVT 651
+A +L + M F+PD + +S+L +C L K+ + +++ +
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 652 MSNILAEAGQWESVGKVKKAMRER 675
+ ++ A+ G E V + M+ R
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSR 373
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 147/364 (40%), Gaps = 71/364 (19%)
Query: 19 KNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTI 74
KN+ P + +R+ GF+P + T LS +++ + + N +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 75 SSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG 134
N +I Y K G L A+++F++M R+ V++T +I Y S + +A LF ++ SG
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
PD + FVT L+ C+ H+ +++ G C L +
Sbjct: 406 LVPDSIAFVTTLAACS-----------HAGLLEEGRS-----------------CFKLMT 437
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
YK P+ + + + G A G KEA + ++D+ E ++ + A+L A
Sbjct: 438 DHYKITPRLEHLACMVDLLGRA--GKVKEAYRF---IQDMSMEPNERVWGALLGACRVHS 492
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
D G L+ A KLF PE G Y ++
Sbjct: 493 DTDIG-------------------------------LLAADKLFQLAPEQSGY-YVLLSN 520
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
YA G +E N+ R + +K ++N P A+ + + + +G + H Q+ +
Sbjct: 521 IYAKAGRWEEVTNI-RNIMKSKGLKKN-PGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 578
Query: 375 EVLV 378
+VLV
Sbjct: 579 DVLV 582
>AT3G49140.1 | Symbols: | EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: EMB2758
(embryo defective 2758) (TAIR:AT4G33990.1); Has 45368
Blast hits to 16108 proteins in 635 species: Archae -
60; Bacteria - 10333; Metazoa - 8211; Fungi - 3499;
Plants - 14806; Viruses - 492; Other Eukaryotes - 7967
(source: NCBI BLink). | chr3:18212187-18217848 REVERSE
Length = 1215
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/667 (36%), Positives = 369/667 (55%), Gaps = 49/667 (7%)
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNS-----LIDSYCKMHCVDLASQLYKEMPQRDSVTYN 209
I+ L VHS ++ + CNS L+ +Y + V A +++ E+P+R+ + N
Sbjct: 55 IRTLRTVHSRIIL-----EDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIIN 109
Query: 210 ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT 269
+I Y N GF E +K+F M +TF VL A I G++IHG A K
Sbjct: 110 VMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLF 329
L +FVGN L+ Y K L EAR + +M D VS+N ++ YA +++ +
Sbjct: 170 GLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVC 229
Query: 330 RKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKC 389
R+++ K A++L +N TT ++ MY K
Sbjct: 230 REMESVKISHDAGTMASLLPAVSN----------------TTTENV---------MYVK- 263
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
+F K+ + V W MI ++N E+++L+S M D D + SVL
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV 509
A + +++SLGK++H YI R + ++ +AL+DMYAKCG L+ A +F+ M R+VV
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 510 SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
SW A+ISAY +G G + LF ++ G PDS++F+ ACSH GL+EEG F M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
T YK+ P+ EH A +VD+L R+GK +A + I +M +P+E +W ++L +CR+H + D+
Sbjct: 437 TDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 630 AKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIK 689
AA++LF + + YV +SNI A+AG+WE V ++ M+ +GL K P S VE+
Sbjct: 497 GLLAADKLFQL-APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 555
Query: 690 HKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSE 749
+H F D++HPQ EI ++D+L ++M++ GYVPD+ ALH+ +E+ K L HSE
Sbjct: 556 RIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSE 615
Query: 750 RLAIAFALISTPE-----GSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHF 804
+LAI FAL++T E + I + KNLR C DCH A K+IS+I REI +RD++RFH F
Sbjct: 616 KLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVF 675
Query: 805 KDGICSC 811
+ G+CSC
Sbjct: 676 RFGVCSC 682
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 208/460 (45%), Gaps = 39/460 (8%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
++ Y ++ A+++FD + ERN + ++I Y + + E K+F MC +PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
+ TF +L C+ I ++H K+G S + + N L+ Y K + A +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
EM +RD V++N+L+ GYA +A+++ EM + T ++L
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLL----------- 248
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
AV T NV + +F+KM + VS+N+MI Y
Sbjct: 249 ------PAVSNTTTENVMY----------------VKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
+ E++ L+ +++ ++ ++L + L +G+++H +L+
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
NAL+DMYAKC E+A +F + SR V WTAMISA +G +++ LFS+++ +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 439 TADQATFASVLKASANLASISLGKQLHSYII-RSGFMSSIYAGSALVDMYAKCGSLKDAI 497
D F + L A ++ + G+ + + + +VD+ + G +K+A
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 498 QIFKEMP-ERNVVSWNALISAYASNGDGEATL----KLFE 532
+ ++M E N W AL+ A + D + L KLF+
Sbjct: 467 RFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 8/270 (2%)
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
D++ R +HS+ I+ + L+ YA + A ++F ++ R + MI
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
+ V NG + E +K+F M NV D TF VLKA + +I +G+++H + G S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV 535
+++ G+ LV MY KCG L +A + EM R+VVSWN+L+ YA N + L++ EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 536 LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR-EHYASIVDVLCRSGK 594
+ D+ + + A S+ E + Y M +K+ K + ++ V ++
Sbjct: 234 SVKISHDAGTMASLLPAVSN--TTTENVMYVKDM--FFKMGKKSLVSWNVMIGVYMKNAM 289
Query: 595 FDKAEKLIAEMP---FDPDEIMWSSILNSC 621
+A +L + M F+PD + +S+L +C
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 171/401 (42%), Gaps = 81/401 (20%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA--------------------- 92
+ G LSEAR + D+M R+ +S N ++ GY + + A
Sbjct: 187 KCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMAS 246
Query: 93 ----------------KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
K++F M +++ V++ ++IG Y K+ +EA +L+ RM G +
Sbjct: 247 LLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFE 306
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
PD V+ ++L C D + ++H ++ + +++ N+LID Y K C++ A +
Sbjct: 307 PDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDV 366
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL----YAGI- 251
++ M RD V++ A+I+ Y G +A+ LF +++D G F L +AG+
Sbjct: 367 FENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 252 ------------------GLDDIAFGQQIHGYAVK---------------TTLIWNVFVG 278
L+ +A + G A K +W +G
Sbjct: 427 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486
Query: 279 NALLDFYSKHDC-LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKY 337
+ +S D L+ A KLF PE G Y ++ YA G +E N+ R + +K
Sbjct: 487 ACRV--HSDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAGRWEEVTNI-RNIMKSKG 542
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
++N P A+ + + + +G + H Q+ + +VLV
Sbjct: 543 LKKN-PGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLV 582
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/590 (38%), Positives = 348/590 (58%), Gaps = 3/590 (0%)
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
+EM LG E + A+L A + + GQ++H + +KT + ++ LL FY K
Sbjct: 40 LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK 99
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
DCL +ARK+ +MPE + VS+ MI+ Y+ TG E++ +F ++ + F FAT+
Sbjct: 100 CDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT 407
L+ L +G+Q+H + DS + V ++L+DMYAK + +EA IF L R
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
V TA+I+ Q G EE+L++F + + ++ + T+AS+L A + LA + GKQ H +
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEAT 527
++R ++L+DMY+KCG+L A ++F MPER +SWNA++ Y+ +G G
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 528 LKLFEEMV-LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK-VYKLVPKREHYASI 585
L+LF M +PD+V+ L V + CSH + + GL F+ M Y P EHY I
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD 645
VD+L R+G+ D+A + I MP P + S+L +CR+H + D+ + +L +E +
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP-EN 458
Query: 646 AAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQM 705
A YV +SN+ A AG+W V V+ M ++ +TK P SW++ + +H F AND+ HP+
Sbjct: 459 AGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRR 518
Query: 706 KEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSP 765
+E++ K+ +S +M++ GYVPD SC L++ DE+ K + L HSE+LA+ F LI+T EG P
Sbjct: 519 EEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIP 578
Query: 766 ILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
I V KNLR C DCH K+ SK+ RE+++RD +RFH DGICSC DYW
Sbjct: 579 IRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 193/383 (50%), Gaps = 3/383 (0%)
Query: 127 FVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
+ M G + + + LL+ C D + ++ +VH+H++K + A + L+ Y K
Sbjct: 40 LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK 99
Query: 187 MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
C++ A ++ EMP+++ V++ A+I+ Y+ G + EA+ +F EM + ++FTF V
Sbjct: 100 CDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATV 159
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
L + I + G+QIHG VK ++FVG++LLD Y+K + EAR++F +PE D
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
VS +I YA GL +E++ +F +L +A++L+ + + L G+Q H
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEES 426
+ ++ N+L+DMY+KC A R+F + R + W AM+ ++G E
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 427 LKLFSEMRRD-NVTADQATFASVLKASANLASISLGKQLHSYIIRS--GFMSSIYAGSAL 483
L+LF MR + V D T +VL ++ G + ++ G +
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 484 VDMYAKCGSLKDAIQIFKEMPER 506
VDM + G + +A + K MP +
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSK 422
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 143/248 (57%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L A+++ D M E+N V++T +I YS++ EA +F M RS KP+ TF T+L+
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C + Q+H +VK +DS + + +SL+D Y K + A ++++ +P+RD V+
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
A+IAGYA G ++EA+++F + G + T+ ++L A GL + G+Q H + ++
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
L + + N+L+D YSK L AR+LF MPE +S+N M+ Y+ GL +E + L
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 329 FRKLQFTK 336
FR ++ K
Sbjct: 343 FRLMRDEK 350
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 92/155 (59%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
++ Y K G++ A+EIF+ + ER+ V+ T +I GY++ EA ++F R+ G P+
Sbjct: 194 LLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPN 253
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
YVT+ +LL+ + ++ Q H HV++ ++ NSLID Y K + A +L+
Sbjct: 254 YVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFD 313
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
MP+R ++++NA++ GY+ G +E ++LF MRD
Sbjct: 314 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD 348
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 50 MDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
+ L+ G+ + L ++P+ + N +I Y K G LS A+ +FD+M ER A+++
Sbjct: 267 LALLDHGKQAHCHVLRRELPFYAVLQ-NSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSG--TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV- 166
++ GYSK E +LF R+ R KPD VT + +LSGC+ +M + +V
Sbjct: 326 MLVGYSKHGLGREVLELF-RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 167 -KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
+ G ++D + +D A + K MP + +
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 258/787 (32%), Positives = 412/787 (52%), Gaps = 93/787 (11%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSI 91
R T P T+ N +I L + G++ EAR+LFD ++ S N M++GY
Sbjct: 9 RTYSTTIPPPTA--NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRD 66
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
A+++FD M +RN +++ L+SG
Sbjct: 67 ARKLFDEMPDRNIISWN-----------------------------------GLVSG--- 88
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNAL 211
M G V L + V+ +L+ Y VD+A L+ +MP+++ V++ +
Sbjct: 89 -YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVM 147
Query: 212 IAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL 271
+ G+ +G +A KL+ + D D+IA IHG
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDK-------------------DNIARTSMIHGLC----- 183
Query: 272 IWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRK 331
K + EAR++F +M E +++ M+T Y + ++ +F
Sbjct: 184 ---------------KEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 332 LQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA-NALVDMYAKCR 390
+ ++ + +ML M +Q GR ++ + + ++A NA++ +
Sbjct: 229 MP----EKTEVSWTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 279
Query: 391 RPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLK 450
+A R+F + R W +I + +NG E+L LF M++ V T S+L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 451 ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS 510
A+LAS+ GKQ+H+ ++R F +Y S L+ MY KCG L + IF P ++++
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 511 WNALISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
WN++IS YAS+G GE LK+F EM L G +P+ V+F+ +ACS+ G+VEEGL+ + SM
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
V+ + P HYA +VD+L R+G+F++A ++I M +PD +W S+L +CR H D+
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 630 AKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIK 689
A+ A++L +E ++ Y+ +SN+ A G+W V +++K M+ R + K P SW E++
Sbjct: 520 AEFCAKKLIEIEP-ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE 578
Query: 690 HKVHIFCANDKN-HPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHS 748
+KVH F N HP+ + I+ +D L + + GY PD S ALH+ DE+ KV SLKYHS
Sbjct: 579 NKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHS 638
Query: 749 ERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGI 808
ERLA+A+AL+ EG PI VMKNLR C+DCH AIK+ISK+ REI +RD++RFHHF++G
Sbjct: 639 ERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGE 698
Query: 809 CSCRDYW 815
CSC+DYW
Sbjct: 699 CSCKDYW 705
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/726 (32%), Positives = 381/726 (52%), Gaps = 71/726 (9%)
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEG 219
Q H+ ++K G + I LI SY +C + A + + +P ++++LI
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
++I +F M G + L G+QIH + + L + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 280 ALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA---------------------- 317
++ Y + + +ARK+F +M + D V+ + ++ AYA
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 318 ----WTGLI---------KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLH 364
W G++ KE++ +F+K+ + +++L + L MGR +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 365 SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKL----SSRC-------------- 406
I + V +A++DMY K +F + + C
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 407 -----------------TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
V WT++I+ QNG E+L+LF EM+ V + T S+L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV 509
A N+A++ G+ H + +R + +++ GSAL+DMYAKCG + + +F MP +N+V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 510 SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
WN+L++ ++ +G + + +FE ++ +PD +SF + +AC GL +EG +YF M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
++ Y + P+ EHY+ +V++L R+GK +A LI EMPF+PD +W ++LNSCR+ N DL
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 630 AKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIK 689
A+ AAE+LF++E + YV +SNI A G W V ++ M GL K P SW+++K
Sbjct: 576 AEIAAEKLFHLEP-ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 690 HKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSE 749
++V+ A DK+HPQ+ +I K+D +S++M K G+ P+ ALH+ +E + + L HSE
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSE 694
Query: 750 RLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGIC 809
+LA+ F L++TP+G+P+ V+KNLR C DCHA IK IS GREI +RD++RFHHFKDGIC
Sbjct: 695 KLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGIC 754
Query: 810 SCRDYW 815
SC D+W
Sbjct: 755 SCGDFW 760
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 184/388 (47%), Gaps = 43/388 (11%)
Query: 5 HRKIP----LKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSE 60
H IP L NL + A+ S V I +G D ++ G++ +
Sbjct: 110 HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 61 ARELFDQMPYRNTISSNVMISGYLKEGKLS----IAKEIFDSMVERNAVTYTLLIGGYSK 116
AR++FD+M ++ ++ + ++ Y ++G L I E+ S +E N V++ ++ G+++
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 117 SDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG--HDSAV 174
S EA +F ++ G PD VT ++L D +M+ +H +V+K G D V
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV 289
Query: 175 I-----------------------------ICNSLIDSYCKMHCVDLASQLYKEMPQR-- 203
I +CN+ I + VD A ++++ ++
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349
Query: 204 --DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
+ V++ ++IAG A G + EA++LF EM+ G + + T ++L A + + G+
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
HG+AV+ L+ NV VG+AL+D Y+K + ++ +F MP + V +N ++ ++ G
Sbjct: 410 THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLS 349
KE +++F L T+ F ++LS
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLS 497
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N + +I Y K G++++++ +F+ M +N V + L+ G+S + E +F +
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 132 RSGTKPDYVTFVTLLSGCNDP-------KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
R+ KPD+++F +LLS C K K + + + +L H S ++ +L+
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMV---NLLGRA 538
Query: 185 CKMHCVDLASQLYKEMP-QRDSVTYNALI 212
K+ A L KEMP + DS + AL+
Sbjct: 539 GKLQ---EAYDLIKEMPFEPDSCVWGALL 564
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/608 (36%), Positives = 346/608 (56%), Gaps = 1/608 (0%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
YN+LI G+ N E + LF+ +R G FTF VL A G +H V
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
K +V +LL YS L +A KLF ++P+ V++ + + Y +G +E+I+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
LF+K+ ++ +LS ++ DL G + V LV++YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 388 KCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFAS 447
KC + E+A +F + + V W+ MI N +E ++LF +M ++N+ DQ +
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 448 VLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERN 507
L + A+L ++ LG+ S I R F+++++ +AL+DMYAKCG++ ++FKEM E++
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFN 567
+V NA IS A NG + + +F + LG PD +FL + C H GL+++GLR+FN
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 568 SMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ 627
+++ VY L EHY +VD+ R+G D A +LI +MP P+ I+W ++L+ CR+ K+
Sbjct: 439 AISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDT 498
Query: 628 DLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVE 687
LA+ ++L +E +A YV +SNI + G+W+ +V+ M ++G+ K+P YSW+E
Sbjct: 499 QLAETVLKELIALEPW-NAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIE 557
Query: 688 IKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYH 747
++ KVH F A+DK+HP +I K++ L +M G+VP T + +E+ K L YH
Sbjct: 558 LEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYH 617
Query: 748 SERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDG 807
SE+LA+A LIST G I V+KNLR C DCH +K+ISKI REI VRD++RFH F +G
Sbjct: 618 SEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNG 677
Query: 808 ICSCRDYW 815
CSC DYW
Sbjct: 678 SCSCNDYW 685
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 205/443 (46%), Gaps = 14/443 (3%)
Query: 103 NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVH 162
N Y LI G+ + F E LF+ + + G TF +L C K +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 163 SHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNK 222
S VVK G + V SL+ Y ++ A +L+ E+P R VT+ AL +GY G ++
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALL 282
EAI LF +M ++G + + VL A + + D+ G+ I Y + + N FV L+
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 283 DFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNF 342
+ Y+K + +AR +F M E D V+++ MI YA KE I LF ++ F
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQF 314
Query: 343 PFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKL 402
LS A++ L +G S + + +ANAL+DMYAKC +F ++
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 403 SSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGK 462
+ V A IS +NGH + S +F + + ++ D +TF +L + I G
Sbjct: 375 KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGL 434
Query: 463 QLHSYIIRSGFMSSIYA-------GSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNAL 514
+ + I S +YA +VD++ + G L DA ++ +MP R N + W AL
Sbjct: 435 RFFNAI------SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Query: 515 ISAYASNGDGEATLKLFEEMVLL 537
+S D + + +E++ L
Sbjct: 489 LSGCRLVKDTQLAETVLKELIAL 511
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/679 (35%), Positives = 367/679 (54%), Gaps = 66/679 (9%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYC---KMHCVDL--ASQLYKE 199
L N+ + I+ L Q+H+ +K G + ++ +C +H DL A +++ +
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEIL-RFCATSDLHHRDLDYAHKIFNQ 84
Query: 200 MPQRDSVTYNALIAGYANEGFNKE--AIKLFMEMRDLGF-ETSDFTFQAVLYAGIGLDDI 256
MPQR+ ++N +I G++ +K AI LF EM F E + FTF +VL A I
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKI 144
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G+QIHG A+K + FV + L+ Y + +AR LFYK
Sbjct: 145 QEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYK---------------- 188
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
N+ K DRR D E+
Sbjct: 189 ----------NIIEKDMVVMTDRRK------------------------------RDGEI 208
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
++ N ++D Y + + A +F K+ R V W MIS NG F++++++F EM++
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
++ + T SVL A + L S+ LG+ LH Y SG GSAL+DMY+KCG ++ A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
I +F+ +P NV++W+A+I+ +A +G + F +M G +P V+++ + TACSH
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
GLVEEG RYF+ M V L P+ EHY +VD+L RSG D+AE+ I MP PD+++W +
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+L +CR+ N ++ KR A L +M V D+ YV +SN+ A G W V +++ M+E+
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDM-VPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 677 LTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNED 736
+ K P S ++I +H F D +HP+ KEI + +S+++ GY P T+ L N +
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 567
Query: 737 EDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVR 796
E+ K L YHSE++A AF LIST G PI ++KNLR C DCH++IK+ISK+ R+ITVR
Sbjct: 568 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 627
Query: 797 DSSRFHHFKDGICSCRDYW 815
D RFHHF+DG CSC DYW
Sbjct: 628 DRKRFHHFQDGSCSCMDYW 646
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 194/410 (47%), Gaps = 20/410 (4%)
Query: 58 LSEARELFDQMPYRNTISSNVMISGYLK--EGKLSIAKEIF-----DSMVERNAVTYTLL 110
L A ++F+QMP RN S N +I G+ + E K IA +F D VE N T+ +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 111 IGGYSKSDQFIEAFKLFVRMCRSGTKPDYV---TFVTLLSGCNDPKMIKGLFQ---VHSH 164
+ +K+ + E ++ + G D V + C K + LF +
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 165 VV----KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
+V + D +++ N +ID Y ++ A L+ +M QR V++N +I+GY+ GF
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 221 NKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
K+A+++F EM+ + T +VL A L + G+ +H YA + + + +G+A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
L+D YSK + +A +F ++P + ++++ MI +A G ++I+ F K++
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 341 NFPFATMLSLAANMLDLQMGRQLHSQAI-VTTADSEVLVANALVDMYAKCRRPEEAERIF 399
+ + +L+ ++ ++ GR+ SQ + V + + +VD+ + +EAE
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 400 VKLSSRC-TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASV 448
+ + + V W A++ A G+ E K + + D V D + ++
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMG-KRVANILMDMVPHDSGAYVAL 483
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/712 (34%), Positives = 395/712 (55%), Gaps = 46/712 (6%)
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLG-----HDSAVIICNSLIDSYCKMHCVDLASQLY 197
++L+ C + +K Q H H+++ G + ++ + + + S+ + + A +++
Sbjct: 34 ISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASL---EYARKVF 87
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDDI 256
E+P+ +S +N LI YA+ +I F++M + + +TF ++ A + +
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
+ GQ +HG AVK+ + +VFV N+L+ Y L A K+F + E D VS+N MI +
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
G +++ LF+K++ + +LS A + +L+ GRQ+ S + +
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWT------------------------- 411
+ANA++DMY KC E+A+R+F + + V WT
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 412 ------AMISANVQNGHFEESLKLFSEMR-RDNVTADQATFASVLKASANLASISLGKQL 464
A+ISA QNG E+L +F E++ + N+ +Q T S L A A + ++ LG+ +
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 465 HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDG 524
HSYI + G + + SAL+ MY+KCG L+ + ++F + +R+V W+A+I A +G G
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
+ +F +M +P+ V+F VF ACSH GLV+E F+ M Y +VP+ +HYA
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 585 IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLR 644
IVDVL RSG +KA K I MP P +W ++L +C+IH N +LA+ A +L +E
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 645 DAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQ 704
D A +V +SNI A+ G+WE+V +++K MR GL K P S +EI +H F + D HP
Sbjct: 568 DGA-HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 626
Query: 705 MKEIILKIDILSEQMEKEGYVPDTSCALH-NEDEDIKVESLKYHSERLAIAFALISTPEG 763
+++ K+ + E+++ GY P+ S L E+E++K +SL HSE+LAI + LIST
Sbjct: 627 SEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAP 686
Query: 764 SPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
I V+KNLR C DCH+ K+IS++ REI VRD RFHHF++G CSC D+W
Sbjct: 687 KVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 212/464 (45%), Gaps = 35/464 (7%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGY-SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
L A+++FD + + N+ + LI Y S D + + + S P+ TF L+
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
+ + +H VK S V + NSLI Y +D A +++ + ++D V+
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+N++I G+ +G +A++LF +M + S T VL A + ++ FG+Q+ Y
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLF----------------------------- 298
+ + N+ + NA+LD Y+K + +A++LF
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 299 --YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAANML 355
MP+ D V++N +I+AY G E++ +F +LQ K + N + LS A +
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
L++GR +HS V +AL+ MY+KC E++ +F + R W+AMI
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL-HSYIIRSGFM 474
+G E++ +F +M+ NV + TF +V A ++ + + L H G +
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS-WNALISA 517
+ +VD+ + G L+ A++ + MP S W AL+ A
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/551 (21%), Positives = 219/551 (39%), Gaps = 67/551 (12%)
Query: 17 AAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISS 76
AA+ S ++ + VK+ +N I G L A ++F + ++ +S
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N MI+G++++G A E+F M + + + G + I + ++C +
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+TL + D G + + + + +++D Y + A ++
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR-DLGFETSDFTFQAVLYAGIGLDD 255
MPQ+D V +NALI+ Y G EA+ +F E++ + + T + L A +
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G+ IH Y K + N V +AL+ YSK L ++R++F + + D ++ MI
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
A G E++++F K+Q F + ++
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH---------------------- 478
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSR-CTVP----WTAMISANVQNGHFEESLKLF 430
LVD EAE +F ++ S VP + ++ ++G+ E+++K
Sbjct: 479 ----TGLVD---------EAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 431 SEMRRDNVTADQATF--ASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYA 488
M T+ A + A+ NLA ++ + L G A L ++YA
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG------AHVLLSNIYA 579
Query: 489 KCGSLKDAIQIFKEM--------PERNVVSWNALISAYASNGDGEATL------KLFEEM 534
K G ++ ++ K M P + + + +I + S GD + KL E M
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS-GDNAHPMSEKVYGKLHEVM 638
Query: 535 VLL---GYQPD 542
L GY+P+
Sbjct: 639 EKLKSNGYEPE 649
>AT5G46460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18840305-18842398 FORWARD
Length = 697
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/638 (35%), Positives = 373/638 (58%), Gaps = 14/638 (2%)
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
+I Y + + + A L+ EMP RD V++N++I+G G A+KLF EM E S
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP----ERS 127
Query: 240 DFTFQAVLYAGIGLDDIAFGQQI-HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLF 298
++ A++ + +++ + VK T WN V + L F D L KLF
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMV-HGYLQFGKVDDAL----KLF 182
Query: 299 YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
+MP + +S+ MI E+++LF+ + + PF +++ AN
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFH 242
Query: 359 MGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANV 418
MG Q+H I E V+ +L+ YA C+R ++ ++F + WTA++S
Sbjct: 243 MGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIY 478
N E++L +FS M R+++ +Q+TFAS L + + L ++ GK++H ++ G + +
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362
Query: 479 AGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG 538
G++LV MY+ G++ DA+ +F ++ ++++VSWN++I A +G G+ +F +M+ L
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 539 YQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR-EHYASIVDVLCRSGKFDK 597
+PD ++F + +ACSH G +E+G + F M+ + ++ +HY +VD+L R GK +
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 598 AEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILA 657
AE+LI M P+E++W ++L++CR+H + D ++AA +FN++ + +A YV +SNI A
Sbjct: 483 AEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS-KSSAAYVLLSNIYA 541
Query: 658 EAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSE 717
AG+W +V K++ M++ G+ K P SWV I+ K H F + D+ P I K++ L E
Sbjct: 542 SAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLRE 599
Query: 718 QMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTD 777
++++ GY PD ALH+ +++ K E L YHSERLAIAF LI+T EGS + VMKNLR C D
Sbjct: 600 KLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCED 659
Query: 778 CHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
CH IK+IS +VGREI +RD RFHHFK+G CSC DYW
Sbjct: 660 CHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 234/488 (47%), Gaps = 44/488 (9%)
Query: 40 PSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM 99
P S I ++ +L +A LFD+MP R+ +S N MISG ++ G ++ A ++FD M
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 100 VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF 159
ER+ V++T ++ G +S + +A +LF +M P
Sbjct: 124 PERSVVSWTAMVNGCFRSGKVDQAERLFYQM------P---------------------- 155
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEG 219
VK D+A NS++ Y + VD A +L+K+MP ++ +++ +I G
Sbjct: 156 ------VK---DTAAW--NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNE 204
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
+ EA+ LF M +++ F V+ A G Q+HG +K ++ +V
Sbjct: 205 RSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSA 264
Query: 280 ALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR 339
+L+ FY+ + ++RK+F + + +++ Y+ ++++++F +
Sbjct: 265 SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP 324
Query: 340 RNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF 399
FA+ L+ + + L G+++H A+ +++ V N+LV MY+ +A +F
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 400 VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
+K+ + V W ++I Q+G + + +F +M R N D+ TF +L A ++ +
Sbjct: 385 IKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLE 444
Query: 460 LGKQLHSYIIRSGFM---SSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALI 515
G++L Y + SG I + +VD+ +CG LK+A ++ + M + N + W AL+
Sbjct: 445 KGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Query: 516 SAYASNGD 523
SA + D
Sbjct: 504 SACRMHSD 511
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 195/397 (49%), Gaps = 9/397 (2%)
Query: 28 CIDARIVKTGFDPSTSRSNYQIMDLV----QTGQLSEARELFDQMPYRNTISSNVMISGY 83
C D FD RS +V ++G++ +A LF QMP ++T + N M+ GY
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGY 169
Query: 84 LKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
L+ GK+ A ++F M +N +++T +I G ++++ EA LF M R K F
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 144 TLLSGC-NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
+++ C N P G+ QVH ++KLG + SLI Y + + +++ E
Sbjct: 230 CVITACANAPAFHMGI-QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
+ AL++GY+ +++A+ +F M + TF + L + L + +G+++
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
HG AVK L + FVGN+L+ YS + +A +F K+ + VS+N +I A G
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL--HSQAIVTTADSEVLVAN 380
K + +F ++ + F +LS ++ L+ GR+L + + + D ++
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT 468
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCT-VPWTAMISA 416
+VD+ +C + +EAE + ++ + + W A++SA
Sbjct: 469 CMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 44/322 (13%)
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
V + EVL+ N L+ RR +EA +F ++ S +T MI+ ++ ++L
Sbjct: 33 VEFQNREVLICNHLLS-----RRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALN 87
Query: 429 LFSEMR-RDNVTADQATFASVLKASANLA----------SISLGKQLHSYIIRSGFMSS- 476
LF EM RD V+ + V N A S+ + + RSG +
Sbjct: 88 LFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQA 147
Query: 477 -----------IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
A +++V Y + G + DA+++FK+MP +NV+SW +I N
Sbjct: 148 ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACS-----HWGLVEEGLRYFNSMTKVYKLVPKRE 580
L LF+ M+ + S F CV TAC+ H G+ GL + KL E
Sbjct: 208 EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL--------IIKLGFLYE 259
Query: 581 HY--ASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLF 638
Y AS++ + + K+ E + + W+++L+ ++K + A +
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV-WTALLSGYSLNKKHEDALSIFSGML 318
Query: 639 NMEVLRDAAPYVTMSNILAEAG 660
+L + + + + N + G
Sbjct: 319 RNSILPNQSTFASGLNSCSALG 340
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/553 (39%), Positives = 335/553 (60%), Gaps = 1/553 (0%)
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
HG ++ L +V + N L++ YSK + AR++F M E VS+N MI Y +
Sbjct: 76 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 135
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
E++++F +++ + F +++LS D ++LH ++ T D + V AL
Sbjct: 136 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 195
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
+D+YAKC ++A ++F + + +V W++M++ VQN ++EE+L L+ +R ++ +Q
Sbjct: 196 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 255
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
T +SV+ A +NLA++ GKQ+H+ I +SGF S+++ S+ VDMYAKCGSL+++ IF E
Sbjct: 256 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 315
Query: 503 MPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG 562
+ E+N+ WN +IS +A + + + LFE+M G P+ V+F + + C H GLVEEG
Sbjct: 316 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 375
Query: 563 LRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCR 622
R+F M Y L P HY+ +VD+L R+G +A +LI +PFDP +W S+L SCR
Sbjct: 376 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCR 435
Query: 623 IHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPA 682
++KN +LA+ AAE+LF +E +A +V +SNI A QWE + K +K +R+ + KV
Sbjct: 436 VYKNLELAEVAAEKLFELEP-ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRG 494
Query: 683 YSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVE 742
SW++IK KVH F + HP+++EI +D L + K GY P LH+ + K E
Sbjct: 495 KSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEE 554
Query: 743 SLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFH 802
L HSE+LA+ F L+ PE SP+ +MKNLR C DCH +K S R I VRD +RFH
Sbjct: 555 LLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFH 614
Query: 803 HFKDGICSCRDYW 815
HF DG CSC D+W
Sbjct: 615 HFSDGHCSCGDFW 627
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 197/359 (54%), Gaps = 4/359 (1%)
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFN 221
H ++++ + V + N LI++Y K V+LA Q++ M +R V++N +I Y
Sbjct: 76 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 135
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYA-GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
EA+ +F+EMR+ GF+ S+FT +VL A G+ D + +++H +VKT + N++VG A
Sbjct: 136 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTA 194
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
LLD Y+K + +A ++F M + V+++ M+ Y +E++ L+R+ Q ++
Sbjct: 195 LLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQN 254
Query: 341 NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
F ++++ +N+ L G+Q+H+ + S V VA++ VDMYAKC E+ IF
Sbjct: 255 QFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFS 314
Query: 401 KLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISL 460
++ + W +IS ++ +E + LF +M++D + ++ TF+S+L + +
Sbjct: 315 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 374
Query: 461 GKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS-WNALISA 517
G++ + + G ++ S +VD+ + G L +A ++ K +P S W +L+++
Sbjct: 375 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 433
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 151/287 (52%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
NV+I+ Y K G + +A+++FD M+ER+ V++ +IG Y+++ EA +F+ M G K
Sbjct: 92 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 151
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
T ++LS C ++H VK D + + +L+D Y K + A Q+
Sbjct: 152 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 211
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
++ M + SVT+++++AGY +EA+ L+ + + E + FT +V+ A L +
Sbjct: 212 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 271
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G+Q+H K+ NVFV ++ +D Y+K L E+ +F ++ E + +N +I+ +
Sbjct: 272 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGF 331
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
A KE + LF K+Q F+++LS+ + ++ GR+
Sbjct: 332 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 378
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 1/228 (0%)
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
++ RN +L L A + + H + I + +V + N L++ Y+KC E
Sbjct: 48 NEFSNRNL-VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 106
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASAN 454
A ++F + R V W MI +N E+L +F EMR + + T +SVL A
Sbjct: 107 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 166
Query: 455 LASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNAL 514
K+LH +++ ++Y G+AL+D+YAKCG +KDA+Q+F+ M +++ V+W+++
Sbjct: 167 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 226
Query: 515 ISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG 562
++ Y N + E L L+ + + + + V ACS+ + EG
Sbjct: 227 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 274
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 119/234 (50%), Gaps = 5/234 (2%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N ++ Y K G + A ++F+SM ++++VT++ ++ GY ++ + EA L+ R
Sbjct: 188 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 247
Query: 132 RSGTKPDYVTFVTLLSGC-NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
R + + T +++ C N +I+G Q+H+ + K G S V + +S +D Y K +
Sbjct: 248 RMSLEQNQFTLSSVICACSNLAALIEGK-QMHAVICKSGFGSNVFVASSAVDMYAKCGSL 306
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG 250
+ ++ E+ +++ +N +I+G+A KE + LF +M+ G ++ TF ++L
Sbjct: 307 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 366
Query: 251 IGLDDIAFGQQIHGYAVKTT--LIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ G++ ++TT L NV + ++D + L EA +L +P
Sbjct: 367 GHTGLVEEGRRFFKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 419
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
R N +++ +L+ A ++ K H IIR + + L++ Y+KCG +
Sbjct: 45 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 104
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+ A Q+F M ER++VSWN +I Y N L +F EM G++ + V +AC
Sbjct: 105 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 164
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHY--ASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
G+ + L K Y +++D+ + G A ++ M D
Sbjct: 165 ---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSS 220
Query: 612 IMWSSILNSCRIHKNQDLA 630
+ WSS++ +KN + A
Sbjct: 221 VTWSSMVAGYVQNKNYEEA 239
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/655 (33%), Positives = 380/655 (58%), Gaps = 11/655 (1%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
R+ ++I YLK+G + A+ +FD++ E++ VT+T +I G K + + +LF ++
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
PD T+LS C+ ++G Q+H+H+++ G + + N LIDSY K V
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG 250
A +L+ MP ++ +++ L++GY +KEA++LF M G + + ++L +
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 251 IGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYN 310
L + FG Q+H Y +K L + +V N+L+D Y+K DCL +ARK+F D V +N
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 311 MMITAYAWTGL---IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
MI Y+ G + E++N+FR ++F F ++L +A++ L + +Q+H
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESL 427
+ ++ +AL+D+Y+ C +++ +F ++ + V W +M + VQ EE+L
Sbjct: 481 FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEAL 540
Query: 428 KLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMY 487
LF E++ D+ TFA+++ A+ NLAS+ LG++ H +++ G + Y +AL+DMY
Sbjct: 541 NLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600
Query: 488 AKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
AKCGS +DA + F R+VV WN++IS+YA++G+G+ L++ E+M+ G +P+ ++F+
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFV 660
Query: 548 CVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPF 607
V +ACSH GLVE+GL+ F M + + + P+ EHY +V +L R+G+ +KA +LI +MP
Sbjct: 661 GVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT 719
Query: 608 DPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVL---RDAAPYVTMSNILAEAGQWES 664
P I+W S+L+ C N +LA+ AAE M +L +D+ + +SNI A G W
Sbjct: 720 KPAAIVWRSLLSGCAKAGNVELAEHAAE----MAILSDPKDSGSFTMLSNIYASKGMWTE 775
Query: 665 VGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQM 719
KV++ M+ G+ K P SW+ I +VHIF + DK+H + +I +D L Q+
Sbjct: 776 AKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/596 (27%), Positives = 299/596 (50%), Gaps = 19/596 (3%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+T SN++I+ Y + G + A+++F+ M ERN V+++ ++ + + E+ +F+
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 132 RS-GTKPDYVTFVTLLSGCN--DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMH 188
R+ P+ + + C+ D + +FQ+ S +VK G D V + LID Y K
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 189 CVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
+D A ++ +P++ +VT+ +I+G G + +++LF ++ + + VL
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
A L + G+QIH + ++ L + + N L+D Y K ++ A KLF MP + +S
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
+ +++ Y L KE++ LF + + +++L+ A++ L G Q+H+ I
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNG---HFEE 425
++ V N+L+DMYAKC +A ++F ++ V + AMI + G E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 426 SLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVD 485
+L +F +MR + TF S+L+ASA+L S+ L KQ+H + + G I+AGSAL+D
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 486 MYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
+Y+ C LKD+ +F EM +++V WN++ + Y + E L LF E+ L +PD +
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 546 FLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
F + TA + V+ G + + K L +++D+ + G + A K
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYAKCGSPEDAHK----- 611
Query: 606 PFDP----DEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILA 657
FD D + W+S+++S + N K+A + L M Y+T +L+
Sbjct: 612 AFDSAASRDVVCWNSVISS---YANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 255/521 (48%), Gaps = 31/521 (5%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
VH ++ G + + N LI+ Y + + A +++++MP+R+ V+++ +++ + G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 221 NKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDD----IAFGQQIHGYAVKTTLIWNV 275
+E++ +F+E R +++ + + A GLD + F Q+ + VK+ +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDV 183
Query: 276 FVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFT 335
+VG L+DFY K + AR +F +PE V++ MI+ G S+ LF +L
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 336 KYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEA 395
+ +T+LS + + L+ G+Q+H+ + + + + N L+D Y KC R A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 396 ERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
++F + ++ + WT ++S QN +E+++LF+ M + + D +S+L + A+L
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 456 ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALI 515
++ G Q+H+Y I++ + Y ++L+DMYAKC L DA ++F +VV +NA+I
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 516 SAYASNG---DGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
Y+ G + L +F +M +P ++F+ + A + L GL ++
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA--SLTSLGLS-----KQI 476
Query: 573 YKLVPKREHYASIVDVLCRSGKFD--------KAEKLIAEMPFDPDEIMWSSILNSCRIH 624
+ L+ K Y +D+ S D K +L+ + D ++W+S+ +
Sbjct: 477 HGLMFK---YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG---Y 530
Query: 625 KNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV 665
Q + A +++ R+ T +N++ AG SV
Sbjct: 531 VQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 162/306 (52%), Gaps = 6/306 (1%)
Query: 254 DDIAFGQQI-HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
DD+ Q + HG + L + ++ N L++ YS+ +V ARK+F KMPE + VS++ M
Sbjct: 57 DDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTM 116
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR----QLHSQAI 368
++A G+ +ES+ +F + T+ D N + A + LD + GR QL S +
Sbjct: 117 VSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR-GRWMVFQLQSFLV 175
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
+ D +V V L+D Y K + A +F L + TV WT MIS V+ G SL+
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 429 LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYA 488
LF ++ DNV D ++VL A + L + GKQ+H++I+R G + L+D Y
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295
Query: 489 KCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLC 548
KCG + A ++F MP +N++SW L+S Y N + ++LF M G +PD +
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSS 355
Query: 549 VFTACS 554
+ T+C+
Sbjct: 356 ILTSCA 361
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 8/326 (2%)
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
FA +L L A+ L +H Q IV + + ++N L+++Y++ A ++F K+
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV-TADQATFASVLKASANLASIS--L 460
R V W+ M+SA +G +EESL +F E R + ++ +S ++A + L +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 461 GKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYAS 520
QL S++++SGF +Y G+ L+D Y K G++ A +F +PE++ V+W +IS
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 521 NGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
G +L+LF +++ PD V +ACS +E G + + + Y L
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDAS 285
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
++D + G+ A KL MP + + I W+++L+ +K L K A E +M
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTTLLSG---YKQNALHKEAMELFTSM 341
Query: 641 EVLRDAAPYVTMSNILAEAGQWESVG 666
S+IL ++G
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALG 367
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 173/399 (43%), Gaps = 29/399 (7%)
Query: 27 TCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKE 86
T + A +K + +N I + L++AR++FD + + N MI GY +
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
G + EA +F M +P +TFV+LL
Sbjct: 430 G----------------------------TQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
+ Q+H + K G + + ++LID Y +C+ + ++ EM +D V
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
+N++ AGY + N+EA+ LF+E++ +FTF ++ A L + GQ+ H
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
+K L N ++ NALLD Y+K +A K F D V +N +I++YA G K+++
Sbjct: 582 LKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKAL 641
Query: 327 NLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
+ K+ + F +LS ++ ++ G + + + E +V +
Sbjct: 642 QMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL 701
Query: 387 AKCRRPEEAERIFVKLSSR-CTVPWTAMISANVQNGHFE 424
+ R +A + K+ ++ + W +++S + G+ E
Sbjct: 702 GRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVE 740
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 18/212 (8%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSI 91
+++K G + + +N + + G +A + FD R+ + N +IS Y G+
Sbjct: 580 QLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKK 639
Query: 92 AKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD---YVTFVT 144
A ++ + M +E N +T+ ++ S + + K F M R G +P+ YV V+
Sbjct: 640 ALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVS 699
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP--- 201
LL + L + K+ A I+ SL+ K V+LA EM
Sbjct: 700 LLGRAGRLNKARELIE------KMPTKPAAIVWRSLLSGCAKAGNVELAEHA-AEMAILS 752
Query: 202 -QRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
+DS ++ L YA++G EA K+ M+
Sbjct: 753 DPKDSGSFTMLSNIYASKGMWTEAKKVRERMK 784
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/614 (36%), Positives = 351/614 (57%), Gaps = 11/614 (1%)
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
S +N + A + E+I L+ M G F+F +L + L GQQ+H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELD--GVSYNMMITAYAWTGLI 322
+ K FV AL+ Y K + +ARK+F + P+ V YN +I+ Y +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
++ +FR+++ T + ++ L L +GR LH Q + DSEV V N+
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
+ MY KC E R+F ++ + + W A+IS QNG + L+L+ +M+ V D
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
T SVL + A+L + +G ++ + +GF+ +++ +A + MYA+CG+L A +F
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 503 MPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG 562
MP +++VSW A+I Y +G GE L LF++M+ G +PD F+ V +ACSH GL ++G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 563 LRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCR 622
L F +M + YKL P EHY+ +VD+L R+G+ D+A + I MP +PD +W ++L +C+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 623 IHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPA 682
IHKN D+A+ A ++ E + YV MSNI +++ E + +++ MRER K P
Sbjct: 438 IHKNVDMAELAFAKVIEFEP-NNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496
Query: 683 YSWVEIKHKVHIFCANDKNHPQMKEIILKIDIL-SEQMEKEGYVPDTSCALHNEDEDIKV 741
YS+VE K +VH+F A D++H Q +E+ +D L + ME G + C + E++
Sbjct: 497 YSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG---NMDC---DRGEEVS- 549
Query: 742 ESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRF 801
+ + HSERLAIAF ++++ G+ ILV+KNLR C DCH +K +SKIV R+ VRD+SRF
Sbjct: 550 STTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 802 HHFKDGICSCRDYW 815
H+FKDG+CSC+DYW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 193/409 (47%), Gaps = 18/409 (4%)
Query: 120 FIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNS 179
F E+ L+ M RSG+ PD +F +L C + Q+H HV K G ++ + +
Sbjct: 34 FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA 93
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRD--SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
LI YCK V A ++++E PQ SV YNALI+GY +A +F M++ G
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
T ++ + + G+ +HG VK L V V N+ + Y K + R+L
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS----LAAN 353
F +MP +++N +I+ Y+ GL + + L+ +++ + F ++LS L A
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
+ ++G+ + S V V V+NA + MYA+C +A +F + + V WTAM
Sbjct: 274 KIGHEVGKLVESNGFVPN----VFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
I +G E L LF +M + + D A F VL A ++ G +L + R
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE-- 387
Query: 474 MSSIYAG----SALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
+ G S LVD+ + G L +A++ + MP E + W AL+ A
Sbjct: 388 -YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 2/253 (0%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERN--AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
+IS Y K G ++ A+++F+ + + +V Y LI GY+ + + +A +F RM +G
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
D VT + L+ C P+ + +H VK G DS V + NS I Y K V+ +L
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRL 213
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+ EMP + +T+NA+I+GY+ G + ++L+ +M+ G FT +VL + L
Sbjct: 214 FDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAK 273
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G ++ + NVFV NA + Y++ L +AR +F MP VS+ MI Y
Sbjct: 274 KIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY 333
Query: 317 AWTGLIKESINLF 329
G+ + + LF
Sbjct: 334 GMHGMGEIGLMLF 346
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N I+ Y+K G + + +FD M + +T+ +I GYS++ + +L+ +M SG
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
PD T V++LS C K +V V G V + N+ I Y + + A +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+ MP + V++ A+I Y G + + LF +M G F VL A
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSA 367
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N SN IS Y + G L+ A+ +FD M ++ V++T +IG Y LF M
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMI-KG--LFQVHSHVVKLGHDSAVIICNSLIDSYCKMH 188
+ G +PD FV +LS C+ + KG LF+ KL C L+D +
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC--LVDLLGRAG 408
Query: 189 CVDLASQLYKEMP-QRDSVTYNALIA 213
+D A + + MP + D + AL+
Sbjct: 409 RLDEAMEFIESMPVEPDGAVWGALLG 434
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/745 (33%), Positives = 390/745 (52%), Gaps = 73/745 (9%)
Query: 80 ISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDY 139
IS + GK++ A++ FDS+ + ++ ++ GY + EA +LF M ++ +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM----SERNV 79
Query: 140 VTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE 199
V++ L+SG +MI +V +L + V+ +++ Y + V A L+
Sbjct: 80 VSWNGLVSGYIKNRMI----VEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 200 MPQRDSVTYNALIAGYANEGFNKEAIKLF--MEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
MP+R+ V++ + G ++G +A KL+ M ++D+ + ++
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----------------VASTNMI 179
Query: 258 FGQQIHGYAVKTTLIW------NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
G G + LI+ NV ++ Y +++ + ARKLF MPE VS+
Sbjct: 180 GGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTS 239
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
M+ Y +G I+++ F +
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPM------------------------------------- 262
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
V+ NA++ + + +A R+F + R W MI A + G E+L LF+
Sbjct: 263 --KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFA 320
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+M++ V + S+L A LAS+ G+Q+H++++R F +Y S L+ MY KCG
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
L A +F ++++ WN++IS YAS+G GE LK+F EM G P+ V+ + + T
Sbjct: 381 ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
ACS+ G +EEGL F SM + + P EHY+ VD+L R+G+ DKA +LI M PD
Sbjct: 441 ACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDA 500
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKA 671
+W ++L +C+ H DLA+ AA++LF E +A YV +S+I A +W V V+K
Sbjct: 501 TVWGALLGACKTHSRLDLAEVAAKKLFENEP-DNAGTYVLLSSINASRSKWGDVAVVRKN 559
Query: 672 MRERGLTKVPAYSWVEIKHKVHIFCAND-KNHPQMKEIILKIDILSEQMEKEGYVPDTSC 730
MR ++K P SW+E+ KVH+F KNHP+ I++ ++ + + GY PD S
Sbjct: 560 MRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSH 619
Query: 731 ALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVG 790
LH+ DE+ KV+SL HSERLA+A+ L+ PEG PI VMKNLR C DCHAAIK+ISK+
Sbjct: 620 VLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTE 679
Query: 791 REITVRDSSRFHHFKDGICSCRDYW 815
REI +RD++RFHHF +G CSCRDYW
Sbjct: 680 REIILRDANRFHHFNNGECSCRDYW 704
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 166/638 (26%), Positives = 298/638 (46%), Gaps = 74/638 (11%)
Query: 55 TGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGY 114
G EAR+LFD+M RN +S N ++SGY+K + A+ +F+ M ERN V++T ++ GY
Sbjct: 61 NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120
Query: 115 SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHV-VKLGHDSA 173
+ EA LF RM + + V++ + G D I +++ + VK
Sbjct: 121 MQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK-----D 171
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
V+ ++I C+ VD A ++ EM +R+ VT+ +I GY A KLF M
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP- 230
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
E ++ ++ ++L I ++ + + V NA++ + + + +
Sbjct: 231 ---EKTEVSWTSMLLGYTLSGRIEDAEEF----FEVMPMKPVIACNAMIVGFGEVGEISK 283
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFP-FATMLSLAA 352
AR++F M + D ++ MI AY G E+++LF ++Q + R +FP ++LS+ A
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQ-KQGVRPSFPSLISILSVCA 342
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ LQ GRQ+H+ + D +V VA+ L+ MY KC +A+ +F + SS+ + W +
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
+IS +G EE+LK+F EM ++ T ++L A + + G ++ + S
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES-MESK 461
Query: 473 F--MSSIYAGSALVDMYAKCGSLKDAIQIFKEM---PERNVVSWNALISAYASNGDGE-- 525
F ++ S VDM + G + A+++ + M P+ V W AL+ A ++ +
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV--WGALLGACKTHSRLDLA 519
Query: 526 --ATLKLFEEMVLLGYQPDSVSFLCVFTAC----SHWG---LVEEGLRYFNSMTKV---- 572
A KLFE +PD+ + ++ S WG +V + +R N+++K
Sbjct: 520 EVAAKKLFEN------EPDNAGTYVLLSSINASRSKWGDVAVVRKNMRT-NNVSKFPGCS 572
Query: 573 YKLVPKREHYASIVDVLCRSG------------KFDKAEKLIAEMPFDPDEIMWSSILNS 620
+ V K+ H + R G +K + L+ E + PD S +L+
Sbjct: 573 WIEVGKKVH------MFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPD---CSHVLHD 623
Query: 621 CRIHKNQDLAKRAAEQL---FNMEVLRDAAPYVTMSNI 655
+ D R +E+L + + L + P M N+
Sbjct: 624 VDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNL 661
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 160/295 (54%), Gaps = 10/295 (3%)
Query: 40 PSTSRSNYQIM--DLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFD 97
P + ++ +M L+ G++ +AR+L+D MP ++ ++S MI G +EG++ A+ IFD
Sbjct: 137 PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFD 196
Query: 98 SMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKG 157
M ERN VT+T +I GY ++++ A KLF M + V++ ++L G + G
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGYT----LSG 248
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYAN 217
+ ++ VI CN++I + ++ + A +++ M RD+ T+ +I Y
Sbjct: 249 RIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYER 308
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
+GF EA+ LF +M+ G S + ++L L + +G+Q+H + V+ +V+V
Sbjct: 309 KGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYV 368
Query: 278 GNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
+ L+ Y K LV+A+ +F + D + +N +I+ YA GL +E++ +F ++
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 191/454 (42%), Gaps = 59/454 (12%)
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
S + C+ I ++ ++ A + + + + ++N++++GY + G KEA +LF EM
Sbjct: 15 STGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM 74
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL 291
+ NV N L+ Y K+ +
Sbjct: 75 SER---------------------------------------NVVSWNGLVSGYIKNRMI 95
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
VEAR +F MPE + VS+ M+ Y G++ E+ +LF ++ +R + M
Sbjct: 96 VEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGL 151
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWT 411
+ + R+L+ V +V+ + ++ + R +EA IF ++ R V WT
Sbjct: 152 IDDGRIDKARKLYDMMPV----KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
MI+ QN + + KLF M + ++ S+L I ++ +
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVMP-- 261
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
M + A +A++ + + G + A ++F M +R+ +W +I AY G L LF
Sbjct: 262 --MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLF 319
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVL-C 590
+M G +P S + + + C+ ++ G + + + + AS++ +
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ--FDDDVYVASVLMTMYV 377
Query: 591 RSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
+ G+ KA KL+ + D IMW+SI++ H
Sbjct: 378 KCGELVKA-KLVFDRFSSKDIIMWNSIISGYASH 410
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 468 IIRSGFMSSIYAGSAL-VDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
I+R +++S + + ++ G + +A + F + + + SWN+++S Y SNG +
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE--HYAS 584
+LF+EM + + VS+ + + G ++ R V++L+P+R + +
Sbjct: 67 ARQLFDEM----SERNVVSWNGLVS-----GYIKN--RMIVEARNVFELMPERNVVSWTA 115
Query: 585 IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWS----SILNSCRIHKNQDLAKRAAEQLFNM 640
+V + G +AE L MP + +E+ W+ +++ RI K A +L++M
Sbjct: 116 MVKGYMQEGMVGEAESLFWRMP-ERNEVSWTVMFGGLIDDGRIDK--------ARKLYDM 166
Query: 641 EVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
++D M L G+ + + MRER +
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVV 204
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/655 (33%), Positives = 374/655 (57%), Gaps = 71/655 (10%)
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQ-VHSHVVKLGHDSAVIICNSLIDSY------------ 184
D F LL C K+ + VH+ V+K G + + I N LID+Y
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 185 -------------------CKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAI 225
K+ +D A L++ MP+RD T+N++++G+A +EA+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 226 KLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY 285
F M GF ++++F +VL A GL+D+ G Q+H K+ + +V++G+AL+D Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
SK + +A+++F +M + + VS+N +IT + G E++++F+ + ++ + A
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTA-DSEVLVANALVDMYAKCRRPEEAERIF----- 399
+++S A++ +++G+++H + + ++++++NA VDMYAKC R +EA IF
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 400 --------------------------VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
K++ R V W A+I+ QNG EE+L LF +
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM------SSIYAGSALVDMY 487
+R++V +FA++LKA A+LA + LG Q H ++++ GF I+ G++L+DMY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 488 AKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
KCG +++ +F++M ER+ VSWNA+I +A NG G L+LF EM+ G +PD ++ +
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 548 CVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPF 607
V +AC H G VEEG YF+SMT+ + + P R+HY +VD+L R+G ++A+ +I EMP
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 608 DPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGK 667
PD ++W S+L +C++H+N L K AE+L +E ++ PYV +SN+ AE G+WE V
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP-SNSGPYVLLSNMYAELGKWEDVMN 616
Query: 668 VKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKE 722
V+K+MR+ G+TK P SW++I+ H+F DK+HP+ K+I +DIL +M E
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/529 (29%), Positives = 258/529 (48%), Gaps = 40/529 (7%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ A ++K+GF N I + G L + R++FD+MP RN + N +++G K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L A +F SM ER+ T+ ++ G+++ D+ EA F M + G + +F ++LS
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C+ + QVHS + K S V I ++L+D Y K V+ A +++ EM R+ V++
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
N+LI + G EA+ +F M + E + T +V+ A L I GQ++HG VK
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 269 TTLIWN-VFVGNALLDFYSKHDCLVEARKLFYKMP------------------------- 302
+ N + + NA +D Y+K + EAR +F MP
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 303 ------ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
E + VS+N +I Y G +E+++LF L+ ++ FA +L A++ +
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 357 LQMGRQLHSQAI------VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPW 410
L +G Q H + + + ++ V N+L+DMY KC EE +F K+ R V W
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
AMI QNG+ E+L+LF EM D T VL A + + G+ S + R
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 471 SGFMSSIYAG-SALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
++ + + +VD+ + G L++A + +EMP + + V W +L++A
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 152/321 (47%), Gaps = 15/321 (4%)
Query: 7 KIPLKNLSSLAAKNSYPNVKTCIDARIVKTG-FDPSTSRSNYQIMDLVQTGQLSEARELF 65
++ L ++ S A S V + R+VK SN + + ++ EAR +F
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 66 DQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFK 125
D MP RN I+ MISGY A+ +F M ERN V++ LI GY+++ + EA
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 126 LFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK------LGHDSAVIICNS 179
LF + R P + +F +L C D + Q H HV+K G + + + NS
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
LID Y K CV+ ++++M +RD V++NA+I G+A G+ EA++LF EM + G +
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV----GNALLDFYSKHDCLVEAR 295
T VL A F ++ Y T + V ++D + L EA+
Sbjct: 493 HITMIGVLSA---CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAK 549
Query: 296 KLFYKMP-ELDGVSYNMMITA 315
+ +MP + D V + ++ A
Sbjct: 550 SMIEEMPMQPDSVIWGSLLAA 570
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/634 (36%), Positives = 368/634 (58%), Gaps = 10/634 (1%)
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG 250
+L + + + + D ++N++IA A G + EA+ F MR L + +F + A
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 251 IGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYN 310
L DI G+Q H A ++FV +AL+ YS L +ARK+F ++P+ + VS+
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 311 MMITAYAWTGLIKESINLFRKLQFTKYDRRNFPF------ATMLSLAANMLDLQMGRQLH 364
MI Y G ++++LF+ L + D + F +++S + + + +H
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 365 SQAIVTTADSEVLVANALVDMYAKCRRP--EEAERIFVKLSSRCTVPWTAMISANVQNGH 422
S I D V V N L+D YAK A +IF ++ + V + +++S Q+G
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 423 FEESLKLFSEMRRDNV-TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGS 481
E+ ++F + ++ V T + T ++VL A ++ ++ +GK +H +IR G + G+
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 482 ALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
+++DMY KCG ++ A + F M +NV SW A+I+ Y +G L+LF M+ G +P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
+ ++F+ V ACSH GL EG R+FN+M + + P EHY +VD+L R+G KA L
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 602 IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
I M PD I+WSS+L +CRIHKN +LA+ + +LF ++ + Y+ +S+I A+AG+
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS-SNCGYYMLLSHIYADAGR 505
Query: 662 WESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEK 721
W+ V +V+ M+ RGL K P +S +E+ +VH+F D+ HPQ ++I + L+ ++ +
Sbjct: 506 WKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLE 565
Query: 722 EGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAA 781
GYV +TS H+ DE+ K +L+ HSE+LAIAF +++T GS + V+KNLR C+DCH
Sbjct: 566 AGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNV 625
Query: 782 IKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
IK+ISKIV RE VRD+ RFHHFKDG CSC DYW
Sbjct: 626 IKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 215/439 (48%), Gaps = 20/439 (4%)
Query: 95 IFDSMVERNAV-TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPK 153
+F+ V++ V ++ +I ++S EA F M + P +F + C+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 154 MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIA 213
I Q H G+ S + + ++LI Y ++ A +++ E+P+R+ V++ ++I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 214 GYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI----------AFGQQIH 263
GY G +A+ LF +DL + +D A+ +GL + + IH
Sbjct: 151 GYDLNGNALDAVSLF---KDLLVDEND-DDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 264 GYAVKTTLIWNVFVGNALLDFYSK--HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
+ +K V VGN LLD Y+K + ARK+F ++ + D VSYN +++ YA +G+
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 322 IKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN 380
E+ +FR+L K N +T+L ++ L++G+ +H Q I + +V+V
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA 440
+++DMY KC R E A + F ++ ++ WTAMI+ +GH ++L+LF M V
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 441 DQATFASVLKASANLA-SISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
+ TF SVL A ++ + + ++ R G + +VD+ + G L+ A +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 500 FKEMPER-NVVSWNALISA 517
+ M + + + W++L++A
Sbjct: 447 IQRMKMKPDSIIWSSLLAA 465
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 136/264 (51%), Gaps = 11/264 (4%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
S+ +I Y GKL A+++FD + +RN V++T +I GY + ++A LF +
Sbjct: 114 SSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173
Query: 136 KPDYVTF------VTLLSGCNDPKMIKGLFQ-VHSHVVKLGHDSAVIICNSLIDSYCK-- 186
D F V+++S C+ KGL + +HS V+K G D V + N+L+D+Y K
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPA-KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG 232
Query: 187 MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQA 245
V +A +++ ++ +D V+YN++++ YA G + EA ++F + ++ + T
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 246 VLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELD 305
VL A + G+ IH ++ L +V VG +++D Y K + ARK F +M +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 306 GVSYNMMITAYAWTGLIKESINLF 329
S+ MI Y G +++ LF
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELF 376
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 101/182 (55%), Gaps = 3/182 (1%)
Query: 71 RNTISSNVMISGYLK--EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFV 128
R N ++ Y K EG +++A++IFD +V+++ V+Y ++ Y++S EAF++F
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 129 RMCRSGTKP-DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
R+ ++ + +T T+L + ++ +H V+++G + VI+ S+ID YCK
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 188 HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
V+ A + + M ++ ++ A+IAGY G +A++LF M D G + TF +VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 248 YA 249
A
Sbjct: 396 AA 397
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ I +I Y K G++ A++ FD M +N ++T +I GY +A +LF M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 132 RSGTKPDYVTFVTLLSGCNDPKM-IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
SG +P+Y+TFV++L+ C+ + ++G ++ + G + + ++D + +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 191 DLASQLYKEMPQR-DSVTYNALIA 213
A L + M + DS+ +++L+A
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLA 464
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 25 VKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYL 84
+ CI ++++ G + I + G++ AR+ FD+M +N S MI+GY
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 85 KEGKLSIAKEIF----DSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM-CRSGTKPD- 138
G + A E+F DS V N +T+ ++ S + +E ++ F M R G +P
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 139 --YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMH-CVDLASQ 195
Y V LL + L Q +K+ DS II +SL+ + C++H V+LA
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQ----RMKMKPDS--IIWSSLL-AACRIHKNVELAEI 477
Query: 196 LYKEMPQRDSVT---YNALIAGYANEGFNKEAIKLFMEMRDLGF 236
+ + DS Y L YA+ G K+ ++ M M++ G
Sbjct: 478 SVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGL 521
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/541 (38%), Positives = 337/541 (62%), Gaps = 6/541 (1%)
Query: 275 VFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQF 334
+F+ N L++ Y K + L +A +LF +MP+ + +S+ MI+AY+ + ++++ L +
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
+ ++++L M D++M LH I +S+V V +AL+D++AK PE+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASAN 454
A +F ++ + + W ++I QN + +L+LF M+R A+QAT SVL+A
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 455 LASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNAL 514
LA + LG Q H +I++ + + +ALVDMY KCGSL+DA+++F +M ER+V++W+ +
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 515 ISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYK 574
IS A NG + LKLFE M G +P+ ++ + V ACSH GL+E+G YF SM K+Y
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 575 LVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAA 634
+ P REHY ++D+L ++GK D A KL+ EM +PD + W ++L +CR+ +N LA+ AA
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAA 450
Query: 635 EQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHI 694
+++ ++ DA Y +SNI A + +W+SV +++ MR+RG+ K P SW+E+ ++H
Sbjct: 451 KKVIALDP-EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHA 509
Query: 695 FCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIA 754
F D +HPQ+ E+ K++ L ++ GYVP+T+ L + + + +SL++HSE+LA+A
Sbjct: 510 FIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALA 569
Query: 755 FALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDY 814
F L++ P I + KNLR C DCH K+ SK+ R I +RD R+HHF+DG CSC DY
Sbjct: 570 FGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDY 629
Query: 815 W 815
W
Sbjct: 630 W 630
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 205/428 (47%), Gaps = 36/428 (8%)
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKP----------------DYVTFVTLLSGCNDPKMIKG 157
YS +DQ + F R+C P D T+ L+ C + +
Sbjct: 21 YSSTDQTL-LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYAN 217
+ H+ GH + + N LI+ Y K + ++ A QL+ +MPQR+ +++ +I+ Y+
Sbjct: 80 GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSK 139
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
+++A++L + M + +T+ +VL + G+ D+ + +H +K L +VFV
Sbjct: 140 CKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFV 196
Query: 278 GNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKY 337
+AL+D ++K +A +F +M D + +N +I +A ++ LF++++ +
Sbjct: 197 RSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGF 256
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
++L + L++G Q H + D ++++ NALVDMY KC E+A R
Sbjct: 257 IAEQATLTSVLRACTGLALLELGMQAHVH--IVKYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
+F ++ R + W+ MIS QNG+ +E+LKLF M+ + T VL A ++
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 458 ISLGKQLHSYIIRSGFMSSIYA-------GSALVDMYAKCGSLKDAIQIFKEMP-ERNVV 509
+ G Y RS M +Y ++D+ K G L DA+++ EM E + V
Sbjct: 375 LEDG----WYYFRS--MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 428
Query: 510 SWNALISA 517
+W L+ A
Sbjct: 429 TWRTLLGA 436
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 144/257 (56%), Gaps = 5/257 (1%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
NV+I+ Y+K L+ A ++FD M +RN +++T +I YSK +A +L V M R +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
P+ T+ ++L CN ++ L H ++K G +S V + ++LID + K+ + A +
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRML---HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+ EM D++ +N++I G+A + A++LF M+ GF T +VL A GL +
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G Q H + VK ++ + NAL+D Y K L +A ++F +M E D ++++ MI+
Sbjct: 277 ELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL 334
Query: 317 AWTGLIKESINLFRKLQ 333
A G +E++ LF +++
Sbjct: 335 AQNGYSQEALKLFERMK 351
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
+ +I + K G+ A +FD MV +A+ + +IGG++++ + A +LF RM R+G
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+ T ++L C +++ Q H H+VK +D +I+ N+L+D YCK ++ A ++
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+ +M +RD +T++ +I+G A G+++EA+KLF M+ G + + T VL+A
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 368
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 116/237 (48%), Gaps = 31/237 (13%)
Query: 426 SLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVD 485
++K ++ + AD AT++ ++K + ++ G + ++ +G ++ + L++
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 486 MYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
MY K L DA Q+F +MP+RNV+SW +ISAY+ + L+L M+ +P+ +
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 546 FLCVFTACS--------HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDK 597
+ V +C+ H G+++EGL + V+ ++++DV + G+ +
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLE-----SDVFV-------RSALIDVFAKLGEPED 212
Query: 598 AEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLA-------KRA---AEQLFNMEVLR 644
A + EM D I+W+SI+ + D+A KRA AEQ VLR
Sbjct: 213 ALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
++ I +N ++ Y K G L A +F+ M ER+ +T++ +I G +++ EA KLF RM
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIK-GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHC 189
SGTKP+Y+T V +L C+ +++ G + S G D +ID K
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGK 410
Query: 190 VDLASQLYKEMP-QRDSVTYNALIAG 214
+D A +L EM + D+VT+ L+
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRTLLGA 436
>AT5G52630.1 | Symbols: MEF1 | MEF1 (MITOCHONDRIAL RNA EDITING
FACTOR 1) | chr5:21350375-21352141 FORWARD
Length = 588
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/559 (40%), Positives = 341/559 (61%), Gaps = 6/559 (1%)
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G Q+HGY VK+ L V N L++FYSK ++R+ F P+ +++ +I+ +A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 319 TGLIKESINLFRKLQFT--KYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
L S+ +K+ + D P AT + D+ GR +H ++ T D++V
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI--GRSVHCLSMKTGYDADV 151
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
V ++LVDMYAKC A ++F ++ R V W+ M+ Q G EE+L LF E +
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
N+ + +F+SV+ AN + LG+Q+H I+S F SS + GS+LV +Y+KCG + A
Sbjct: 212 NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
Q+F E+P +N+ WNA++ AYA + + ++LF+ M L G +P+ ++FL V ACSH
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
GLV+EG YF+ M K ++ P +HYAS+VD+L R+G+ +A ++I MP DP E +W +
Sbjct: 332 GLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+L SC +HKN +LA AA+++F + + + ++++SN A G++E K +K +R+RG
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPV-SSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 677 LTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNED 736
K SWVE ++KVH F A ++ H + KEI K+ L E+MEK GY+ DTS L D
Sbjct: 450 EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVD 509
Query: 737 EDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVR 796
D K ++++YHSERLAIAF LI+ P PI VMKNLR C DCH AIK +S R I VR
Sbjct: 510 GDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVR 569
Query: 797 DSSRFHHFKDGICSCRDYW 815
D++RFH F+DG CSC DYW
Sbjct: 570 DNNRFHRFEDGKCSCNDYW 588
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 210/393 (53%), Gaps = 6/393 (1%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
LLS IKGL Q+H +VVK G ++ N+LI+ Y K + + +++ PQ+
Sbjct: 22 LLSSARTRSTIKGL-QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
S T++++I+ +A +++ +M D + + L G+ +H
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
++KT +VFVG++L+D Y+K +V ARK+F +MP+ + V+++ M+ YA G +E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
++ LF++ F ++ F++++S+ AN L++GRQ+H +I ++ DS V ++LV
Sbjct: 201 ALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
+Y+KC PE A ++F ++ + W AM+ A Q+ H ++ ++LF M+ + + T
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
F +VL A ++ + G+ + S + ++LVDM + G L++A+++ MP
Sbjct: 321 FLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
Query: 505 ERNVVS-WNALISAYASNGDGE----ATLKLFE 532
S W AL+++ + + E A K+FE
Sbjct: 381 IDPTESVWGALLTSCTVHKNTELAAFAADKVFE 413
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 92/171 (53%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
++ Y K G++ A+++FD M +RN VT++ ++ GY++ + EA LF +
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
+F +++S C + +++ Q+H +K DS+ + +SL+ Y K + A Q++
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFN 276
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
E+P ++ +NA++ YA ++ I+LF M+ G + + TF VL A
Sbjct: 277 EVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 346/574 (60%), Gaps = 14/574 (2%)
Query: 252 GLDDIAFGQQIHGYAVKTTL-IWNVFVGNALLDFY----SKHDCLVEARKLFYKMPE-LD 305
G+ I +QIH ++++ + I + +G L+ FY + A K+F K+ + ++
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPIN 84
Query: 306 GVSYNMMITAYAWTGLIKESINLFRKLQ---FTKYDRRNFPFATMLSLAANMLDLQMGRQ 362
+N +I YA G + +L+R+++ + D +PF ++ M D+++G
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPF--LIKAVTTMADVRLGET 142
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH 422
+HS I + S + V N+L+ +YA C A ++F K+ + V W ++I+ +NG
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
EE+L L++EM + D T S+L A A + +++LGK++H Y+I+ G ++++ +
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 483 LVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEM-VLLGYQP 541
L+D+YA+CG +++A +F EM ++N VSW +LI A NG G+ ++LF+ M G P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
++F+ + ACSH G+V+EG YF M + YK+ P+ EH+ +VD+L R+G+ KA +
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 602 IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
I MP P+ ++W ++L +C +H + DLA+ A Q+ +E + YV +SN+ A +
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEP-NHSGDYVLLSNMYASEQR 441
Query: 662 WESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEK 721
W V K++K M G+ KVP +S VE+ ++VH F DK+HPQ I K+ ++ ++
Sbjct: 442 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 501
Query: 722 EGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAA 781
EGYVP S + +E+ K ++ YHSE++AIAF LISTPE SPI V+KNLR C DCH A
Sbjct: 502 EGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLA 561
Query: 782 IKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
IK++SK+ REI VRD SRFHHFK+G CSC+DYW
Sbjct: 562 IKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 171/343 (49%), Gaps = 14/343 (4%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGF-ETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
+N LI GYA G + A L+ EMR G E T+ ++ A + D+ G+ IH
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
+++ ++V N+LL Y+ + A K+F KMPE D V++N +I +A G +E++
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 327 NLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
L+ ++ F ++LS A + L +G+++H I + +N L+D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 387 AKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR-DNVTADQATF 445
A+C R EEA+ +F ++ + +V WT++I NG +E+++LF M + + + TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 446 ASVLKASANLASISLG-----KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
+L A ++ + G + Y I I +VD+ A+ G +K A +
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIE----PRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 501 KEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
K MP + NVV W L+ A +GD + L F + +L +P+
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 424
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 139/253 (54%), Gaps = 8/253 (3%)
Query: 89 LSIAKEIFDSMVER--NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG-TKPDYVTFVTL 145
+S A ++F S +E+ N + LI GY++ I AF L+ M SG +PD T+ L
Sbjct: 69 MSYAHKVF-SKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS--QLYKEMPQR 203
+ ++ +HS V++ G S + + NSL+ Y +C D+AS +++ +MP++
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYA--NCGDVASAYKVFDKMPEK 185
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIH 263
D V +N++I G+A G +EA+ L+ EM G + FT ++L A + + G+++H
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIK 323
Y +K L N+ N LLD Y++ + EA+ LF +M + + VS+ +I A G K
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 324 ESINLFRKLQFTK 336
E+I LF+ ++ T+
Sbjct: 306 EAIELFKYMESTE 318
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N ++ Y G ++ A ++FD M E++ V + +I G++++ + EA L+ M G K
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
PD T V+LLS C + +VH +++K+G + N L+D Y + V+ A L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDL-GFETSDFTFQAVLYA 249
+ EM ++SV++ +LI G A GF KEAI+LF M G + TF +LYA
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
RN SSNV++ Y + G++ AK +FD MV++N+V++T LI G + + EA +LF M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 131 -CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQ 160
G P +TFV +L C+ M+K F+
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
>AT3G15130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5097153-5099222 REVERSE
Length = 689
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/685 (33%), Positives = 379/685 (55%), Gaps = 13/685 (1%)
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM 200
V++L C + QVH +++K G +I N LID YCK +A +++ M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
P+R+ V+++AL++G+ G K ++ LF EM G ++FTF L A L+ + G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTG 320
QIHG+ +K V VGN+L+D YSK + EA K+F ++ + +S+N MI + G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 321 LIKESINLFRKLQFTKYDRR--NFPFATMLSLAANMLDLQMGRQLHSQAIVTT--ADSEV 376
++++ F +Q R F ++L ++ + G+Q+H + + S
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
+ +LVD+Y KC A + F ++ + + W+++I Q G F E++ LF ++
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIR--SGFMSSIYAGSALVDMYAKCGSLK 494
N D +S++ A+ A + GKQ+ + ++ SG +S+ +++VDMY KCG +
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVD 365
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
+A + F EM ++V+SW +I+ Y +G G+ ++++F EM+ +PD V +L V +ACS
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMW 614
H G+++EG F+ + + + + P+ EHYA +VD+L R+G+ +A+ LI MP P+ +W
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 615 SSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
++L+ CR+H + +L K + L ++ ++ A YV MSN+ +AG W G ++
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDA-KNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 675 RGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKE-GYVPDTSCALH 733
+GL K SWVEI+ +VH F + + +HP I + ++ +E GYV LH
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELH 604
Query: 734 NEDEDIKVESLKYHSERLAIAFALIS---TPEGSPILVMKNLRACTDCHAAIKVISKIVG 790
+ D++ K E+L+ HSE+LAI AL + +G I V KNLR C DCH IK +SKI
Sbjct: 605 DIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITK 664
Query: 791 REITVRDSSRFHHFKDGICSCRDYW 815
VRD+ RFH F+DG CSC DYW
Sbjct: 665 IAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 249/460 (54%), Gaps = 6/460 (1%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N I+SN +I Y K + +A ++FDSM ERN V+++ L+ G+ + + LF M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
R G P+ TF T L C ++ Q+H +K+G + V + NSL+D Y K ++
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE--TSDFTFQAVLYA 249
A ++++ + R +++NA+IAG+ + G+ +A+ F M++ + +FT ++L A
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 250 GIGLDDIAFGQQIHGYAVKTTLIW--NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV 307
I G+QIHG+ V++ + + +L+D Y K L ARK F ++ E +
Sbjct: 220 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
S++ +I YA G E++ LF++LQ +F ++++ + A+ L+ G+Q+ + A
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESL 427
+ + E V N++VDMY KC +EAE+ F ++ + + WT +I+ ++G ++S+
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 428 KLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDM 486
++F EM R N+ D+ + +VL A ++ I G++L S ++ + G + + +VD+
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 459
Query: 487 YAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGE 525
+ G LK+A + MP + NV W L+S +GD E
Sbjct: 460 LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 191/440 (43%), Gaps = 51/440 (11%)
Query: 7 KIPLKNLSSLAAKNSYPN-------VKTC-----------IDARIVKTGFDPSTSRSNYQ 48
K L S + + YPN +K C I +K GF+ N
Sbjct: 89 KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSL 148
Query: 49 IMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYT 108
+ + G+++EA ++F ++ R+ IS N MI+G++ G S A + F M E N
Sbjct: 149 VDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI---- 204
Query: 109 LLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL 168
+PD T +LL C+ MI Q+H +V+
Sbjct: 205 -------------------------KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 169 GHD--SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIK 226
G S+ I SL+D Y K + A + + ++ ++ +++++LI GYA EG EA+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 227 LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYS 286
LF +++L + F +++ + G+Q+ AVK V N+++D Y
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 287 KHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFAT 346
K + EA K F +M D +S+ ++IT Y GL K+S+ +F ++ + +
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLA 419
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTA-DSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
+LS ++ ++ G +L S+ + T V +VD+ + R +EA+ + + +
Sbjct: 420 VLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK 479
Query: 406 CTVP-WTAMISANVQNGHFE 424
V W ++S +G E
Sbjct: 480 PNVGIWQTLLSLCRVHGDIE 499
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/548 (39%), Positives = 336/548 (61%), Gaps = 15/548 (2%)
Query: 274 NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
+ F N +L Y ++ +A+ F +MP D S+N MIT YA G ++++ LF
Sbjct: 37 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF---- 92
Query: 334 FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
++ ++ + M+S DL+ A V V+ A++ Y K ++ E
Sbjct: 93 YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVE 148
Query: 394 EAERIFVKLS-SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKAS 452
AE +F ++ ++ V W AMIS V+N E+ LKLF M + + + + +S L
Sbjct: 149 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 208
Query: 453 ANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWN 512
+ L+++ LG+Q+H + +S + + A ++L+ MY KCG L DA ++F+ M +++VV+WN
Sbjct: 209 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWN 268
Query: 513 ALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
A+IS YA +G+ + L LF EM+ +PD ++F+ V AC+H GLV G+ YF SM +
Sbjct: 269 AMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRD 328
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
YK+ P+ +HY +VD+L R+GK ++A KLI MPF P ++ ++L +CR+HKN +LA+
Sbjct: 329 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEF 388
Query: 633 AAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL-----TKVPAYSWVE 687
AAE+L + ++AA YV ++NI A +WE V +V+K M+E + KVP YSW+E
Sbjct: 389 AAEKLLQLNS-QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVERVKVPGYSWIE 447
Query: 688 IKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYH 747
I++KVH F ++D+ HP++ I K+ L ++M+ GY P+ ALHN +E+ K + L +H
Sbjct: 448 IRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWH 507
Query: 748 SERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDG 807
SE+LA+AF I P+GS I V KNLR C DCH AIK IS+I REI VRD++RFHHFKDG
Sbjct: 508 SEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDG 567
Query: 808 ICSCRDYW 815
CSC DYW
Sbjct: 568 SCSCGDYW 575
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 209/458 (45%), Gaps = 51/458 (11%)
Query: 57 QLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSK 116
++ EA +LFD++P +T S N+M+S Y++ A+ FD M ++A ++ +I GY++
Sbjct: 22 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYAR 81
Query: 117 SDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG---CNDPKMIKGLFQVHSHVVKLGHDSA 173
+ +A +LF M + + V++ ++SG C D + SH K+
Sbjct: 82 RGEMEKARELFYSM----MEKNEVSWNAMISGYIECGD-------LEKASHFFKVAPVRG 130
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMP-QRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
V+ ++I Y K V+LA ++K+M ++ VT+NA+I+GY ++ +KLF M
Sbjct: 131 VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 190
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
+ G + + L L + G+QIH K+TL +V +L+ Y K L
Sbjct: 191 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 250
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
+A KLF M + D V++N MI+ YA G +++ LFR++ K F +L LA
Sbjct: 251 DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL-LAC 309
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
N L + A E +V + V+ +P+ +T
Sbjct: 310 NHAGL---------VNIGMAYFESMVRDYKVE-----PQPDH---------------YTC 340
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
M+ + G EE+LKL M A F ++L A ++ L + +++
Sbjct: 341 MVDLLGRAGKLEEALKLIRSM---PFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ-- 395
Query: 473 FMSSIYAGSA-LVDMYAKCGSLKDAIQIFKEMPERNVV 509
S AG L ++YA +D ++ K M E NVV
Sbjct: 396 LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 433
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 173/408 (42%), Gaps = 66/408 (16%)
Query: 46 NYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM-VERNA 104
N I ++ G L +A F P R ++ MI+GY+K K+ +A+ +F M V +N
Sbjct: 104 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 163
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSH 164
VT+ +I GY ++ + + KLF M G +P+ + L GC++ ++ Q+H
Sbjct: 164 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 223
Query: 165 VVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEA 224
V K + V SLI YCK + A +L++ M ++D V +NA+I+GYA G +A
Sbjct: 224 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 283
Query: 225 IKLFMEMRDLGFETSDFTFQAVLYA--GIGLDDIA---FGQQIHGYAVKTTLIWNVFVGN 279
+ LF EM D TF AVL A GL +I F + Y V+
Sbjct: 284 LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE----------- 332
Query: 280 ALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR 339
P+ D Y M+ G ++E++ L R + F +
Sbjct: 333 ----------------------PQPD--HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAA 368
Query: 340 RNFPFATMLSLAANMLDLQMGR-------QLHSQAIVTTADSEVLVANALVDMYAKCRRP 392
F T+L ++++ QL+SQ A V +AN +YA R
Sbjct: 369 ---VFGTLLGACRVHKNVELAEFAAEKLLQLNSQ----NAAGYVQLAN----IYASKNRW 417
Query: 393 EEAERIFVKLS-------SRCTVPWTAMISANVQNGHFEESLKLFSEM 433
E+ R+ ++ R VP + I + HF S ++ E+
Sbjct: 418 EDVARVRKRMKESNVVKVERVKVPGYSWIEIRNKVHHFRSSDRIHPEL 465
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 391 RPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLK 450
R EA ++F ++ T + M+S V+N +FE++ F M D A++ +++
Sbjct: 22 RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMIT 77
Query: 451 ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER---- 506
A + ++L ++ +S +A++ Y +CG L+ A FK P R
Sbjct: 78 GYARRGEMEKARELFYSMMEKNEVS----WNAMISGYIECGDLEKASHFFKVAPVRGVVA 133
Query: 507 ----------------------------NVVSWNALISAYASNGDGEATLKLFEEMVLLG 538
N+V+WNA+IS Y N E LKLF M+ G
Sbjct: 134 WTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 193
Query: 539 YQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKA 598
+P+S CS ++ G R + + L S++ + C+ G+ A
Sbjct: 194 IRPNSSGLSSALLGCSELSALQLG-RQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 252
Query: 599 EKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM 652
KL M D + W+++++ H N D A ++ + ++ D +V +
Sbjct: 253 WKLFEVMK-KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV 305
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | EMB175 (EMBRYO
DEFECTIVE 175); catalytic | chr5:1010894-1013584 REVERSE
Length = 896
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 257/793 (32%), Positives = 407/793 (51%), Gaps = 44/793 (5%)
Query: 65 FDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAF 124
F ++ T N +IS YLK G A +F S+ V+YT LI G+S+ + IEA
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 125 KLFVRMCRSG-TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
K+F RM ++G +P+ TFV +L+ C Q+H +VK G ++V + NSL+
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 184 YCK---MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETS 239
Y K C D+ +L+ E+PQRD ++N +++ EG + +A LF EM R GF
Sbjct: 226 YDKDSGSSCDDVL-KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVD 284
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY 299
FT +L + + G+++HG A++ L+ + V NAL+ FYSK + + L+
Sbjct: 285 SFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYE 344
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ-------------------------- 333
M D V++ MITAY G++ ++ +F +
Sbjct: 345 MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKL 404
Query: 334 FTKYDRR-----NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK 388
FT +R +F + + + + ++ Q+H I + AL+DM +
Sbjct: 405 FTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTR 464
Query: 389 CRRPEEAERIFVKLSSR--CTVPWTAMISANVQNGHFEESLKLFSE-MRRDNVTADQATF 445
C R +AE +F + S + T++I +NG ++++ LF + + D+ +
Sbjct: 465 CERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSL 524
Query: 446 ASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
+L L +G Q+H Y +++G+ S I G++L+ MYAKC DAI+IF M E
Sbjct: 525 TLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMRE 584
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW--GLVEEGL 563
+V+SWN+LIS Y +G+ L L+ M +PD ++ V +A + +
Sbjct: 585 HDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCR 644
Query: 564 RYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRI 623
F SM +Y + P EHY + V VL G ++AE I MP P+ + ++L+SCRI
Sbjct: 645 DLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRI 704
Query: 624 HKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAY 683
H N +AKR A+ + + + + Y+ SNI + +G W +++ MRERG K PA
Sbjct: 705 HSNTSVAKRVAKLILSTKP-ETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAK 763
Query: 684 SWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVES 743
SW+ ++K+H F A D +HPQ K+I ++IL + K GY P+T L DE +K
Sbjct: 764 SWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSF 823
Query: 744 LKYHSERLAIAFALIST-PEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFH 802
L +HS +LA+ + ++S+ G P+ VMKN+ C DCH K IS +V REI +RDSS FH
Sbjct: 824 LFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFH 883
Query: 803 HFKDGICSCRDYW 815
HF +G CSCRD W
Sbjct: 884 HFVNGKCSCRDLW 896
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 209/439 (47%), Gaps = 26/439 (5%)
Query: 29 IDARIVKTGFDPSTSRSN--YQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKE 86
I IVK+GF S SN + D + +LFD++P R+ S N ++S +KE
Sbjct: 203 IHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKE 262
Query: 87 GKLSIAKEIFDSMVERNAV--------TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
GK + + FD E N V T + L+ + S + +L R R G +
Sbjct: 263 GK---SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQE 319
Query: 139 YVT---FVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
+ S D K ++ L++ + + D+ +I +Y VD A +
Sbjct: 320 LSVNNALIGFYSKFWDMKKVESLYE-----MMMAQDAVTF--TEMITAYMSFGMVDSAVE 372
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ + +++++TYNAL+AG+ G +A+KLF +M G E +DF+ + + A + +
Sbjct: 373 IFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSE 432
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP-ELDGV-SYNMMI 313
+QIHG+ +K +N + ALLD ++ + + +A ++F + P LD + +I
Sbjct: 433 KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSII 492
Query: 314 TAYAWTGLIKESINLF-RKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
YA GL ++++LF R L K +L++ + +MG Q+H A+
Sbjct: 493 GGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
S++ + N+L+ MYAKC ++A +IF + + W ++IS + + +E+L L+S
Sbjct: 553 FSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 433 MRRDNVTADQATFASVLKA 451
M + D T V+ A
Sbjct: 613 MNEKEIKPDIITLTLVISA 631
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/671 (32%), Positives = 379/671 (56%), Gaps = 7/671 (1%)
Query: 58 LSEARELFDQMPYRN----TISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
L++ R++ D + N TI +N ++S Y K G L A+E+FD M ERN V+YT +I G
Sbjct: 83 LAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITG 142
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
YS++ Q EA +L+++M + PD F +++ C + Q+H+ V+KL S
Sbjct: 143 YSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSH 202
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
+I N+LI Y + + + AS+++ +P +D ++++++IAG++ GF EA+ EM
Sbjct: 203 LIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLS 262
Query: 234 LG-FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
G F +++ F + L A L +G QIHG +K+ L N G +L D Y++ L
Sbjct: 263 FGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLN 322
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
AR++F ++ D S+N++I A G E++++F +++ + + ++L
Sbjct: 323 SARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC-TVPWT 411
+ L G Q+HS I +++ V N+L+ MY C +F + +V W
Sbjct: 383 KPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
+++A +Q+ E L+LF M D T ++L+ ++S+ LG Q+H Y +++
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT 502
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
G + + L+DMYAKCGSL A +IF M R+VVSW+ LI YA +G GE L LF
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILF 562
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCR 591
+EM G +P+ V+F+ V TACSH GLVEEGL+ + +M + + P +EH + +VD+L R
Sbjct: 563 KEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLAR 622
Query: 592 SGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVT 651
+G+ ++AE+ I EM +PD ++W ++L++C+ N LA++AAE + ++ A +V
Sbjct: 623 AGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA-HVL 681
Query: 652 MSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILK 711
+ ++ A +G WE+ ++ +M++ + K+P SW+EI+ K+HIF A D HP+ +I
Sbjct: 682 LCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTV 741
Query: 712 IDILSEQMEKE 722
+ + QM E
Sbjct: 742 LHNIWSQMLDE 752
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/616 (36%), Positives = 355/616 (57%), Gaps = 11/616 (1%)
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGY 265
++ N LI EG K+AI++ + S T++ ++ ++ ++H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKES 325
+ + F+ L+ YS + ARK+F K + +N + A G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 326 INLFRKLQFTKYDRRNFPFATMLSLAA----NMLDLQMGRQLHSQAIVTTADSEVLVANA 381
+ L+ K+ + F + +L + L G+++H+ S V +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD--NVT 439
LVDMYA+ + A +F + R V W+AMI+ +NG E+L+ F EM R+ + +
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
+ T SVL+A A+LA++ GK +H YI+R G S + SALV MY +CG L+ ++
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 500 FKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLV 559
F M +R+VVSWN+LIS+Y +G G+ +++FEEM+ G P V+F+ V ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 560 EEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILN 619
EEG R F +M + + + P+ EHYA +VD+L R+ + D+A K++ +M +P +W S+L
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462
Query: 620 SCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTK 679
SCRIH N +LA+RA+ +LF +E ++A YV +++I AEA W+ V +VKK + RGL K
Sbjct: 463 SCRIHGNVELAERASRRLFALEP-KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Query: 680 VPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDI 739
+P W+E++ K++ F + D+ +P M++I + L+E M+++GY+P T L+ + +
Sbjct: 522 LPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEE 581
Query: 740 KVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSS 799
K + HSE+LA+AF LI+T +G PI + KNLR C DCH K ISK + +EI VRD +
Sbjct: 582 KERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVN 641
Query: 800 RFHHFKDGICSCRDYW 815
RFH FK+G+CSC DYW
Sbjct: 642 RFHRFKNGVCSCGDYW 657
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 204/420 (48%), Gaps = 12/420 (2%)
Query: 124 FKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
K +R+ + P T+ L+ C + +VH H++ G D + LI
Sbjct: 62 LKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGM 121
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
Y + VD A +++ + +R +NAL G +E + L+ +M +G E+ FT+
Sbjct: 122 YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTY 181
Query: 244 QAVLYAGIG----LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY 299
VL A + ++ + G++IH + + +V++ L+D Y++ C+ A +F
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR--RNFPFATMLSLAANMLDL 357
MP + VS++ MI YA G E++ FR++ D + ++L A++ L
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAAL 301
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISAN 417
+ G+ +H + DS + V +ALV MY +C + E +R+F ++ R V W ++IS+
Sbjct: 302 EQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSY 361
Query: 418 VQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSS 476
+G+ ++++++F EM + + TF SVL A ++ + GK+L + R G
Sbjct: 362 GVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Query: 477 IYAGSALVDMYAKCGSLKDAIQIFKEM-PERNVVSWNALISAYASNGDGE----ATLKLF 531
I + +VD+ + L +A ++ ++M E W +L+ + +G+ E A+ +LF
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLF 481
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 181/377 (48%), Gaps = 21/377 (5%)
Query: 39 DPSTSRSNYQIMDLV--QTGQLSEA----RELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
+ S S+ Y+++ L LS+A R + D ++ + +I Y G + A
Sbjct: 72 ESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYA 131
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL-----S 147
+++FD +R + L + + E L+ +M R G + D T+ +L S
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVAS 191
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C ++KG ++H+H+ + G+ S V I +L+D Y + CVD AS ++ MP R+ V+
Sbjct: 192 ECTVNHLMKGK-EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-----FTFQAVLYAGIGLDDIAFGQQI 262
++A+IA YA G EA++ F EM ET D T +VL A L + G+ I
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMR---ETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
HGY ++ L + V +AL+ Y + L +++F +M + D VS+N +I++Y G
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA-DSEVLVANA 381
K++I +F ++ F ++L ++ ++ G++L ++
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 382 LVDMYAKCRRPEEAERI 398
+VD+ + R +EA ++
Sbjct: 428 MVDLLGRANRLDEAAKM 444
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/660 (35%), Positives = 366/660 (55%), Gaps = 6/660 (0%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N + ++S Y K K+ A ++F+++ E+N V + +I GY+ + + + +LF+ M
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
SG D TF +LLS C ++ Q HS ++K + + N+L+D Y K ++
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A Q+++ M RD+VT+N +I Y + EA LF M G + + L A
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
+ + G+Q+H +VK L ++ G++L+D YSK + +ARK+F +PE VS N
Sbjct: 541 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
+I Y+ L +E++ LF+++ + FAT++ L +G Q H Q
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 372 ADSE-VLVANALVDMYAKCRRPEEAERIFVKLSS-RCTVPWTAMISANVQNGHFEESLKL 429
SE + +L+ MY R EA +F +LSS + V WT M+S + QNG +EE+LK
Sbjct: 660 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 719
Query: 430 FSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAK 489
+ EMR D V DQATF +VL+ + L+S+ G+ +HS I + L+DMYAK
Sbjct: 720 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 779
Query: 490 CGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLC 548
CG +K + Q+F EM R NVVSWN+LI+ YA NG E LK+F+ M PD ++FL
Sbjct: 780 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 839
Query: 549 VFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD 608
V TACSH G V +G + F M Y + + +H A +VD+L R G +A+ I
Sbjct: 840 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 899
Query: 609 PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKV 668
PD +WSS+L +CRIH + + +AE+L +E ++++ YV +SNI A G WE +
Sbjct: 900 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEP-QNSSAYVLLSNIYASQGCWEKANAL 958
Query: 669 KKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYV-PD 727
+K MR+RG+ KVP YSW++++ + HIF A DK+H ++ +I + ++ L + M+ + V PD
Sbjct: 959 RKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 188/640 (29%), Positives = 307/640 (47%), Gaps = 71/640 (11%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
RN+ ++ Y K ++S A+ +F+ +V+ N V +T L GY K+ EA +F RM
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
G +PD++ FVT+ I++Y ++ +
Sbjct: 253 RDEGHRPDHLAFVTV-----------------------------------INTYIRLGKL 277
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG 250
A L+ EM D V +N +I+G+ G AI+ F MR +++ T +VL A
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 251 IGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYN 310
+ ++ G +H A+K L N++VG++L+ YSK + + A K+F + E + V +N
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 311 MMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVT 370
MI YA G + + LF ++ + Y+ +F F ++LS A DL+MG Q HS I
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLF 430
+ V NALVDMYAKC E+A +IF ++ R V W +I + VQ+ + E+ LF
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
M + +D A AS LKA ++ + GKQ+H ++ G ++ GS+L+DMY+KC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
G +KDA ++F +PE +VVS NALI+ Y+ N EA + LF+EM+ G P ++F +
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPSEITFATIV 636
Query: 551 TACS-----------HWGLVEEGLR-------------YFNS--MTKVYKLVPKREHYAS 584
AC H + + G Y NS MT+ L + S
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 585 IV------DVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAE 635
IV ++G +++A K EM D PD+ + ++L C + + +
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
+F++ D T+ ++ A+ G + +V MR R
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 240/476 (50%), Gaps = 42/476 (8%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
VHS + LG DS + N+++D Y K V A + + + ++D +N++++ Y++ G
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGK 140
Query: 221 NKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
+ ++ F+ + + + FTF VL ++ FG+QIH +K L N + G A
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGA 200
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
L+D Y+K D + +AR++F + + + V + + + Y GL +E++ +F +++ +
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260
Query: 341 NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
+ F T +++ Y + + ++A +F
Sbjct: 261 HLAFVT-----------------------------------VINTYIRLGKLKDARLLFG 285
Query: 401 KLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISL 460
++SS V W MIS + + G +++ F MR+ +V + ++T SVL A +A++ L
Sbjct: 286 EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345
Query: 461 GKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYAS 520
G +H+ I+ G S+IY GS+LV MY+KC ++ A ++F+ + E+N V WNA+I YA
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 521 NGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
NG+ ++LF +M GY D +F + + C+ +E G + F+S+ KL
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLF 464
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ----DLAKR 632
++VD+ + G + A ++ M D D + W++I+ S +N+ DL KR
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMC-DRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 41/306 (13%)
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
L L++G+ +HS++++ DSE + NA+VD+YAKC + AE+ F L T W +M+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVT-AWNSML 132
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM 474
S G + L+ F + + + ++ TF+ VL A ++ G+Q+H +I+ G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEM 534
+ Y G ALVDMYAKC + DA ++F+ + + N V W L S Y G E + +FE M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 535 VLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGK 594
G++PD ++F+ ++++ R GK
Sbjct: 253 RDEGHRPDHLAFV------------------------------------TVINTYIRLGK 276
Query: 595 FDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSN 654
A L EM PD + W+ +++ H + A E FNM + T+ +
Sbjct: 277 LKDARLLFGEMS-SPDVVAWNVMISG---HGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 655 ILAEAG 660
+L+ G
Sbjct: 333 VLSAIG 338
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 44/283 (15%)
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G+ +H ++ + +GNA++D Y+K + A K F E D ++N M++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSM 134
Query: 316 YAWTG----LIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
Y+ G +++ ++LF F F F+ +LS A +++ GRQ+H I
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPN----KFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
+ ALVDMYAKC R +A R+F + TV WT + S V+ G EE++ +F
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
MR + D F +V ++ Y + G
Sbjct: 251 RMRDEGHRPDHLAFVTV-----------------------------------INTYIRLG 275
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEM 534
LKDA +F EM +VV+WN +IS + G ++ F M
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 150/367 (40%), Gaps = 36/367 (9%)
Query: 34 VKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAK 93
VK G D + I + G + +AR++F +P + +S N +I+GY
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY---------- 605
Query: 94 EIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPK 153
+ EA LF M G P +TF T++ C+ P+
Sbjct: 606 ----------------------SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 154 MIKGLFQVHSHVVKLGHDS-AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS-VTYNAL 211
+ Q H + K G S + SL+ Y + A L+ E+ S V + +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 212 IAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL 271
++G++ GF +EA+K + EMR G TF VL L + G+ IH
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH 763
Query: 272 IWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-VSYNMMITAYAWTGLIKESINLFR 330
+ N L+D Y+K + + ++F +M VS+N +I YA G ++++ +F
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD 823
Query: 331 KLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA-DSEVLVANALVDMYAKC 389
++ + F +L+ ++ + GR++ I ++ V +VD+ +
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 390 RRPEEAE 396
+EA+
Sbjct: 884 GYLQEAD 890
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/702 (32%), Positives = 394/702 (56%), Gaps = 6/702 (0%)
Query: 59 SEARELFDQMPYRNT-ISSNVMISGYLKEGKLSIAKEIFDSMVER-NAVTYTLLIGGYSK 116
SE L ++ Y +T N ++S Y K LS A+ +FD E+ +AV + ++ YS
Sbjct: 165 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 224
Query: 117 SDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG-HDSAVI 175
S + +E +LF M +G P+ T V+ L+ C+ K ++H+ V+K H S +
Sbjct: 225 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 284
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
+CN+LI Y + + A ++ ++M D VT+N+LI GY KEA++ F +M G
Sbjct: 285 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 344
Query: 236 FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEAR 295
++ + + +++ A L ++ G ++H Y +K N+ VGN L+D YSK +
Sbjct: 345 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG 404
Query: 296 KLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
+ F +M + D +S+ +I YA E++ LFR + + + ++L ++ +
Sbjct: 405 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 464
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
+ + +++H I+ + ++ N LVD+Y KCR A R+F + + V WT+MIS
Sbjct: 465 SMLIVKEIHCH-ILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMIS 523
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
++ NG+ E+++LF M ++AD +L A+A+L++++ G+++H Y++R GF
Sbjct: 524 SSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL 583
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV 535
A+VDMYA CG L+ A +F + + ++ + ++I+AY +G G+A ++LF++M
Sbjct: 584 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 643
Query: 536 LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKF 595
PD +SFL + ACSH GL++EG + M Y+L P EHY +VD+L R+
Sbjct: 644 HENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 703
Query: 596 DKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNI 655
+A + + M +P +W ++L +CR H +++ + AA++L +E ++ V +SN+
Sbjct: 704 VEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEP-KNPGNLVLVSNV 762
Query: 656 LAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDIL 715
AE G+W V KV+ M+ G+ K P SW+E+ KVH F A DK+HP+ KEI K+ +
Sbjct: 763 FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 822
Query: 716 SEQMEKE-GYVPDTSCALHNEDEDIKVESLKYHSERLAIAFA 756
+ ++E+E GYV DT LHN DE KV+ L HSER+AIA+
Sbjct: 823 TRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 864
Score = 232 bits (592), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 258/496 (52%), Gaps = 3/496 (0%)
Query: 56 GQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYS 115
G L+EA + D + + + + + + +++FD M +R A + +IG Y
Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYV 121
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVI 175
+ + A L+ M G +F LL C + I+ ++HS +VKLG+ S
Sbjct: 122 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 181
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQR-DSVTYNALIAGYANEGFNKEAIKLFMEMRDL 234
I N+L+ Y K + A +L+ ++ D+V +N++++ Y+ G + E ++LF EM
Sbjct: 182 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 241
Query: 235 GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK-TTLIWNVFVGNALLDFYSKHDCLVE 293
G + +T + L A G G++IH +K +T ++V NAL+ Y++ + +
Sbjct: 242 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 301
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
A ++ +M D V++N +I Y + KE++ F + + ++++ +
Sbjct: 302 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 361
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
+ +L G +LH+ I DS + V N L+DMY+KC R F+++ + + WT +
Sbjct: 362 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 421
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
I+ QN E+L+LF ++ + + D+ S+L+AS+ L S+ + K++H +I+R G
Sbjct: 422 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 481
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEE 533
+ ++ + LVD+Y KC ++ A ++F+ + ++VVSW ++IS+ A NG+ ++LF
Sbjct: 482 LDTVIQ-NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 540
Query: 534 MVLLGYQPDSVSFLCV 549
MV G DSV+ LC+
Sbjct: 541 MVETGLSADSVALLCI 556
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 146/280 (52%), Gaps = 19/280 (6%)
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
RR E++F ++ R W MI A V NG +L L+ MR + V ++F ++L
Sbjct: 93 RRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 152
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NV 508
KA A L I G +LHS +++ G+ S+ + +ALV MYAK L A ++F E+ +
Sbjct: 153 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 212
Query: 509 VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNS 568
V WN+++S+Y+++G TL+LF EM + G P+S + + TAC +G Y
Sbjct: 213 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC-------DGFSYAKL 265
Query: 569 MTKVYKLVPKREHYAS-------IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
+++ V K ++S ++ + R GK +AE+++ +M + D + W+S++
Sbjct: 266 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG- 323
Query: 622 RIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
+ + K A E +M + V+M++I+A +G+
Sbjct: 324 --YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 361
>AT2G33680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14249608-14251791 FORWARD
Length = 727
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 394/719 (54%), Gaps = 12/719 (1%)
Query: 35 KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTIS----SNVMISGYLKEGKLS 90
+T +P TS ++ Q L R + Q+ + +NV+++ Y K GKL+
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAF---KLFVRMCRSGTKPDYVTFVTLLS 147
A IF++++ ++ V++ LI GYS++ ++ +LF M P+ T +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
+ + Q H+ VVK+ + + SL+ YCK V+ +++ MP+R++ T
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 208 YNALIAGYANEGFNKEAIK---LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
++ +++GYA G +EAIK LF+ ++ G + SD+ F AVL + + G+QIH
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHC 245
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
+K L+ V + NAL+ YSK + L EA K+F + + ++++ M+T Y+ G E
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
++ LF ++ + +L+ +++ L+ G+QLHS + + + ALVD
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVD 365
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
MYAK +A + F L R WT++IS VQN EE+L L+ M+ + + T
Sbjct: 366 MYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
ASVLKA ++LA++ LGKQ+H + I+ GF + GSAL MY+KCGSL+D +F+ P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 505 ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLR 564
++VVSWNA+IS + NG G+ L+LFEEM+ G +PD V+F+ + +ACSH G VE G
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWF 545
Query: 565 YFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
YFN M+ L PK +HYA +VD+L R+G+ +A++ I D +W +L++C+ H
Sbjct: 546 YFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNH 605
Query: 625 KNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYS 684
+L A E+L + R+++ YV +S I G+ V +V K MR G++K S
Sbjct: 606 GKCELGVYAGEKLMALGS-RESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCS 664
Query: 685 WVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVES 743
W+E+K++ H+F D HP ++E + ++S QM +EG+V + E+E ++ +
Sbjct: 665 WIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEEEEGTQLST 723
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/591 (36%), Positives = 337/591 (57%), Gaps = 34/591 (5%)
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
+ +H + VK ++ + N L++ Y K A ++F +MP D +++ ++TA
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 319 TGLIKESINLFRKLQFTKYDR-RNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
L +++++F + + R +F F+ ++ AN+ + GRQ+H IV+ ++ +
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLF------- 430
V ++LVDMYAKC A+ +F + + T+ WTAM+S ++G EE+L+LF
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 431 ------------------------SEMRRDNV-TADQATFASVLKASANLASISLGKQLH 465
+EMRR+ V D +S++ A ANLA+ G+Q+H
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH 261
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
+I GF S ++ +AL+DMYAKC + A IF M R+VVSW +LI A +G E
Sbjct: 262 GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 321
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
L L+++MV G +P+ V+F+ + ACSH G VE+G F SMTK Y + P +HY +
Sbjct: 322 KALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD 645
+D+L RSG D+AE LI MPF PDE W+++L++C+ + R A+ L + L+D
Sbjct: 382 LDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKD 441
Query: 646 AAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQM 705
+ Y+ +SNI A A W V + ++ + E + K P +S VE++ + +F A + +HP
Sbjct: 442 PSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLK 501
Query: 706 KEIILKIDILSEQME-KEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGS 764
++I + L E+M + GYVPDTS LH+ DE K + L +HSER A+A+ L+ G+
Sbjct: 502 EDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGT 561
Query: 765 PILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
PI ++KNLR C DCH +K IS+I REI VRD++R+HHFK G CSC D+W
Sbjct: 562 PIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 218/471 (46%), Gaps = 41/471 (8%)
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
P Y+ + L C + + +H+H+VKLG + N+L++ Y K A Q+
Sbjct: 4 PHYLHQLQL---CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG-FETSDFTFQAVLYAGIGLDD 255
+ EMP RD + + +++ + + + +F + DF F A++ A L
Sbjct: 61 FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
I G+Q+H + + + + V ++L+D Y+K L A+ +F + + +S+ M++
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSG 180
Query: 316 YAWTGLIKESINLFRKLQ--------------------------FTKYDRRN------FP 343
YA +G +E++ LFR L FT+ R
Sbjct: 181 YAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLV 240
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
++++ AN+ GRQ+H I DS V ++NAL+DMYAKC A+ IF ++
Sbjct: 241 LSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR 300
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
R V WT++I Q+G E++L L+ +M V ++ TF ++ A +++ + G++
Sbjct: 301 HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRE 360
Query: 464 LHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASN 521
L + + G S+ + L+D+ + G L +A + MP + +W AL+SA
Sbjct: 361 LFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQ 420
Query: 522 GDGEATLKLFEEMVLLGYQPDSVSFLC---VFTACSHWGLVEEGLRYFNSM 569
G G+ +++ + +V D +++ ++ + S WG V E R M
Sbjct: 421 GRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 129/255 (50%), Gaps = 10/255 (3%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
+ G L+ A+ +FD + +NTIS M+SGY K G+ A E+F + +N ++T LI G
Sbjct: 152 KCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKP-DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDS 172
+ +S + +EAF +F M R D + +++ C + QVH V+ LG DS
Sbjct: 212 FVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDS 271
Query: 173 AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
V I N+LID Y K V A ++ M RD V++ +LI G A G ++A+ L+ +M
Sbjct: 272 CVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV 331
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQI-----HGYAVKTTLIWNVFVGNALLDFYSK 287
G + ++ TF ++YA + + G+++ Y ++ +L LLD +
Sbjct: 332 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY----TCLLDLLGR 387
Query: 288 HDCLVEARKLFYKMP 302
L EA L + MP
Sbjct: 388 SGLLDEAENLIHTMP 402
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 191/420 (45%), Gaps = 43/420 (10%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
+N +++ Y K G S A ++FD M R+ + + ++ ++++ + +F + S
Sbjct: 41 ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSG 100
Query: 136 -KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
+PD F L+ C + I QVH H + + + ++ +SL+D Y K ++ A
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF--MEMRDL--------GFETSDFTFQ 244
++ + ++++++ A+++GYA G +EA++LF + +++L GF S +
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 245 A------------------VLYAGIG----LDDIAFGQQIHGYAVKTTLIWNVFVGNALL 282
A VL + +G L G+Q+HG + VF+ NAL+
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 283 DFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNF 342
D Y+K ++ A+ +F +M D VS+ +I A G ++++ L+ +
Sbjct: 281 DMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340
Query: 343 PFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA----NALVDMYAKCRRPEEAERI 398
F ++ +++ ++ GR+L T D + + L+D+ + +EAE +
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQS---MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397
Query: 399 FVKLSSRCTVP-WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA--SVLKASANL 455
+ P W A++SA + G + +++ + D +T+ S + ASA+L
Sbjct: 398 IHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 110/229 (48%), Gaps = 8/229 (3%)
Query: 449 LKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV 508
L+ A +++ K LH++I++ G + + LV++Y KCG+ A+Q+F EMP R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 509 VSWNALISAY-ASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFN 567
++W ++++A +N G+ G +PD F + AC++ G ++ G R +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG-RQVH 128
Query: 568 SMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ 627
V + +S+VD+ + G + A+ + + + I W+++++ +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSG----YAK 183
Query: 628 DLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ-WESVGKVKKAMRER 675
K A +LF + +++ + + + ++G+ E+ + RER
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/463 (40%), Positives = 294/463 (63%), Gaps = 2/463 (0%)
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
M D+++G +HS I + S + V N+L+ +YA C A ++F K+ + V W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
I+ +NG EE+L L++EM + D T S+L A A + +++LGK++H Y+I+ G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEE 533
++++ + L+D+YA+CG +++A +F EM ++N VSW +LI A NG G+ ++LF+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 534 M-VLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRS 592
M G P ++F+ + ACSH G+V+EG YF M + YK+ P+ EH+ +VD+L R+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 593 GKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM 652
G+ KA + I MP P+ ++W ++L +C +H + DLA+ A Q+ +E + YV +
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEP-NHSGDYVLL 299
Query: 653 SNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKI 712
SN+ A +W V K++K M G+ KVP +S VE+ ++VH F DK+HPQ I K+
Sbjct: 300 SNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 359
Query: 713 DILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNL 772
++ ++ EGYVP S + +E+ K ++ YHSE++AIAF LISTPE SPI V+KNL
Sbjct: 360 KEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNL 419
Query: 773 RACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
R C DCH AIK++SK+ REI VRD SRFHHFK+G CSC+DYW
Sbjct: 420 RVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 149/297 (50%), Gaps = 13/297 (4%)
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
+ D+ G+ IH +++ ++V N+LL Y+ + A K+F KMPE D V++N +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
I +A G +E++ L+ ++ F ++LS A + L +G+++H I
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
+ +N L+D+YA+C R EEA+ +F ++ + +V WT++I NG +E+++LF
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 433 MRR-DNVTADQATFASVLKASANLASISLG-----KQLHSYIIRSGFMSSIYAGSALVDM 486
M + + + TF +L A ++ + G + Y I I +VD+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE----PRIEHFGCMVDL 236
Query: 487 YAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
A+ G +K A + K MP + NVV W L+ A +GD + L F + +L +P+
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 104/178 (58%), Gaps = 4/178 (2%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS--QLYKEMPQRDSVTYNALIAGYANE 218
+HS V++ G S + + NSL+ Y +C D+AS +++ +MP++D V +N++I G+A
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYA--NCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 219 GFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVG 278
G +EA+ L+ EM G + FT ++L A + + G+++H Y +K L N+
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 279 NALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK 336
N LLD Y++ + EA+ LF +M + + VS+ +I A G KE+I LF+ ++ T+
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N ++ Y G ++ A ++FD M E++ V + +I G++++ + EA L+ M G K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
PD T V+LLS C + +VH +++K+G + N L+D Y + V+ A L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDL-GFETSDFTFQAVLYA 249
+ EM ++SV++ +LI G A GF KEAI+LF M G + TF +LYA
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
RN SSNV++ Y + G++ AK +FD MV++N+V++T LI G + + EA +LF M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 131 -CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQ 160
G P +TFV +L C+ M+K F+
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/563 (36%), Positives = 324/563 (57%), Gaps = 4/563 (0%)
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
I + +H VK+ + F+G+ L+ Y + V A KLF +MPE D VS+N +I+
Sbjct: 47 IELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISG 106
Query: 316 YAWTGLIKESINLFRKLQFTKYDRR--NFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
Y+ G + + + ++ ++ R F +M+S + GR +H +
Sbjct: 107 YSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVL 166
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
EV V NA ++ Y K + ++F LS + V W MI ++QNG E+ L F+
Sbjct: 167 EEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMS 226
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
RR DQATF +VL++ ++ + L + +H I+ GF + +AL+D+Y+K G L
Sbjct: 227 RRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRL 286
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+D+ +F E+ + ++W A+++AYA++G G +K FE MV G PD V+F + AC
Sbjct: 287 EDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNAC 346
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIM 613
SH GLVEEG YF +M+K Y++ P+ +HY+ +VD+L RSG A LI EMP +P +
Sbjct: 347 SHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGV 406
Query: 614 WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
W ++L +CR++K+ L +AAE+LF +E RD YV +SNI + +G W+ +++ M+
Sbjct: 407 WGALLGACRVYKDTQLGTKAAERLFELEP-RDGRNYVMLSNIYSASGLWKDASRIRNLMK 465
Query: 674 ERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKE-GYVPDTSCAL 732
++GL + S++E +K+H F D +HP+ ++I K+ + ++M+ E GY T L
Sbjct: 466 QKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVL 525
Query: 733 HNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGRE 792
H+ ED+K E + HSE++A+AF L+ PI++ KNLR C DCH K IS I R
Sbjct: 526 HDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRR 585
Query: 793 ITVRDSSRFHHFKDGICSCRDYW 815
I +RDS RFHHF DG CSC DYW
Sbjct: 586 IIIRDSKRFHHFLDGSCSCSDYW 608
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 203/416 (48%), Gaps = 7/416 (1%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
+H VVK I + L+ Y ++ A +L+ EMP+RD V++N+LI+GY+ G+
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 221 NKEAIKLF--MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVG 278
+ ++ M + ++GF ++ TF +++ A + G+ IHG +K ++ V V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 279 NALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYD 338
NA +++Y K L + KLF + + VS+N MI + GL ++ + F + ++
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
F +L +M +++ + +H + + AL+D+Y+K R E++ +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 399 FVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASI 458
F +++S ++ WTAM++A +G +++K F M ++ D TF +L A ++ +
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 459 SLGKQ-LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALIS 516
GK + R + S +VD+ + G L+DA + KEMP E + W AL+
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 517 AYASNGDGEATLKLFEEMVLLGYQP-DSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
A D + K E + L +P D +++ + S GL ++ R N M +
Sbjct: 413 ACRVYKDTQLGTKAAERLFEL--EPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQ 466
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 135/264 (51%), Gaps = 2/264 (0%)
Query: 68 MPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLF 127
+ YR+ + ++ YL+ G A+++FD M ER+ V++ LI GYS + F++
Sbjct: 61 VSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVL 120
Query: 128 VRMCRS--GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYC 185
RM S G +P+ VTF++++S C + +H V+K G V + N+ I+ Y
Sbjct: 121 SRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYG 180
Query: 186 KMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQA 245
K + + +L++++ ++ V++N +I + G ++ + F R +G E TF A
Sbjct: 181 KTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLA 240
Query: 246 VLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELD 305
VL + + + Q IHG + N + ALLD YSK L ++ +F+++ D
Sbjct: 241 VLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPD 300
Query: 306 GVSYNMMITAYAWTGLIKESINLF 329
+++ M+ AYA G +++I F
Sbjct: 301 SMAWTAMLAAYATHGFGRDAIKHF 324
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 155/338 (45%), Gaps = 14/338 (4%)
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
+++++ + + +++ R LH + + + + + + LV Y + AE++F ++
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT--ADQATFASVLKASANLASISLGK 462
R V W ++IS G+ + ++ S M V ++ TF S++ A S G+
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 463 QLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNG 522
+H +++ G + + +A ++ Y K G L + ++F+++ +N+VSWN +I + NG
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 523 DGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVE-----EGLRYFNSMTKVYKLVP 577
E L F +G++PD +FL V +C G+V GL F + +
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT- 273
Query: 578 KREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQL 637
+++D+ + G+ + + + E+ PD + W+++L + H A + E +
Sbjct: 274 -----TALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Query: 638 FNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
+ + D + + N + +G E + M +R
Sbjct: 328 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR 365
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 10/244 (4%)
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
A +S++ A + SI L + LH +++S + G LV Y + G A ++F E
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 503 MPERNVVSWNALISAYASNGDGEATLKLFEEMVL--LGYQPDSVSFLCVFTACSHWGLVE 560
MPER++VSWN+LIS Y+ G ++ M++ +G++P+ V+FL + +AC + G E
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 561 EGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
EG R + + + ++ + + + ++ ++G + KL ++ + + W++++
Sbjct: 152 EG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI-KNLVSWNTMIV- 208
Query: 621 CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKV 680
IH LA++ FNM R + LA E +G V+ A GL
Sbjct: 209 --IHLQNGLAEKGL-AYFNMS--RRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 681 PAYS 684
+S
Sbjct: 264 GGFS 267
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISS----NVMISGYLKEGK 88
I + GF P+ I V G E R + + + N I+ Y K G
Sbjct: 125 ISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGD 184
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L+ + ++F+ + +N V++ +I + ++ + F R G +PD TF+ +L
Sbjct: 185 LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRS 244
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C D +++ +H ++ G I +L+D Y K+ ++ +S ++ E+ DS+ +
Sbjct: 245 CEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAW 304
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
A++A YA GF ++AIK F M G TF +L A
Sbjct: 305 TAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNA 345
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/559 (37%), Positives = 324/559 (57%), Gaps = 6/559 (1%)
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSK---HDCLVEARKLFYKMPELDGVSYNMMITAYA 317
QI YA+K+ + FV L++F ++ + AR LF M E D V +N M Y+
Sbjct: 47 QIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
E +LF ++ N+ F ++L A L+ GRQLH ++ D V
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
V L++MY +C + A +F ++ C V + AMI+ + E+L LF EM+
Sbjct: 166 VCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
+ ++ T SVL + A L S+ LGK +H Y + F + +AL+DM+AKCGSL DA+
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 498 QIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWG 557
IF++M ++ +W+A+I AYA++G E ++ +FE M QPD ++FL + ACSH G
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 558 LVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSI 617
VEEG +YF+ M + +VP +HY S+VD+L R+G + A + I ++P P ++W +
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 618 LNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
L +C H N DLA++ +E++F ++ YV +SN+ A +WE V ++K M++R
Sbjct: 406 LAACSSHNNLDLAEKVSERIFELDD-SHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 678 TKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALH-NED 736
KVP S +E+ + VH F + D ++ +D + ++++ GYVPDTS +H N +
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 737 EDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVR 796
+ K +L+YHSE+LAI F L++TP G+ I V+KNLR C DCH A K+IS I GR++ +R
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 584
Query: 797 DSSRFHHFKDGICSCRDYW 815
D RFHHF+DG CSC D+W
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 221/440 (50%), Gaps = 20/440 (4%)
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD----LASQLYK 198
+ L+S CN ++ L Q+ ++ +K H V LI+ +C + A L++
Sbjct: 33 ILLISKCNS---LRELMQIQAYAIK-SHIEDVSFVAKLIN-FCTESPTESSMSYARHLFE 87
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
M + D V +N++ GY+ E LF+E+ + G ++TF ++L A +
Sbjct: 88 AMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEE 147
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G+Q+H ++K L NV+V L++ Y++ + + AR +F ++ E V YN MIT YA
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
E+++LFR++Q ++LS A + L +G+ +H A + V V
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKV 267
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
AL+DM+AKC ++A IF K+ + T W+AMI A +G E+S+ +F MR +NV
Sbjct: 268 NTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV 327
Query: 439 TADQATFASVLKASANLASISLGKQLHSYII-RSGFMSSIYAGSALVDMYAKCGSLKDAI 497
D+ TF +L A ++ + G++ S ++ + G + SI ++VD+ ++ G+L+DA
Sbjct: 328 QPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Query: 498 QIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLL--GYQPDSVSFLCVFTACS 554
+ ++P + W L++A +S+ + + K+ E + L + D V ++
Sbjct: 388 EFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNK 447
Query: 555 HWGLVEEGLRYFNSMTKVYK 574
W Y +S+ KV K
Sbjct: 448 KW-------EYVDSLRKVMK 460
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 166/333 (49%), Gaps = 2/333 (0%)
Query: 86 EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
E +S A+ +F++M E + V + + GYS+ +E F LFV + G PD TF +L
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
L C K ++ Q+H +KLG D V +C +LI+ Y + VD A ++ + +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGY 265
V YNA+I GYA EA+ LF EM+ + ++ T +VL + L + G+ IH Y
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKES 325
A K + V V AL+D ++K L +A +F KM D +++ MI AYA G ++S
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 326 INLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD-SEVLVANALVD 384
+ +F +++ F +L+ ++ ++ GR+ SQ + + ++VD
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 385 MYAKCRRPEEAERIFVKLS-SRCTVPWTAMISA 416
+ ++ E+A KL S + W +++A
Sbjct: 376 LLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 78 VMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKP 137
+I+ Y + + A+ +FD +VE V Y +I GY++ ++ EA LF M KP
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
+ +T +++LS C + +H + K V + +LID + K +D A ++
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
++M +D+ ++A+I YAN G ++++ +F MR + + TF +L A +
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 258 FGQQIHGYAV-KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
G++ V K ++ ++ +++D S+ L +A + K+P
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLP 394
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/600 (34%), Positives = 345/600 (57%), Gaps = 8/600 (1%)
Query: 222 KEAIKLF--MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
+EA +LF +E+R F+ T+ A++ A I L I ++++G+ + ++ N
Sbjct: 104 REAFELFEILEIR-CSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 162
Query: 280 ALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR 339
+L + K +++AR+LF ++PE + SY +I+ + G E+ LF+ + D
Sbjct: 163 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 222
Query: 340 RNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF 399
FA ML +A + + +G+QLH A+ V+ L+DMY+KC E+A F
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 400 VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
+ + TV W +I+ +G+ EE+L L +MR V+ DQ T + +++ S LA +
Sbjct: 283 ECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 342
Query: 460 LGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYA 519
L KQ H+ +IR+GF S I A +ALVD Y+K G + A +F ++P +N++SWNAL+ YA
Sbjct: 343 LTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYA 402
Query: 520 SNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR 579
++G G +KLFE+M+ P+ V+FL V +AC++ GL E+G F SM++V+ + P+
Sbjct: 403 NHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRA 462
Query: 580 EHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFN 639
HYA ++++L R G D+A I P MW+++LN+CR+ +N +L + AE+L+
Sbjct: 463 MHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYG 522
Query: 640 MEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCAND 699
M YV M N+ G+ V + + +GL+ +PA +WVE+ + H F + D
Sbjct: 523 MGP-EKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGD 581
Query: 700 K----NHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAF 755
+ N ++I K+D L E++ + GY + L + DE + +YHSE+LAIA+
Sbjct: 582 RFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAY 641
Query: 756 ALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
L++TPE +P+ + +N R C +CH ++ IS + GRE+ VRD+SRFHHFK+G CSC YW
Sbjct: 642 GLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 210/424 (49%), Gaps = 3/424 (0%)
Query: 97 DSMVERNAVTYTLLIGGYSKSDQFIEAFKLF-VRMCRSGTKPDYVTFVTLLSGCNDPKMI 155
D+ + ++ VT I ++F EAF+LF + R K T+ L+ C K I
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 156 KGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGY 215
+ + +V+ ++ G + + N ++ + K + A +L+ E+P+R+ +Y ++I+G+
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 216 ANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNV 275
N G EA +LF M + + TF +L A GL I G+Q+H A+K ++ N
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNT 259
Query: 276 FVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFT 335
FV L+D YSK + +AR F MPE V++N +I YA G +E++ L ++ +
Sbjct: 260 FVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDS 319
Query: 336 KYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEA 395
F + M+ ++ + L++ +Q H+ I +SE++ ALVD Y+K R + A
Sbjct: 320 GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 396 ERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
+F KL + + W A++ +G +++KLF +M NV + TF +VL A A
Sbjct: 380 RYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYS 439
Query: 456 ASISLGKQLH-SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS-WNA 513
G ++ S G + ++++ + G L +AI + P + V+ W A
Sbjct: 440 GLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAA 499
Query: 514 LISA 517
L++A
Sbjct: 500 LLNA 503
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 135/276 (48%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N ++ ++K G + A+ +FD + ERN +Y +I G+ ++EAF+LF M +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+ TF +L I Q+H +KLG + LID Y K ++ A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
++ MP++ +V +N +IAGYA G+++EA+ L +MRD G FT ++ L +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
+Q H ++ + AL+DFYSK + AR +F K+P + +S+N ++ Y
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
A G +++ LF K+ + F +LS A
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 50 MDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
++L + S R F+ +++ ++ Y K G++ A+ +FD + +N +++
Sbjct: 341 LELTKQAHASLIRNGFES----EIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNA 396
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGC 149
L+GGY+ + +A KLF +M + P++VTF+ +LS C
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
>AT3G02330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:473881-476592 REVERSE
Length = 861
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/670 (31%), Positives = 367/670 (54%), Gaps = 23/670 (3%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ ++++ ++ Y K + + +F + E+N+V+++ +I G +++ A K F M
Sbjct: 172 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 231
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
+ + ++L C ++ Q+H+H +K + I+ + +D Y K +
Sbjct: 232 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 291
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A L+ + +YNA+I GY+ E +A+ LF + G + + V A
Sbjct: 292 DAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACA 351
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
+ ++ G QI+G A+K++L +V V NA +D Y K L EA ++F +M D VS+N
Sbjct: 352 LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 411
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
+I A+ G E++ LF + ++ + F F ++L A L G ++HS + +
Sbjct: 412 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK-ACTGGSLGYGMEIHSSIVKSG 470
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP--------------------WT 411
S V +L+DMY+KC EEAE+I + R V W
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 530
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
++IS V E++ LF+ M +T D+ T+A+VL ANLAS LGKQ+H+ +I+
Sbjct: 531 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK 590
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
S +Y S LVDMY+KCG L D+ +F++ R+ V+WNA+I YA +G GE ++LF
Sbjct: 591 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 650
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCR 591
E M+L +P+ V+F+ + AC+H GL+++GL YF M + Y L P+ HY+++VD+L +
Sbjct: 651 ERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGK 710
Query: 592 SGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ-DLAKRAAEQLFNMEVLRDAAPYV 650
SGK +A +LI EMPF+ D+++W ++L C IH+N ++A+ A L ++ +D++ Y
Sbjct: 711 SGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP-QDSSAYT 769
Query: 651 TMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIIL 710
+SN+ A+AG WE V +++ MR L K P SWVE+K ++H+F DK HP+ +EI
Sbjct: 770 LLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYE 829
Query: 711 KIDILSEQME 720
++ ++ +M+
Sbjct: 830 ELGLIYSEMK 839
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 200/689 (29%), Positives = 345/689 (50%), Gaps = 51/689 (7%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLS 90
A ++ +GF P+T N + + A +FD+MP R+ +S N MI+GY K +
Sbjct: 30 AHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMF 89
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
A F+ M R+ V++ ++ GY ++ + +++ ++FV M R G + D TF +L C+
Sbjct: 90 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 149
Query: 151 DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNA 210
+ Q+H VV++G D+ V+ ++L+D Y K + ++++ +P+++SV+++A
Sbjct: 150 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 209
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT 270
+IAG A+K F EM+ + S + +VL + L ++ G Q+H +A+K+
Sbjct: 210 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 269
Query: 271 LIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFR 330
+ V A LD Y+K D + +A+ LF L+ SYN MIT Y+ +++ LF
Sbjct: 270 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 329
Query: 331 KLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCR 390
+L + + + A + L G Q++ AI ++ +V VANA +DMY KC+
Sbjct: 330 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 389
Query: 391 RPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLK 450
EA R+F ++ R V W A+I+A+ QNG E+L LF M R + D+ TF S+LK
Sbjct: 390 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 449
Query: 451 ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NV- 508
A S+ G ++HS I++SG S+ G +L+DMY+KCG +++A +I +R NV
Sbjct: 450 ACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 508
Query: 509 ------------------VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
VSWN++IS Y E LF M+ +G PD ++ V
Sbjct: 509 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 568
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHY------ASIVDVLCRSGKFDKAEKLIAE 604
C++ L GL +++ V K+E +++VD+ + G + +L+ E
Sbjct: 569 DTCAN--LASAGLG-----KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFE 620
Query: 605 MPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAP-YVTMSNILAEAGQWE 663
D + W++++ H + A QLF +L + P +VT +IL
Sbjct: 621 KSLRRDFVTWNAMICGYAHHGKGE----EAIQLFERMILENIKPNHVTFISILRACAH-- 674
Query: 664 SVGKVKKAM-------RERGL-TKVPAYS 684
+G + K + R+ GL ++P YS
Sbjct: 675 -MGLIDKGLEYFYMMKRDYGLDPQLPHYS 702
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 39/203 (19%)
Query: 453 ANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWN 512
A ++ LGKQ H+++I SGF + + + L+ +Y A +F +MP R+VVSWN
Sbjct: 17 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 76
Query: 513 ALI-------------------------------SAYASNGDGEATLKLFEEMVLLGYQP 541
+I S Y NG+ ++++F +M G +
Sbjct: 77 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 136
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKV---YKLVPKREHYASIVDVLCRSGKFDKA 598
D +F + CS G++ + +V +V ++++D+ + +F ++
Sbjct: 137 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAA----SALLDMYAKGKRFVES 192
Query: 599 EKLIAEMPFDPDEIMWSSILNSC 621
++ +P + + + WS+I+ C
Sbjct: 193 LRVFQGIP-EKNSVSWSAIIAGC 214
>AT1G71420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26917822-26920059 REVERSE
Length = 745
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 235/696 (33%), Positives = 395/696 (56%), Gaps = 34/696 (4%)
Query: 142 FVTLLSGCNDPKMIKGLFQVHSHVVK--LGHDSAVIICNSLIDSYCKMHCVDLASQLYKE 199
+ L C + + + +H H++ + VI+ N LI+ Y K + A Q++
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 200 MPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFG 259
MP+R+ V++ ALI GY G +E LF M F ++FT +VL + G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSC----RYEPG 176
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSK-HD--CLVEARKLFYKMPELDGVSYNMMITAY 316
+Q+HG A+K L +++V NA++ Y + HD EA +F + + V++N MI A+
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML---DL------QMGRQLHSQA 367
L K++I +F ++ D F AT+L++ +++ DL + QLHS
Sbjct: 237 QCCNLGKKAIGVFMRMH---SDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 368 IVTTADSEVLVANALVDMYAKCRRP-EEAERIFVKLS-SRCTVPWTAMISANVQNGHFEE 425
+ + ++ VA AL+ +Y++ + ++F+++S R V W +I+A E
Sbjct: 294 VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ER 352
Query: 426 SLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVD 485
++ LF ++R++ ++ D TF+SVLKA A L + +H+ +I+ GF++ ++L+
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIH 412
Query: 486 MYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
YAKCGSL +++F +M R+VVSWN+++ AY+ +G ++ L +F++M + PDS +
Sbjct: 413 AYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDI---NPDSAT 469
Query: 546 FLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
F+ + +ACSH G VEEGLR F SM + + +P+ HYA ++D+L R+ +F +AE++I +M
Sbjct: 470 FIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Query: 606 PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV 665
P DPD ++W ++L SCR H N L K AA++L + ++ Y+ MSNI G +
Sbjct: 530 PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEA 589
Query: 666 GKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYV 725
K M + K P SW EI +KVH F + ++ P + + ++ L +++ GYV
Sbjct: 590 NLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYV 649
Query: 726 PDT-SCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSP-----ILVMKNLRACTDCH 779
P+ S + EDE+ + ++L +HSE+LA+AFA++ + S I +MKN R C DCH
Sbjct: 650 PEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCH 709
Query: 780 AAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+K+ SK++G+EI +RDS+RFHHFKD CSC DYW
Sbjct: 710 NFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 244/495 (49%), Gaps = 44/495 (8%)
Query: 59 SEARELFDQM---------PY---RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVT 106
+E R L D + PY +N I +N +I+ Y K G + A+++FD+M ERN V+
Sbjct: 70 AEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVS 129
Query: 107 YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN-DPKMIKGLFQVHSHV 165
+T LI GY ++ E F LF M S P+ T ++L+ C +P QVH
Sbjct: 130 WTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRYEPGK-----QVHGLA 183
Query: 166 VKLGHDSAVIICNSLIDSYCKMHCVDLASQ---LYKEMPQRDSVTYNALIAGYANEGFNK 222
+KLG ++ + N++I Y + H A + +++ + ++ VT+N++IA + K
Sbjct: 184 LKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGK 243
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ------QIHGYAVKTTLIWNVF 276
+AI +FM M G T + + D+ + Q+H VK+ L+
Sbjct: 244 KAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTE 303
Query: 277 VGNALLDFYSKH-DCLVEARKLFYKMPEL-DGVSYNMMITAYAWTGLIKESINLFRKLQF 334
V AL+ YS+ + + KLF +M D V++N +ITA+A + +I+LF +L+
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQ 362
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
K + F+++L A ++ + +H+Q I ++ ++ N+L+ YAKC +
Sbjct: 363 EKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDL 422
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASAN 454
R+F + SR V W +M+ A +G + L +F +M ++ D ATF ++L A ++
Sbjct: 423 CMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSH 479
Query: 455 LASISLGKQLHSYIIRSGF-----MSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNV 508
+ G + I RS F + + + ++DM ++ +A ++ K+MP + +
Sbjct: 480 AGRVEEGLR----IFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 509 VSWNALISAYASNGD 523
V W AL+ + +G+
Sbjct: 536 VVWIALLGSCRKHGN 550
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/543 (36%), Positives = 321/543 (59%), Gaps = 2/543 (0%)
Query: 274 NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
N N L++ Y + LV ARK+F +MP+ ++N MI +E ++LFR++
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 334 FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
+ + ++ S +A + + +G+Q+H I + +++V ++L MY + + +
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 394 EAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASA 453
+ E + + R V W +I N QNG E L L+ M+ ++ TF +VL + +
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 454 NLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNA 513
+LA G+Q+H+ I+ G S + S+L+ MY+KCG L DA + F E + + V W++
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 514 LISAYASNGDGEATLKLFEEMV-LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
+ISAY +G G+ ++LF M + + V+FL + ACSH GL ++GL F+ M +
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
Y P +HY +VD+L R+G D+AE +I MP D ++W ++L++C IHKN ++A+R
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 633 AAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKV 692
+++ ++ D+A YV ++N+ A A +W V +V+K+MR++ + K SW E K +V
Sbjct: 384 VFKEILQIDP-NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEV 442
Query: 693 HIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLA 752
H F D++ + KEI + L+ +M+ +GY PDT+ LH+ DE+ K L HSE+LA
Sbjct: 443 HQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLA 502
Query: 753 IAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCR 812
+AFAL+ PEG+PI ++KNLR C+DCH A K IS I REIT+RD SRFHHF +G CSC
Sbjct: 503 VAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCG 562
Query: 813 DYW 815
DYW
Sbjct: 563 DYW 565
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 192/361 (53%), Gaps = 3/361 (0%)
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
N LI+ Y + + A +++ EMP R T+NA+IAG FN+E + LF EM LGF
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
++T +V GL ++ GQQIHGY +K L ++ V ++L Y ++ L + +
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
MP + V++N +I A G + + L++ ++ + F T+LS +++
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISAN 417
G+Q+H++AI A S V V ++L+ MY+KC +A + F + V W++MISA
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 418 VQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQLHSYII-RSGFMS 475
+G +E+++LF+ M + N+ ++ F ++L A ++ G +L ++ + GF
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEM 534
+ + +VD+ + G L A I + MP + ++V W L+SA + + E ++F+E+
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Query: 535 V 535
+
Sbjct: 389 L 389
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 220/514 (42%), Gaps = 57/514 (11%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
+ G A ++ +M +N +SSN++I+GY++ G L A+++FD M +R T+ +I G
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
+ + E LF M G PD T ++ SG + + Q+H + +K G +
Sbjct: 66 LIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD 125
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
+++ +SL Y + + + + MP R+ V +N LI G A G + + L+ M+
Sbjct: 126 LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKI 185
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
G + TF VL + L GQQIH A+K V V ++L+ YSK CL +
Sbjct: 186 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGD 245
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL-QFTKYDRRNFPFATMLSLAA 352
A K F + + D V ++ MI+AY + G E+I LF + + T + F +L +
Sbjct: 246 AAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACS 305
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVA-NALVDMYAKCRRPEEAERIFVKLSSRC-TVPW 410
+ G +L + L +VD+ + ++AE I + + V W
Sbjct: 306 HSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIW 365
Query: 411 TAMISA-NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
++SA N+ N Q F +L+ N ++ Y++
Sbjct: 366 KTLLSACNIHK----------------NAEMAQRVFKEILQIDPNDSA--------CYVL 401
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV-----VSW---NALISAYASN 521
L +++A +D ++ K M ++NV +SW + +
Sbjct: 402 -------------LANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMG 448
Query: 522 GDGEATLK--------LFEEMVLLGYQPDSVSFL 547
++ K L EM L GY+PD+ S L
Sbjct: 449 DRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVL 482
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 38/295 (12%)
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA-- 440
+ MY+K A ++ ++ + + +I+ V+ G + K+F EM +T
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 441 -----------------------------DQATFASVLKASANLASISLGKQLHSYIIRS 471
D+ T SV SA L S+S+G+Q+H Y I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
G + S+L MY + G L+D + + MP RN+V+WN LI A NG E L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCR 591
+ M + G +P+ ++F+ V ++CS + +G + K+ +S++ + +
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI-GASSVVAVVSSLISMYSK 239
Query: 592 SGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQD----LAKRAAEQLFNMEV 642
G A K +E D DE+MWSS++++ H D L AEQ NME+
Sbjct: 240 CGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT-NMEI 292
>AT4G37380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17572040-17573938 REVERSE
Length = 632
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/564 (35%), Positives = 321/564 (56%), Gaps = 38/564 (6%)
Query: 285 YSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPF 344
Y+ H + + LF++ + D + I + GL ++ L+ +L ++ + F F
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
+++L + + G+ +H+ + + VA LVD+YAK A+++F ++
Sbjct: 134 SSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEM-RRDNVT------------------------ 439
R V TAMI+ + G+ E + LF M RD V+
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 440 -------ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
D+ T + L A + + ++ G+ +H ++ S ++ + L+DMY+KCGS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV-LLGYQPDSVSFLCVFT 551
L++A+ +F + P +++V+WNA+I+ YA +G + L+LF EM + G QP ++F+
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
AC+H GLV EG+R F SM + Y + PK EHY +V +L R+G+ +A + I M D D
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKA 671
++WSS+L SC++H + L K AE L + + +++ YV +SNI A G +E V KV+
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI-KNSGIYVLLSNIYASVGDYEGVAKVRNL 488
Query: 672 MRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCA 731
M+E+G+ K P S +EI++KVH F A D+ H + KEI + +SE+++ GYVP+T+
Sbjct: 489 MKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTV 548
Query: 732 LHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGR 791
L + +E K +SL+ HSERLAIA+ LIST GSP+ + KNLR C+DCH K+ISKI GR
Sbjct: 549 LQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGR 608
Query: 792 EITVRDSSRFHHFKDGICSCRDYW 815
+I +RD +RFHHF DG CSC D+W
Sbjct: 609 KIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 129/222 (58%), Gaps = 10/222 (4%)
Query: 37 GFDPSTSRSNYQIMDL-VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEI 95
G DP + ++D+ + G + A+++FD+MP R+ +SS MI+ Y K+G + A+ +
Sbjct: 158 GIDPYVATG---LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARAL 214
Query: 96 FDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG-TKPDYVTFVTLLSGCNDPKM 154
FDSM ER+ V++ ++I GY++ +A LF ++ G KPD +T V LS C+
Sbjct: 215 FDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGA 274
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAG 214
++ +H V V +C LID Y K ++ A ++ + P++D V +NA+IAG
Sbjct: 275 LETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAG 334
Query: 215 YANEGFNKEAIKLFMEMRDL-GFETSDFTF----QAVLYAGI 251
YA G++++A++LF EM+ + G + +D TF QA +AG+
Sbjct: 335 YAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGL 376
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 188/466 (40%), Gaps = 83/466 (17%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y GK+ + +F ++ + +T I S + +AF L+V++ S P+ TF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLG-------------------------------HD 171
+LL C+ K +H+HV+K G +
Sbjct: 134 SSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
+++ ++I Y K V+ A L+ M +RD V++N +I GYA GF +A+ LF ++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 232 RDLGFETSD-FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDC 290
G D T A L A + + G+ IH + + + NV V L+D YSK
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ-FTKYDRRNFPFATMLS 349
L EA +F P D V++N MI YA G ++++ LF ++Q T + F L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
A+ LV+ E RIF + +
Sbjct: 370 ACAHA--------------------------GLVN---------EGIRIFESMGQEYGIK 394
Query: 410 -----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL 464
+ ++S + G + + + M N+ AD ++SVL + LGK++
Sbjct: 395 PKIEHYGCLVSLLGRAGQLKRAYETIKNM---NMDADSVLWSSVLGSCKLHGDFVLGKEI 451
Query: 465 HSYIIRSGFMSS-IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV 509
Y+I +S IY L ++YA G + ++ M E+ +V
Sbjct: 452 AEYLIGLNIKNSGIYV--LLSNIYASVGDYEGVAKVRNLMKEKGIV 495
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 306/508 (60%), Gaps = 2/508 (0%)
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
+N MI Y +E++ + ++ + NF + +L + ++ G+Q+H Q
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
+++V V N+L++MY +C E + +F KL S+ W++M+SA G + E L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 429 LFSEM-RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMY 487
LF M N+ A+++ S L A AN +++LG +H +++R+ +I ++LVDMY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 488 AKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
KCG L A+ IF++M +RN ++++A+IS A +G+GE+ L++F +M+ G +PD V ++
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 548 CVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPF 607
V ACSH GLV+EG R F M K K+ P EHY +VD+L R+G ++A + I +P
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
Query: 608 DPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGK 667
+ ++++W + L+ CR+ +N +L + AA++L + + Y+ +SN+ ++ W+ V +
Sbjct: 400 EKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSS-HNPGDYLLISNLYSQGQMWDDVAR 458
Query: 668 VKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPD 727
+ + +GL + P +S VE+K K H F + D++HP+ KEI + + Q++ EGY PD
Sbjct: 459 TRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPD 518
Query: 728 TSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISK 787
+ L N DE+ K E LK HS+++AIAF L+ TP GS I + +NLR C+DCH K IS
Sbjct: 519 LTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISM 578
Query: 788 IVGREITVRDSSRFHHFKDGICSCRDYW 815
I REI VRD +RFH FK G CSC+DYW
Sbjct: 579 IYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 168/356 (47%), Gaps = 10/356 (2%)
Query: 86 EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
E ++ A IF + + + +I GY F EA + M + G +PD T+ L
Sbjct: 79 ENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
L C K I+ Q+H V KLG ++ V + NSLI+ Y + ++L+S +++++ + +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
+++++++ A G E + LF M + + + + L A + G IHG
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
+ ++ N+ V +L+D Y K CL +A +F KM + + ++Y+ MI+ A G +
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVT-TADSEVLVANALV 383
++ +F K+ + + + ++L+ ++ ++ GR++ ++ + + LV
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 384 DMYAKCRRPEEA-ERIFVKLSSRCTVPWTAMIS-----ANVQNGHF--EESLKLFS 431
D+ + EEA E I + V W +S N++ G +E LKL S
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSS 434
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC-RSGT 135
N +I+ Y + G++ ++ +F+ + + A +++ ++ + + E LF MC +
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
K + V+ L C + + +H +++ + +I+ SL+D Y K C+D A
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALH 290
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
++++M +R+++TY+A+I+G A G + A+++F +M G E + +VL A
Sbjct: 291 IFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNA 344
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N I ++ Y+K G L A IF M +RN +TY+ +I G + + A ++F +M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
+ G +PD+V +V++L+ C+ ++K +V + ++K G
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/686 (33%), Positives = 367/686 (53%), Gaps = 67/686 (9%)
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHC-------VDLASQLYK 198
LS N K ++ L Q+H +K G D+ LI +HC + A +L
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI-----LHCAISISDALPYARRLLL 63
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIA 257
P+ D+ +N L+ GY+ ++ +F+EM GF D F+F V+ A +
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA 317
G Q+H A+K L ++FVG L+ Y C+ ARK+F +M + + V++N +ITA
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA-- 181
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
FR N D+ R++ + +V S
Sbjct: 182 ----------CFR---------------------GN--DVAGAREIFDKMLVRNHTS--- 205
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
N ++ Y K E A+RIF ++ R V W+ MI NG F ES F E++R
Sbjct: 206 -WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
++ ++ + VL A + S GK LH ++ ++G+ + +AL+DMY++CG++ A
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMAR 324
Query: 498 QIFKEMPE-RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
+F+ M E R +VSW ++I+ A +G GE ++LF EM G PD +SF+ + ACSH
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHA 384
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
GL+EEG YF+ M +VY + P+ EHY +VD+ RSGK KA I +MP P I+W +
Sbjct: 385 GLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRT 444
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+L +C H N +LA++ ++L ++ ++ V +SN A AG+W+ V ++K+M +
Sbjct: 445 LLGACSSHGNIELAEQVKQRLNELDP-NNSGDLVLLSNAYATAGKWKDVASIRKSMIVQR 503
Query: 677 LTKVPAYSWVEIKHKVHIFCANDKN-------HPQMKEIILKIDILSEQMEKEGYVPDTS 729
+ K A+S VE+ ++ F A +K H ++KEIIL++ ++ GY P+ +
Sbjct: 504 IKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK------DEAGYTPEVA 557
Query: 730 CALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIV 789
AL++ +E+ K + + HSE+LA+AFAL +G+ I ++KNLR C DCHA +K+ SK+
Sbjct: 558 SALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVY 617
Query: 790 GREITVRDSSRFHHFKDGICSCRDYW 815
G EI VRD +RFH FKDG CSCRDYW
Sbjct: 618 GVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 1/211 (0%)
Query: 40 PSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM 99
P+ N I + ++ ARE+FD+M RN S NVM++GY+K G+L AK IF M
Sbjct: 170 PNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM 229
Query: 100 VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF 159
R+ V+++ +I G + + F E+F F + R+G P+ V+ +LS C+ +
Sbjct: 230 PHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGK 289
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ-RDSVTYNALIAGYANE 218
+H V K G+ V + N+LID Y + V +A +++ M + R V++ ++IAG A
Sbjct: 290 ILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMH 349
Query: 219 GFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
G +EA++LF EM G +F ++L+A
Sbjct: 350 GQGEEAVRLFNEMTAYGVTPDGISFISLLHA 380
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 168/402 (41%), Gaps = 66/402 (16%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG-TKPDYVTFVTLLS 147
L A+ + E +A + L+ GYS+SD+ + +FV M R G PD +F ++
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ----- 202
+ + ++ FQ+H +K G +S + + +LI Y CV+ A +++ EM Q
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 203 --------------------------RDSVTYNALIAGYANEGFNKEAIKLFMEM----- 231
R+ ++N ++AGY G + A ++F EM
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 232 -----------RDLGFETSDFTFQAVLYAGIGLDDIA---------------FGQQIHGY 265
+ F S F+ + AG+ ++++ FG+ +HG+
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-VSYNMMITAYAWTGLIKE 324
K W V V NAL+D YS+ + AR +F M E VS+ MI A G +E
Sbjct: 295 VEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE 354
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ-AIVTTADSEVLVANALV 383
++ LF ++ F ++L ++ ++ G S+ V + E+ +V
Sbjct: 355 AVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMV 414
Query: 384 DMYAKCRRPEEAERIFVKLSSRCT-VPWTAMISANVQNGHFE 424
D+Y + + ++A ++ T + W ++ A +G+ E
Sbjct: 415 DLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIE 456
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/743 (29%), Positives = 402/743 (54%), Gaps = 16/743 (2%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N++ + + Y K G+ A E+F S+ + +++T++I + ++ EA + + M
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
++G P+ TFV LL + + G +HS+++ G V++ SL+D Y + ++
Sbjct: 218 KAGVPPNEFTFVKLLGASSFLGLEFGK-TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A ++ ++D + ++++G+ KEA+ F+EMR LG + ++FT+ A+L
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL-VEARKLFYKMPELDGVSYN 310
+ + FG+QIH +K + VGNAL+D Y K VEA ++F M + VS+
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 311 MMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVT 370
+I G +++ L ++ + + + +L + + ++ ++H+ +
Sbjct: 397 TLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRR 456
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLF 430
D E++V N+LVD YA R+ + A + + R + +T++++ + G E +L +
Sbjct: 457 HVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVI 516
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
+ M D + DQ + + ASANL ++ GK LH Y ++SGF + ++LVDMY+KC
Sbjct: 517 NYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKC 576
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
GSL+DA ++F+E+ +VVSWN L+S ASNG + L FEEM + +PDSV+FL +
Sbjct: 577 GSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILL 636
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
+ACS+ L + GL YF M K+Y + P+ EHY +V +L R+G+ ++A ++ M P+
Sbjct: 637 SACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPN 696
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKK 670
+++ ++L +CR N L + A + + D A Y+ ++++ E+G+ E K +
Sbjct: 697 AMIFKTLLRACRYRGNLSLGEDMANKGLAL-APSDPALYILLADLYDESGKPELAQKTRN 755
Query: 671 AMRERGLTKVPAYSWVEIKHKVHIFCANDKNH-PQMKEIILKIDILSEQMEKEGYVPDTS 729
M E+ L+K S VE++ KVH F + D + I +I+ + E++++ G S
Sbjct: 756 LMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG-----S 810
Query: 730 CALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIV 789
NE+ +HS + A+ + I +P+ V+KN C DCH + +++++V
Sbjct: 811 PYRGNENAS-------FHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLV 863
Query: 790 GREITVRDSSRFHHFKDGICSCR 812
++ITVRD ++ H FK+G CSC+
Sbjct: 864 DKKITVRDGNQVHIFKNGECSCK 886
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 240/483 (49%), Gaps = 17/483 (3%)
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
+ +LS C GL +H V+K G + +CN+L+ Y K + A +L+ EM
Sbjct: 28 IRILSFCESNSSRIGL-HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
R + +I+ + A+ LF EM G ++FTF +V+ + GL DI++G ++
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
HG +KT N VG++L D YSK EA +LF + D +S+ MMI++
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
+E++ + ++ F F +L A++ L L+ G+ +HS IV V++ +L
Sbjct: 207 REALQFYSEMVKAGVPPNEFTFVKLLG-ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSL 265
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
VD Y++ + E+A R+ + WT+++S V+N +E++ F EMR + +
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK-DAIQIFK 501
T++++L + + S+ GKQ+HS I+ GF S G+ALVDMY KC + + +A ++F
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFG 385
Query: 502 EMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEE 561
M NVVSW LI +G + L EMV +P+ V+ V ACS
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK------ 439
Query: 562 GLRYFNSMTKVYKLVPKREHYA------SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWS 615
LR+ + +++ + +R S+VD S K D A +I M D I ++
Sbjct: 440 -LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK-RRDNITYT 497
Query: 616 SIL 618
S++
Sbjct: 498 SLV 500
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISAN 417
++G +H I + + N L+ +Y K A ++F ++S R WT MISA
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 418 VQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSI 477
++ F +L LF EM ++ TF+SV+++ A L IS G ++H +I++GF +
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLL 537
GS+L D+Y+KCG K+A ++F + + +SW +IS+ L+ + EMV
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 538 GYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDK 597
G P+ +F+ + A S GL E + +S V + S+VD + K +
Sbjct: 220 GVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 598 AEKLIAEMPFDPDEIMWSSILN 619
A +++ + D +W+S+++
Sbjct: 278 AVRVLNSSG-EQDVFLWTSVVS 298
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/591 (34%), Positives = 330/591 (55%), Gaps = 36/591 (6%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDF---YSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
+QIH +KT L+ + + L F + D L A+ +F D +N+MI +
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
+ + + S+ L++++ + + F ++L +N+ + Q+H+Q +++V
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 377 LVANALVDMYAKC-----------RRPEE--------------------AERIFVKLSSR 405
N+L++ YA R PE A +F K++ +
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
+ WT MIS VQ +E+L+LF EM+ +V D + A+ L A A L ++ GK +H
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
SY+ ++ G L+DMYAKCG +++A+++FK + +++V +W ALIS YA +G G
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 330
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
+ F EM +G +P+ ++F V TACS+ GLVEEG F SM + Y L P EHY I
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD 645
VD+L R+G D+A++ I EMP P+ ++W ++L +CRIHKN +L + E L ++
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH- 449
Query: 646 AAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQM 705
YV +NI A +W+ + ++ M+E+G+ KVP S + ++ H F A D++HP++
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEI 509
Query: 706 KEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKY-HSERLAIAFALISTPEGS 764
++I K I+ ++E+ GYVP+ L + +D + E++ + HSE+LAI + LI T G+
Sbjct: 510 EKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGT 569
Query: 765 PILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
I +MKNLR C DCH K+ISKI R+I +RD +RFHHF+DG CSC DYW
Sbjct: 570 IIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 17/302 (5%)
Query: 27 TCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKE 86
T I A+I K G++ N I TG A LFD++P + +S N +I GY+K
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
GK+ IA +F M E+NA+++T +I GY ++D EA +LF M S +PD V+ L
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL 254
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
S C ++ +HS++ K ++ LID Y K ++ A +++K + ++
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL----YAGIGLD-DIAFGQQ 261
+ ALI+GYA G +EAI FMEM+ +G + + TF AVL Y G+ + + F
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
Y +K T + ++D + L EA++ +MP + A W L
Sbjct: 375 ERDYNLKPT----IEHYGCIVDLLGRAGLLDEAKRFIQEMP--------LKPNAVIWGAL 422
Query: 322 IK 323
+K
Sbjct: 423 LK 424
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 164/361 (45%), Gaps = 33/361 (9%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L A+ +FD + + L+I G+S SD+ + L+ RM S + TF +LL
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C++ + Q+H+ + KLG+++ V NSLI+SY LA L+ +P+ D V++
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 209 NALIAGYANEG-------------------------------FNKEAIKLFMEMRDLGFE 237
N++I GY G NKEA++LF EM++ E
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
+ + L A L + G+ IH Y KT + + +G L+D Y+K + EA ++
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
F + + ++ +I+ YA+ G +E+I+ F ++Q F +L+ + +
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 358 QMGRQL-HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT-VPWTAMIS 415
+ G+ + +S + +VD+ + +EA+R ++ + V W A++
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 416 A 416
A
Sbjct: 425 A 425
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 335/602 (55%), Gaps = 48/602 (7%)
Query: 259 GQQIHGYAVKTTL--IWNVFVGNALLDFYSKHDCLVEARKLFYKMP--ELDGVSYNMMIT 314
G+++H + L ++ NAL FY+ +V A+KLF ++P E D V + +++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
+++ GL+ S+ LF +++ + + + + + A + DL +Q H A+ +
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
V V NAL+DMY KC E +RIF +L + V WT ++ V+ E ++F EM
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 435 RDNVTA--------------------------------DQATFASVLKASANLASISLGK 462
N A + T S+L A A ++ +G+
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 463 QLHSYIIRSGFM-------SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALI 515
+H Y ++ M + G+ALVDMYAKCG++ ++ +F+ M +RNVV+WNAL
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL 575
S A +G G + +F +M+ +PD ++F V +ACSH G+V+EG R F+S+ + Y L
Sbjct: 325 SGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGL 382
Query: 576 VPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
PK +HYA +VD+L R+G ++AE L+ EMP P+E++ S+L SC +H ++A+R
Sbjct: 383 EPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKR 442
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIF 695
+L M + + MSN+ G+ + ++ ++R+RG+ K+P S + + VH F
Sbjct: 443 ELIQMSP-GNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 696 CANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDI--KVESLKYHSERLAI 753
+ D++HP+ KEI LK++ + E++ GYVPD S + + + D+ K ++L HSE+LA+
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAV 561
Query: 754 AFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRD 813
F L+ T +P+LV KNLR C DCH+A+K++SK+ REI +RD +RFH FK G CSC D
Sbjct: 562 CFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSD 621
Query: 814 YW 815
YW
Sbjct: 622 YW 623
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 186/402 (46%), Gaps = 43/402 (10%)
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMP--QRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
+ N+L Y + A +L+ E+P ++D+V + L++ ++ G ++KLF+EMR
Sbjct: 45 LSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR 104
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
E D + + L+D+ F QQ HG AVK ++ +V V NAL+D Y K + E
Sbjct: 105 KRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSE 164
Query: 294 -------------------------------ARKLFYKMPELDGVSYNMMITAYAWTGLI 322
R++F++MPE + V++ +M+ Y G
Sbjct: 165 VKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFT 224
Query: 323 KESINLFRKLQFTKYDRRNF-PFATMLSLAANMLDLQMGRQLHSQAIVT-------TADS 374
+E + L ++ F NF +MLS A +L +GR +H A+ +
Sbjct: 225 REVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD 284
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+V+V ALVDMYAKC + + +F + R V W A+ S +G + +F +M
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI 344
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
R+ V D TF +VL A ++ + G + + G + + +VD+ + G ++
Sbjct: 345 RE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIE 403
Query: 495 DAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMV 535
+A + +EMP N V +L+ + + +G E ++ E++
Sbjct: 404 EAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELI 445
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 163/362 (45%), Gaps = 42/362 (11%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDS--MVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
SN + Y G++ A+++FD + E++ V +T L+ +S+ + + KLFV M R
Sbjct: 46 SNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRK 105
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV--- 190
+ D V+ V L C + + Q H VK+G ++V +CN+L+D Y K V
Sbjct: 106 RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEV 165
Query: 191 ----------------------------DLASQLYKEMPQRDSVTYNALIAGYANEGFNK 222
+ +++ EMP+R++V + ++AGY GF +
Sbjct: 166 KRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTR 225
Query: 223 EAIKLFMEMR-DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIW-------N 274
E ++L EM G + T ++L A ++ G+ +H YA+K ++ +
Sbjct: 226 EVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDD 285
Query: 275 VFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQF 334
V VG AL+D Y+K + + +F M + + V++N + + A G + I++F ++
Sbjct: 286 VMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-I 344
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
+ + F +LS ++ + G + + +V +VD+ + EE
Sbjct: 345 REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEE 404
Query: 395 AE 396
AE
Sbjct: 405 AE 406
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 137/312 (43%), Gaps = 47/312 (15%)
Query: 357 LQMGRQLHSQAIVTTAD----SEVLVANALVDMYAKCRRPEEAERIF--VKLSSRCTVPW 410
L+ G++LH A++TT+ ++NAL YA A+++F + LS + V W
Sbjct: 22 LRPGKELH--AVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDW 79
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
T ++S+ + G S+KLF EMRR V D + + A L + +Q H ++
Sbjct: 80 TTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVK 139
Query: 471 SGFMSSIYAGSALVDMYAKCG-------------------------------SLKDAIQI 499
G ++S+ +AL+DMY KCG L+ ++
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 500 FKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVL-LGYQPDSVSFLCVFTACSHWGL 558
F EMPERN V+W +++ Y G L+L EMV G+ + V+ + +AC+ G
Sbjct: 200 FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 559 VEEGLRYFNSMTKVYKLVPKREHY------ASIVDVLCRSGKFDKAEKLIAEMPFDPDEI 612
+ G K ++ + Y ++VD+ + G D + + M + +
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVV 318
Query: 613 MWSSILNSCRIH 624
W+++ + +H
Sbjct: 319 TWNALFSGLAMH 330
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 123/227 (54%), Gaps = 15/227 (6%)
Query: 34 VKTGFDPSTSRSNYQIMDLV-QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
VK G S N +MD+ + G +SE + +F+++ ++ +S V++ +K L
Sbjct: 138 VKMGVLTSVKVCN-ALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC-RSGTKPDYVTFVTLLSGC-N 150
+E+F M ERNAV +T+++ GY + E +L M R G ++VT ++LS C
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 151 DPKMIKGLFQVHSHVVK----LGHDSA---VIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
++ G + VH + +K +G +++ V++ +L+D Y K +D + +++ M +R
Sbjct: 257 SGNLVVGRW-VHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYA 249
+ VT+NAL +G A G + I +F +M R++ + D TF AVL A
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQMIREV--KPDDLTFTAVLSA 360
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/724 (31%), Positives = 373/724 (51%), Gaps = 64/724 (8%)
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYC-------KMHCVDLA 193
T + LS C IK Q+H+H+++ + N ++S+ + A
Sbjct: 14 TILEKLSFCKSLNHIK---QLHAHILR-------TVINHKLNSFLFNLSVSSSSINLSYA 63
Query: 194 SQLYKEMPQR-DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
++ +P +S+ +N + + + I + +R +G F+F +L A
Sbjct: 64 LNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSK 123
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
+ + G ++HG A K + + FV +D Y+ + AR +F +M D V++N M
Sbjct: 124 VSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTM 183
Query: 313 ITAYAWTGLIKESINLFRKLQFT----------------------KYDRRNFPF------ 344
I Y GL+ E+ LF +++ + +Y+R + F
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243
Query: 345 -------ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
++++ A + M R+ + V + V+ A+V Y+KC R ++A+
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN----LFVSTAMVSGYSKCGRLDDAQV 299
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
IF + + V WT MISA V++ + +E+L++F EM + D + SV+ A ANL
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 458 ISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISA 517
+ K +HS I +G S + +AL++MYAKCG L +F++MP RNVVSW+++I+A
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVP 577
+ +G+ L LF M +P+ V+F+ V CSH GLVEEG + F SMT Y + P
Sbjct: 420 LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITP 479
Query: 578 KREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQL 637
K EHY +VD+ R+ +A ++I MP + ++W S++++CRIH +L K AA+++
Sbjct: 480 KLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRI 539
Query: 638 FNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCA 697
+E D A V MSNI A +WE V +++ M E+ + K S ++ K H F
Sbjct: 540 LELEPDHDGA-LVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLI 598
Query: 698 NDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFAL 757
DK H Q EI K+D + +++ GYVPD L + +E+ K + + +HSE+LA+ F L
Sbjct: 599 GDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGL 658
Query: 758 ISTPEGSP------ILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSC 811
++ + I ++KNLR C DCH K++SK+ REI VRD +RFH +K+G+CSC
Sbjct: 659 MNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSC 718
Query: 812 RDYW 815
RDYW
Sbjct: 719 RDYW 722
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 217/480 (45%), Gaps = 51/480 (10%)
Query: 104 AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHS 163
++ + + S+S + + R+ G + D +F+ +L + + ++H
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 164 HVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKE 223
K+ + +D Y ++ A ++ EM RD VT+N +I Y G E
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 224 AIKLFMEMR-------------------------------------DLGFETSDFTFQAV 246
A KLF EM+ D+ +T T
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 247 LYAGIGLDDIA--FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL 304
+YAG G D+A F +++ + N+FV A++ YSK L +A+ +F + +
Sbjct: 256 MYAGAGCMDMAREFFRKMS--------VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLH 364
D V + MI+AY + +E++ +F ++ + +++S AN+ L + +H
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 365 SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFE 424
S V +SE+ + NAL++MYAKC + +F K+ R V W++MI+A +G
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEAS 427
Query: 425 ESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSAL 483
++L LF+ M+++NV ++ TF VL ++ + GK++ + + + +
Sbjct: 428 DALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 484 VDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
VD++ + L++A+++ + MP NVV W +L+SA +G+ E L F +L +PD
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE--LGKFAAKRILELEPD 545
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%), Gaps = 15/272 (5%)
Query: 55 TGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGY 114
G + ARE F +M RN S M+SGY K G+L A+ IFD +++ V +T +I Y
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 115 SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV 174
+SD EA ++F MC SG KPD V+ +++S C + ++ VHS + G +S +
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDL 234
I N+LI+ Y K +D ++++MP+R+ V+++++I + G +A+ LF M+
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 235 GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVG----NALLDFYSKHDC 290
E ++ TF VLY + G++I T +N+ ++D + + +
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLVEEGKKIFA---SMTDEYNITPKLEHYGCMVDLFGRANL 496
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
L EA ++ MP V+ N++I W L+
Sbjct: 497 LREALEVIESMP----VASNVVI----WGSLM 520
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 162/375 (43%), Gaps = 33/375 (8%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y G+++ A+ +FD M R+ VT+ +I Y + EAFKLF M S PD +
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
++S C ++ ++ +++ + +L+ Y C+D+A + +++M
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 203 RDSVTYNALIAGYANEG-------------------------------FNKEAIKLFMEM 231
R+ A+++GY+ G + +EA+++F EM
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL 291
G + + +V+ A L + + +H L + + NAL++ Y+K L
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
R +F KMP + VS++ MI A + G ++++LF +++ + F +L
Sbjct: 396 DATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVA-NALVDMYAKCRRPEEAERIFVKLS-SRCTVP 409
++ ++ G+++ + + L +VD++ + EA + + + V
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVI 515
Query: 410 WTAMISANVQNGHFE 424
W +++SA +G E
Sbjct: 516 WGSLMSACRIHGELE 530
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/525 (38%), Positives = 305/525 (58%), Gaps = 5/525 (0%)
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
AR++F +M + +N + Y L ES+ L++K++ F + ++ +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
+ D G LH+ + +VA LV MY K AE +F + + V W A
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAF 181
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
++ VQ G+ +L+ F++M D V D T S+L A L S+ +G++++ +
Sbjct: 182 LAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEE 533
+I +A +DM+ KCG+ + A +F+EM +RNVVSW+ +I YA NGD L LF
Sbjct: 242 DCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTT 301
Query: 534 MVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV--YKLVPKREHYASIVDVLCR 591
M G +P+ V+FL V +ACSH GLV EG RYF+ M + L P++EHYA +VD+L R
Sbjct: 302 MQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGR 361
Query: 592 SGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPY-V 650
SG ++A + I +MP +PD +W ++L +C +H++ L ++ A+ L +E D Y V
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVL--VETAPDIGSYHV 419
Query: 651 TMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIIL 710
+SNI A AG+W+ V KV+ MR+ G KV AYS VE + K+H F DK+HPQ K I
Sbjct: 420 LLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYE 479
Query: 711 KIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMK 770
K+D + +++ K GYVPDT H+ + + K SL +HSE+LAIAF LI G PI VMK
Sbjct: 480 KLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMK 539
Query: 771 NLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
NLR C DCHA K +S + EI +RD +RFHHF++G+CSC+++W
Sbjct: 540 NLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 197/425 (46%), Gaps = 13/425 (3%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
L + + PK +K ++H+ V++ G + L+++ + + A Q++ EM +
Sbjct: 17 LRASSSKPKQLK---KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
+N L GY E++ L+ +MRDLG +FT+ V+ A L D + G +H
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
+ VK V L+ Y K L A LF M D V++N + TG
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
++ F K+ +F +MLS + L++G +++ +A D ++V NA +D
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
M+ KC E A +F ++ R V W+ MI NG E+L LF+ M+ + + + T
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 445 FASVLKASANLASISLGKQLHSYIIRS---GFMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
F VL A ++ ++ GK+ S +++S + +VD+ + G L++A + K
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 502 EMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLC----VFTACSHW 556
+MP E + W AL+ A A + D K+ + VL+ PD S+ ++ A W
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMILGQKVAD--VLVETAPDIGSYHVLLSNIYAAAGKW 431
Query: 557 GLVEE 561
V++
Sbjct: 432 DCVDK 436
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 183/422 (43%), Gaps = 40/422 (9%)
Query: 3 LLHRKIPL-KNLSS--LAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLS 59
+L ++ PL K + S L A +S P I A +++TGF S
Sbjct: 1 MLAKQTPLTKQMLSELLRASSSKPKQLKKIHAIVLRTGF--------------------S 40
Query: 60 EARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQ 119
E L Q+ + + V+I G + A+++FD M + + L GY ++
Sbjct: 41 EKNSLLTQL-----LENLVVI------GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 120 FIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNS 179
E+ L+ +M G +PD T+ ++ + F +H+HVVK G I+
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
L+ Y K + A L++ M +D V +NA +A G + A++ F +M +
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY 299
FT ++L A L + G++I+ A K + N+ V NA LD + K AR LF
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
+M + + VS++ MI YA G +E++ LF +Q F +LS ++ +
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
Query: 360 GRQLHSQAIVTTADSEVLVAN----ALVDMYAKCRRPEEAERIFVKLSSRC-TVPWTAMI 414
G++ S +V + D + +VD+ + EEA K+ T W A++
Sbjct: 330 GKRYFS-LMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Query: 415 SA 416
A
Sbjct: 389 GA 390
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 54 QTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
Q G L E++D+ N I N + +LK G A+ +F+ M +RN V+++
Sbjct: 222 QLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWST 281
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMI---KGLFQ--VHSH 164
+I GY+ + EA LF M G +P+YVTF+ +LS C+ ++ K F V S+
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Query: 165 VVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP-QRDSVTYNALIAGYA 216
L C ++D + ++ A + K+MP + D+ + AL+ A
Sbjct: 342 DKNLEPRKEHYAC--MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>AT3G14330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4779688-4782451 REVERSE
Length = 710
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/529 (35%), Positives = 313/529 (59%), Gaps = 11/529 (2%)
Query: 294 ARKLFYKMPE---LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
ARK+F + + L + M Y+ G ++++ ++ + + + NF + L
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPW 410
++ DL++GR +H+Q + + +V N L+ +Y + ++A ++F +S R V W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
++IS + E LF +M+ + + AT ++L A + +A++ GK++H+ I++
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKL 530
S + ++L+DMY KCG ++ + ++F M +++ SWN +++ YA NG+ E + L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 531 FEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLC 590
FE M+ G PD ++F+ + + CS GL E GL F M +++ P EHYA +VD+L
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 591 RSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYV 650
R+GK +A K+I MPF P +W S+LNSCR+H N + + AA++LF +E + YV
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP-HNPGNYV 544
Query: 651 TMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCAND----KNHPQMK 706
+SNI A+A W++V K+++ M++RG+ K SWV++K K+ IF A +N + K
Sbjct: 545 MVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYK 604
Query: 707 EIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPI 766
++ + L E +EK GY P+TS LH+ DE+ K + HSERLA ++LI T EG PI
Sbjct: 605 KVWTE---LQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPI 661
Query: 767 LVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+ KNLR C DCH+ +K++S++ R I +RD+ RFHHF DGICSC+DYW
Sbjct: 662 RITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 151/316 (47%), Gaps = 4/316 (1%)
Query: 88 KLSIAKEIFDSMVERNAVT---YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
+L +A++IFD + + + +T + + GYS++ +A ++V M S +P +
Sbjct: 182 RLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISV 241
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
L C D K ++ +H+ +VK ++ N L+ Y + D A +++ M +R+
Sbjct: 242 ALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERN 301
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
VT+N+LI+ + + E LF +M++ S T +L A + + G++IH
Sbjct: 302 VVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHA 361
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
+K+ +V + N+L+D Y K + +R++F M D S+N+M+ YA G I+E
Sbjct: 362 QILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEE 421
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA-LV 383
INLF + + F +LS ++ + G L + S L A LV
Sbjct: 422 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLV 481
Query: 384 DMYAKCRRPEEAERIF 399
D+ + + +EA ++
Sbjct: 482 DILGRAGKIKEAVKVI 497
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 56 GQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYS 115
Q+ + +E DQ+ Y NV++ Y++ G A+++FD M ERN VT+ LI S
Sbjct: 260 AQIVKRKEKVDQVVY------NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVI 175
K + E F LF +M + T T+L C+ + ++H+ ++K V
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
+ NSL+D Y K V+ + +++ M +D ++N ++ YA G +E I LF M + G
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 236 FETSDFTFQAVL 247
TF A+L
Sbjct: 434 VAPDGITFVALL 445
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 9/284 (3%)
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVP---WTAMISANVQNGHFEESLKLFSEMRRDNV 438
L+ +++ CRR + A +IF ++ + W AM +NG ++L ++ +M +
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
+ + LKA +L + +G+ +H+ I++ + L+ +Y + G DA +
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV--LLGYQPDSVSFLCVFTACSHW 556
+F M ERNVV+WN+LIS + LF +M ++G+ +++ + ACS
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT--TILPACSRV 350
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
+ G + K K P S++D+ + G+ + + ++ M D W+
Sbjct: 351 AALLTGKEIHAQILK-SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM-LTKDLASWNI 408
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
+LN I+ N + E + V D +V + + ++ G
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTG 452
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N ++ Y K G++ ++ +FD M+ ++ ++ +++ Y+ + E LF M SG
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 137 PDYVTFVTLLSGCND 151
PD +TFV LLSGC+D
Sbjct: 436 PDGITFVALLSGCSD 450
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 334/593 (56%), Gaps = 40/593 (6%)
Query: 262 IHGYAVKTTLIWNVFVGNALL-------DFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
IHG+ ++T LI +VFV + LL F + L A +F ++ + +N++I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
++ ++ + ++ ++ N F ++ ++ M + +G Q HSQ + +
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM--------------------- 413
+V V N+LV MYA C A RIF ++ R V WT+M
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 414 ----------ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
I+ +N FE+++ LF M+R+ V A++ SV+ + A+L ++ G++
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
+ Y+++S ++ G+ALVDM+ +CG ++ AI +F+ +PE + +SW+++I A +G
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ F +M+ LG+ P V+F V +ACSH GLVE+GL + +M K + + P+ EHY
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYG 390
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVL 643
IVD+L R+GK +AE I +M P+ + ++L +C+I+KN ++A+R L ++
Sbjct: 391 CIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKP- 449
Query: 644 RDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFC-ANDKNH 702
+ YV +SNI A AGQW+ + ++ M+E+ + K P +S +EI K++ F +D+ H
Sbjct: 450 EHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKH 509
Query: 703 PQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPE 762
P+M +I K + + ++ GY +T A + DE+ K S+ HSE+LAIA+ ++ T
Sbjct: 510 PEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKP 569
Query: 763 GSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
G+ I ++KNLR C DCH K+IS++ GRE+ VRD +RFHHF++G+CSCRDYW
Sbjct: 570 GTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 120/219 (54%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLS 90
++IV+ GF N + G ++ A +F QM +R+ +S M++GY K G +
Sbjct: 141 SQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVE 200
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
A+E+FD M RN T++++I GY+K++ F +A LF M R G + V+++S C
Sbjct: 201 NAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCA 260
Query: 151 DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNA 210
++ + + +VVK +I+ +L+D + + ++ A +++ +P+ DS+++++
Sbjct: 261 HLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSS 320
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+I G A G +A+ F +M LGF D TF AVL A
Sbjct: 321 IIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA 359
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 167/374 (44%), Gaps = 43/374 (11%)
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY---AKCRRPEE- 394
R P +L ++ DL++ +H + T S+V VA+ L+ + + +P
Sbjct: 10 RFKHPKLALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL 66
Query: 395 ---AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKA 451
A IF ++ + + +I ++ +++M + + D TF ++KA
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 452 SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYA----------------------- 488
S+ + + +G+Q HS I+R GF + +Y ++LV MYA
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 489 --------KCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
KCG +++A ++F EMP RN+ +W+ +I+ YA N E + LFE M G
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 541 PDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEK 600
+ + V ++C+H G +E G R + + K + V A +VD+ R G +KA
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIH 305
Query: 601 LIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
+ +P + D + WSSI+ +H + A Q+ ++ + + + + + G
Sbjct: 306 VFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 661 QWESVGKVKKAMRE 674
E ++ + M++
Sbjct: 365 LVEKGLEIYENMKK 378
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 32/353 (9%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L A IF + N + LLI +S + +AF + +M +S PD +TF L+
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLID-------------------------- 182
++ + + Q HS +V+ G + V + NSL+
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 183 -----SYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
YCK V+ A +++ EMP R+ T++ +I GYA ++AI LF M+ G
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
++ +V+ + L + FG++ + Y VK+ + N+ +G AL+D + + + +A +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
F +PE D +S++ +I A G ++++ F ++ + R+ F +LS ++ +
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 358 QMGRQLHSQAIVTTA-DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
+ G +++ + + +VDM + + EAE +K+ + P
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
>AT2G33760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14275800-14277551 FORWARD
Length = 583
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/577 (33%), Positives = 333/577 (57%), Gaps = 9/577 (1%)
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
++A++ AG + + QQ+H + + T + + L+ + LF +P
Sbjct: 12 YEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVP 68
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ 362
D +N +I + + L + +R++ + N+ F +++ A++ L++G+
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH 422
+H A+V+ + V ALV Y+KC E A ++F ++ + V W +++S QNG
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
+E++++F +MR D ATF S+L A A ++SLG +H YII G ++ G+A
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 483 LVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV-LLGYQP 541
L+++Y++CG + A ++F +M E NV +W A+ISAY ++G G+ ++LF +M G P
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIP 308
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
++V+F+ V +AC+H GLVEEG + MTK Y+L+P EH+ +VD+L R+G D+A K
Sbjct: 309 NNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKF 368
Query: 602 IAEMPFDPDEI---MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
I ++ +W+++L +C++H+N DL A++L +E + +V +SNI A
Sbjct: 369 IHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEP-DNPGHHVMLSNIYAL 427
Query: 659 AGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQ 718
+G+ + V ++ M L K YS +E+++K ++F D++H + EI ++ L +
Sbjct: 428 SGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISR 487
Query: 719 MEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDC 778
++ GY P + +H +E+ K +L+YHSE+LA+AF L+ T + I ++KNLR C DC
Sbjct: 488 CKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDC 546
Query: 779 HAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
H+A K IS + R+ITVRD RFHHF++G CSC DYW
Sbjct: 547 HSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 195/395 (49%), Gaps = 8/395 (2%)
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAG 214
+K L QVH+H++ G+ + + LI C + L+ +P D +N++I
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 215 YANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWN 274
+ + + M S++TF +V+ + L + G+ +H +AV + +
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 275 VFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQF 334
+V AL+ FYSK + AR++F +MPE V++N +++ + GL E+I +F +++
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
+ ++ + F ++LS A + +G +H I D V + AL+++Y++C +
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD-NVTADQATFASVLKASA 453
A +F K+ WTAMISA +G+ +++++LF++M D + TF +VL A A
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 454 NLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS-- 510
+ + G+ ++ + +S + + +VDM + G L +A + ++ +
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 511 --WNALISAYASNGDGEATLKLFEEMVLLGYQPDS 543
W A++ A + + + +++ + ++ L +PD+
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIAL--EPDN 414
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 150/300 (50%), Gaps = 14/300 (4%)
Query: 127 FVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
+ RM S P TF +++ C D ++ VH H V G + +L+ Y K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 187 MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
++ A Q++ MP++ V +N+L++G+ G EAI++F +MR+ GFE TF ++
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
L A ++ G +H Y + L NV +G AL++ YS+ + +AR++F KM E +
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQ-FTKYDRRNFPFATMLSLAANMLDLQMGRQLH- 364
++ MI+AY G ++++ LF K++ N F +LS A+ ++ GR ++
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 365 ----SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKL--SSRCTVP--WTAMISA 416
S ++ + V +VDM + +EA + +L + + T P WTAM+ A
Sbjct: 335 RMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 2/232 (0%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+T +++ Y K G + A+++FD M E++ V + L+ G+ ++ EA ++F +M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
SG +PD TFV+LLS C + VH +++ G D V + +LI+ Y + V
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR-DLGFETSDFTFQAVLYAG 250
A +++ +M + + + A+I+ Y G+ ++A++LF +M D G ++ TF AVL A
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 251 IGLDDIAFGQQIHGYAVKT-TLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
+ G+ ++ K+ LI V ++D + L EA K +++
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQL 372
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 342/634 (53%), Gaps = 3/634 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLF--VRMCRSG 134
N + + G L A+++FD M + V++T +I Y ++ EA LF +R+
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
PD +L C I +H++ VK S+V + +SL+D Y ++ +D +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
+++ EMP R++VT+ A+I G + G KE + F EM + +TF L A GL
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+ +G+ IH + + + + V N+L Y++ + + LF M E D VS+ +I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
AY G +++ F K++ ++ FA+M S A++ L G QLH + +
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+ V+N+++ MY+ C A +F + R + W+ +I Q G EE K FS MR
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
+ AS+L S N+A I G+Q+H+ + G + S+L++MY+KCGS+K
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIK 463
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
+A IF E ++VS A+I+ YA +G + + LFE+ + +G++PDSV+F+ V TAC+
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACT 523
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMW 614
H G ++ G YFN M + Y + P +EHY +VD+LCR+G+ AEK+I EM + D+++W
Sbjct: 524 HSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVW 583
Query: 615 SSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
+++L +C+ + + +RAAE++ ++ A VT++NI + G E V+K M+
Sbjct: 584 TTLLIACKAKGDIERGRRAAERILELDPT-CATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 675 RGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEI 708
+G+ K P +S ++IK V F + D+ HPQ ++I
Sbjct: 643 KGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDI 676
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 186/387 (48%), Gaps = 10/387 (2%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
+N + + Y + G++ +F++M ER+ V++T LI Y + Q ++A + F++M S
Sbjct: 247 ANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV 306
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
P+ TF ++ S C + Q+H +V+ LG + ++ + NS++ Y + AS
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
L++ M RD ++++ +I GY GF +E K F MR G + +DF ++L +
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV 426
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
I G+Q+H A+ L N V ++L++ YSK + EA +F + D VS MI
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG----RQLHSQAIVTT 371
YA G KE+I+LF K + + F ++L+ + L +G + +
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLS-SRCTVPWTAMISANVQNGHFEESLKLF 430
A +VD+ + R +AE++ ++S + V WT ++ A G E +
Sbjct: 547 AKEHY---GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 603
Query: 431 SEMRRDNVTADQA--TFASVLKASANL 455
+ + T A T A++ ++ NL
Sbjct: 604 ERILELDPTCATALVTLANIYSSTGNL 630
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 34/212 (16%)
Query: 50 MDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL 109
M +++ G+ A L + +T+ S+ +I+ Y K G + A IF + V+ T
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSS-LINMYSKCGSIKEASMIFGETDRDDIVSLTA 482
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
+I GY++ + EA LF + + G +PD VTF+++L+ C HS + LG
Sbjct: 483 MINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC-----------THSGQLDLG 531
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
H ++ + Y P ++ Y ++ G +A K+
Sbjct: 532 -----------------FHYFNMMQETYNMRPAKEH--YGCMVDLLCRAGRLSDAEKMIN 572
Query: 230 EMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
EM ++ D + +L A DI G++
Sbjct: 573 EM---SWKKDDVVWTTLLIACKAKGDIERGRR 601
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 338/611 (55%), Gaps = 11/611 (1%)
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK--PDYVTFVT 144
G ++ A+++F+ M + + ++Y ++I Y + + +A +F+RM G K PD T+
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 145 LLSGCNDPKMIKGLFQVHSHVVK--LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
+ + K +K VH +++ G D V N+L+ Y V++A ++ M
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ--NALLAMYMNFGKVEMARDVFDVMKN 180
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
RD +++N +I+GY G+ +A+ +F M + + T ++L L D+ G+ +
Sbjct: 181 RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
H + L + V NAL++ Y K + EAR +F +M D +++ MI Y G +
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV 300
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
+ ++ L R +QF A+++S+ + L + G+ LH A+ S++++ +L
Sbjct: 301 ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSL 360
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
+ MYAKC+R + R+F S T PW+A+I+ VQN ++L LF MRR++V +
Sbjct: 361 ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
AT S+L A A LA + +H Y+ ++GFMSS+ A + LV +Y+KCG+L+ A +IF
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 503 MPE----RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
+ E ++VV W ALIS Y +GDG L++F EMV G P+ ++F ACSH GL
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGL 540
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
VEEGL F M + YK + + HY IVD+L R+G+ D+A LI +PF+P +W ++L
Sbjct: 541 VEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
+C H+N L + AA +LF +E + YV ++NI A G+W+ + KV+ M GL
Sbjct: 601 AACVTHENVQLGEMAANKLFELEP-ENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLR 659
Query: 679 KVPAYSWVEIK 689
K P +S +EI+
Sbjct: 660 KKPGHSTIEIR 670
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 233/491 (47%), Gaps = 12/491 (2%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
+H HV+ G S I+ ++L +Y + A +L++EMPQ ++YN +I Y EG
Sbjct: 37 LHCHVITGGRVSGHIL-STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL 95
Query: 221 NKEAIKLFMEMRDLGFET--SDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVG 278
+AI +F+ M G + +T+ V A L + G +HG +++ + +V
Sbjct: 96 YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155
Query: 279 NALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYD 338
NALL Y + AR +F M D +S+N MI+ Y G + +++ +F + D
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ +ML + ++ DL+MGR +H ++ V NALV+MY KC R +EA +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 399 FVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASI 458
F ++ R + WT MI+ ++G E +L+L M+ + V + T AS++ + +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 459 SLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAY 518
+ GK LH + +R S I ++L+ MYAKC + ++F + + W+A+I+
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 519 ASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPK 578
N L LF+ M +P+ + + A + + + + +TK +
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSS 454
Query: 579 REHYASIVDVLCRSGKFDKAEKL---IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
+ +V V + G + A K+ I E D ++W ++++ +H + A
Sbjct: 455 LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD----GHNAL 510
Query: 636 QLFNMEVLRDA 646
Q+F ME++R
Sbjct: 511 QVF-MEMVRSG 520
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 228/474 (48%), Gaps = 14/474 (2%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
R+ N +++ Y+ GK+ +A+++FD M R+ +++ +I GY ++ +A +F M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
D+ T V++L C K ++ VH V + + + N+L++ Y K +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG 250
D A ++ M +RD +T+ +I GY +G + A++L M+ G + T +++
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 251 IGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYN 310
+ G+ +HG+AV+ + ++ + +L+ Y+K + ++F + ++
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 311 MMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVT 370
+I L+ +++ LF++++ + ++L A + DL+ +H T
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIF----VKLSSRCTVPWTAMISANVQNGHFEES 426
S + A LV +Y+KC E A +IF K S+ V W A+IS +G +
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 427 LKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII---RSGFMSSIYAGSAL 483
L++F EM R VT ++ TF S L A ++ + G L +++ ++ S+ Y + +
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY--TCI 567
Query: 484 VDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGD---GE-ATLKLFE 532
VD+ + G L +A + +P E W AL++A ++ + GE A KLFE
Sbjct: 568 VDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFE 621
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 184/408 (45%), Gaps = 23/408 (5%)
Query: 57 QLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSK 116
+L E + L D++ +N +++ YLK G++ A+ +FD M R+ +T+T +I GY++
Sbjct: 242 KLVEEKRLGDKIEVKNA-----LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 117 SDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVII 176
A +L M G +P+ VT +L+S C D + +H V+ S +II
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 177 CNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGF 236
SLI Y K VDL +++ + + ++A+IAG +A+ LF MR
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
E + T ++L A L D+ IH Y KT + ++ L+ YSK L A K
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 297 LFYKMPE----LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
+F + E D V + +I+ Y G ++ +F ++ + F + L+ +
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 353 NMLDLQMGRQLHS---QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT-V 408
+ ++ G L + T A S +VD+ + R +EA + + T
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYT--CIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 409 PWTAMISA-----NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKA 451
W A+++A NVQ G + KLF E+ +N T + A++ A
Sbjct: 595 VWGALLAACVTHENVQLGEMAAN-KLF-ELEPEN-TGNYVLLANIYAA 639
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 9/248 (3%)
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
R +N + + S+L A SIS K LH ++I G +S + S L YA CG +
Sbjct: 7 RANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHI 65
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ--PDSVSFLCVFT 551
A ++F+EMP+ +++S+N +I Y G + +F MV G + PD ++ V
Sbjct: 66 TYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAK 125
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA--SIVDVLCRSGKFDKAEKLIAEMPFDP 609
A ++ GL + + + R+ Y +++ + GK + A + M +
Sbjct: 126 AAGELKSMKLGLVVHGRILRSW---FGRDKYVQNALLAMYMNFGKVEMARDVFDVMK-NR 181
Query: 610 DEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVK 669
D I W+++++ + + A + + N V D A V+M + E V
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVH 241
Query: 670 KAMRERGL 677
K + E+ L
Sbjct: 242 KLVEEKRL 249
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 315/571 (55%), Gaps = 22/571 (3%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYS--------KHDCLVEARKLFYKMPELDGVSYNM 311
+QIH ++T+LI N V + L + + C V +++L P L N
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL---NPTLSHC--NT 82
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML--DLQMGRQLHSQAIV 369
MI A++ + E LFR L+ N P ++ +L + DL G Q+H +
Sbjct: 83 MIRAFSLSQTPCEGFRLFRSLRRNSSLPAN-PLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 370 TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKL 429
S+ L+ L+D+Y+ C +A ++F ++ R TV W + S ++N + L L
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 430 FSEMRRD---NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
F +M+ D V D T L+A ANL ++ GKQ+H +I +G ++ + LV M
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSM 261
Query: 487 YAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
Y++CGS+ A Q+F M ERNVVSW ALIS A NG G+ ++ F EM+ G P+ +
Sbjct: 262 YSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTL 321
Query: 547 LCVFTACSHWGLVEEGLRYFNSM-TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
+ +ACSH GLV EG+ +F+ M + +K+ P HY +VD+L R+ DKA LI M
Sbjct: 322 TGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM 381
Query: 606 PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV 665
PD +W ++L +CR+H + +L +R L ++ +A YV + N + G+WE V
Sbjct: 382 EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKA-EEAGDYVLLLNTYSTVGKWEKV 440
Query: 666 GKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYV 725
+++ M+E+ + P S +E++ VH F +D +HP+ +EI + +++Q++ GYV
Sbjct: 441 TELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 726 PDTSCALHN-EDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKV 784
+ + LHN E E+ K +L+YHSE+LAIAF ++ TP G+ I V KNLR C DCH K
Sbjct: 501 AEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKF 560
Query: 785 ISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+S + R + VRD SRFHHFK G CSC D+W
Sbjct: 561 VSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 164/366 (44%), Gaps = 17/366 (4%)
Query: 209 NALIAGYANEGFNKEAIKLFMEMR-DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
N +I ++ E +LF +R + + + L I D+ G QIHG
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
+ + + L+D YS + +A K+F ++P+ D VS+N++ + Y ++ +
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 328 LFRKLQFTKYDRRNFPFATMLSLA----ANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
LF K++ D P LA AN+ L G+Q+H + ++N LV
Sbjct: 201 LFDKMK-NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 384 DMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQA 443
MY++C ++A ++F + R V WTA+IS NG +E+++ F+EM + ++ ++
Sbjct: 260 SMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 444 TFASVLKASANLASISLGKQLHSYIIRSG---FMSSIYAGSALVDMYAKCGSLKDAIQIF 500
T +L A ++ ++ G +RSG +++ +VD+ + L A +
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDR-MRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 501 KEM---PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP--DSVSFLCVFTACSH 555
K M P+ + W L+ A +GD E ++ ++ L + D V L ++
Sbjct: 379 KSMEMKPDSTI--WRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGK 436
Query: 556 WGLVEE 561
W V E
Sbjct: 437 WEKVTE 442
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 30/222 (13%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLS-EARELFDQMPYRNTISSNVMISGYLKEG 87
I +I GF S S +MDL T + S +A ++FD++P R+T+S NV+ S YL+
Sbjct: 135 IHGKIFSDGF-LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 88 KLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
+ +FD M K+D V C KPD VT + L
Sbjct: 194 RTRDVLVLFDKM----------------KND---------VDGC---VKPDGVTCLLALQ 225
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C + + QVH + + G A+ + N+L+ Y + +D A Q++ M +R+ V+
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVS 285
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+ ALI+G A GF KEAI+ F EM G + T +L A
Sbjct: 286 WTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKP-DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL 168
+I +S S E F+LF + R+ + P + ++ L C + G Q+H +
Sbjct: 83 MIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD 142
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF 228
G S ++ +L+D Y A +++ E+P+RD+V++N L + Y ++ + LF
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLF 202
Query: 229 MEMR---DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY 285
+M+ D + T L A L + FG+Q+H + + L + + N L+ Y
Sbjct: 203 DKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
S+ + +A ++FY M E + VS+ +I+ A G KE+I F ++
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 37/220 (16%)
Query: 48 QIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTY 107
Q+ D + LS A L SN ++S Y + G + A ++F M ERN V++
Sbjct: 238 QVHDFIDENGLSGALNL-----------SNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP-----------KMIK 156
T LI G + + EA + F M + G P+ T LLS C+ +M
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRS 346
Query: 157 GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR-DSVTYNALIAGY 215
G F++ ++ G ++D + +D A L K M + DS + L+
Sbjct: 347 GEFKIKPNLHHYG---------CVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGAC 397
Query: 216 ANEG---FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
G + I +E++ E D+ Y+ +G
Sbjct: 398 RVHGDVELGERVISHLIELK--AEEAGDYVLLLNTYSTVG 435
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/590 (34%), Positives = 322/590 (54%), Gaps = 40/590 (6%)
Query: 255 DIAFGQQIHGYAVKTTLI---WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
D++ +Q+H + ++TT +F+ +L S + A ++F + +N
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 312 MITAYAW-TGLIKESINLFRKL---QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
+I A A +E+ L+RK+ + D+ FPF +L A + G+Q+H Q
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPF--VLKACAYIFGFSEGKQVHCQI 177
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESL 427
+ +V V N L+ +Y C + A ++F ++ R V W +MI A V+ G ++ +L
Sbjct: 178 VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSAL 237
Query: 428 KLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS---GFMSSIYAGSALV 484
+LF EM+R + D T SVL A A L S+SLG H++++R + ++L+
Sbjct: 238 QLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLI 296
Query: 485 DMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV--LLGYQPD 542
+MY KCGSL+ A Q+F+ M +R++ SWNA+I +A++G E + F+ MV +P+
Sbjct: 297 EMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPN 356
Query: 543 SVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLI 602
SV+F+ + AC+H G V +G +YF+ M + Y + P EHY IVD++ R+G +A ++
Sbjct: 357 SVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMV 416
Query: 603 AEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD---------------AA 647
MP PD ++W S+L++C K+ A + E+ R+ +
Sbjct: 417 MSMPMKPDAVIWRSLLDAC--------CKKGASVELSEEIARNIIGTKEDNESSNGNCSG 468
Query: 648 PYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKE 707
YV +S + A A +W VG V+K M E G+ K P S +EI H F A D +HPQ K+
Sbjct: 469 AYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQ 528
Query: 708 IILKIDILSEQMEKEGYVPDTSCA--LHNEDEDIKVESLKYHSERLAIAFALISTPEGSP 765
I ++ ++ +++ GY+PD S A + ++ K SL+ HSERLAIAF LI+ P +P
Sbjct: 529 IYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTP 588
Query: 766 ILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
I + KNLR C DCH K+ISK+ EI VRD RFHHFKDG CSC DYW
Sbjct: 589 IRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 183/367 (49%), Gaps = 15/367 (4%)
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKE-AIKLFMEMRDLGFETSD-FTFQAVL 247
V+ A +++ + S +N LI A++ KE A L+ +M + G + D TF VL
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV 307
A + + G+Q+H VK +V+V N L+ Y CL ARK+F +MPE V
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHS-- 365
S+N MI A G ++ LFR++Q ++ + ++LS A + L +G H+
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 366 -QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFE 424
+ +VLV N+L++MY KC AE++F + R W AMI +G E
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 425 ESLKLFSEM--RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS-SIYAGS 481
E++ F M +R+NV + TF +L A + ++ G+Q ++R + ++
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 482 ALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMV--LLG 538
+VD+ A+ G + +AI + MP + + V W +L+ A G A+++L EE+ ++G
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG---ASVELSEEIARNIIG 454
Query: 539 YQPDSVS 545
+ D+ S
Sbjct: 455 TKEDNES 461
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 18/271 (6%)
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTADSE---VLVANALVDMYAKCRRPEEAERIFVKLS 403
+ SLA D+ +QLH+ + TT E + + ++ + + A R+F +
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 404 SRCTVPWTAMISANVQN-GHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLG 461
+ + W +I A + EE+ L+ +M R + D+ TF VLKA A + S G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASN 521
KQ+H I++ GF +Y + L+ +Y CG L A ++F EMPER++VSWN++I A
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 522 GDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG-------LRYFNSMTKVYK 574
G+ ++ L+LF EM ++PD + V +AC+ G + G LR + +
Sbjct: 231 GEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 289
Query: 575 LVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
LV S++++ C+ G AE++ M
Sbjct: 290 LVKN-----SLIEMYCKCGSLRMAEQVFQGM 315
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 9/271 (3%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
+N +I Y G L +A+++FD M ER+ V++ +I + ++ A +LF M RS
Sbjct: 189 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-F 247
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV-KLGHDSA--VIICNSLIDSYCKMHCVDL 192
+PD T ++LS C + H+ ++ K D A V++ NSLI+ YCK + +
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRM 307
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDL--GFETSDFTFQAVLYAG 250
A Q+++ M +RD ++NA+I G+A G +EA+ F M D + TF +L A
Sbjct: 308 AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Query: 251 IGLDDIAFGQQIHGYAVKTTLIWNVFVG-NALLDFYSKHDCLVEARKLFYKMP-ELDGVS 308
+ G+Q V+ I ++D ++ + EA + MP + D V
Sbjct: 368 NHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVI 427
Query: 309 YNMMITAYAWTGL-IKESINLFRKLQFTKYD 338
+ ++ A G ++ S + R + TK D
Sbjct: 428 WRSLLDACCKKGASVELSEEIARNIIGTKED 458
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ + N +I Y K G L +A+++F M +R+ ++ +I G++ + EA F RM
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 132 --RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK-LGHDSAVIICNSLIDSYCKMH 188
R +P+ VTFV LL CN + Q +V+ + A+ ++D +
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 189 CVDLASQLYKEMPQR-DSVTYNALIAGYANEGFNKE 223
+ A + MP + D+V + +L+ +G + E
Sbjct: 408 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
>AT4G32430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15652982-15655273 FORWARD
Length = 763
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/658 (32%), Positives = 361/658 (54%), Gaps = 18/658 (2%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
SN ++ Y K G+ A IF+++V+ + V++ ++ G+ D A VRM +G
Sbjct: 114 SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGV 170
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
D T+ T LS C + Q+ S VVK G +S +++ NS I Y + A +
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 196 LYKEMPQRDSVTYNALIAGYANEG-FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
++ EM +D +++N+L++G + EG F EA+ +F +M G E +F +V+
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
D+ +QIHG +K + VGN L+ YSK L + +F++M E + VS+ MI+
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
+ +++++F ++F F +++ ++ G ++H I T S
Sbjct: 351 SNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
E V N+ + +YAK E+A++ F ++ R + W AMIS QNG E+LK+F
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA 465
Query: 435 RDNVTADQATFASVLKASANLASISL--GKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
+ + ++ TF SVL A A IS+ G++ H+++++ G S SAL+DMYAK G+
Sbjct: 466 AETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGN 524
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
+ ++ ++F EM ++N W ++ISAY+S+GD E + LF +M+ PD V+FL V TA
Sbjct: 525 IDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEI 612
C+ G+V++G FN M +VY L P EHY+ +VD+L R+G+ +AE+L++E+P P E
Sbjct: 585 CNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGES 644
Query: 613 MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAM 672
M S+L SCR+H N + + AE M+ + YV M NI AE +W+ +++KAM
Sbjct: 645 MLQSMLGSCRLHGNVKMGAKVAELAMEMKP-ELSGSYVQMYNIYAEKEEWDKAAEIRKAM 703
Query: 673 RERGLTKVPAYSWVEIKH-----KVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYV 725
R++ ++K +SW+++ + F + DK+HP+ EI ++I+ +M EG V
Sbjct: 704 RKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/583 (26%), Positives = 283/583 (48%), Gaps = 43/583 (7%)
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQF--------IEAFKLFVRMCRSGTKPDYVTF 142
IA ++FD +RNA T +S S+ + FK +++ G D VT
Sbjct: 26 IAHKLFDGSSQRNATTSI----NHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTL 81
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
L C +K Q+H G S V + N+++ Y K D A +++ +
Sbjct: 82 CLALKACRGD--LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD 139
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
D V++N +++G+ + N+ A+ + M+ G FT+ L +G + G Q+
Sbjct: 140 PDVVSWNTILSGFDD---NQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
VKT L ++ VGN+ + YS+ AR++F +M D +S+N +++ + G
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 323 K-ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
E++ +FR + + + F ++++ + DL++ RQ+H I +S + V N
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
L+ Y+KC E + +F ++S R V WT MIS+N ++++ +F MR D V +
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPN 371
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
+ TF ++ A I G ++H I++GF+S G++ + +YAK +L+DA + F+
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 502 EMPERNVVSWNALISAYASNGDGEATLKLF-----EEMVLLGYQPDSVSFLCVFTACSHW 556
++ R ++SWNA+IS +A NG LK+F E M P+ +F V A +
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM------PNEYTFGSVLNAIAFA 485
Query: 557 G--LVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMW 614
V++G R + K+ L ++++D+ + G D++EK+ EM ++ +W
Sbjct: 486 EDISVKQGQRCHAHLLKL-GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVW 543
Query: 615 SSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAP-YVTMSNIL 656
+SI+++ H + + LF+ + + AP VT ++L
Sbjct: 544 TSIISAYSSHGDFE----TVMNLFHKMIKENVAPDLVTFLSVL 582
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 53/95 (55%)
Query: 74 ISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
+ S+ ++ Y K G + ++++F+ M ++N +T +I YS F LF +M +
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 569
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL 168
PD VTF+++L+ CN M+ +++ + ++++
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV 604
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/606 (32%), Positives = 340/606 (56%), Gaps = 7/606 (1%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y K G ++ A E+F + + V++T+++ GY+KS+ A ++F M SG + + T
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP- 201
+++S C P M+ QVH+ V K G + +LI Y K +DL+ Q+++++
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 202 -QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
QR ++ N +I ++ +AI+LF M G T +F+ ++L LD + G+
Sbjct: 415 IQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGK 470
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTG 320
Q+HGY +K+ L+ ++ VG++L YSK L E+ KLF +P D + MI+ + G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 321 LIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN 380
++E+I LF ++ A +L++ ++ L G+++H + D + + +
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA 440
ALV+MY+KC + A +++ +L V +++IS Q+G ++ LF +M T
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Query: 441 DQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
D +S+LKA+A SLG Q+H+YI + G + GS+L+ MY+K GS+ D + F
Sbjct: 651 DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAF 710
Query: 501 KEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVE 560
++ ++++W ALI++YA +G L+++ M G++PD V+F+ V +ACSH GLVE
Sbjct: 711 SQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Query: 561 EGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
E + NSM K Y + P+ HY +VD L RSG+ +AE I M PD ++W ++L +
Sbjct: 771 ESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Query: 621 CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKV 680
C+IH +L K AA++ +E DA Y+++SNILAE G+W+ V + +K M+ G+ K
Sbjct: 831 CKIHGEVELGKVAAKKAIELEP-SDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Query: 681 PAYSWV 686
P +S V
Sbjct: 890 PGWSSV 895
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/569 (26%), Positives = 289/569 (50%), Gaps = 13/569 (2%)
Query: 74 ISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
+ + +I + K + A ++F + N + +I G ++ + F LF MC
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLA 193
KPD T+ ++L+ C + ++ V + V+K G + V +C +++D Y K + A
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEA 304
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
+++ +P V++ +++GY A+++F EMR G E ++ T +V+ A
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 254 DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS-YNMM 312
+ Q+H + K+ + V AL+ YSK + + ++F + ++ + N+M
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVM 424
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD-LQMGRQLHSQAIVTT 371
IT+++ + ++I LF ++ F ++LS+ LD L +G+Q+H + +
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV----LDCLNLGKQVHGYTLKSG 480
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
++ V ++L +Y+KC EE+ ++F + + W +MIS + G+ E++ LFS
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
EM D + D++T A+VL ++ S+ GK++H Y +R+G + GSALV+MY+KCG
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
SLK A Q++ +PE + VS ++LIS Y+ +G + LF +MV+ G+ DS + +
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
A + G + +TK+ L + +S++ + + G D K +++ PD
Sbjct: 661 AAALSDESSLGAQVHAYITKI-GLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDL 718
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
I W++++ S H + A Q++N+
Sbjct: 719 IAWTALIASYAQHGKAN----EALQVYNL 743
Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/586 (23%), Positives = 299/586 (51%), Gaps = 16/586 (2%)
Query: 44 RSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERN 103
+SN ++ +L +T ++ +A L + + + ++S Y G ++ A ++FD++ + +
Sbjct: 56 QSNSRLCNL-RTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPD 114
Query: 104 AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQ--V 161
V+ ++I GY + F E+ + F +M G + + +++ +++S C+ + LF V
Sbjct: 115 VVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACS--ALQAPLFSELV 172
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFN 221
H +K+G+ ++ ++LID + K + A +++++ + +N +IAG
Sbjct: 173 CCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNY 232
Query: 222 KEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
LF EM +GF+ D +T+ +VL A L+ + FG+ + +K +VFV A
Sbjct: 233 GAVFDLFHEMC-VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTA 290
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
++D Y+K + EA ++F ++P VS+ +M++ Y + ++ +F++++ + +
Sbjct: 291 IVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEIN 350
Query: 341 NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
N +++S + Q+H+ + + VA AL+ MY+K + +E++F
Sbjct: 351 NCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFE 410
Query: 401 KLS--SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASI 458
L R + MI++ Q+ ++++LF+ M ++ + D+ + S+L L +
Sbjct: 411 DLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCL 466
Query: 459 SLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAY 518
+LGKQ+H Y ++SG + + GS+L +Y+KCGSL+++ ++F+ +P ++ W ++IS +
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 519 ASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPK 578
G + LF EM+ G PD + V T CS + G + + T +
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRG-KEIHGYTLRAGIDKG 585
Query: 579 REHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
+ +++V++ + G A ++ +P + D + SS+++ H
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQH 630
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 13 LSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRN 72
L+ ++ S P K I ++ G D + + + G L AR+++D++P +
Sbjct: 558 LTVCSSHPSLPRGKE-IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 73 TISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR 132
+S + +ISGY + G + + F LF M
Sbjct: 617 PVSCSSLISGYSQHGLIQ-------------------------------DGFLLFRDMVM 645
Query: 133 SGTKPDYVTFVTLL--SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
SG D ++L + +D + QVH+++ K+G + + +SL+ Y K +
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSLGA--QVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Query: 191 DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
D + + ++ D + + ALIA YA G EA++++ M++ GF+ TF VL A
Sbjct: 704 DDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA 762
>AT5G44230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17814336-17816309 FORWARD
Length = 657
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 327/593 (55%), Gaps = 38/593 (6%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE--ARKLFYKMPELDGVSYNMMITAYA 317
+QIHG+ ++ L + ++ L+ +K ++ AR++ + + + +I YA
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
G E+I ++ ++ + +F F+ +L M DL +GRQ H+Q V
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSR-------------------CT----------- 407
V N ++DMY KC + A ++F ++ R C
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 408 -VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
V WTAM++ QN +E+L+ F M + + AD+ T A + A A L + +
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 467 YIIRSGFMSS--IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDG 524
+SG+ S + GSAL+DMY+KCG++++A+ +F M +NV +++++I A++G
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 525 EATLKLFEEMVL-LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ L LF MV +P++V+F+ ACSH GLV++G + F+SM + + + P R+HY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVL 643
+VD+L R+G+ +A +LI M +P +W ++L +CRIH N ++A+ AAE LF +E
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEP- 484
Query: 644 RDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKH-KVHIFCANDKNH 702
Y+ +SN+ A AG W V +V+K ++E+GL K PA SWV K+ ++H F + NH
Sbjct: 485 DIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNH 544
Query: 703 PQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPE 762
P +I K++ L E++ GY PD S ++ ++ K L H+E+LA+AF+L++T
Sbjct: 545 PMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNR 604
Query: 763 GSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
S I +MKNLR C DCH +++ S++ G+ I +RD+ RFHHF+ G CSC D+W
Sbjct: 605 DSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 212/469 (45%), Gaps = 66/469 (14%)
Query: 144 TLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV--DLASQLYKEMP 201
+L+S +D + + Q+H HV++ G D + I LI + K+ A ++ + +
Sbjct: 51 SLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ 110
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
R+ + A+I GYA EG EAI ++ MR FTF A+L A + D+ G+Q
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY----- 316
H + V+VGN ++D Y K + + ARK+F +MPE D +S+ +I AY
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 317 -----------------AWTGLI---------KESINLFRKLQFTKYDRRNFPFATMLSL 350
AWT ++ +E++ F +++ + A +S
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 351 AANMLDLQMGRQLHSQAIVTTAD-------SEVLVANALVDMYAKCRRPEEAERIFVKLS 403
A Q+G ++ V A V++ +AL+DMY+KC EEA +F+ ++
Sbjct: 291 CA-----QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGK 462
++ +++MI +G +E+L LF M + + + TF L A ++ + G+
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 463 QLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM---PERNVVSWNALISAY 518
Q+ + ++ G + + +VD+ + G L++A+++ K M P V W AL+ A
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV--WGALLGAC 463
Query: 519 ASNGDGE----ATLKLFEEMVLLGYQPDSVS----FLCVFTACSHWGLV 559
+ + E A LFE +PD + V+ + WG V
Sbjct: 464 RIHNNPEIAEIAAEHLFE------LEPDIIGNYILLSNVYASAGDWGGV 506
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE--A 395
+++ ++++S + ++L +Q+H + D + L+ K P + A
Sbjct: 43 NQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYA 102
Query: 396 ERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
R+ + R WTA+I G F+E++ ++ MR++ +T TF+++LKA +
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 456 ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALI 515
++LG+Q H+ R +Y G+ ++DMY KC S+ A ++F EMPER+V+SW LI
Sbjct: 163 KDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELI 222
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
+AYA G+ E +LFE + D V++ + T + +E L YF+ M K
Sbjct: 223 AAYARVGNMECAAELFESLP----TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 203/506 (40%), Gaps = 93/506 (18%)
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
A+ + + + RN +T +I GY+ +F EA ++ M + P TF LL C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNAL 211
K + Q H+ +L V + N++ID Y K +D A +++ EMP+RD +++ L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 212 IAGYANEGFNKEAIKLF--MEMRDL--------GFETSDFTFQAVLY------AGIGLDD 255
IA YA G + A +LF + +D+ GF + +A+ Y +GI D+
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 256 IAFGQQIHG--------YAVKTTLIW---------NVFVGNALLDFYSKHDCLVEARKLF 298
+ I YA + I +V +G+AL+D YSK + EA +F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 299 YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN---FPFATMLSLAANML 355
M + +Y+ MI A G +E+++LF + + N F A M + ++
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
D GRQ+ T D Y T M+
Sbjct: 402 D--QGRQVFDSMYQTFG------VQPTRDHY------------------------TCMVD 429
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASA--NLASISLGKQLHSYIIRSGF 473
+ G +E+L+L M +V + ++L A N I+ H + +
Sbjct: 430 LLGRTGRLQEALELIKTM---SVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV-----VSW----NALISAY------ 518
+ + L ++YA G +++ K + E+ + VSW N + +
Sbjct: 487 IGNYI---LLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLN 543
Query: 519 --ASNGDGEATLKLFEEMVLLGYQPD 542
SN + +L E + +LGYQPD
Sbjct: 544 HPMSNKIQDKLEELVERLTVLGYQPD 569
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 96/173 (55%), Gaps = 2/173 (1%)
Query: 61 ARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQF 120
AR++FD+MP R+ IS +I+ Y + G + A E+F+S+ ++ V +T ++ G++++ +
Sbjct: 203 ARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKP 262
Query: 121 IEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA--VIICN 178
EA + F RM +SG + D VT +S C K + K G+ + V+I +
Sbjct: 263 QEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGS 322
Query: 179 SLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
+LID Y K V+ A ++ M ++ TY+++I G A G +EA+ LF M
Sbjct: 323 ALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYM 375
>AT1G69350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26069882-26072245 FORWARD
Length = 787
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/629 (32%), Positives = 357/629 (56%), Gaps = 9/629 (1%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y + G LS A+++FD M R+ V ++ L+ ++ + ++A ++F M G +PD VT
Sbjct: 146 YGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTM 205
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS--QLYKEM 200
++++ GC + ++ VH + + D +CNSL+ Y K C DL S ++++++
Sbjct: 206 ISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK--CGDLLSSERIFEKI 263
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
++++V++ A+I+ Y F+++A++ F EM G E + T +VL + + I G+
Sbjct: 264 AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGK 323
Query: 261 QIHGYAVKTTLIWNV-FVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
+HG+AV+ L N + AL++ Y++ L + + + + + V++N +I+ YA
Sbjct: 324 SVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR 383
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA 379
G++ +++ LFR++ + F A+ +S N + +G+Q+H I T E V
Sbjct: 384 GMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQ 442
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
N+L+DMY+K + A +F ++ R V W +M+ QNG+ E++ LF M +
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
++ TF +V++A +++ S+ GK +H +I SG + ++ +AL+DMYAKCG L A +
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETV 561
Query: 500 FKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLV 559
F+ M R++VSW+++I+AY +G + + F +MV G +P+ V F+ V +AC H G V
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 560 EEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILN 619
EEG YFN M K + + P EH+A +D+L RSG +A + I EMPF D +W S++N
Sbjct: 622 EEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
Query: 620 SCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTK 679
CRIH+ D+ K L ++ V D Y +SNI AE G+WE +++ AM+ L K
Sbjct: 681 GCRIHQKMDIIKAIKNDLSDI-VTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKK 739
Query: 680 VPAYSWVEIKHKVHIFCANDKNHPQMKEI 708
VP YS +EI KV F A ++N Q EI
Sbjct: 740 VPGYSAIEIDQKVFRFGAGEENRIQTDEI 768
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 243/496 (48%), Gaps = 7/496 (1%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
R+ + +I Y G ++ +F++ ++ Y +LI A L+ R+
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 131 CRSGTKPDYVTFVTLLSGCNDPK---MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
T+ F ++L C + + G +VH ++K G D +I SL+ Y +
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGG--KVHGRIIKGGVDDDAVIETSLLCMYGQT 149
Query: 188 HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
+ A +++ MP RD V ++ L++ G +A+++F M D G E T +V+
Sbjct: 150 GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVV 209
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV 307
L + + +HG + + + N+LL YSK L+ + ++F K+ + + V
Sbjct: 210 EGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAV 269
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
S+ MI++Y ++++ F ++ + + ++LS + ++ G+ +H A
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 368 IVTTADSEV-LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEES 426
+ D ++ ALV++YA+C + + E + +S R V W ++IS G ++
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA 389
Query: 427 LKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
L LF +M + D T AS + A N + LGKQ+H ++IR+ +S + ++L+DM
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDM 448
Query: 487 YAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
Y+K GS+ A +F ++ R+VV+WN+++ ++ NG+ + LF+ M + + V+F
Sbjct: 449 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTF 508
Query: 547 LCVFTACSHWGLVEEG 562
L V ACS G +E+G
Sbjct: 509 LAVIQACSSIGSLEKG 524
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 169/328 (51%), Gaps = 4/328 (1%)
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML-SLAA 352
+R +F P D Y ++I W L+ +I+L+ +L F F ++L + A
Sbjct: 53 SRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG 112
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ L +G ++H + I D + ++ +L+ MY + +AE++F + R V W+
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
++S+ ++NG ++L++F M D V D T SV++ A L + + + +H I R
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFE 532
F ++L+ MY+KCG L + +IF+++ ++N VSW A+IS+Y E L+ F
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA-SIVDVLCR 591
EM+ G +P+ V+ V ++C GL+ EG + + +L P E + ++V++
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREG-KSVHGFAVRRELDPNYESLSLALVELYAE 351
Query: 592 SGKFDKAEKLIAEMPFDPDEIMWSSILN 619
GK E ++ + D + + W+S+++
Sbjct: 352 CGKLSDCETVLRVVS-DRNIVAWNSLIS 378
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 359/635 (56%), Gaps = 14/635 (2%)
Query: 95 IFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKM 154
+FD M +R++V++ +I GY+ + +A+ LF M RSG+ D +F LL G K
Sbjct: 2 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 61
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAG 214
QVH V+K G++ V + +SL+D Y K V+ A + +KE+ + +SV++NALIAG
Sbjct: 62 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 121
Query: 215 YANEGFNKEAIKLF--MEMRDLGFETSDFTFQAVLYAGIGLDDIAFG---QQIHGYAVKT 269
+ K A L MEM+ TF +L LDD F +Q+H +K
Sbjct: 122 FVQVRDIKTAFWLLGLMEMK-AAVTMDAGTFAPLLTL---LDDPMFCNLLKQVHAKVLKL 177
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP-ELDGVSYNMMITAYAWTGLIKESINL 328
L + + NA++ Y+ + +A+++F + D +S+N MI ++ L + + L
Sbjct: 178 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 237
Query: 329 FRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK 388
F ++Q + + + +LS + G+ LH I + NAL+ MY +
Sbjct: 238 FIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 297
Query: 389 --CRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA 446
E+A +F L S+ + W ++I+ Q G E+++K FS +R + D F+
Sbjct: 298 FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS 357
Query: 447 SVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER 506
++L++ ++LA++ LG+Q+H+ +SGF+S+ + S+L+ MY+KCG ++ A + F+++ +
Sbjct: 358 ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 417
Query: 507 N-VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRY 565
+ V+WNA+I YA +G G+ +L LF +M + D V+F + TACSH GL++EGL
Sbjct: 418 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 477
Query: 566 FNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHK 625
N M VYK+ P+ EHYA+ VD+L R+G +KA++LI MP +PD ++ + L CR
Sbjct: 478 LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACG 537
Query: 626 NQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSW 685
++A + A L +E D YV++S++ ++ +WE VKK M+ERG+ KVP +SW
Sbjct: 538 EIEMATQVANHLLEIEP-EDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSW 596
Query: 686 VEIKHKVHIFCANDKNHPQMKEIILKIDILSEQME 720
+EI+++V F A D+++P ++I + I L+++M+
Sbjct: 597 IEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 631
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 237/487 (48%), Gaps = 47/487 (9%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ ++K G++ + + + + ++ +A E F ++ N++S N +I+G+++
Sbjct: 68 VHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRD 127
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+ A + M + AVT D TF LL+
Sbjct: 128 IKTAFWLLGLMEMKAAVTM------------------------------DAGTFAPLLTL 157
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM-PQRDSVT 207
+DP L QVH+ V+KLG + ICN++I SY V A +++ + +D ++
Sbjct: 158 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 217
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+N++IAG++ + A +LF++M+ ET +T+ +L A G + FG+ +HG +
Sbjct: 218 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 277
Query: 268 KTTLIWNVFVGNALLDFYSKH--DCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKES 325
K L NAL+ Y + + +A LF + D +S+N +IT +A GL +++
Sbjct: 278 KKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 337
Query: 326 INLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDM 385
+ F L+ ++ ++ F+ +L +++ LQ+G+Q+H+ A + S V ++L+ M
Sbjct: 338 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 397
Query: 386 YAKCRRPEEAERIFVKLSSR-CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
Y+KC E A + F ++SS+ TV W AMI Q+G + SL LFS+M NV D T
Sbjct: 398 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVT 457
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYA-------GSALVDMYAKCGSLKDAI 497
F ++L A ++ I G +L + M +Y +A VD+ + G + A
Sbjct: 458 FTAILTACSHTGLIQEGLELLN------LMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 511
Query: 498 QIFKEMP 504
++ + MP
Sbjct: 512 ELIESMP 518
>AT3G13880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4572180-4574426 FORWARD
Length = 748
Score = 353 bits (906), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 340/641 (53%), Gaps = 9/641 (1%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y K +L A+++FD M ERN +++ LI GY++ + +A +LF+ + K D T+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
L C + + +H VV G V + N LID Y K +D A L+ +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG-IGLDD--IAFG 259
RD V++N+LI+GY G +E + L +M G + + +VL A I L++ I G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
IH Y K + +++ V ALLD Y+K+ L EA KLF MP + V+YN MI+ +
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 320 GLI-----KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
I E+ LF +Q + F+ +L + L+ GRQ+H+ S
Sbjct: 332 DEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS 391
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+ + +AL+++YA E+ + F S + WT+MI +VQN E + LF ++
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
++ ++ T + ++ A A+ A++S G+Q+ Y I+SG + ++ + MYAK G++
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
A Q+F E+ +V +++A+IS+ A +G L +FE M G +P+ +FL V AC
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMW 614
H GLV +GL+YF M Y++ P +H+ +VD+L R+G+ AE LI F + W
Sbjct: 572 HGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTW 631
Query: 615 SSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
++L+SCR++K+ + KR AE+L +E + YV + NI ++G S +V++ MR+
Sbjct: 632 RALLSSCRVYKDSVIGKRVAERLMELEP-EASGSYVLLHNIYNDSGVNSSAEEVRELMRD 690
Query: 675 RGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDIL 715
RG+ K PA SW+ I ++ H F D +HP + I ++ +
Sbjct: 691 RGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 248/481 (51%), Gaps = 18/481 (3%)
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFN 221
H H++K + + + N+L++ YCK + A QL+ MP+R+ +++N+LI+GY GF
Sbjct: 70 HGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFY 129
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNAL 281
++A++LF+E R+ + FT+ L D+ G+ +HG V L VF+ N L
Sbjct: 130 EQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVL 189
Query: 282 LDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN 341
+D YSK L +A LF + E D VS+N +I+ Y G +E +NL K+ +
Sbjct: 190 IDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTT 249
Query: 342 FPFATMLSLAANMLD---LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ ++L L+ ++ G +H + +++V AL+DMYAK +EA ++
Sbjct: 250 YALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKL 309
Query: 399 FVKLSSRCTVPWTAMISANVQNGHF-----EESLKLFSEMRRDNVTADQATFASVLKASA 453
F + S+ V + AMIS +Q E+ KLF +M+R + +TF+ VLKA +
Sbjct: 310 FSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACS 369
Query: 454 NLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNA 513
++ G+Q+H+ I ++ F S + GSAL+++YA GS +D +Q F ++++ SW +
Sbjct: 370 AAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTS 429
Query: 514 LISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVY 573
+I + N E+ LF ++ +P+ + + +AC+ + + G + Y
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG-----EQIQGY 484
Query: 574 KLVPKREHYASI----VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
+ + + S+ + + +SG A ++ E+ +PD +S++++S H + +
Sbjct: 485 AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSANE 543
Query: 630 A 630
A
Sbjct: 544 A 544
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 166/315 (52%), Gaps = 8/315 (2%)
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G+ HG+ +K++L +++ N LL+ Y K L AR+LF +MPE + +S+N +I+
Sbjct: 63 VVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISG 122
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
Y G ++++ LF + + F +A L DL +G LH +V +
Sbjct: 123 YTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ 182
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
V + N L+DMY+KC + ++A +F + R V W ++IS V+ G EE L L ++M R
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 436 DNVTADQATFASVLKA---SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
D + SVLKA + N I G +H Y + G I +AL+DMYAK GS
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 493 LKDAIQIFKEMPERNVVSWNALISAY-----ASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
LK+AI++F MP +NVV++NA+IS + ++ KLF +M G +P +F
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362
Query: 548 CVFTACSHWGLVEEG 562
V ACS +E G
Sbjct: 363 VVLKACSAAKTLEYG 377
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 220/483 (45%), Gaps = 59/483 (12%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
+ G+L +A LFD+ R+ +S N +ISGY++ G A E
Sbjct: 195 KCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVG----AAE------------------- 231
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGC----NDPKMIKGLFQVHSHVVKLG 169
E L +M R G ++L C N+ + KG+ +H + KLG
Sbjct: 232 --------EPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM-AIHCYTAKLG 282
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGY-----ANEGFNKEA 224
+ +++ +L+D Y K + A +L+ MP ++ VTYNA+I+G+ + + EA
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 225 IKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDF 284
KLFM+M+ G E S TF VL A + +G+QIH K + F+G+AL++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 285 YSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPF 344
Y+ + + F + D S+ MI + ++ + +LFR+L + +
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTV 462
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
+ M+S A+ L G Q+ AI + D+ V + + MYAK A ++F+++ +
Sbjct: 463 SLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN 522
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL 464
++AMIS+ Q+G E+L +F M+ + +Q F VL A + ++ G +
Sbjct: 523 PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKY 582
Query: 465 -----HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI-----FKEMPERNVVSWNAL 514
+ Y I + LVD+ + G L DA + F++ P V+W AL
Sbjct: 583 FQCMKNDYRINPNEKHF----TCLVDLLGRTGRLSDAENLILSSGFQDHP----VTWRAL 634
Query: 515 ISA 517
+S+
Sbjct: 635 LSS 637
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 136/269 (50%), Gaps = 10/269 (3%)
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
+ + AA + +G+ H I ++ + + + N L++MY KCR A ++F ++
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
R + + ++IS Q G +E++++LF E R N+ D+ T+A L + LG+
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
LH ++ +G ++ + L+DMY+KCG L A+ +F ER+ VSWN+LIS Y G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACS---HWGLVEEGLR---YFNSMTKVYKLVP 577
E L L +M G + + V AC + G +E+G+ Y + + +V
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV 289
Query: 578 KREHYASIVDVLCRSGKFDKAEKLIAEMP 606
+ +++D+ ++G +A KL + MP
Sbjct: 290 R----TALLDMYAKNGSLKEAIKLFSLMP 314
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
N D + + + +A S+ LGK H ++I+S +Y + L++MY KC L A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH- 555
Q+F MPERN++S+N+LIS Y G E ++LF E + D ++ C
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 556 ----WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
G + GL N +++ L+ ++D+ + GK D+A L + D+
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLIN------VLIDMYSKCGKLDQAMSLFDRCD-ERDQ 214
Query: 612 IMWSSILN 619
+ W+S+++
Sbjct: 215 VSWNSLIS 222
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 349 bits (895), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 326/590 (55%), Gaps = 22/590 (3%)
Query: 142 FVTLLSGC---NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
F+ LL C N + I+ +HS V N LI ++ + +S L+
Sbjct: 36 FLFLLKKCISVNQLRQIQAQMLLHS----------VEKPNFLIPKAVELGDFNYSSFLFS 85
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEA-IKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
+ + ++N +I G N + EA + L+ M+ G + FT+ V A L++I
Sbjct: 86 VTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 145
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA 317
G+ +H K L +V + ++L+ Y+K + ARKLF ++ E D VS+N MI+ Y+
Sbjct: 146 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 205
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
G K++++LFRK++ ++ +ML +++ DL+ GR L AI
Sbjct: 206 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 265
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
+ + L+ MY KC + A R+F ++ + V WTAMI+ QNG E+ KLF EM +
Sbjct: 266 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 325
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
V+ D T ++VL A ++ ++ LGKQ+ ++ +IY + LVDMY KCG +++A+
Sbjct: 326 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 385
Query: 498 QIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWG 557
++F+ MP +N +WNA+I+AYA G + L LF+ M + P ++F+ V +AC H G
Sbjct: 386 RVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSV---PPSDITFIGVLSACVHAG 442
Query: 558 LVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSI 617
LV +G RYF+ M+ ++ LVPK EHY +I+D+L R+G D+A + + P PDEIM ++I
Sbjct: 443 LVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAI 502
Query: 618 LNSCRIHKNQDLAKR--AAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
L +C HK +D+A R A L M+ ++A YV SN+LA+ W+ K++ MR+R
Sbjct: 503 LGAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDR 560
Query: 676 GLTKVPAYSWVEIKHKVHIFCA-NDKNHPQMKEIILKIDILSEQMEKEGY 724
G+ K P SW+EI+ ++ F A +D ++ D+L E+M++E Y
Sbjct: 561 GVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRERY 610
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 228/449 (50%), Gaps = 5/449 (1%)
Query: 58 LSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKS 117
+++ R++ QM + N +I ++ G + + +F E N ++ +I G + +
Sbjct: 46 VNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNT 105
Query: 118 -DQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVII 176
+ A L+ RM SG KPD T+ + C + I VHS + K+G + V I
Sbjct: 106 WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHI 165
Query: 177 CNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGF 236
+SLI Y K V A +L+ E+ +RD+V++N++I+GY+ G+ K+A+ LF +M + GF
Sbjct: 166 NHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGF 225
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
E + T ++L A L D+ G+ + A+ + + F+G+ L+ Y K L AR+
Sbjct: 226 EPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARR 285
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
+F +M + D V++ MIT Y+ G E+ LF +++ T +T+LS ++
Sbjct: 286 VFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA 345
Query: 357 LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA 416
L++G+Q+ + A + + VA LVDMY KC R EEA R+F + + W AMI+A
Sbjct: 346 LELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 405
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG-KQLHSYIIRSGFMS 475
GH +E+L LF M +V TF VL A + + G + H G +
Sbjct: 406 YAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP 462
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
I + ++D+ ++ G L +A + + P
Sbjct: 463 KIEHYTNIIDLLSRAGMLDEAWEFMERFP 491
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 153/323 (47%), Gaps = 35/323 (10%)
Query: 18 AKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSN 77
AK V + + + K G + ++ IM + GQ+ AR+LFD++ R+T+S N
Sbjct: 139 AKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWN 198
Query: 78 VMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKP 137
MISGY + GY+K +A LF +M G +P
Sbjct: 199 SMISGYSE--------------------------AGYAK-----DAMDLFRKMEEEGFEP 227
Query: 138 DYVTFVTLLSGCNDPKMIKG--LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
D T V++L C+ ++ L + + K+G + + + LI Y K +D A +
Sbjct: 228 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG--LSTFLGSKLISMYGKCGDLDSARR 285
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ +M ++D V + A+I Y+ G + EA KLF EM G T VL A +
Sbjct: 286 VFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA 345
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G+QI +A + +L N++V L+D Y K + EA ++F MP + ++N MITA
Sbjct: 346 LELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 405
Query: 316 YAWTGLIKESINLFRKLQFTKYD 338
YA G KE++ LF ++ D
Sbjct: 406 YAHQGHAKEALLLFDRMSVPPSD 428
>AT4G15720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8949569-8951419 FORWARD
Length = 616
Score = 349 bits (895), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 327/576 (56%), Gaps = 18/576 (3%)
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+ AF +H +K + F N L+ Y K + ARKLF +M E + VS+ +I+
Sbjct: 44 NAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVIS 103
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
Y G + ++++F+K+ + N + FA++ + + + ++G+ +H++ ++
Sbjct: 104 GYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR 163
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKL--SSRCTVPWTAMISANVQNGHFEESLKLFS 431
++V+++LVDMY KC E A R+F + R V WT+MI+A QN E+++LF
Sbjct: 164 RNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR 223
Query: 432 EMRRDNVT--ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAK 489
+ A+Q ASV+ A ++L + GK H + R G+ S+ ++L+DMYAK
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAK 283
Query: 490 CGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCV 549
CGSL A +IF + +V+S+ ++I A A +G GEA +KLF+EMV P+ V+ L V
Sbjct: 284 CGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGV 343
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL--IAEMPF 607
ACSH GLV EGL Y + M + Y +VP HY +VD+L R G+ D+A +L E+
Sbjct: 344 LHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGA 403
Query: 608 DPDEIMWSSILNSCRIHKNQDLAKRAAEQLF--NMEVLRDAAPYVTMSNILAEAGQWESV 665
+ ++W ++L++ R+H ++ A+++L N +V + Y+ +SN A +G WE
Sbjct: 404 EQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQV---TSAYIALSNAYAVSGGWEDS 460
Query: 666 GKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGY- 724
++ M+ G K A SW+E K V++F A D + + EI + L ++M++ G+
Sbjct: 461 ESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHR 520
Query: 725 -----VPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCH 779
+ +S + DE+ K E + H ERLA+A+ L+ P GS I +M NLR C DCH
Sbjct: 521 GSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCH 580
Query: 780 AAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
A K+IS+IV REI VRD +RFH FK+G C+CRDYW
Sbjct: 581 EAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 194/374 (51%), Gaps = 9/374 (2%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
+H+ +KLG S N L+ SY K+ ++ A +L+ EM + + V++ ++I+GY + G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 221 NKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
+ A+ +F +M D +++TF +V A L + G+ IH + L N+ V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 280 ALLDFYSKHDCLVEARKLFYKMPEL--DGVSYNMMITAYAWTGLIKESINLFRKLQFT-K 336
+L+D Y K + + AR++F M + VS+ MITAYA E+I LFR
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 337 YDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEA 395
DR N F A+++S +++ LQ G+ H +S +VA +L+DMYAKC A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 396 ERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
E+IF+++ + +T+MI A ++G E ++KLF EM + + T VL A ++
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 456 ASISLGKQLHSYII-RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM---PERNVVSW 511
++ G + S + + G + + +VDM + G + +A ++ K + E+ + W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 512 NALISAYASNGDGE 525
AL+SA +G E
Sbjct: 411 GALLSAGRLHGRVE 424
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 189/440 (42%), Gaps = 51/440 (11%)
Query: 34 VKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAK 93
+K GF T N+ ++ V+ +++ AR+LFD+M N +S +ISGY GK A
Sbjct: 56 LKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNAL 115
Query: 94 EIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPK 153
+F M E V P+ TF ++ C+
Sbjct: 116 SMFQKMHEDRPV------------------------------PPNEYTFASVFKACSALA 145
Query: 154 MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP--QRDSVTYNAL 211
+ +H+ + G +++ +SL+D Y K + V+ A +++ M R+ V++ ++
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 212 IAGYANEGFNKEAIKLFMEMRDLGFETSD----FTFQAVLYAGIGLDDIAFGQQIHGYAV 267
I YA EAI+LF TSD F +V+ A L + +G+ HG
Sbjct: 206 ITAYAQNARGHEAIELFRSFN--AALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVT 263
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
+ N V +LLD Y+K L A K+F ++ +SY MI A A GL + ++
Sbjct: 264 RGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVK 323
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ---LHSQAIVTTADSEVLVANALVD 384
LF ++ + + +L ++ + G + L ++ DS +VD
Sbjct: 324 LFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYT--CVVD 381
Query: 385 MYAKCRRPEEAERIFVKL---SSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
M + R +EA + + + + + W A++SA +G E + SE + + ++
Sbjct: 382 MLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVE----IVSEASKRLIQSN 437
Query: 442 QATFASVLKASANLASISLG 461
Q ++ + A +N ++S G
Sbjct: 438 QQVTSAYI-ALSNAYAVSGG 456
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 348 bits (893), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 192/609 (31%), Positives = 341/609 (55%), Gaps = 12/609 (1%)
Query: 82 GYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVT 141
GY K+ +L +FD + E + + +++ Y + + +E KL+ + + G + D +
Sbjct: 90 GYTKDARL-----VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 142 FVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
F L C + + + ++H +VK+ V++ L+D Y K + A +++ ++
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
R+ V + ++IAGY +E + LF MR+ +++T+ ++ A L + G+
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
HG VK+ + + + +LLD Y K + AR++F + +D V + MI Y G
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI-VTTADSEVLVAN 380
+ E+++LF+K++ + A++LS + +L++GR +H +I V D+ V AN
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV--AN 381
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA 440
ALV MYAKC + +A+ +F S + V W ++IS QNG E+L LF M ++VT
Sbjct: 382 ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 441 DQATFASVLKASANLASISLGKQLHSYIIRSGFM--SSIYAGSALVDMYAKCGSLKDAIQ 498
+ T AS+ A A+L S+++G LH+Y ++ GF+ SS++ G+AL+D YAKCG + A
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARL 501
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
IF + E+N ++W+A+I Y GD +L+LFEEM+ +P+ +F + +AC H G+
Sbjct: 502 IFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
V EG +YF+SM K Y P +HY +VD+L R+G+ ++A +I +MP PD + + L
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
+ C +H DL + +++ ++ DA+ YV +SN+ A G+W +V+ M++RGL+
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHP-DDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLS 680
Query: 679 KVPAYSWVE 687
K+ +S +E
Sbjct: 681 KIAGHSTME 689
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 244/482 (50%), Gaps = 19/482 (3%)
Query: 77 NVMISG----YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR 132
NV+++G Y K G++ A ++F+ + RN V +T +I GY K+D E LF RM
Sbjct: 176 NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE 235
Query: 133 SGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
+ + T+ TL+ C + H +VK G + + + SL+D Y K +
Sbjct: 236 NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISN 295
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
A +++ E D V + A+I GY + G EA+ LF +M+ + + + T +VL +G G
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL-SGCG 354
Query: 253 L-DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
L +++ G+ +HG ++K IW+ V NAL+ Y+K +A+ +F E D V++N
Sbjct: 355 LIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
+I+ ++ G I E++ LF ++ A++ S A++ L +G LH+ ++
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 372 --ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKL 429
A S V V AL+D YAKC P+ A IF + + T+ W+AMI + G SL+L
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLEL 533
Query: 430 FSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYA 488
F EM + +++TF S+L A + ++ GK+ S + + F S + +VDM A
Sbjct: 534 FEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLA 593
Query: 489 KCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGD---GEATLKLFEEMVLLGYQPDSV 544
+ G L+ A+ I ++MP + +V + A + + GE +K +L PD
Sbjct: 594 RAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIK-----KMLDLHPDDA 648
Query: 545 SF 546
S+
Sbjct: 649 SY 650
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 150/591 (25%), Positives = 259/591 (43%), Gaps = 29/591 (4%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
LLS C + I L Q H + G + I L+ Y A ++ ++P+ D
Sbjct: 50 LLSKCTN---IDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
+ ++ Y + E +KL+ + GF D F L A L D+ G++IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
VK NV + LLD Y+K + A K+F + + V + MI Y L +E
Sbjct: 167 QLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
+ LF +++ + + T++ + L G+ H + + + + +L+D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
MY KC A R+F + S V WTAMI NG E+L LF +M+ + + T
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
ASVL + ++ LG+ +H I+ G + A +ALV MYAKC +DA +F+
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA-NALVHMYAKCYQNRDAKYVFEMES 404
Query: 505 ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLR 564
E+++V+WN++IS ++ NG L LF M P+ V+ +F+AC+ G + G
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 565 YFNSMTKVYKLVPKREHYAS-IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRI 623
K+ L H + ++D + G ++ +LI + + + I WS+++
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGD-PQSARLIFDTIEEKNTITWSAMIGG--Y 521
Query: 624 HKNQDLAKRAAEQLFNMEVLRDAAPY-VTMSNILAEAGQWESVGKVKKAMRERGLTKVPA 682
K D + +LF + + P T ++IL+ G V + KK
Sbjct: 522 GKQGDTI--GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKK------------ 567
Query: 683 YSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQM---EKEGYVPDTSC 730
+ +K + F + K++ M +++ + L + + EK PD C
Sbjct: 568 --YFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRC 616
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+T +N ++ Y K + AK +F+ E++ V + +I G+S++ EA LF RM
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGH--DSAVIICNSLIDSYCKMHC 189
P+ VT +L S C + +H++ VKLG S+V + +L+D Y K
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
A ++ + +++++T++A+I GY +G +++LF EM + ++ TF ++L A
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 348/662 (52%), Gaps = 22/662 (3%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAV-TYTLLIGGYSKSDQFIEAFKLFVR 129
R+ + +I+ Y A+ +F++ R+ V + L+ GYSK+ F + ++F R
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 130 MCR-SGTKPDYVTFVTLLSGCNDPKMIKGLF---------QVHSHVVKLGHDSAVIICNS 179
+ S PD TF P +IK +H+ VVK G+ V++ +S
Sbjct: 97 LLNCSICVPDSFTF---------PNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASS 147
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
L+ Y K + + + Q++ EMP+RD ++N +I+ + G ++A++LF M GFE +
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY 299
+ + A L + G++IH VK + +V +AL+D Y K DCL AR++F
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
KMP V++N MI Y G K + + ++ ++L + +L
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLH 327
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQ 419
G+ +H I + ++++ V +L+D+Y KC AE +F K W MIS+ +
Sbjct: 328 GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYIS 387
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
G++ ++++++ +M V D TF SVL A + LA++ GKQ+H I S +
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELL 447
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
SAL+DMY+KCG+ K+A +IF +P+++VVSW +ISAY S+G L F+EM G
Sbjct: 448 LSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
+PD V+ L V +AC H GL++EGL++F+ M Y + P EHY+ ++D+L R+G+ +A
Sbjct: 508 KPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY 567
Query: 600 KLIAEMPFDPDEI-MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
++I + P D + S++ ++C +H L R A L DA+ Y+ + N+ A
Sbjct: 568 EIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVE-NYPDDASTYMVLFNLYAS 626
Query: 659 AGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQ 718
W++ +V+ M+E GL K P SW+E+ KV F A D++H + + + + +LS
Sbjct: 627 GESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGH 686
Query: 719 ME 720
ME
Sbjct: 687 ME 688
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 268/525 (51%), Gaps = 12/525 (2%)
Query: 142 FVTLLSGC-NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY--CKMHCVDLASQLYK 198
++LL C N K ++ + VH ++ LG V++C SLI+ Y CK HC A +++
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCS--ARHVFE 63
Query: 199 EMPQRDSV-TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDI 256
R V +N+L++GY+ + +++F + + D FTF V+ A L
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G+ IH VK+ + +V V ++L+ Y+K + + ++F +MPE D S+N +I+ +
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
+G ++++ LF +++ + ++ + +S + +L L+ G+++H + + + +
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
V +ALVDMY KC E A +F K+ + V W +MI V G + +++ + M +
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
Q T S+L A + ++ GK +H Y+IRS + IY +L+D+Y KCG A
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
+F + + SWN +IS+Y S G+ ++++++MV +G +PD V+F V ACS
Sbjct: 364 ETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
+E+G + S+++ +L ++++D+ + G +A ++ +P D + W+
Sbjct: 424 AALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTV 481
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
++++ H + A Q M+ VT+ +L+ G
Sbjct: 482 MISAYGSHGQ---PREALYQFDEMQKFGLKPDGVTLLAVLSACGH 523
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 153/307 (49%), Gaps = 35/307 (11%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLV-QTGQLSEARELFDQMPYRNTISSNVMISGYLKEG 87
I + VK GF+ N ++D+ + L ARE+F +MP ++ ++ N MI GY+ +G
Sbjct: 230 IHRKCVKKGFELD-EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG 288
Query: 88 KLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
EI + M+ IE GT+P T ++L
Sbjct: 289 DSKSCVEILNRMI--------------------IE-----------GTRPSQTTLTSILM 317
Query: 148 GCNDPK-MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
C+ + ++ G F +H +V++ ++ + + SLID Y K +LA ++ + + +
Sbjct: 318 ACSRSRNLLHGKF-IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE 376
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
++N +I+ Y + G +A++++ +M +G + TF +VL A L + G+QIH
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
++ L + + +ALLD YSK EA ++F +P+ D VS+ +MI+AY G +E++
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREAL 496
Query: 327 NLFRKLQ 333
F ++Q
Sbjct: 497 YQFDEMQ 503
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/616 (32%), Positives = 332/616 (53%), Gaps = 9/616 (1%)
Query: 99 MVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGL 158
M +R+ + L+ S+ Q+ E F M R KPD T L C + + +
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 159 FQVHSHV---VKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGY 215
+H V V LG D + + +SLI Y K + A +++ E+ + D VT++++++G+
Sbjct: 61 EMIHGFVKKDVTLGSD--LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGF 118
Query: 216 ANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWN 274
G +A++ F M T D T ++ A L + G+ +HG+ ++ +
Sbjct: 119 EKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSND 178
Query: 275 VFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQF 334
+ + N+LL+ Y+K EA LF + E D +S++ +I Y G E++ +F +
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 238
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
+ +L A DL+ GR+ H AI ++EV V+ ALVDMY KC PEE
Sbjct: 239 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 298
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT-ADQATFASVLKASA 453
A +F ++ + V W A+IS NG S++ FS M +N T D VL + +
Sbjct: 299 AYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCS 358
Query: 454 NLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNA 513
L + K HSY+I+ GF S+ + G++LV++Y++CGSL +A ++F + ++ V W +
Sbjct: 359 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 418
Query: 514 LISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
LI+ Y +G G L+ F MV +P+ V+FL + +ACSH GL+ EGLR F M
Sbjct: 419 LITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVND 478
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
Y+L P EHYA +VD+L R G D A ++ MPF P + ++L +CRIH+N ++A+
Sbjct: 479 YRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAET 538
Query: 633 AAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKV 692
A++LF +E A Y+ MSN+ G+WE+V K++ ++++RG+ K A S +EI+ KV
Sbjct: 539 VAKKLFELES-NHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKV 597
Query: 693 HIFCANDKNHPQMKEI 708
H F A+D+ HP+ + +
Sbjct: 598 HRFVADDELHPEKEPV 613
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 215/430 (50%), Gaps = 4/430 (0%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC-RSGTKP 137
+I Y+K G++ A +FD + + + VT++ ++ G+ K+ +A + F RM S P
Sbjct: 83 LIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP 142
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
D VT +TL+S C + VH V++ G + + + NSL++ Y K A L+
Sbjct: 143 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 202
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
K + ++D ++++ +IA Y G EA+ +F +M D G E + T VL A D+
Sbjct: 203 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 262
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA 317
G++ H A++ L V V AL+D Y K EA +F ++P D VS+ +I+ +
Sbjct: 263 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 322
Query: 318 WTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
G+ SI F + R + +L + + L+ + HS I DS
Sbjct: 323 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 382
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM-RR 435
+ +LV++Y++C A ++F ++ + TV WT++I+ +G ++L+ F+ M +
Sbjct: 383 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 442
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS-SIYAGSALVDMYAKCGSLK 494
V ++ TF S+L A ++ I G ++ ++ ++ ++ + LVD+ + G L
Sbjct: 443 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 502
Query: 495 DAIQIFKEMP 504
AI+I K MP
Sbjct: 503 TAIEITKRMP 512
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 123/261 (47%), Gaps = 9/261 (3%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +++ Y K A +F + E++ ++++ +I Y ++ EA +F M GT+
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 242
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
P+ T + +L C ++ + H ++ G ++ V + +L+D Y K + A +
Sbjct: 243 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI--GLD 254
+ +P++D V++ ALI+G+ G +I+ F M ++ A+L +
Sbjct: 303 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM----LLENNTRPDAILMVKVLGSCS 358
Query: 255 DIAFGQQ---IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
++ F +Q H Y +K N F+G +L++ YS+ L A K+F + D V +
Sbjct: 359 ELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTS 418
Query: 312 MITAYAWTGLIKESINLFRKL 332
+IT Y G +++ F +
Sbjct: 419 LITGYGIHGKGTKALETFNHM 439
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/606 (32%), Positives = 325/606 (53%), Gaps = 39/606 (6%)
Query: 245 AVLYAGIGLDDIAFGQQIHG-YAVKTTLIWNVFVGNALLDF-YSKHDCLVEARKLFYKMP 302
A+L +GI ++ +QIH V TL + VG+ + S H L A ++ +
Sbjct: 11 ALLDSGITFKEV---RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSE 67
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR--NFPFATMLSLAANMLDLQMG 360
+ + N MI A+ + + ++S + +R++ + D + N+ ++ + + G
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAK----------------------------CRRP 392
Q+H I D++ V L+ +YA+ C R
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 393 EE---AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
+ A ++F + R + W AMIS Q G E+L +F M+ + V + SVL
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV 509
A L ++ G+ HSYI R+ ++ + LVD+YAKCG ++ A+++F M E+NV
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 510 SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
+W++ ++ A NG GE L+LF M G P++V+F+ V CS G V+EG R+F+SM
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
+ + P+ EHY +VD+ R+G+ + A +I +MP P +WSS+L++ R++KN +L
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 630 AKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIK 689
A++++ +E A YV +SNI A++ W++V V+++M+ +G+ K P S +E+
Sbjct: 428 GVLASKKMLELETANHGA-YVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 486
Query: 690 HKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSE 749
+VH F DK+HP+ +I +S ++ GY DT+ + + DE+ K ++L HSE
Sbjct: 487 GEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSE 546
Query: 750 RLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGIC 809
+ AIAF ++S E PI ++KNLR C DCH +ISKI REI VRD +RFHHFKDG C
Sbjct: 547 KAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHC 606
Query: 810 SCRDYW 815
SC +W
Sbjct: 607 SCNGFW 612
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 164/364 (45%), Gaps = 37/364 (10%)
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG--FETSDFTFQAVL 247
+D A+Q+ + N++I + +++ + + G + ++T ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL---------------- 291
A GL G Q+HG ++ + V L+ Y++ CL
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 292 ---------------VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK 336
V ARKLF MPE D +++N MI+ YA G +E++N+F +Q
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 337 YDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAE 396
++LS + L GR HS V +A LVD+YAKC E+A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 397 RIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA 456
+F + + W++ ++ NG E+ L+LFS M++D VT + TF SVL+ + +
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 457 SISLGKQLHSYIIRS--GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNA 513
+ G Q H +R+ G + LVD+YA+ G L+DA+ I ++MP + + W++
Sbjct: 356 FVDEG-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 514 LISA 517
L+ A
Sbjct: 415 LLHA 418
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 172/401 (42%), Gaps = 41/401 (10%)
Query: 58 LSEARELFDQMPYRNTISSNVMISGYLKEGKLS------IAKEIFDSMVERNAVTYTLLI 111
E R++ ++ T+ + ++ ++K LS A +I D + +I
Sbjct: 19 FKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 112 GGYSKSDQFIEAFKLFVRMCRSGT--KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
+ KS ++F + R+ SG KPD T L+ C +M + QVH ++ G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 170 HDSAVIICNSLIDSYCKMHCVD-------------------------------LASQLYK 198
D+ + LI Y ++ C+D A +L++
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
MP+RD + +NA+I+GYA G ++EA+ +F M+ G + + +VL A L +
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G+ H Y + + V + L+D Y+K + +A ++F+ M E + +++ + A
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG-RQLHSQAIVTTADSEVL 377
G ++ + LF ++ F ++L + + + G R S + ++
Sbjct: 319 NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLE 378
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMISAN 417
LVD+YA+ R E+A I ++ + W++++ A+
Sbjct: 379 HYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHAS 419
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 147/326 (45%), Gaps = 29/326 (8%)
Query: 25 VKTCIDARIVKTGFDPS--TSRSNYQIMDLVQTGQLSEAREL---------FDQMPYRNT 73
V+ C R+ +TG T R + VQTG +S EL F+ +P +
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 74 ISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
+ M++ + G + A+++F+ M ER+ + + +I GY++ + EA +F M
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLA 193
G K + V +++LS C + HS++ + V + +L+D Y K ++ A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG--I 251
+++ M +++ T+++ + G A GF ++ ++LF M+ G + TF +VL +
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 252 GLDDIA---FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
G D F + + ++ L L+D Y++ L +A + +MP
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHY----GCLVDLYARAGRLEDAVSIIQQMP------ 404
Query: 309 YNMMITAYAWTGLIKESINLFRKLQF 334
M A W+ L+ S +++ L+
Sbjct: 405 --MKPHAAVWSSLLHAS-RMYKNLEL 427
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 314/599 (52%), Gaps = 4/599 (0%)
Query: 121 IEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSL 180
+E+ LF M R G +P+ TF + C + VH+H++K S V + +
Sbjct: 34 VESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 181 IDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
+D + K + VD A+++++ MP+RD+ T+NA+++G+ G +A LF EMR
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 241 FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYK 300
T ++ + + + +H ++ + V V N + Y K L A+ +F
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 301 MPELDG--VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
+ D VS+N M AY+ G ++ L+ + ++ F + + N L
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLT 273
Query: 359 MGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANV 418
GR +HS AI D ++ N + MY+K A +F ++SR V WT MIS
Sbjct: 274 QGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI-IRSGFMSSI 477
+ G +E+L LF M + D T S++ S+ GK + + I ++
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLL 537
+AL+DMY+KCGS+ +A IF PE+ VV+W +I+ YA NG LKLF +M+ L
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 538 GYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDK 597
Y+P+ ++FL V AC+H G +E+G YF+ M +VY + P +HY+ +VD+L R GK ++
Sbjct: 454 DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEE 513
Query: 598 AEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILA 657
A +LI M PD +W ++LN+C+IH+N +A++AAE LFN+E + AAPYV M+NI A
Sbjct: 514 ALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP-QMAAPYVEMANIYA 572
Query: 658 EAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILS 716
AG W+ +++ M++R + K P S +++ K H F + H + + I ++ LS
Sbjct: 573 AAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 206/416 (49%), Gaps = 9/416 (2%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+N I N E++ LF EM+ GFE ++FTF V A L D+ + +H + +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
K+ +VFVG A +D + K + + A K+F +MPE D ++N M++ + +G ++ +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
LFR+++ + + T++ A+ L++ +H+ I D +V VAN + Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 388 KCRRPEEAERIF--VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATF 445
KC + A+ +F + R V W +M A G ++ L+ M R+ D +TF
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 446 ASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
++ + N +++ G+ +HS+ I G I A + + MY+K A +F M
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRY 565
R VSW +IS YA GD + L LF M+ G +PD V+ L + + C +G +E G ++
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KW 378
Query: 566 FNSMTKVYKLVPKREHYA---SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
++ +Y KR++ +++D+ + G +A + P + + W++++
Sbjct: 379 IDARADIYGC--KRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMI 431
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 263/543 (48%), Gaps = 33/543 (6%)
Query: 1 MKLLHRKI-PLKNLSSLAAKN---------SYPNVKTCIDARIVKTGFDPST------SR 44
M L+HR++ + LSS+ A N + P + + + GF+P+ ++
Sbjct: 1 MSLIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAK 60
Query: 45 SNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNA 104
+ ++ D V ++ A L + + + ++K + A ++F+ M ER+A
Sbjct: 61 ACARLAD-VGCCEMVHAH-LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDA 118
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSH 164
T+ ++ G+ +S +AF LF M + PD VT +TL+ + K +K L +H+
Sbjct: 119 TTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAV 178
Query: 165 VVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS--VTYNALIAGYANEGFNK 222
++LG D V + N+ I +Y K +D A +++ + + D V++N++ Y+ G
Sbjct: 179 GIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF 238
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALL 282
+A L+ M F+ TF + + + + G+ IH +A+ ++ N +
Sbjct: 239 DAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFI 298
Query: 283 DFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNF 342
YSK + AR LF M VS+ +MI+ YA G + E++ LF + +
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 343 PFATMLSLAANMLDLQMGRQLHSQA-IVTTADSEVLVANALVDMYAKCRRPEEAERIFVK 401
+++S L+ G+ + ++A I V++ NAL+DMY+KC EA IF
Sbjct: 359 TLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418
Query: 402 LSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
+ V WT MI+ NG F E+LKLFS+M + + TF +VL+A A+ S+ G
Sbjct: 419 TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 462 KQLHSYIIRSGFMSSIYAG----SALVDMYAKCGSLKDAIQIFKEM---PERNVVSWNAL 514
+ + +I++ + +I G S +VD+ + G L++A+++ + M P+ + W AL
Sbjct: 479 WE-YFHIMKQVY--NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGI--WGAL 533
Query: 515 ISA 517
++A
Sbjct: 534 LNA 536
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 215/664 (32%), Positives = 347/664 (52%), Gaps = 58/664 (8%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLK-EGKLSIAKEIFDSMVERNAVTYTLLIG 112
+ G++S+A ++FD+MP R T S N MI+ +K + L A E+F + E+NAV+Y +I
Sbjct: 93 ENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMIT 152
Query: 113 GYSKSDQFIEAFKLFVRMCRSGTKP----DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL 168
G+ ++ +F EA L+ P D V LLSG + G + V +
Sbjct: 153 GFVRAGRFDEAEFLYAE------TPVKFRDSVASNVLLSG----YLRAGKWNEAVRVFQG 202
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF 228
V+ C+S++ YCKM + A L+ M +R+ +T+ A+I GY GF ++ LF
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 229 MEMRDLGFETSDFTFQAVLYAGIGLDDIAF--GQQIHGYAVKTTLIWNVFVGNALLDFYS 286
+ MR G + AV++ D + + G QIHG + L +++F+GN+L+ YS
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKAC-RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 287 KHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFAT 346
K + EA+ +F M D VS+N +IT I E+ LF K+ P
Sbjct: 322 KLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----------PGKD 371
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
M+S +M+ G+ S+ + +F + +
Sbjct: 372 MVSWT-DMIKGFSGKGEISKCV----------------------------ELFGMMPEKD 402
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
+ WTAMISA V NG++EE+L F +M + V + TF+SVL A+A+LA + G Q+H
Sbjct: 403 NITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHG 462
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
+++ ++ + ++LV MY KCG+ DA +IF + E N+VS+N +IS Y+ NG G+
Sbjct: 463 RVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKK 522
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
LKLF + G +P+ V+FL + +AC H G V+ G +YF SM Y + P +HYA +V
Sbjct: 523 ALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMV 582
Query: 587 DVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDA 646
D+L RSG D A LI+ MP P +W S+L++ + H DLA+ AA++L +E A
Sbjct: 583 DLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEP-DSA 641
Query: 647 APYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMK 706
PYV +S + + G+ ++ + + + K P SW+ +K +VH F A D++ ++
Sbjct: 642 TPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLE 701
Query: 707 EIIL 710
EI +
Sbjct: 702 EIAI 705
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 141/514 (27%), Positives = 241/514 (46%), Gaps = 52/514 (10%)
Query: 45 SNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNA 104
SN + ++ G+ +EA +F M + +S + M+ GY K G++ A+ +FD M ERN
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV 239
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSG-TKPDYVTFVTLLSGCNDPKMIKGLFQVHS 163
+T+T +I GY K+ F + F LF+RM + G K + T + C D + Q+H
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG 299
Query: 164 HVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKE 223
V ++ + + + NSL+ Y K+ + A ++ M +DSV++N+LI G E
Sbjct: 300 LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 224 AIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLD 283
A +LF +M G D +++ I G++ K +
Sbjct: 360 AYELFEKMP-------------------GKDMVSWTDMIKGFSGKGEI------------ 388
Query: 284 FYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFP 343
C+ +LF MPE D +++ MI+A+ G +E++ F K+ + ++
Sbjct: 389 ----SKCV----ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
F+++LS A++ DL G Q+H + + +++ V N+LV MY KC +A +IF +S
Sbjct: 441 FSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS 500
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
V + MIS NG +++LKLFS + + TF ++L A ++ + LG +
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 464 L-----HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
SY I G YA +VD+ + G L DA + MP + + W +L+S
Sbjct: 561 YFKSMKSSYNIEPG--PDHYA--CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLS- 615
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
AS L L+ +PDS + V +
Sbjct: 616 -ASKTHLRVDLAELAAKKLIELEPDSATPYVVLS 648
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 195/448 (43%), Gaps = 83/448 (18%)
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
+A+ CNS I + + + A ++++M R V++ A+I+ YA G +A ++F EM
Sbjct: 48 TAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM 107
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDC- 290
V+ T +N A++ K+ C
Sbjct: 108 ----------------------------------PVRVTTSYN-----AMITAMIKNKCD 128
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
L +A +LF +PE + VSY MIT + G E+ L+ + P S+
Sbjct: 129 LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAET----------PVKFRDSV 178
Query: 351 AANML---DLQMGRQLHS-QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
A+N+L L+ G+ + + A EV+ +++V Y K R +A +F +++ R
Sbjct: 179 ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERN 238
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRD-NVTADQATFASVLKASANLASISLGKQLH 465
+ WTAMI + G FE+ LF MR++ +V + T A + KA + G Q+H
Sbjct: 239 VITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIH 298
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
+ R ++ G++L+ MY+K G + +A +F M ++ VSWN+LI+
Sbjct: 299 GLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQIS 358
Query: 526 ATLKLFEEMV-------------------------LLGYQP--DSVSFLCVFTACSHWGL 558
+LFE+M L G P D++++ + +A G
Sbjct: 359 EAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGY 418
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIV 586
EE L +F+ M + ++ P ++S++
Sbjct: 419 YEEALCWFHKMLQ-KEVCPNSYTFSSVL 445
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 145/383 (37%), Gaps = 93/383 (24%)
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
TT + + N+ + +A+ +EAE IF ++S+R V W AMISA +NG ++ +
Sbjct: 43 TTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQ 102
Query: 429 LFSEMRRDNVTADQATFASVLKASANLAS------------------------------- 457
+F EM T+ A +++K +L
Sbjct: 103 VFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDE 162
Query: 458 ---------ISLGKQLHSYIIRSGFMSS--------IYAG---------SALVDMYAKCG 491
+ + S ++ SG++ + ++ G S++V Y K G
Sbjct: 163 AEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVF 550
+ DA +F M ERNV++W A+I Y G E LF M G + +S + +F
Sbjct: 223 RIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMF 282
Query: 551 TACSHWGLVEEG----------------------------LRYFNSMTKVYKLVPKRE-- 580
AC + EG L Y V+ ++ ++
Sbjct: 283 KACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSV 342
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
+ S++ L + + +A +L +MP D + W+ ++ +++K +LF M
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKMP-GKDMVSWTDMIKG--FSGKGEISK--CVELFGM 397
Query: 641 EVLRDAAPYVTMSNILAEAGQWE 663
+D + M + G +E
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYE 420
>AT1G56570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21195804-21197721 FORWARD
Length = 611
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 318/565 (56%), Gaps = 5/565 (0%)
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDL 234
I+ +LI SY + V+ A L+ EMP RD V + A+I GYA+ +N A + F EM
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 235 GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEA 294
G ++FT +VL + + +A+G +HG VK + +++V NA+++ Y+ +EA
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 295 RKLFYKMPEL-DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
L ++ ++ + V++ +IT + G + +++++ + + + +A+
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
+ + G+Q+H+ I S + V N+++D+Y +C EA+ F ++ + + W +
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
IS ++ E+L +F + TF S++ A AN+A+++ G+QLH I R GF
Sbjct: 286 IS-ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFE 532
++ +AL+DMYAKCG++ D+ ++F E+ +R N+VSW +++ Y S+G G ++LF+
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRS 592
+MV G +PD + F+ V +AC H GLVE+GL+YFN M Y + P R+ Y +VD+L R+
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 593 GKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR-AAEQLFNMEVLRDAAPYVT 651
GK +A +L+ MPF PDE W +IL +C+ HK+ L R AA ++ ++ + YV
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKP-KMVGTYVM 523
Query: 652 MSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILK 711
+S I A G+W +V+K MR G K SW+ ++++V F +DK P +
Sbjct: 524 LSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSV 583
Query: 712 IDILSEQMEKEGYVPDTSCALHNED 736
+ +L E+ + GYVP+ +++++
Sbjct: 584 LGLLIEETREAGYVPELDSLVNDQE 608
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 244/457 (53%), Gaps = 13/457 (2%)
Query: 69 PYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFV 128
P ++ I + +I Y ++G + A+ +FD M +R+ V +T +I GY+ S+ A++ F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 129 RMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY--CK 186
M + GT P+ T ++L C + K++ VH VVKLG + ++ + N++++ Y C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 187 MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
+ ++ A +++++ ++ VT+ LI G+ + G +K++ +M E + +
Sbjct: 161 V-TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
+ A +D + G+QIH +K N+ V N++LD Y + L EA+ F++M + D
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
+++N +I+ + E++ +F++ + + + F ++++ AN+ L G+QLH +
Sbjct: 280 ITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKL-SSRCTVPWTAMISANVQNGHFEE 425
+ V +ANAL+DMYAKC +++R+F ++ R V WT+M+ +G+ E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 426 SLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM----SSIYAGS 481
+++LF +M + D+ F +VL A + + G + + ++ S + IY +
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFN-VMESEYGINPDRDIY--N 455
Query: 482 ALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
+VD+ + G + +A ++ + MP + + +W A++ A
Sbjct: 456 CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGA 492
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 35/223 (15%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDL-VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEG 87
I A ++K GF + N I+DL + G LSEA+ F +M
Sbjct: 235 IHASVIKRGFQSNLPVMN-SILDLYCRCGYLSEAKHYFHEME------------------ 275
Query: 88 KLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
+++ +T+ LI +SD EA +F R G P+ TF +L++
Sbjct: 276 -------------DKDLITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVA 321
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM-PQRDSV 206
C + + Q+H + + G + V + N+LID Y K + + +++ E+ +R+ V
Sbjct: 322 ACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLV 381
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
++ +++ GY + G+ EA++LF +M G F AVL A
Sbjct: 382 SWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSA 424
>AT3G22150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7813028-7815490 FORWARD
Length = 820
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/642 (30%), Positives = 347/642 (54%), Gaps = 8/642 (1%)
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
+ +++FD+M +N V + LI Y K+ + EA + F M R KP V+FV + +
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 151 DPKMIKGLFQVHSHVVKLGHDSA--VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
+ IK + ++KLG + + + +S I Y ++ ++ + +++ +R+ +
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 209 NALIAGYANEGFNKEAIKLFME-MRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
N +I Y E+I+LF+E + + + T+ A L + G+Q HG+
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
K + + N+L+ YS+ + ++ +F M E D VS+N MI+A+ GL E +
Sbjct: 346 KNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
L ++Q + +LS A+N+ + ++G+Q H+ I E + + L+DMY+
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYS 464
Query: 388 KCRRPEEAERIF--VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATF 445
K ++++F + R W +MIS QNGH E++ +F +M N+ + T
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 446 ASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
AS+L A + + S+ LGKQLH + IR +++ SALVDMY+K G++K A +F + E
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRY 565
RN V++ +I Y +G GE + LF M G +PD+++F+ V +ACS+ GL++EGL+
Sbjct: 585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Query: 566 FNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD-EIMWSSILNSCRIH 624
F M +VY + P EHY I D+L R G+ ++A + + + + + +W S+L SC++H
Sbjct: 645 FEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLH 704
Query: 625 KNQDLAKRAAEQLFNMEVLRDAAPY-VTMSNILAEAGQWESVGKVKKAMRERGLTKVPAY 683
+LA+ +E+L + ++ + Y V +SN+ AE +W+SV KV++ MRE+GL K
Sbjct: 705 GELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGR 764
Query: 684 SWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYV 725
S +EI V+ F + D+ HP EI ID L++ M + ++
Sbjct: 765 SGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFL 806
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/618 (25%), Positives = 306/618 (49%), Gaps = 36/618 (5%)
Query: 80 ISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG--TKP 137
+S ++G +A+++FD++ + V + +I G+ ++ EA + RM ++ T
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV------- 190
D T+ + L C + K +K VH H+++ +S+ ++ NSL++ Y + C+
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY--VSCLNAPDCFE 163
Query: 191 -DLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
D+ +++ M +++ V +N LI+ Y G N EA + F M + + S +F V A
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 250 GIGLDDIAFGQQIHGYAVK--TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV 307
I +G +K + ++FV ++ + Y++ + +R++F E +
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTK---YDRRNFPFATMLSLAANMLDLQMGRQLH 364
+N MI Y + ESI LF + +K D + A S + + +++GRQ H
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAA--SAVSALQQVELGRQFH 341
Query: 365 SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFE 424
+ +++ N+L+ MY++C ++ +F+ + R V W MISA VQNG +
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 425 ESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG--SA 482
E L L EM++ D T ++L A++NL + +GKQ H+++IR G + G S
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSY 458
Query: 483 LVDMYAKCGSLKDAIQIFK--EMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
L+DMY+K G ++ + ++F+ ER+ +WN++IS Y NG E T +F +M+ +
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 541 PDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS-IVDVLCRSGKFDKAE 599
P++V+ + ACS G V+ G + + Y + + AS +VD+ ++G AE
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQY--LDQNVFVASALVDMYSKAGAIKYAE 576
Query: 600 KLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME---VLRDAAPYVTMSNIL 656
+ ++ + + + +++++ + + +RA +M+ + DA +V + +
Sbjct: 577 DMFSQTK-ERNSVTYTTMILG---YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSAC 632
Query: 657 AEAGQWESVGKVKKAMRE 674
+ +G + K+ + MRE
Sbjct: 633 SYSGLIDEGLKIFEEMRE 650
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 225/458 (49%), Gaps = 19/458 (4%)
Query: 80 ISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK--- 136
IS Y + G + ++ +FDS VERN + +IG Y ++D +E+ +LF+ G+K
Sbjct: 258 ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI--GSKEIV 315
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
D VT++ S + + ++ Q H V K + ++I NSL+ Y + V + +
Sbjct: 316 SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGV 375
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+ M +RD V++N +I+ + G + E + L EM+ GF+ T A+L A L +
Sbjct: 376 FLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNK 435
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLF--YKMPELDGVSYNMMIT 314
G+Q H + ++ + + + + L+D YSK + ++KLF E D ++N MI+
Sbjct: 436 EIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
Y G +++ +FRK+ A++L + + + +G+QLH +I D
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQ 554
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
V VA+ALVDMY+K + AE +F + R +V +T MI Q+G E ++ LF M+
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHS-----YIIRSGFMSSIYAGSALVDMYAK 489
+ D TF +VL A + I G ++ Y I+ S Y + DM +
Sbjct: 615 ESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPS--SEHYC--CITDMLGR 670
Query: 490 CGSLKDAIQIFKEMPERNVVS--WNALISAYASNGDGE 525
G + +A + K + E ++ W +L+ + +G+ E
Sbjct: 671 VGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELE 708
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 146/288 (50%), Gaps = 8/288 (2%)
Query: 65 FDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAF 124
F ++P + N ++ Y + G + + +F SM ER+ V++ +I + ++ E
Sbjct: 348 FRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNS-LIDS 183
L M + G K DY+T LLS ++ + + Q H+ +++ G + NS LID
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM--NSYLIDM 462
Query: 184 YCKMHCVDLASQLYK--EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
Y K + ++ +L++ +RD T+N++I+GY G ++ +F +M + +
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 242 TFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
T ++L A + + G+Q+HG++++ L NVFV +AL+D YSK + A +F +
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
E + V+Y MI Y G+ + +I+LF +Q + F +LS
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 62 RELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFI 121
R+ DQ N ++ ++ Y K G + A+++F ERN+VTYT +I GY +
Sbjct: 549 RQYLDQ----NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMI 155
A LF+ M SG KPD +TFV +LS C+ +I
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLI 638
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 330 bits (847), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 287/516 (55%), Gaps = 41/516 (7%)
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
D FPF +L N L L +G++ H+Q ++ D + V +L++MY+ C A+R
Sbjct: 61 DFHTFPF--LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQR 118
Query: 398 IFV-------------------------------KLSSRCTVPWTAMISANVQNGHFEES 426
+F ++ R + W+ +I+ V G ++E+
Sbjct: 119 VFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEA 178
Query: 427 LKLFSEMRRDN-----VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGS 481
L LF EM+ V ++ T ++VL A L ++ GK +H+YI + I G+
Sbjct: 179 LDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGT 238
Query: 482 ALVDMYAKCGSLKDAIQIFKEM-PERNVVSWNALISAYASNGDGEATLKLFEEMVLL-GY 539
AL+DMYAKCGSL+ A ++F + +++V +++A+I A G + +LF EM
Sbjct: 239 ALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNI 298
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
P+SV+F+ + AC H GL+ EG YF M + + + P +HY +VD+ RSG +AE
Sbjct: 299 NPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAE 358
Query: 600 KLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEA 659
IA MP +PD ++W S+L+ R+ + + A ++L ++ + A YV +SN+ A+
Sbjct: 359 SFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGA-YVLLSNVYAKT 417
Query: 660 GQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQM 719
G+W V ++ M +G+ KVP S+VE++ VH F D++ + + I +D + +++
Sbjct: 418 GRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRL 477
Query: 720 EKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCH 779
+ GYV DT L + +E K +L YHSE+LAIAF L+ T G+P+ ++KNLR C DCH
Sbjct: 478 REAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCH 537
Query: 780 AAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
+K+ISK+ REI VRD +RFHHF+DG CSCRD+W
Sbjct: 538 LVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 143/268 (53%), Gaps = 12/268 (4%)
Query: 279 NALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK-- 336
N++++ Y+K + +ARKLF +MPE + +S++ +I Y G KE+++LFR++Q K
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 337 --YDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
+ R N F +T+LS + L+ G+ +H+ + ++++ AL+DMYAKC E
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 394 EAERIFVKLSSRCTV-PWTAMISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKA 451
A+R+F L S+ V ++AMI G +E +LFSEM DN+ + TF +L A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 452 SANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVV 509
+ I+ GK +I G SI +VD+Y + G +K+A MP E +V+
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 510 SWNALISAYASNGD---GEATLKLFEEM 534
W +L+S GD E LK E+
Sbjct: 372 IWGSLLSGSRMLGDIKTCEGALKRLIEL 399
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 9/286 (3%)
Query: 56 GQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYS 115
G L A+ +FD ++ + N +++ Y K G + A+++FD M ERN ++++ LI GY
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 116 KSDQFIEAFKLFVRM-----CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGH 170
++ EA LF M + +P+ T T+LS C ++ VH+++ K
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 171 DSAVIICNSLIDSYCKMHCVDLASQLYKEM-PQRDSVTYNALIAGYANEGFNKEAIKLFM 229
+ +++ +LID Y K ++ A +++ + ++D Y+A+I A G E +LF
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 230 EMRDL-GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT-TLIWNVFVGNALLDFYSK 287
EM + TF +L A + I G+ ++ + ++ ++D Y +
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 288 HDCLVEARKLFYKMP-ELDGVSYNMMITAYAWTGLIKESINLFRKL 332
+ EA MP E D + + +++ G IK ++L
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 410 WTAMISA---NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
W +I A NV + + ++ MR V+ D TF +L + N + LG++ H+
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
I+ G + ++L++MY+ CG L+ A ++F + +++ +WN++++AYA G +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
KLF+EM + + +S+ C+ G +E L F M
Sbjct: 147 ARKLFDEMP----ERNVISWSCLINGYVMCGKYKEALDLFREM 185
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/688 (28%), Positives = 346/688 (50%), Gaps = 58/688 (8%)
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA-----VIICNSLIDSYCKMHCVD 191
PD F++L+ C D ++ VH+ +++ G S+ ++ C+SL+ S D
Sbjct: 27 PDESHFISLIHACKDTASLR---HVHAQILRRGVLSSRVAAQLVSCSSLLKS------PD 77
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
+ +++ +R+ NALI G + +++ F+ M LG + TF VL +
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGV 307
L G+ +H +K + + FV +L+D Y+K L A ++F + P+ +
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
+N++I Y + + LFR + +R + ++T
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMP----ERNSGSWST--------------------- 232
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESL 427
L+ Y A+++F + + V WT +I+ Q G +E ++
Sbjct: 233 --------------LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAI 278
Query: 428 KLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMY 487
+ EM + ++ T A+VL A + ++ G ++H YI+ +G G+ALVDMY
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 488 AKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
AKCG L A +F M ++++SW A+I +A +G ++ F +M+ G +PD V FL
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 548 CVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPF 607
V TAC + V+ GL +F+SM Y + P +HY +VD+L R+GK ++A +L+ MP
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
Query: 608 DPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGK 667
+PD W+++ +C+ HK A+ ++ L ++ Y+ + A G + V K
Sbjct: 459 NPDLTTWAALYRACKAHKGYRRAESVSQNLLELDP-ELCGSYIFLDKTHASKGNIQDVEK 517
Query: 668 VKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPD 727
+ ++++R + +S++E+ +++ F A D +H +EI LK+D + ++GY P
Sbjct: 518 RRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPG 577
Query: 728 TSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISK 787
++H+ +E+ K HSE+LA+ + T G+ I ++KNLR C DCH+ +K +SK
Sbjct: 578 ADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSK 637
Query: 788 IVGREITVRDSSRFHHFKDGICSCRDYW 815
I R+I +RD+ +FHHFKDG CSC DYW
Sbjct: 638 ISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 9/247 (3%)
Query: 61 ARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQF 120
A LF MP RN+ S + +I GY+ G+L+ AK++F+ M E+N V++T LI G+S++ +
Sbjct: 215 ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDY 274
Query: 121 IEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSL 180
A + M G KP+ T +LS C+ + ++H +++ G I +L
Sbjct: 275 ETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 181 IDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
+D Y K +D A+ ++ M +D +++ A+I G+A G +AI+ F +M G + +
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 241 FTFQAVLYAGIGLDDIAFGQQIH-----GYAVKTTLIWNVFVGNALLDFYSKHDCLVEAR 295
F AVL A + ++ G YA++ TL V V +D + L EA
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV----VDLLGRAGKLNEAH 450
Query: 296 KLFYKMP 302
+L MP
Sbjct: 451 ELVENMP 457
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 167/413 (40%), Gaps = 82/413 (19%)
Query: 62 RELFDQMPYRNTISSNVM-----ISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSK 116
R + Q+ R +SS V S LK S++ IF + ERN LI G ++
Sbjct: 46 RHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLS--IFRNSEERNPFVLNALIRGLTE 103
Query: 117 SDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-----------------------CND-- 151
+ +F + + F+ M R G KPD +TF +L C+
Sbjct: 104 NARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFV 163
Query: 152 ----------PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
+K FQV +++I N LI+ YC+ + +A+ L++ MP
Sbjct: 164 RLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP 223
Query: 202 QRDSVTYNALIAGYANEG-FNK------------------------------EAIKLFME 230
+R+S +++ LI GY + G N+ AI + E
Sbjct: 224 ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFE 283
Query: 231 MRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDC 290
M + G + +++T AVL A + G +IHGY + + + +G AL+D Y+K
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
L A +F M D +S+ MI +A G ++I FR++ ++ F +L+
Sbjct: 344 LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTA 403
Query: 351 AANMLDLQMGRQLHSQ-----AIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
N ++ +G AI T VLV VD+ + + EA +
Sbjct: 404 CLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV----VDLLGRAGKLNEAHEL 452
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 260/437 (59%), Gaps = 5/437 (1%)
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR-DNV 438
N +++ K A+++ S + + W MI V+N +EE+LK M ++
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
++ +FAS L A A L + K +HS +I SG + SALVD+YAKCG + + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
+F + +V WNA+I+ +A++G +++F EM PDS++FL + T CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
+EEG YF M++ + + PK EHY ++VD+L R+G+ +A +LI MP +PD ++W S+L
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
+S R +KN +L + A + L + + YV +SNI + +WES KV++ M + G+
Sbjct: 342 SSSRTYKNPELGEIAIQNLSKAK----SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 679 KVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNEDED 738
K SW+E +H F A D +H + K I ++ L ++ + +G+V DT L + E+
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEE 457
Query: 739 IKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDS 798
K E+L YHSE+LA+A+ ++ + G+ I + KN+R C+DCH IK +SK++ R I +RD
Sbjct: 458 EKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDR 517
Query: 799 SRFHHFKDGICSCRDYW 815
RFH F+DG+CSCRDYW
Sbjct: 518 IRFHRFEDGLCSCRDYW 534
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRK-LQFTKYDRRNFPFATMLSLAA 352
A+K+ + + +++N+MI Y +E++ + L FT F FA+ L+ A
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ DL + +HS I + + ++++ALVD+YAKC + +F + W A
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS- 471
MI+ +G E++++FSEM ++V+ D TF +L ++ + GK+ + R
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
+ A+VD+ + G +K+A ++ + MP E +VV W +L+S+
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR-SGT 135
N++I +K G+ +AK++ + ++N +T+ L+IGGY ++ Q+ EA K M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
KP+ +F + L+ C + VHS ++ G + I+ ++L+D Y K + + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ + + D +NA+I G+A G EAI++F EM TF +L
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 256 IAFGQQIHGYAVKTTLIWNVFVG-NALLDFYSKHDCLVEARKLFYKMP-ELDGVSYNMMI 313
+ G++ G + I A++D + + EA +L MP E D V + ++
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 314 TA 315
++
Sbjct: 342 SS 343
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 135/318 (42%), Gaps = 40/318 (12%)
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDS------------------------- 172
D+ +L C P K + Q H+ + KLG+ +
Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLL 88
Query: 173 --------AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEA 224
V N +I+S K+ LA ++ + ++ +T+N +I GY +EA
Sbjct: 89 LWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEA 148
Query: 225 IKLFMEMRDL-GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLD 283
+K M + + F+F + L A L D+ + +H + + + N + +AL+D
Sbjct: 149 LKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVD 208
Query: 284 FYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFP 343
Y+K + +R++FY + D +N MIT +A GL E+I +F +++ +
Sbjct: 209 VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSIT 268
Query: 344 FATMLSLAANMLDLQMGRQ---LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
F +L+ ++ L+ G++ L S+ E A+VD+ + R +EA +
Sbjct: 269 FLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY--GAMVDLLGRAGRVKEAYELIE 326
Query: 401 KLSSRC-TVPWTAMISAN 417
+ V W +++S++
Sbjct: 327 SMPIEPDVVIWRSLLSSS 344
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 328 bits (841), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/612 (29%), Positives = 330/612 (53%), Gaps = 8/612 (1%)
Query: 83 YLKEGKLSIAKEIFDSMVER--NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYV 140
Y ++ +A+ +FD + N + + L+I Y+ +D +A L+ +M SG +P
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM 200
T+ +L C + I +HSHV + + +C +L+D Y K +++A +++ EM
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG-LDDIAFG 259
P+RD V +NA+I+G++ + I LF++MR + + + + ++ +G + G
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
+ +HGY + ++ V +LD Y+K C++ AR++F + + V+++ MI Y
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSL--AANMLDLQMGRQLHSQAIVTTADSEVL 377
+IKE+ +F ++ P A L L A DL GR +H A+ ++
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT 344
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
V N ++ YAK +A R F ++ + + + ++I+ V N EES +LF EMR
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
+ D T VL A ++LA++ G H Y + G+ + +AL+DMY KCG L A
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAK 464
Query: 498 QIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWG 557
++F M +R++VSWN ++ + +G G+ L LF M G PD V+ L + +ACSH G
Sbjct: 465 RVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSG 524
Query: 558 LVEEGLRYFNSMTKV-YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
LV+EG + FNSM++ + ++P+ +HY + D+L R+G D+A + +MPF+PD + +
Sbjct: 525 LVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGT 584
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+L++C +KN +L ++++ ++ ++ V +SN + A +WE +++ ++RG
Sbjct: 585 LLSACWTYKNAELGNEVSKKMQSLGETTES--LVLLSNTYSAAERWEDAARIRMIQKKRG 642
Query: 677 LTKVPAYSWVEI 688
L K P YSWV++
Sbjct: 643 LLKTPGYSWVDV 654
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 5/183 (2%)
Query: 445 FASVLKASANLASISLGKQLHSYII-RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
F S+L+ ++ LG+ +H +++ RS +SS L +YA C ++ A +F E+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 504 PER--NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEE 561
P N ++W+ +I AYASN E L L+ +M+ G +P ++ V AC+ +++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 562 GLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
G + +S ++VD + G+ + A K+ EMP D + W+++++
Sbjct: 122 G-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGF 179
Query: 622 RIH 624
+H
Sbjct: 180 SLH 182
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
NT N ++ Y K GKL +AK +FD+M +R+ V++ ++ G+ EA LF M
Sbjct: 443 NTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ 502
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMI---KGLFQVHSH-----VVKLGHDSAVIICNSLIDS 183
+G PD VT + +LS C+ ++ K LF S + ++ H N + D
Sbjct: 503 ETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHY------NCMTDL 556
Query: 184 YCKMHCVDLASQLYKEMP-QRDSVTYNALIAG---YANEGFNKEAIKLFMEMRDLGFETS 239
+ +D A +MP + D L++ Y N E K +M+ LG T
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK---KMQSLGETTE 613
Query: 240 DFTFQAVLYA 249
+ Y+
Sbjct: 614 SLVLLSNTYS 623
>AT4G20770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11130762-11132984 REVERSE
Length = 740
Score = 327 bits (839), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/627 (29%), Positives = 325/627 (51%), Gaps = 48/627 (7%)
Query: 71 RNTISSNVMISGYLKEGKL-SIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVR 129
+N N ++S Y K G + +F+S+ + N V+YT +IGG ++ ++ +EA ++F
Sbjct: 137 KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRL 196
Query: 130 MCRSGTKPDYVTFVTLLS------GCNDPKMIKG---LFQVHSHVVKLGHDSAVIICNSL 180
MC G + D V +LS GC+ I G Q+H ++LG + + NSL
Sbjct: 197 MCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSL 256
Query: 181 IDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
++ Y K ++ A ++ EMP+ + V++N +I G+ E + ++++ MRD GF+ ++
Sbjct: 257 LEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNE 316
Query: 241 FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYK 300
T +VL A D+ G R++F
Sbjct: 317 VTCISVLGACFRSGDVETG-----------------------------------RRIFSS 341
Query: 301 MPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG 360
+P+ ++N M++ Y+ +E+I+ FR++QF + +LS A + L+ G
Sbjct: 342 IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 401
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMISANVQ 419
+Q+H I T + + L+ +Y++C + E +E IF + + W +MIS
Sbjct: 402 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRH 461
Query: 420 NGHFEESLKLFSEMRRDNV-TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIY 478
N ++L LF M + V ++ +FA+VL + + L S+ G+Q H +++SG++S +
Sbjct: 462 NMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF 521
Query: 479 AGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG 538
+AL DMY KCG + A Q F + +N V WN +I Y NG G+ + L+ +M+ G
Sbjct: 522 VETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSG 581
Query: 539 YQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKA 598
+PD ++F+ V TACSH GLVE GL +SM +++ + P+ +HY IVD L R+G+ + A
Sbjct: 582 EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDA 641
Query: 599 EKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
EKL P+ ++W +L+SCR+H + LA+R AE+L ++ + +A YV +SN +
Sbjct: 642 EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDP-QSSAAYVLLSNTYSS 700
Query: 659 AGQWESVGKVKKAMRERGLTKVPAYSW 685
QW+ ++ M + + K P SW
Sbjct: 701 LRQWDDSAALQGLMNKNRVHKTPGQSW 727
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 164/680 (24%), Positives = 298/680 (43%), Gaps = 100/680 (14%)
Query: 48 QIMDL-VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVT 106
+++DL ++ G AR++FD+M R+ S N ++ K G L A E+FD M ER+ V+
Sbjct: 12 RLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVS 71
Query: 107 YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSH-- 164
+ +I + +A ++ RM G P T ++LS C+ K++ G+F + H
Sbjct: 72 WNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACS--KVLDGVFGMRCHGV 129
Query: 165 VVKLGHDSAVIICNSLIDSYCKM-HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKE 223
VK G D + + N+L+ Y K VD ++++ + Q + V+Y A+I G A E E
Sbjct: 130 AVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLE 189
Query: 224 AIKLFMEMRDLGFETSDFTFQAVLYAGI---GLDDIA------FGQQIHGYAVKTTLIWN 274
A+++F M + G + +L G D ++ G+QIH A++ +
Sbjct: 190 AVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGD 249
Query: 275 VFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQF 334
+ + N+LL+ Y+K+ + A +F +MPE++ VS+N+MI + +S+ +++
Sbjct: 250 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 309
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
+ + ++L D++ GR
Sbjct: 310 SGFQPNEVTCISVLGACFRSGDVETGR--------------------------------- 336
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASAN 454
RIF + W AM+S H+EE++ F +M+ N+ D+ T + +L + A
Sbjct: 337 --RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 394
Query: 455 LASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE-MPERNVVSWNA 513
L + GKQ+H +IR+ + + S L+ +Y++C ++ + IF + + E ++ WN+
Sbjct: 395 LRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNS 454
Query: 514 LISAYASNGDGEATLKLFEEM----VLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
+IS + N L LF M VL P+ SF V ++CS + G R F+ +
Sbjct: 455 MISGFRHNMLDTKALILFRRMHQTAVLC---PNETSFATVLSSCSRLCSLLHG-RQFHGL 510
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLI-----------AEMPFD---------- 608
V ++ D+ C+ G+ D A + EM
Sbjct: 511 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 570
Query: 609 -------------PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAP----YVT 651
PD I + S+L +C + L + E L +M+ + P Y+
Sbjct: 571 VGLYRKMISSGEKPDGITFVSVLTAC---SHSGLVETGLEILSSMQRIHGIEPELDHYIC 627
Query: 652 MSNILAEAGQWESVGKVKKA 671
+ + L AG+ E K+ +A
Sbjct: 628 IVDCLGRAGRLEDAEKLAEA 647
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 216/497 (43%), Gaps = 79/497 (15%)
Query: 168 LGHDSAVIICNSLIDSY-------------------------------CKMHCVDLASQL 196
+G S +CN L+D Y CK+ + A ++
Sbjct: 1 MGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEV 60
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+ MP+RD V++N +I+ +GF ++A+ ++ M GF S FT +VL A + D
Sbjct: 61 FDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDG 120
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE-ARKLFYKMPELDGVSYNMMITA 315
FG + HG AVKT L N+FVGNALL Y+K +V+ ++F + + + VSY +I
Sbjct: 121 VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGG 180
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA---------NMLDLQMGRQLHSQ 366
A + E++ +FR + + + +LS++A + ++G+Q+H
Sbjct: 181 LARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCL 240
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEES 426
A+ ++ + N+L+++YAK + AE IF ++ V W MI Q ++S
Sbjct: 241 ALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKS 300
Query: 427 LKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
++ + MR ++ T SVL A + G+
Sbjct: 301 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR------------------------ 336
Query: 487 YAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
+IF +P+ +V +WNA++S Y++ E + F +M +PD +
Sbjct: 337 -----------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 385
Query: 547 LCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS-IVDVLCRSGKFDKAEKLIAEM 605
+ ++C+ +E G + + + + K H S ++ V K + +E + +
Sbjct: 386 SVILSSCARLRFLEGGKQIHGVVIRTE--ISKNSHIVSGLIAVYSECEKMEISECIFDDC 443
Query: 606 PFDPDEIMWSSILNSCR 622
+ D W+S+++ R
Sbjct: 444 INELDIACWNSMISGFR 460
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 215/737 (29%), Positives = 368/737 (49%), Gaps = 75/737 (10%)
Query: 53 VQTGQLSEARELFDQMPY-RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLI 111
+ TG+ AR L + Y RN ++ Y K L IA+ +F + RN ++ +I
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 112 GGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD 171
G + A FV M + PD + C K + VH +VVK G +
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
V + +SL D Y K +D AS+++ E+P R++V +NAL+ GY G N+EAI+LF +M
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL 291
R G E + T L A + + G+Q H A+ + + +G +LL+FY K +
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
A +F +M E D V++N++I+ Y GL++++I + + ++ K AT++S A
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 352 ANMLDLQMGRQL------HS------------------QAIV-------TTADSEVLVAN 380
A +L++G+++ HS +IV +T + ++++ N
Sbjct: 386 ARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWN 445
Query: 381 ALVDMYAKCR-----------------------------------RPEEAERIFVKLSSR 405
L+ YA+ + +EA+ +F+++ S
Sbjct: 446 TLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS 505
Query: 406 CTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
+P WT M++ VQNG EE++ +M+ + + + L A A+LAS+ +G
Sbjct: 506 GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIG 565
Query: 462 KQLHSYIIRSGFMSSIYA-GSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYAS 520
+ +H YIIR+ SS+ + ++LVDMYAKCG + A ++F + NA+ISAYA
Sbjct: 566 RTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYAL 625
Query: 521 NGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
G+ + + L+ + +G +PD+++ V +AC+H G + + + F + + P E
Sbjct: 626 YGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLE 685
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
HY +VD+L +G+ +KA +LI EMPF PD M S++ SC + +L + +L
Sbjct: 686 HYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLES 745
Query: 641 EVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEI--KHKVHIFCAN 698
E ++ YVT+SN A G W+ V K+++ M+ +GL K P SW++I + VH+F AN
Sbjct: 746 EP-ENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVAN 804
Query: 699 DKNHPQMKEIILKIDIL 715
DK H ++ EI + + +L
Sbjct: 805 DKTHTRINEIQMMLALL 821
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 264/524 (50%), Gaps = 6/524 (1%)
Query: 103 NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVH 162
++ +Y + K+ + EA L M + + +L GC + + Q+H
Sbjct: 34 SSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIH 93
Query: 163 SHVVKLG--HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
+ ++K G + I L+ Y K +++A L+ ++ R+ ++ A+I G
Sbjct: 94 ARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153
Query: 221 NKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
+ A+ F+EM + +F V A L FG+ +HGY VK+ L VFV ++
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
L D Y K L +A K+F ++P+ + V++N ++ Y G +E+I LF ++ +
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 341 NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
+T LS +ANM ++ G+Q H+ AIV + + ++ +L++ Y K E AE +F
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
Query: 401 KLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISL 460
++ + V W +IS VQ G E+++ + MR + + D T A+++ A+A ++ L
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 461 GKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYAS 520
GK++ Y IR F S I S ++DMYAKCGS+ DA ++F E++++ WN L++AYA
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 521 NGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
+G L+LF M L G P+ +++ + + G V+E F M + ++P
Sbjct: 454 SGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLI 512
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSC 621
+ ++++ + ++G ++A + +M P+ + L++C
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 206/662 (31%), Positives = 331/662 (50%), Gaps = 13/662 (1%)
Query: 71 RNTISSN-----VMISGYLKEGKLSIAKEIFDSMVER-NAVTYTLLIGGYSKSDQFIEAF 124
RN++ ++ +I Y K G A +F + ++ N V + ++I G+ S +
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSL 257
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
L++ + K +F L C+ + Q+H VVK+G + +C SL+ Y
Sbjct: 258 DLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 185 CKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQ 244
K V A ++ + + +NA++A YA + A+ LF MR FT
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLS 377
Query: 245 AVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL 304
V+ L +G+ +H K + + +ALL YSK C +A +F M E
Sbjct: 378 NVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK 437
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN----MLDLQMG 360
D V++ +I+ G KE++ +F ++ D P + +++ N + L+ G
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMK--DDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQN 420
Q+H I T V V ++L+D+Y+KC PE A ++F +S+ V W +MIS +N
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG 480
E S+ LF+ M + D + SVL A ++ AS+ GK LH Y +R G S +
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
+AL+DMY KCG K A IFK+M +++++WN +I Y S+GD L LF+EM G
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES 675
Query: 541 PDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEK 600
PD V+FL + +AC+H G VEEG F M + Y + P EHYA++VD+L R+G ++A
Sbjct: 676 PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYS 735
Query: 601 LIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
I MP + D +W +L++ R H N +L +AE+L ME R + YV + N+ EAG
Sbjct: 736 FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPER-GSTYVQLINLYMEAG 794
Query: 661 QWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQME 720
K+ M+E+GL K P SW+E+ + ++F + + P EI ++ L M
Sbjct: 795 LKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMV 854
Query: 721 KE 722
E
Sbjct: 855 DE 856
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 168/680 (24%), Positives = 308/680 (45%), Gaps = 68/680 (10%)
Query: 57 QLSEARELFDQMPYRNTISSNVMISG--------------YLKEGKLSIAKEIFDSMVE- 101
L +A + Y TI +V++ G Y+K G L A ++FD +
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 102 ------RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS-GCNDPKM 154
R+ + +I GY K +F E F RM G +PD + ++S C +
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNF 184
Query: 155 IKGLF-QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT-YNALI 212
+ Q+H +++ D+ + +LID Y K A +++ E+ + +V +N +I
Sbjct: 185 RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 213 AGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLI 272
G+ G + ++ L+M ++ + +F L A ++ FG+QIH VK L
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 273 WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
+ +V +LL YSK + EA +F + + +N M+ AYA +++LF +
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 333 QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRP 392
+ +F + ++S + + G+ +H++ S + +AL+ +Y+KC
Sbjct: 365 RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCD 424
Query: 393 EEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN--VTADQATFASVLK 450
+A +F + + V W ++IS +NG F+E+LK+F +M+ D+ + D SV
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 451 ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS 510
A A L ++ G Q+H +I++G + +++ GS+L+D+Y+KCG + A+++F M N+V+
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 511 WNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMT 570
WN++IS Y+ N E ++ LF M+ G PDSVS V A S + +G
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 571 KVYKLVPKREHYA-SIVDVLCRSGKFDKAEKLIAEMP----------------------- 606
++ +P H +++D+ + G AE + +M
Sbjct: 605 RLG--IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITA 662
Query: 607 ---FD--------PDEIMWSSILNSCRIHKNQDLAKRAAE---QLFNMEVLRDAAPYVTM 652
FD PD++ + S++++C + K E Q + +E + Y M
Sbjct: 663 LSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE--PNMEHYANM 720
Query: 653 SNILAEAGQWESVGKVKKAM 672
++L AG E KAM
Sbjct: 721 VDLLGRAGLLEEAYSFIKAM 740
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 150/569 (26%), Positives = 269/569 (47%), Gaps = 28/569 (4%)
Query: 119 QFIEAFKLFVRMCRSGTKPDYV---TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVI 175
++++A L+ + G+ P + TF +LL C+ + +H VV LG
Sbjct: 39 EYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPF 96
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQ-------RDSVTYNALIAGYANEGFNKEAIKLF 228
I SL++ Y K +D A Q++ Q RD +N++I GY KE + F
Sbjct: 97 IATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCF 156
Query: 229 MEMRDLGFETSDFTFQAVLYAGIGLDDIAF----GQQIHGYAVKTTLIWNVFVGNALLDF 284
M G F+ V+ + + F G+QIHG+ ++ +L + F+ AL+D
Sbjct: 157 RRMLVFGVRPDAFSLSIVV--SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDM 214
Query: 285 YSKHDCLVEARKLFYKMPELDGVS-YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFP 343
Y K ++A ++F ++ + V +N+MI + +G+ + S++L+ + +
Sbjct: 215 YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
F L + + GRQ+H + ++ V +L+ MY+KC EAE +F +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
+ W AM++A +N + +L LF MR+ +V D T ++V+ + L + GK
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
+H+ + + S+ SAL+ +Y+KCG DA +FK M E+++V+W +LIS NG
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 524 GEATLKLFEEMV--LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH 581
+ LK+F +M +PDS V AC+ + GL+ SM K LV
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFV 513
Query: 582 YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
+S++D+ + G + A K+ M + + + W+S++ SC N + LFN+
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNN---LPELSIDLFNLM 568
Query: 642 VLRDAAP-YVTMSNILAEAGQWESVGKVK 669
+ + P V+++++L S+ K K
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASLLKGK 597
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVT---ADQATFASVLKASANLASISLGKQLHSYIIR 470
I A +Q G + ++L L+S + D + TF S+LKA + L ++S GK +H ++
Sbjct: 31 IRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE-------RNVVSWNALISAYASNGD 523
G+ + ++LV+MY KCG L A+Q+F + R+V WN++I Y
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148
Query: 524 GEATLKLFEEMVLLGYQPDSVSF 546
+ + F M++ G +PD+ S
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSL 171
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 113/273 (41%), Gaps = 48/273 (17%)
Query: 8 IPLKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFD- 66
+ ++ S ++N+ P + + ++ G P + ++ + T L + + L
Sbjct: 543 VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGY 602
Query: 67 ----QMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIE 122
+P +T N +I Y+K G A+ IF M ++ +T+ L+I GY I
Sbjct: 603 TLRLGIP-SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCIT 661
Query: 123 AFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIK-------------------------- 156
A LF M ++G PD VTF++L+S CN ++
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 157 ------GLFQVHSHVVK---LGHDSAVIICNSLIDSYCKMHCVDL----ASQLYKEMPQR 203
GL + +K + DS++ +C L+ + H V+L A +L + P+R
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLC--LLSASRTHHNVELGILSAEKLLRMEPER 779
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGF 236
S TY LI Y G EA KL M++ G
Sbjct: 780 GS-TYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
>AT3G49740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18447788-18450001 FORWARD
Length = 737
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 356/664 (53%), Gaps = 19/664 (2%)
Query: 34 VKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAK 93
+++G + SN + + G L+ ++ FD++ + S ++S K G + A
Sbjct: 84 IRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAF 143
Query: 94 EIFDSMVERNAVT-YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP 152
E+FD M ER+ V + +I G +S + +LF M + G + D F T+LS C+
Sbjct: 144 EVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYG 203
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE--MPQRDSVTYNA 210
+ G QVHS V+K G A + N+LI Y V A +++E + RD VT+N
Sbjct: 204 SLDFGK-QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 211 LIAGYANEGFNK-EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT 269
+I G A GF + E++ +F +M + +D TF +V+ + A G Q+HG A+KT
Sbjct: 263 VIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGS---CSCAAMGHQVHGLAIKT 317
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLF 329
V NA + YS + A K+F + E D V++N MI++Y L K +++++
Sbjct: 318 GYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 330 RKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKC 389
+++ F F ++L A LDL + + + I S++ ++NAL+ Y+K
Sbjct: 378 KRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKN 434
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV--TADQATFAS 447
+ E+A+ +F + + + W A+IS NG E L+ FS + V D T ++
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 448 VLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERN 507
+L + +S+ LG Q H+Y++R G G+AL++MY++CG++++++++F +M E++
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLVEEGLRYF 566
VVSWN+LISAY+ +G+GE + ++ M G PD+ +F V +ACSH GLVEEGL F
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 567 NSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL--IAEMPFDPDEIMWSSILNSCRIH 624
NSM + + ++ +H++ +VD+L R+G D+AE L I+E +W ++ ++C H
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Query: 625 KNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYS 684
+ L K A+ L E D + YV +SNI A AG W+ + ++A+ G K S
Sbjct: 675 GDLKLGKMVAKLLMEKEK-DDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Query: 685 WVEI 688
W+ +
Sbjct: 734 WMRL 737
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 153/630 (24%), Positives = 285/630 (45%), Gaps = 75/630 (11%)
Query: 98 SMVERNAVTYTLL---IGGYSKSDQFIEAFKLFVRMCRSGT-KPD-YVTFVTLLSGCNDP 152
S + N+ T L + G ++S + A KLF + R T +PD Y + + + +
Sbjct: 12 SAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLR 71
Query: 153 KMIKGLFQVHSHVVKLG-----HDSAVIIC--------------------------NSLI 181
I G QVH + ++ G H S ++ +L+
Sbjct: 72 DTIFG-GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLL 130
Query: 182 DSYCKMHCVDLASQLYKEMPQRDSVT-YNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
+ K+ ++ A +++ +MP+RD V +NA+I G G+++ +++LF EM LG
Sbjct: 131 SASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDK 190
Query: 241 FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYK 300
F F +L + + FG+Q+H +K V NAL+ Y +V+A +F +
Sbjct: 191 FGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEE 249
Query: 301 --MPELDGVSYNMMITAYAWTGLIK-ESINLFRKLQFTKYDRRNFPFATML---SLAANM 354
+ D V++N++I A G + ES+ +FRK+ + F +++ S AA
Sbjct: 250 TDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA-- 305
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
MG Q+H AI T + LV+NA + MY+ A ++F L + V W MI
Sbjct: 306 ----MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMI 361
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM 474
S+ Q + ++ ++ M V D+ TF S+L S +L + + + + II+ G
Sbjct: 362 SSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLS 418
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF--- 531
S I +AL+ Y+K G ++ A +F+ +N++SWNA+IS + NG L+ F
Sbjct: 419 SKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCL 478
Query: 532 --EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA----SI 585
E+ +L PD+ + + + C V S T Y L + ++
Sbjct: 479 LESEVRIL---PDAYTLSTLLSIC-----VSTSSLMLGSQTHAYVLRHGQFKETLIGNAL 530
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM-EVLR 644
+++ + G + ++ +M + D + W+S++++ H + A + + + +V+
Sbjct: 531 INMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIP 589
Query: 645 DAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
DAA + + + + AG E ++ +M E
Sbjct: 590 DAATFSAVLSACSHAGLVEEGLEIFNSMVE 619
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 43/294 (14%)
Query: 12 NLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR 71
SL A + +V + A I+K G SN I + GQ+ +A LF++ +
Sbjct: 391 TFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRK 450
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N IS N +ISG+ G E F ++E VR+
Sbjct: 451 NLISWNAIISGFYHNGFPFEGLERFSCLLESE------------------------VRIL 486
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
PD T TLLS C + Q H++V++ G +I N+LI+ Y + +
Sbjct: 487 -----PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQ 541
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVL--- 247
+ +++ +M ++D V++N+LI+ Y+ G + A+ + M+D G D TF AVL
Sbjct: 542 NSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Query: 248 -YAGI---GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
+AG+ GL+ + HG +I NV + L+D + L EA L
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHG------VIRNVDHFSCLVDLLGRAGHLDEAESL 649
>AT1G03540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:883782-885611 FORWARD
Length = 609
Score = 325 bits (833), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 315/576 (54%), Gaps = 10/576 (1%)
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP-KMIKGLFQVHSHVVKLGHDSAV 174
K Q EA ++ S + +LL CN I G+ Q H+HVVK G ++
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGI-QFHAHVVKSGLETDR 96
Query: 175 IICNSLIDSYCKMH-CVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
+ NSL+ Y K+ + +++ +D++++ ++++GY + +A+++F+EM
Sbjct: 97 NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
G + ++FT + + A L ++ G+ HG + WN F+ + L Y + V+
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK-YDRRNFPFATMLSLAA 352
AR++F +MPE D + + +++A++ L +E++ LF + K F T+L+
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
N+ L+ G+++H + I S V+V ++L+DMY KC EA ++F +S + +V W+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
++ QNG E+++++F EM D F +VLKA A LA++ LGK++H +R G
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFE 532
++ SAL+D+Y K G + A +++ +M RN+++WNA++SA A NG GE + F
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRS 592
+MV G +PD +SF+ + TAC H G+V+EG YF M K Y + P EHY+ ++D+L R+
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 593 GKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQD-LAKRAAEQLFNMEVLRDAAPYVT 651
G F++AE L+ D +W +L C + + +A+R A+++ +E + YV
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEP-KYHMSYVL 571
Query: 652 MSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVE 687
+SN+ G+ ++K M RG+ K SW++
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 229/453 (50%), Gaps = 10/453 (2%)
Query: 76 SNVMISGYLKEGK-LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG 134
N ++S Y K G + + +FD ++A+++T ++ GY + ++A ++FV M G
Sbjct: 99 GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY-CKMHCVDLA 193
+ T + + C++ ++ H V+ G + I ++L Y VD A
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD-A 217
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIG 252
+++ EMP+ D + + A+++ ++ +EA+ LF M R G TF VL A
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
L + G++IHG + + NV V ++LLD Y K + EAR++F M + + VS++ +
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
+ Y G +++I +FR+++ ++ + F T+L A + +++G+++H Q +
Sbjct: 338 LGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
V+V +AL+D+Y K + A R++ K+S R + W AM+SA QNG EE++ F++
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFND 453
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCG 491
M + + D +F ++L A + + G+ + +S G S ++D+ + G
Sbjct: 454 MVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAG 513
Query: 492 SLKDAIQIFKEMPERNVVS-WNALISAYASNGD 523
++A + + RN S W L+ A+N D
Sbjct: 514 LFEEAENLLERAECRNDASLWGVLLGPCAANAD 546
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 110/198 (55%), Gaps = 10/198 (5%)
Query: 57 QLSEARELFDQMPYRNTISSNVMISG-----YLKEGKLSIAKEIFDSMVERNAVTYTLLI 111
+L + +E+ ++ N I SNV++ Y K G + A+++F+ M ++N+V+++ L+
Sbjct: 280 RLKQGKEIHGKL-ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALL 338
Query: 112 GGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD 171
GGY ++ + +A ++F M + D F T+L C ++ ++H V+ G
Sbjct: 339 GGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
VI+ ++LID Y K C+D AS++Y +M R+ +T+NA+++ A G +EA+ F +M
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 232 RDLGFETSDFTFQAVLYA 249
G + +F A+L A
Sbjct: 455 VKKGIKPDYISFIAILTA 472
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%)
Query: 70 YRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVR 129
+ N I + +I Y K G + A ++ M RN +T+ ++ +++ + EA F
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFND 453
Query: 130 MCRSGTKPDYVTFVTLLSGCNDPKMI 155
M + G KPDY++F+ +L+ C M+
Sbjct: 454 MVKKGIKPDYISFIAILTACGHTGMV 479
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/593 (31%), Positives = 315/593 (53%), Gaps = 13/593 (2%)
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGH-DSAVIICNSLIDSYCKMHCVDLASQLYKE 199
T + L C K Q+H +V+ G D + SL++ Y K + A ++
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 200 MPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA--GIGLDDIA 257
+RD YNALI+G+ G +A++ + EMR G +TF ++L + L D+
Sbjct: 122 -SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV- 179
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELD-GVSYNMMITAY 316
+++HG A K + +VG+ L+ YSK + +A+K+F ++P+ D V +N ++ Y
Sbjct: 180 --KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
+ ++++ +F K++ ++LS D+ GR +H A+ T + S++
Sbjct: 238 SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
+V+NAL+DMY K + EEA IF + R W +++ + G + +L LF M
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS 357
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM----SSIYAGSALVDMYAKCGS 492
+ D T +VL LAS+ G+++H Y+I SG + S+ + ++L+DMY KCG
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
L+DA +F M ++ SWN +I+ Y GE L +F M G +PD ++F+ + A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEI 612
CSH G + EG + M VY ++P +HYA ++D+L R+ K ++A +L P + +
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 613 MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAM 672
+W SIL+SCR+H N+DLA A ++L +E YV MSN+ EAG++E V V+ AM
Sbjct: 538 VWRSILSSCRLHGNKDLALVAGKRLHELEP-EHCGGYVLMSNVYVEAGKYEEVLDVRDAM 596
Query: 673 RERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYV 725
R++ + K P SW+ +K+ VH F ++ HP+ K I + ++ M Y+
Sbjct: 597 RQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 226/463 (48%), Gaps = 21/463 (4%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
+++ Y K G + A +F ER+ Y LI G+ + ++A + + M +G PD
Sbjct: 102 LVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPD 160
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
TF +LL G +D + + +VH KLG DS + + L+ SY K V+ A +++
Sbjct: 161 KYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFD 219
Query: 199 EMPQR-DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
E+P R DSV +NAL+ GY+ ++A+ +F +MR+ G S T +VL A DI
Sbjct: 220 ELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDID 279
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA 317
G+ IHG AVKT ++ V NAL+D Y K L EA +F M E D ++N ++ +
Sbjct: 280 NGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHD 339
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT----AD 373
+ G ++ LF ++ + T+L + L+ GR++H IV+
Sbjct: 340 YCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKS 399
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
S + N+L+DMY KC +A +F + + + W MI+ E +L +FS M
Sbjct: 400 SNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCM 459
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA-------GSALVDM 486
R V D+ TF +L+A ++ ++ G+ + M ++Y + ++DM
Sbjct: 460 CRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQ------METVYNILPTSDHYACVIDM 513
Query: 487 YAKCGSLKDAIQIFKEMPE-RNVVSWNALISAYASNGDGEATL 528
+ L++A ++ P N V W +++S+ +G+ + L
Sbjct: 514 LGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 28/222 (12%)
Query: 409 PWTAMISA-NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
P +A+ S + +G EE+ K + NV AT + L+ A G+Q+H +
Sbjct: 33 PSSALASLYSTVSGQIEENPKRY---EHHNV----ATCIATLQRCAQRKDYVSGQQIHGF 85
Query: 468 IIRSGFM-SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
++R GF+ S AG++LV+MYAKCG ++ A+ +F ER+V +NALIS + NG
Sbjct: 86 MVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLD 144
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVE----EGLRY---FNSMTKV-YKLVPK 578
++ + EM G PD +F + L + GL + F+S V LV
Sbjct: 145 AMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTS 204
Query: 579 REHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
+ S+ D A+K+ E+P D ++W++++N
Sbjct: 205 YSKFMSVED----------AQKVFDELPDRDDSVLWNALVNG 236
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 15/244 (6%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ + SN +I Y K L A IF++M ER+ T+ ++ + LF RM
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG----HDSAVIICNSLIDSYCKM 187
SG +PD VT T+L C ++ ++H +++ G S I NSL+D Y K
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK- 414
Query: 188 HCVDL--ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQA 245
C DL A ++ M +DS ++N +I GY + + A+ +F M G + + TF
Sbjct: 415 -CGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVG 473
Query: 246 VLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN----ALLDFYSKHDCLVEARKLFYKM 301
+L A F + + + ++N+ + ++D + D L EA +L
Sbjct: 474 LLQA---CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISK 530
Query: 302 PELD 305
P D
Sbjct: 531 PICD 534
>AT4G04370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:2134060-2136249 REVERSE
Length = 729
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/649 (30%), Positives = 340/649 (52%), Gaps = 7/649 (1%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
S+ +++ Y K G L+ A+++F+ M ER+ V +T +IG YS++ EA L M G
Sbjct: 84 SSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGI 143
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
KP VT + +LSG + ++ L H V G D + + NS+++ YCK V A
Sbjct: 144 KPGPVTLLEMLSGVLEITQLQCL---HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
L+ +M QRD V++N +I+GYA+ G E +KL MR G TF A L + D
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G+ +H VKT ++ + AL+ Y K + ++ +P D V + +MI+
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
G ++++ +F ++ + D + A++++ A + +G +H + +
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
N+L+ MYAKC +++ IF +++ R V W A+IS QN ++L LF EM+
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 436 DNVT-ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
V D T S+L+A ++ ++ +GK +H +IRS +ALVDMY+KCG L+
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
A + F + ++VVSW LI+ Y +G G+ L+++ E + G +P+ V FL V ++CS
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMW 614
H G+V++GL+ F+SM + + + P EH A +VD+LCR+ + + A K E P +
Sbjct: 561 HNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVL 620
Query: 615 SSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
IL++CR + ++ E + ++ DA YV + + A +W+ V + MR
Sbjct: 621 GIILDACRANGKTEVEDIICEDMIELKP-GDAGHYVKLGHSFAAMKRWDDVSESWNQMRS 679
Query: 675 RGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEG 723
GL K+P +S +E+ K F N +H +LK +LS +M + G
Sbjct: 680 LGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSLLK--LLSREMMQFG 726
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 258/510 (50%), Gaps = 6/510 (1%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+ F M + PD TF +LL C + + +H V+ G S I +SL+
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 182 DSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
+ Y K + A ++++EM +RD V + A+I Y+ G EA L EMR G +
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPV 148
Query: 242 TFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
T +L G+ +I Q +H +AV ++ V N++L+ Y K D + +A+ LF +M
Sbjct: 149 TLLEMLS---GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM 205
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR 361
+ D VS+N MI+ YA G + E + L +++ F LS++ M DL+MGR
Sbjct: 206 EQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGR 265
Query: 362 QLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNG 421
LH Q + T D ++ + AL+ MY KC + E + R+ + ++ V WT MIS ++ G
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 422 HFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGS 481
E++L +FSEM + ASV+ + A L S LG +H Y++R G+ A +
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN 385
Query: 482 ALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
+L+ MYAKCG L ++ IF+ M ER++VSWNA+IS YA N D L LFEEM Q
Sbjct: 386 SLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQ 445
Query: 542 -DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEK 600
DS + + + ACS G + G + + + + P ++VD+ + G + A++
Sbjct: 446 VDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 601 LIAEMPFDPDEIMWSSILNSCRIHKNQDLA 630
+ + D + W ++ H D+A
Sbjct: 505 CFDSISW-KDVVSWGILIAGYGFHGKGDIA 533
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 211/424 (49%), Gaps = 7/424 (1%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+N+ I ++ G +K+ + F M FTF ++L A L ++FG IH +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
+ ++ ++L++ Y+K L ARK+F +M E D V + MI Y+ G++ E+ +
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
L +++F + P T+L + + +L++ + LH A++ D ++ V N+++++Y
Sbjct: 134 LVNEMRFQGI--KPGP-VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 388 KCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFAS 447
KC +A+ +F ++ R V W MIS G+ E LKL MR D + DQ TF +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 448 VLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERN 507
L S + + +G+ LH I+++GF ++ +AL+ MY KCG + + ++ + +P ++
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFN 567
VV W +IS G E L +F EM+ G S + V +C+ G + G
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 568 SMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ 627
+ + + S++ + + G DK+ + M + D + W++I++ +N
Sbjct: 371 YVLR-HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG--YAQNV 426
Query: 628 DLAK 631
DL K
Sbjct: 427 DLCK 430
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 172/390 (44%), Gaps = 37/390 (9%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ +IVKTGFD I ++ G+ + + + +P ++ + VMISG ++ G+
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
A +F M++ S SD EA V C D
Sbjct: 327 AEKALIVFSEMLQ-------------SGSDLSSEAIASVVASCAQLGSFDLGA------- 366
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
VH +V++ G+ NSLI Y K +D + +++ M +RD V++
Sbjct: 367 -----------SVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIAFGQQIHGYAV 267
NA+I+GYA +A+ LF EM+ + D FT ++L A + G+ IH +
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
++ + V AL+D YSK L A++ F + D VS+ ++I Y + G ++
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALE 535
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIV---TTADSEVLVANALVD 384
++ + + + + F +LS ++ +Q G ++ S + + E L +VD
Sbjct: 536 IYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLA--CVVD 593
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
+ + +R E+A + + + +R ++ +I
Sbjct: 594 LLCRAKRIEDAFKFYKENFTRPSIDVLGII 623
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 258/445 (57%), Gaps = 5/445 (1%)
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLF 430
+ + N+L YA +PE+A + K+ + P WTA+ S +NG+F +LK+F
Sbjct: 57 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 116
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
+M+ + V + AT +++LK L+ + GK++H + +R + Y +ALVDMY K
Sbjct: 117 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 176
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
G L+ AI+IF + +++ SWN ++ YA G GE + F M+ G +PD+++F V
Sbjct: 177 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 236
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
+ C + GLV+EG +YF+ M Y ++P EH + +VD+L RSG D+A I M PD
Sbjct: 237 SVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPD 296
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKK 670
+W + L+SC+IH++ +LA+ A ++L +E ++A Y+ M N+ + +WE V +++
Sbjct: 297 ATIWGAFLSSCKIHRDLELAEIAWKRLQVLEP-HNSANYMMMINLYSNLNRWEDVERIRN 355
Query: 671 AMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSC 730
MR + +SW++I VHIF A K HP +I ++ L +M+K GYVPDTSC
Sbjct: 356 LMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSC 415
Query: 731 ALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVG 790
+ + K + L H+E+LA+ + LI +PI V+KN C+D H K +S +
Sbjct: 416 IHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRN 475
Query: 791 REITVRDSSRFHHFKDGICSCRDYW 815
REI +++ +R HHF+DG CSC D W
Sbjct: 476 REIVLQEGARVHHFRDGKCSCNDSW 500
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 31/278 (11%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y+K G L A+ +FD M +N V + L+ G S + +A L +RM + G KPD +T+
Sbjct: 2 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 61
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
+L SG LG + D+ ++ ++
Sbjct: 62 NSLASG----------------YATLGKPEKAL---------------DVIGKMKEKGVA 90
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
+ V++ A+ +G + G + A+K+F++M++ G + T +L L + G+++
Sbjct: 91 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 150
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
HG+ ++ LI + +V AL+D Y K L A ++F+ + S+N M+ YA G
Sbjct: 151 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 210
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG 360
+E I F + + F ++LS+ N +Q G
Sbjct: 211 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG 248
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 37/338 (10%)
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
Y K + A ++ M ++ V +N+L++G + K+A L + M G + T+
Sbjct: 2 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW 61
Query: 244 QAVL--YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
++ YA +G + A + G + + NV A+ SK+ A K+F KM
Sbjct: 62 NSLASGYATLGKPEKAL--DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 119
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR 361
E +GV N +T+L + + L G+
Sbjct: 120 QE-EGVGPNAA------------------------------TMSTLLKILGCLSLLHSGK 148
Query: 362 QLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNG 421
++H + + VA ALVDMY K + A IF + ++ W M+ G
Sbjct: 149 EVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 208
Query: 422 HFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI-IRSGFMSSIYAG 480
EE + FS M + D TF SVL N + G + + R G + +I
Sbjct: 209 RGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 268
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISA 517
S +VD+ + G L +A + M + + W A +S+
Sbjct: 269 SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSS 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 39/234 (16%)
Query: 53 VQTGQLSEARELFDQMPYRNTISSNVMISG------------------------------ 82
++TG L AR +FD M +N ++ N ++SG
Sbjct: 3 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 62
Query: 83 -----YLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
Y GK A ++ M E+ N V++T + G SK+ F A K+F++M
Sbjct: 63 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 122
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLA 193
G P+ T TLL ++ +VH ++ + +L+D Y K + A
Sbjct: 123 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 182
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
+++ + + ++N ++ GYA G +E I F M + G E TF +VL
Sbjct: 183 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 236
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 299/561 (53%), Gaps = 6/561 (1%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDF--YSKHDCLVEARKLFYKMPELDGVS-YNMMITAY 316
++IH + + L + + N LL F S L A+ LF S +N +I +
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 317 AWTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
+ + SI + ++ + R + F F L + + ++H I + +
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
+VA +LV Y+ E A ++F ++ R V W MI G ++L ++ M
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
+ V D T ++L + A+++++++G LH S ++ +AL+DMYAKCGSL++
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 496 AIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
AI +F M +R+V++WN++I Y +G G + F +MV G +P++++FL + CSH
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWS 615
GLV+EG+ +F M+ + L P +HY +VD+ R+G+ + + ++I D ++W
Sbjct: 322 QGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWR 381
Query: 616 SILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
++L SC+IH+N +L + A ++L +E +A YV M++I + A ++ ++K +R
Sbjct: 382 TLLGSCKIHRNLELGEVAMKKLVQLEAF-NAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 676 GLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNE 735
L VP +SW+EI +VH F +DK HP+ I ++ + + GY P+ S
Sbjct: 441 DLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPT 500
Query: 736 DEDIKVESLKY-HSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREIT 794
D + S HSE+LAIA+ L+ T G+ + + KNLR C DCH+ K +SK REI
Sbjct: 501 LSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREII 560
Query: 795 VRDSSRFHHFKDGICSCRDYW 815
VRD RFHHF DGICSC DYW
Sbjct: 561 VRDRVRFHHFADGICSCNDYW 581
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 185/415 (44%), Gaps = 37/415 (8%)
Query: 87 GKLSIAKEIFDSM-VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG-TKPDYVTFVT 144
G LS A+ +FD + + + LI G+S S + + + RM S ++PD TF
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
L C K I ++H V++ G I+ SL+ Y V++AS+++ EMP RD
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
V++N +I +++ G + +A+ ++ M + G +T A+L + + + G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
A VFV NAL+D Y+K L A +F M + D +++N MI Y G E
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ----LHSQAIVTTADSEVLVAN 380
+I+ FRK+ + F +L ++ ++ G + + SQ +T V
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTP---NVKHYG 349
Query: 381 ALVDMYAKCRRPEEA-ERIFVKLSSRCTVPWTAMISA-----NVQNGHFEESLKLFSEMR 434
+VD+Y + + E + E I+ V W ++ + N++ G E ++K ++
Sbjct: 350 CMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELG--EVAMKKLVQLE 407
Query: 435 RDN------------VTADQATFASV--------LKASANLASISLGKQLHSYII 469
N D FAS+ L+ + I +G Q+H +++
Sbjct: 408 AFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVV 462
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ I + ++ Y G + IA ++FD M R+ V++ ++I +S +A ++ RM
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
G D T V LLS C + +H + +S V + N+LID Y K ++
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
A ++ M +RD +T+N++I GY G EAI F +M G + TF +L
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 129/317 (40%), Gaps = 57/317 (17%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
SN +I Y K G L A +F+ M +R+ +T+ +I GY +EA F +M SG
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 305
Query: 136 KPDYVTFVTLLSGCNDPKMIK-GL--FQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
+P+ +TF+ LL GC+ ++K G+ F++ S L + C ++D Y + ++
Sbjct: 306 RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGC--MVDLYGRAGQLEN 363
Query: 193 ASQL-YKEMPQRDSVTYNALIAG---YANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
+ ++ Y D V + L+ + N + A+K +++ F D+ +Y
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLE--AFNAGDYVLMTSIY 421
Query: 249 AGI----------------------GLDDIAFGQQIHGYAV------KTTLIWNVF---V 277
+ G I G Q+H + V ++ +I++ +
Sbjct: 422 SAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVI 481
Query: 278 GNALLDFYSKHD-----------CLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
A+L Y D CL A E ++Y +M T T I +++
Sbjct: 482 NRAILAGYKPEDSNRTAPTLSDRCLGSADT---SHSEKLAIAYGLMRTTAGTTLRITKNL 538
Query: 327 NLFRKLQ-FTKYDRRNF 342
+ R FTKY + F
Sbjct: 539 RVCRDCHSFTKYVSKAF 555
>AT1G23450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8324698-8326697 FORWARD
Length = 666
Score = 322 bits (824), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 199/636 (31%), Positives = 334/636 (52%), Gaps = 15/636 (2%)
Query: 64 LFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEA 123
++ P + N I +K G L A E FD M R+ VTY LLI G S+ + A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 124 FKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
+L+ M G + TF ++LS C+D + QVH V+ LG + + ++L+
Sbjct: 97 IELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGL 156
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
Y + VD+A +L+ EM R+ N L+ + G +K ++++ M G + T+
Sbjct: 157 YACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTY 216
Query: 244 QAVLYAGIGLDDIAF-GQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
+ G D + + G+Q+H VK+ I N+FV N L+D+YS L + + F +
Sbjct: 217 -CYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAV 275
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR 361
PE D +S+N +++ A G + +S++LF K+QF PF + L+ + D+Q G+
Sbjct: 276 PEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGK 335
Query: 362 QLHSQAIVTTAD-SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQN 420
Q+H + D S + V +AL+DMY KC E + ++ L +++++ +
Sbjct: 336 QIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHC 395
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI------IRSGFM 474
G ++ +++F M + D+ T ++VLKA S+SL + LHS I+SG+
Sbjct: 396 GITKDIIEMFGLMIDEGTGIDEVTLSTVLKA----LSLSLPESLHSCTLVHCCAIKSGYA 451
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEM 534
+ + +L+D Y K G + + ++F E+ N+ ++I+ YA NG G +K+ EM
Sbjct: 452 ADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREM 511
Query: 535 VLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGK 594
+ PD V+ L V + CSH GLVEEG F+S+ Y + P R+ YA +VD+L R+G
Sbjct: 512 DRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGL 571
Query: 595 FDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSN 654
+KAE+L+ + D D + WSS+L SCRIH+N+ + +RAAE L N+E + A Y+ +S
Sbjct: 572 VEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEP-ENFAVYIQVSK 630
Query: 655 ILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKH 690
E G +E ++++ R L + YS V +K+
Sbjct: 631 FYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 226/475 (47%), Gaps = 61/475 (12%)
Query: 61 ARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQF 120
A +LFD+M RN N+++ + + G+ +K +F+
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGE---SKRLFE----------------------- 199
Query: 121 IEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD-SAVIICNS 179
+++RM G + +T+ ++ GC+ +++ Q+HS VVK G + S + + N
Sbjct: 200 -----VYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANV 254
Query: 180 LIDSYCKMHCVDLASQL--YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
L+D Y C DL+ + + +P++D +++N++++ A+ G +++ LF +M+ G
Sbjct: 255 LVDYYSA--CGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEARK 296
S F + L DI G+QIH Y +K + ++ V +AL+D Y K + + +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL 372
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL--QFTKYDRRNFPFATMLSLAANM 354
L+ +P L+ N ++T+ G+ K+ I +F + + T D LS
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE------VTLSTVLKA 426
Query: 355 LDLQMGRQLHSQAIV------TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV 408
L L + LHS +V + ++V V+ +L+D Y K + E + ++F +L +
Sbjct: 427 LSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIF 486
Query: 409 PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL---- 464
T++I+ +NG + +K+ EM R N+ D+ T SVL ++ + G+ +
Sbjct: 487 CLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSL 546
Query: 465 -HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ-IFKEMPERNVVSWNALISA 517
Y I G +YA +VD+ + G ++ A + + + + + V+W++L+ +
Sbjct: 547 ESKYGISPG--RKLYA--CMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQS 597
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 201/671 (29%), Positives = 353/671 (52%), Gaps = 25/671 (3%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I A ++K G + +N I V LS+A ++FD+M RN ++ M+SGY +GK
Sbjct: 27 IQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGK 86
Query: 89 LSIAKEIFDSMVER-----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
+ A E++ M++ N Y+ ++ ++ R+ + + D V
Sbjct: 87 PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGD----V 142
Query: 144 TLLSGCNDPKMIKG-LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
L++ D + G L + +S ++ S+ N+LI YCK +D A L+ MPQ
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS-WNTLISGYCKAGLMDEAVTLFHRMPQ 201
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
+ V++N LI+G+ ++G + A++ + M+ G F L A + G+Q+
Sbjct: 202 PNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY--KMPELDGVS-YNMMITAYAWT 319
H VK+ L + F +AL+D YS L+ A +F+ K+ V+ +N M++ +
Sbjct: 261 HCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF--- 317
Query: 320 GLIKES--INLFRKLQFTKYDR--RNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
LI E L+ LQ + D ++ + L + N ++L++G Q+HS +V+ + +
Sbjct: 318 -LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
+V + LVD++A ++A ++F +L ++ + ++ +I V++G + LF E+ +
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
+ ADQ +++LK ++LAS+ GKQ+H I+ G+ S +ALVDMY KCG + +
Sbjct: 437 LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDN 496
Query: 496 AIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
+ +F M ER+VVSW +I + NG E + F +M+ +G +P+ V+FL + +AC H
Sbjct: 497 GVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH 556
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWS 615
GL+EE +M Y L P EHY +VD+L ++G F +A +LI +MP +PD+ +W+
Sbjct: 557 SGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWT 616
Query: 616 SILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
S+L +C HKN L AE+L D + Y ++SN A G W+ + KV++A ++
Sbjct: 617 SLLTACGTHKNAGLVTVIAEKLLK-GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKL 675
Query: 676 GLTKVPAYSWV 686
G K SW+
Sbjct: 676 G-AKESGMSWI 685
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/572 (25%), Positives = 260/572 (45%), Gaps = 47/572 (8%)
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
L C + K + +HV+K G V I N++I Y + A +++ EM +R+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS-DFTFQAVLYAGIGLDDIAFGQQIHG 264
VT+ +++GY ++G +AI+L+ M D E + +F + AVL A + DI G ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
K L +V + N+++D Y K+ L+EA F ++ S+N +I+ Y GL+ E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 325 SINLFRKLQ--------------FTKYDRRNFPFATMLSLAANMLD-------------- 356
++ LF ++ K R F + +LD
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 357 --LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF--VKLSSRCTVP-WT 411
L MG+QLH + + +S +AL+DMY+ C A +F KL+ +V W
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
+M+S + N E +L L ++ + ++ D T + LK N ++ LG Q+HS ++ S
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
G+ GS LVD++A G+++DA ++F +P +++++++ LI +G LF
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 532 EEMVLLGYQPDSVSFLCVFTACSH-----WGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
E++ LG D + CS WG GL + K Y+ P ++V
Sbjct: 432 RELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL----CIKKGYESEPVTA--TALV 485
Query: 587 DVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDA 646
D+ + G+ D L M + D + W+ I+ + + A R ++ N+ + +
Sbjct: 486 DMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNK 544
Query: 647 APYVTMSNILAEAGQWESVGKVKKAMR-ERGL 677
++ + + +G E + M+ E GL
Sbjct: 545 VTFLGLLSACRHSGLLEEARSTLETMKSEYGL 576
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 104/234 (44%), Gaps = 40/234 (17%)
Query: 441 DQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
D A+ L+ + + G+ + +++I+ G +++ + ++ MY L DA ++F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 501 KEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS---FLCVFTACSHWG 557
EM ERN+V+W ++S Y S+G ++L+ M L + ++ + + V AC G
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM--LDSEEEAANEFMYSAVLKACGLVG 121
Query: 558 LVEEGLRYF---------------NSMTKVYK---------------LVPKREHYASIVD 587
++ G+ + NS+ +Y L P + +++
Sbjct: 122 DIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 588 VLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
C++G D+A L MP P+ + W+ ++ S + K + RA E L M+
Sbjct: 182 GYCKAGLMDEAVTLFHRMP-QPNVVSWNCLI-SGFVDKG---SPRALEFLVRMQ 230
>AT2G21090.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9045695-9047488 REVERSE
Length = 597
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 282/484 (58%), Gaps = 35/484 (7%)
Query: 274 NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
N++ N ++ Y K LV AR +F MPE D VS+N M+ YA G + E++ +++ +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 334 FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
+ F FA +L+ LQ+ RQ H Q +V S V+++ +++D YAKC + E
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 394 EAERIFVKLSSR-------------------------CTVP------WTAMISANVQNGH 422
A+R F +++ + C +P WTA+I+ V+ G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
+L LF +M V +Q TF+S L ASA++AS+ GK++H Y+IR+ + S+
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 483 LVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
L+DMY+K GSL+ + ++F+ ++ + V WN +ISA A +G G L++ ++M+ QP
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
+ + + + ACSH GLVEEGLR+F SMT + +VP +EHYA ++D+L R+G F + +
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRK 471
Query: 602 IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
I EMPF+PD+ +W++IL CRIH N++L K+AA++L ++ +APY+ +S+I A+ G+
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDP-ESSAPYILLSSIYADHGK 530
Query: 662 WESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMK--EIILKIDILSEQM 719
WE V K++ M++R + K A SW+EI+ KV F +D +H + EI + L+ +
Sbjct: 531 WELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVI 590
Query: 720 EKEG 723
E+E
Sbjct: 591 EEEA 594
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 169/327 (51%), Gaps = 33/327 (10%)
Query: 36 TGFD-PSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKE 94
TGF P+T SN+ I ++ G+ +A ++FDQM RN S N M+SGY+K G L A+
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 95 IFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKM 154
+FDSM ER+ V++ ++ GY++ EA + RSG K + +F LL+ C +
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM-------HCVD---------------- 191
++ Q H V+ G S V++ S+ID+Y K C D
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 192 --------LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
A +L+ EMP+++ V++ ALIAGY +G A+ LF +M LG + FTF
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
+ L A + + G++IHGY ++T + N V ++L+D YSK L + ++F +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 304 L-DGVSYNMMITAYAWTGLIKESINLF 329
D V +N MI+A A GL +++ +
Sbjct: 375 KHDCVFWNTMISALAQHGLGHKALRML 401
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 222/501 (44%), Gaps = 70/501 (13%)
Query: 130 MCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA-VIICNSLIDSY---- 184
+ + G + + +LL C D K +K +H H+ G ++ N LI Y
Sbjct: 37 LTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCG 96
Query: 185 -----CK----MHCVDL------------------ASQLYKEMPQRDSVTYNALIAGYAN 217
CK MH +L A ++ MP+RD V++N ++ GYA
Sbjct: 97 KPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ 156
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
+G EA+ + E R G + ++F+F +L A + + +Q HG + + NV +
Sbjct: 157 DGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVL 216
Query: 278 GNALLDFYSK-------HDCLVE------------------------ARKLFYKMPELDG 306
+++D Y+K C E A KLF +MPE +
Sbjct: 217 SCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNP 276
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
VS+ +I Y G +++LFRK+ F F++ L +A++ L+ G+++H
Sbjct: 277 VSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGY 336
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR--CTVPWTAMISANVQNGHFE 424
I T +V ++L+DMY+K E +ER+F + C V W MISA Q+G
Sbjct: 337 MIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC-VFWNTMISALAQHGLGH 395
Query: 425 ESLKLFSEMRRDNVTADQATFASVLKASANLASISLG-KQLHSYIIRSGFMSSIYAGSAL 483
++L++ +M + V ++ T +L A ++ + G + S ++ G + + L
Sbjct: 396 KALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACL 455
Query: 484 VDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
+D+ + G K+ ++ +EMP E + WNA++ +G+ E K +E++ L +
Sbjct: 456 IDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESS 515
Query: 543 SVSFL--CVFTACSHWGLVEE 561
+ L ++ W LVE+
Sbjct: 516 APYILLSSIYADHGKWELVEK 536
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 162/385 (42%), Gaps = 67/385 (17%)
Query: 342 FPF---ATMLSLAANMLDLQMGRQLHSQAIVTT-ADSEVLVANALVDMYAKCRRPEEAER 397
PF A++L + L+ G+ +H +T L++N L+ MY KC +P +A +
Sbjct: 44 LPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACK 103
Query: 398 IFVKLSSRCTVPWTAMISANV-------------------------------QNGHFEES 426
+F ++ R W M+S V Q+G+ E+
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 427 LKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
L + E RR + ++ +FA +L A + L +Q H ++ +GF+S++ +++D
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 487 YAKCGSLKDAI-------------------------------QIFKEMPERNVVSWNALI 515
YAKCG ++ A ++F EMPE+N VSW ALI
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL 575
+ Y G G L LF +M+ LG +P+ +F A + + G M + +
Sbjct: 284 AGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NV 342
Query: 576 VPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
P +S++D+ +SG + +E++ D + W++++++ H A R +
Sbjct: 343 RPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLD 402
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAG 660
+ V + V + N + +G
Sbjct: 403 DMIKFRVQPNRTTLVVILNACSHSG 427
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLS 90
+++ GF + S I + GQ+ A+ FD+M ++ +ISGY K G +
Sbjct: 203 GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDME 262
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
A+++F M E+N V++T LI GY + A LF +M G KP+ TF + L
Sbjct: 263 AAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASA 322
Query: 151 DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR-DSVTYN 209
++ ++H ++++ I+ +SLID Y K ++ + ++++ + D V +N
Sbjct: 323 SIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWN 382
Query: 210 ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+I+ A G +A+++ +M + + T +L A
Sbjct: 383 TMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 300/562 (53%), Gaps = 10/562 (1%)
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
H +A+++ NSL+ Y K + A +L+ EMP RD ++ N + G+ N+E F+
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLR---NRETESGFV 142
Query: 230 EMRDL----GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY 285
++ + GF+ + T VL + + IH A+ + + VGN L+ Y
Sbjct: 143 LLKRMLGSGGFDHATLTI--VLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSY 200
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
K C V R +F M + ++ +I+ L ++ + LF ++ + +
Sbjct: 201 FKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYL 260
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
+ L+ + + G+Q+H+ +SE+ + +AL+DMY+KC E+A IF +
Sbjct: 261 SALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEV 320
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
V T ++ QNG EE+++ F M + V D ++VL S S+ LGKQLH
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLH 380
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
S +I+ F + + + L++MY+KCG L D+ +F+ MP+RN VSWN++I+A+A +G G
Sbjct: 381 SLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGL 440
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
A LKL+EEM L +P V+FL + ACSH GL+++G N M +V+ + P+ EHY I
Sbjct: 441 AALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCI 500
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD 645
+D+L R+G +A+ I +P PD +W ++L +C H + ++ + AAEQLF
Sbjct: 501 IDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSS 560
Query: 646 AAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQM 705
+A ++ ++NI + G+W+ K K M+ G+TK S +EI+HK H F DK HPQ
Sbjct: 561 SA-HILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQA 619
Query: 706 KEIILKIDILSEQMEKEGYVPD 727
+ I + L M EGY PD
Sbjct: 620 EAIYDVLSGLFPVMVDEGYRPD 641
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 248/539 (46%), Gaps = 34/539 (6%)
Query: 13 LSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRN 72
LS + +P++ C+ A I+K E E D +RN
Sbjct: 51 LSICGREGWFPHLGPCLHASIIKN----------------------PEFFEPVDADIHRN 88
Query: 73 TISS-NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ N ++S Y K GKL A ++FD M R+ ++ ++ G+ ++ + F L RM
Sbjct: 89 ALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRML 148
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
SG D+ T +LS C+ P+ +H+ + G+D + + N LI SY K C
Sbjct: 149 GSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
++ M R+ +T A+I+G +++ ++LF MR + T+ + L A
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
G I GQQIH K + + + +AL+D YSK + +A +F E+D VS +
Sbjct: 268 GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV 327
Query: 312 MITAYAWTGLIKESINLF-RKLQFTKYDRRNFPFATMLSLAANMLD--LQMGRQLHSQAI 368
++ A G +E+I F R LQ N A L + +D L +G+QLHS I
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV---LGVSFIDNSLGLGKQLHSLVI 384
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
V N L++MY+KC +++ +F ++ R V W +MI+A ++GH +LK
Sbjct: 385 KRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 429 LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR-SGFMSSIYAGSALVDMY 487
L+ EM V TF S+L A +++ I G++L + + G + ++DM
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 488 AKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
+ G LK+A +P + + W AL+ A + +GD E E+ L PDS S
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQ--LFQTAPDSSS 561
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 202/698 (28%), Positives = 361/698 (51%), Gaps = 54/698 (7%)
Query: 71 RNTISSNVMISGYLKEGKL-SIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVR 129
++T+ N ++S Y K G + A FD + +++ V++ +I G+S+++ +AF+ F
Sbjct: 155 KDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCL 214
Query: 130 MCRSGTKPDYVTFVTLLSGCNDPKMIKGLF-----QVHSHVVKLGH-DSAVIICNSLIDS 183
M + T+P+Y T +L C M K + Q+HS+VV+ + V +CNSL+
Sbjct: 215 MLKEPTEPNYATIANVLPVC--ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSF 272
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FT 242
Y ++ ++ A+ L+ M +D V++N +IAGYA+ +A +LF + G + D T
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVT 332
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTT-LIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
++L L D+A G++IH Y ++ + L+ + VGNAL+ FY++ A F M
Sbjct: 333 IISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLM 392
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ-MG 360
D +S+N ++ A+A + + L + T+LSL +++Q +G
Sbjct: 393 STKDIISWNAILDAFADS---PKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIG 449
Query: 361 R--QLHSQAI---VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT-VPWTAMI 414
+ ++H ++ + + E + NAL+D YAKC E A +IF+ LS R T V + +++
Sbjct: 450 KVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLL 509
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTA-------------------------------DQA 443
S V +G +++ LF+EM ++T +
Sbjct: 510 SGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTV 569
Query: 444 TFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
T ++L A LAS+ L +Q H YIIR G + I L+D+YAKCGSLK A +F+
Sbjct: 570 TIMNLLPVCAQLASLHLVRQCHGYIIRGG-LGDIRLKGTLLDVYAKCGSLKHAYSVFQSD 628
Query: 504 PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGL 563
R++V + A+++ YA +G G+ L ++ M +PD V + TAC H GL+++GL
Sbjct: 629 ARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGL 688
Query: 564 RYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRI 623
+ ++S+ V+ + P E YA VD++ R G+ D A + +MP +P+ +W ++L +C
Sbjct: 689 QIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTT 748
Query: 624 HKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAY 683
+ DL A L E D +V +SN+ A +WE V +++ M+++ + K
Sbjct: 749 YNRMDLGHSVANHLLQAES-DDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGC 807
Query: 684 SWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEK 721
SW+E+ + ++F + D +HP+ I ++ L QM++
Sbjct: 808 SWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 202/409 (49%), Gaps = 14/409 (3%)
Query: 119 QFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICN 178
QF++ F+L SG D+ F+ ++ C + +H V KLGH + +
Sbjct: 6 QFVQNFRLL-----SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSK 60
Query: 179 SLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG-FE 237
S+++ Y K +D +++++M D V +N ++ G + +E ++ F M +
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPK 119
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV-EARK 296
S TF VL + L D G+ +H Y +K L + VGNAL+ Y+K + +A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANM-- 354
F + + D VS+N +I ++ ++ ++ F + + A +L + A+M
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 355 -LDLQMGRQLHSQAIVTT-ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ + GRQ+HS + + + V V N+LV Y + R EEA +F ++ S+ V W
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 413 MISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
+I+ N + ++ +LF + + +V+ D T S+L A L ++ GK++HSYI+R
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Query: 472 GF-MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYA 519
+ + G+AL+ YA+ G A F M ++++SWNA++ A+A
Sbjct: 360 SYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 232/477 (48%), Gaps = 25/477 (5%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG- 134
S +++ Y K ++ +++F M + V + +++ G S S E + F M +
Sbjct: 59 SKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR-ETMRFFKAMHFADE 117
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV-DLA 193
KP VTF +L C +HS+++K G + ++ N+L+ Y K + A
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
+ + +D V++NA+IAG++ +A + F M E + T VL +
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 254 D-DIAF--GQQIHGYAVKTT-LIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSY 309
D +IA G+QIH Y V+ + L +VFV N+L+ FY + + EA LF +M D VS+
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 310 NMMITAYAWTGLIKESINLFRKL-QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
N++I YA ++ LF L + ++L + A + DL G+++HS +
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 369 VTTADSE-VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESL 427
+ E V NAL+ YA+ A F +S++ + W A++ A F +S
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDA------FADSP 411
Query: 428 KLFS------EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM---SSIY 478
K F + + +T D T S+LK N+ I K++H Y +++G +
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK 471
Query: 479 AGSALVDMYAKCGSLKDAIQIFKEMPE-RNVVSWNALISAYASNGDGEATLKLFEEM 534
G+AL+D YAKCG+++ A +IF + E R +VS+N+L+S Y ++G + LF EM
Sbjct: 472 LGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 193/394 (48%), Gaps = 11/394 (2%)
Query: 235 GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEA 294
GF T F V+ A + D+ G+ +HG K I V ++L+ Y+K + +
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 295 RKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR-RNFPFATMLSLAAN 353
+K+F +M LD V +N+++T + +E++ F+ + F + + FA +L L
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRP-EEAERIFVKLSSRCTVPWTA 412
+ D G+ +HS I + + LV NALV MYAK +A F ++ + V W A
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASA----NLASISLGKQLHSYI 468
+I+ +N ++ + F M ++ + AT A+VL A N+A S G+Q+HSY+
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS-GRQIHSYV 253
Query: 469 I-RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEAT 527
+ RS + ++ ++LV Y + G +++A +F M +++VSWN +I+ YASN +
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKA 313
Query: 528 LKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
+LF +V G PDSV+ + + C+ + G + + + L+ +++
Sbjct: 314 FQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALI 373
Query: 587 DVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
R G A + M D I W++IL++
Sbjct: 374 SFYARFGDTSAAYWAFSLMS-TKDIISWNAILDA 406
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 214/750 (28%), Positives = 356/750 (47%), Gaps = 84/750 (11%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
SN +++ Y K G+L A + F M ER+ + + ++ Y ++ + EA +L M + G
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
P VT+ L+ G N +LG C++ +D KM + +
Sbjct: 279 SPGLVTWNILIGGYN----------------QLGK------CDAAMDLMQKMETFGITAD 316
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ T+ A+I+G + G +A+ +F +M G + T + + A L
Sbjct: 317 VF---------TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
I G ++H AVK I +V VGN+L+D YSK L +ARK+F + D ++N MIT
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITG 427
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
Y G ++ LF ++Q AN+
Sbjct: 428 YCQAGYCGKAYELFTRMQ-----------------DANL------------------RPN 452
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLS-----SRCTVPWTAMISANVQNGHFEESLKLF 430
++ N ++ Y K EA +F ++ R T W +I+ +QNG +E+L+LF
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
+M+ + T S+L A ANL + +++H ++R + +AL D YAK
Sbjct: 513 RKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKS 572
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
G ++ + IF M +++++WN+LI Y +G L LF +M G P+ + +
Sbjct: 573 GDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
A G V+EG + F S+ Y ++P EH +++V + R+ + ++A + I EM +
Sbjct: 633 LAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSE 692
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKK 670
+W S L CRIH + D+A AAE LF++E + A +S I A + + K
Sbjct: 693 TPIWESFLTGCRIHGDIDMAIHAAENLFSLEP-ENTATESIVSQIYALGAKLGRSLEGNK 751
Query: 671 AMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSC 730
R+ L K SW+E+++ +H F D++ L D+L +EK + + S
Sbjct: 752 PRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSK-------LCTDVLYPLVEKMSRLDNRSD 804
Query: 731 ALHNE---DEDIKVESLKYHSERLAIAFALISTPEGS--PILVMKNLRACTDCHAAIKVI 785
+ E +E+ + E+ HSE+ A+AF LIS+ S I ++KNLR C DCH K +
Sbjct: 805 QYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYV 864
Query: 786 SKIVGREITVRDSSRFHHFKDGICSCRDYW 815
SK G +I + D+ HHFK+G CSC+DYW
Sbjct: 865 SKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 151/628 (24%), Positives = 278/628 (44%), Gaps = 88/628 (14%)
Query: 53 VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIG 112
+ G++ AR F + ++S Y K G ++ A+++FDSM ERN T++ +IG
Sbjct: 97 IHLGRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIG 154
Query: 113 GYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDS 172
YS+ +++ E KLF M + G PD F +L GC + ++ +HS V+KLG S
Sbjct: 155 AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSS 214
Query: 173 AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
+ + NS++ Y K +D A++ ++ M +RD + +N+++ Y G ++EA++L EM
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME 274
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
G T WN+ +G Y++
Sbjct: 275 KEGISPGLVT------------------------------WNILIGG-----YNQLGKCD 299
Query: 293 EARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
A L KM D ++ MI+ G+ +++++FRK+ + +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 349 SLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV 408
S + + + G ++HS A+ +VLV N+LVDMY+KC + E+A ++F + ++
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 409 PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI 468
W +MI+ Q G+ ++ +LF+ M+ N+ + T+
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW----------------------- 456
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-----ERNVVSWNALISAYASNGD 523
+ ++ Y K G +A+ +F+ M +RN +WN +I+ Y NG
Sbjct: 457 ------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ L+LF +M + P+SV+ L + AC++ L + +R + L
Sbjct: 505 KDEALELFRKMQFSRFMPNSVTILSLLPACANL-LGAKMVREIHGCVLRRNLDAIHAVKN 563
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVL 643
++ D +SG + + + M D I W+S++ +H + A LFN
Sbjct: 564 ALTDTYAKSGDIEYSRTIFLGME-TKDIITWNSLIGGYVLHGSYG----PALALFNQMKT 618
Query: 644 RDAAP-YVTMSNILAEAGQWESVGKVKK 670
+ P T+S+I+ G +V + KK
Sbjct: 619 QGITPNRGTLSSIILAHGLMGNVDEGKK 646
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/565 (24%), Positives = 260/565 (46%), Gaps = 87/565 (15%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I + ++K G SN + + G+L A + F +M R+ I+ N ++ Y + GK
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 89 ----LSIAKEIFDSMVERNAVTYTLLIGGYSK--------------------SDQFI--- 121
+ + KE+ + VT+ +LIGGY++ +D F
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 122 ------------EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
+A +F +M +G P+ VT ++ +S C+ K+I +VHS VK+G
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
V++ NSL+D Y K ++ A +++ + +D T+N++I GY G+ +A +LF
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 230 EMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
M+D N+ N ++ Y K+
Sbjct: 443 RMQDANLRP-----------------------------------NIITWNTMISGYIKNG 467
Query: 290 CLVEARKLFYKMPELDG------VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFP 343
EA LF +M E DG ++N++I Y G E++ LFRK+QF+++ +
Sbjct: 468 DEGEAMDLFQRM-EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
++L AN+L +M R++H + D+ V NAL D YAK E + IF+ +
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
++ + W ++I V +G + +L LF++M+ +T ++ T +S++ A + ++ GK+
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 464 LHSYIIRSGF--MSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYAS 520
+ Y I + + + ++ SA+V +Y + L++A+Q +EM + W + ++
Sbjct: 647 VF-YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 521 NGDGEATLKLFEEMVLLGYQPDSVS 545
+GD + + E L +P++ +
Sbjct: 706 HGDIDMAIHAAEN--LFSLEPENTA 728
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 234/513 (45%), Gaps = 43/513 (8%)
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVI 175
++ +EA K + + G+K T++ LL C D I L ++ L + V
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIH-LGRILHARFGLFTEPDVF 116
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
+ L+ Y K C+ A +++ M +R+ T++A+I Y+ E +E KLF M G
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 236 FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEAR 295
DF F +L D+ G+ IH +K + + V N++L Y+K L A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 296 KLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
K F +M E D +++N ++ AY G +E++ L +
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK------------------------- 271
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WT 411
+M ++ S +VT N L+ Y + + + A + K+ + WT
Sbjct: 272 --EMEKEGISPGLVTW--------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
AMIS + NG ++L +F +M V + T S + A + L I+ G ++HS ++
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
GF+ + G++LVDMY+KCG L+DA ++F + ++V +WN++I+ Y G +LF
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCR 591
M +P+ +++ + + G E + F M K K+ + I+ +
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 592 SGKFDKAEKLIAEMPFD---PDEIMWSSILNSC 621
+GK D+A +L +M F P+ + S+L +C
Sbjct: 502 NGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 166/347 (47%), Gaps = 13/347 (3%)
Query: 345 ATMLSLAANMLD---LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK 401
+T L L + +D + +GR LH++ + T + +V V L+ MYAKC +A ++F
Sbjct: 82 STYLKLLESCIDSGSIHLGRILHARFGLFT-EPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 402 LSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
+ R W+AMI A + + E KLF M +D V D F +L+ AN + G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASN 521
K +HS +I+ G S + ++++ +YAKCG L A + F+ M ER+V++WN+++ AY N
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 522 GDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH 581
G E ++L +EM G P V++ + + G + + M + + +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFT 319
Query: 582 YASIVDVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAEQLF 638
+ +++ L +G +A + +M P+ + S +++C K +
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 639 NMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSW 685
M + D ++ ++ ++ G+ E KV +++ + + Y+W
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV-----YTW 421
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 15/257 (5%)
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSS-- 476
+NG E+ K + + ++T+ +L++ + SI LG+ LH+ R G +
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 477 IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVL 536
++ + L+ MYAKCG + DA ++F M ERN+ +W+A+I AY+ KLF M+
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 537 LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFD 596
G PD F + C++ G VE G + +S+ + SI+ V + G+ D
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 597 KAEKLIAEMPFDPDEIMWSSILNS-CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNI 655
A K M + D I W+S+L + C+ K+++ A E + ME +P + NI
Sbjct: 234 FATKFFRRMR-ERDVIAWNSVLLAYCQNGKHEE----AVELVKEMEK-EGISPGLVTWNI 287
Query: 656 LAEAGQWESVGKVKKAM 672
L G + +GK AM
Sbjct: 288 L--IGGYNQLGKCDAAM 302
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 178/628 (28%), Positives = 331/628 (52%), Gaps = 42/628 (6%)
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM---HCVDLAS 194
DY F+++L C K Q+HS + G L +C H V A
Sbjct: 33 DYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGH-VSYAY 88
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
+L+ ++P+ D V +N +I G++ + E ++L++ M G TF +L G+ D
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL-NGLKRD 147
Query: 255 D--IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
+A G+++H + VK L N++V NAL+ YS + AR +F + + D S+N+M
Sbjct: 148 GGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLM 207
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
I+ Y +ESI L +++ + +LS + + D + +++H
Sbjct: 208 ISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT 267
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH---------- 422
+ + + NALV+ YA C + A RIF + +R + WT+++ V+ G+
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 423 ---------------------FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
F ESL++F EM+ + D+ T SVL A A+L S+ +G
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASN 521
+ + +YI ++ + + G+AL+DMY KCG + A ++F +M +R+ +W A++ A+N
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 522 GDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH 581
G G+ +K+F +M + QPD +++L V +AC+H G+V++ ++F M +++ P H
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVH 507
Query: 582 YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
Y +VD+L R+G +A +++ +MP +P+ I+W ++L + R+H ++ +A+ AA+++ +E
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKN 701
+ A Y + NI A +W+ + +V++ + + + K P +S +E+ H F A DK+
Sbjct: 568 P-DNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKS 626
Query: 702 HPQMKEIILKIDILSEQMEKEGYVPDTS 729
H Q +EI +K++ L+++ Y+PDTS
Sbjct: 627 HLQSEEIYMKLEELAQESTFAAYLPDTS 654
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 244/517 (47%), Gaps = 42/517 (8%)
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
G +S A ++F + E + V + +I G+SK D E +L++ M + G PD TF LL
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 147 SGCN-DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
+G D + ++H HVVK G S + + N+L+ Y +D+A ++ + D
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGY 265
++N +I+GY +E+I+L +EM + T VL A + D +++H Y
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 266 AVKTTLIWNVFVGNALLDFYS-------------------------------KHDCLVEA 294
+ ++ + NAL++ Y+ + L A
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 295 RKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANM 354
R F +MP D +S+ +MI Y G ES+ +FR++Q F ++L+ A++
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
L++G + + ++V+V NAL+DMY KC E+A+++F + R WTAM+
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG-- 472
NG +E++K+F +M+ ++ D T+ VL A + + ++ + +RS
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAK-MRSDHR 500
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLF 531
S+ +VDM + G +K+A +I ++MP N + W AL+ A + D E +L
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHND-EPMAELA 559
Query: 532 EEMVLLGYQPDS---VSFLC-VFTACSHWGLVEEGLR 564
+ + L +PD+ + LC ++ C W + E R
Sbjct: 560 AKKI-LELEPDNGAVYALLCNIYAGCKRWKDLREVRR 595
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 198/434 (45%), Gaps = 62/434 (14%)
Query: 39 DPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDS 98
+PS N + G++ A +F M R+ IS ++ GY++ G L +A+ FD
Sbjct: 268 EPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 99 MVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGL 158
M R+ +++T++I GY ++ F E+ ++F M +G PD T V++L+ C ++
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 159 FQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANE 218
+ +++ K + V++ N+LID Y K C + A +++ +M QRD T+ A++ G AN
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 219 GFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVG 278
G +EAIK+F +M+D+ + D T+ VL A
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSA----------------------------- 478
Query: 279 NALLDFYSKHDCLV-EARKLFYKM-------PELDGVSYNMMITAYAWTGLIKESINLFR 330
H +V +ARK F KM P L V Y M+ GL+KE+ + R
Sbjct: 479 -------CNHSGMVDQARKFFAKMRSDHRIEPSL--VHYGCMVDMLGRAGLVKEAYEILR 529
Query: 331 KLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCR 390
K+ + + + +L + D M +L ++ I+ V L ++YA C+
Sbjct: 530 KMPM---NPNSIVWGALLGASRLHNDEPMA-ELAAKKILELEPDNGAVYALLCNIYAGCK 585
Query: 391 RPE---EAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV------TAD 441
R + E R V ++ + T P ++I N F K S ++ + + A
Sbjct: 586 RWKDLREVRRKIVDVAIKKT-PGFSLIEVNGFAHEFVAGDK--SHLQSEEIYMKLEELAQ 642
Query: 442 QATFASVLKASANL 455
++TFA+ L ++ L
Sbjct: 643 ESTFAAYLPDTSEL 656
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 179/418 (42%), Gaps = 64/418 (15%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
+VK G + N + G + AR +FD+ + S N+MIS
Sbjct: 161 VVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS----------- 209
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP 152
GY++ ++ E+ +L V M R+ P VT + +LS C+
Sbjct: 210 --------------------GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKV 249
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK-------------- 198
K +VH +V + + ++ + N+L+++Y +D+A ++++
Sbjct: 250 KDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 309
Query: 199 -----------------EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
+MP RD +++ +I GY G E++++F EM+ G +F
Sbjct: 310 KGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 242 TFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
T +VL A L + G+ I Y K + +V VGNAL+D Y K C +A+K+F+ M
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR 361
+ D ++ M+ A G +E+I +F ++Q + + +LS + + R
Sbjct: 430 DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQAR 489
Query: 362 QLHSQAIVTTADSEVLVA-NALVDMYAKCRRPEEAERIFVKLS-SRCTVPWTAMISAN 417
+ ++ LV +VDM + +EA I K+ + ++ W A++ A+
Sbjct: 490 KFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGAS 547
>AT1G06145.1 | Symbols: EMB1444 | EMB1444 (EMBRYO DEFECTIVE 1444) |
chr1:1867129-1868862 REVERSE
Length = 577
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/585 (29%), Positives = 310/585 (52%), Gaps = 46/585 (7%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
++ C+ PK+++ + ++K + + N I + +DLA +M + +
Sbjct: 34 IIKQCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 90
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
YNAL G+ +++L++ M S +T+ +++ A FG+ +
Sbjct: 91 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQA 148
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
+ K ++V + L+DFYS + EARK+F +MPE D + AWT
Sbjct: 149 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDI---------AWT----- 194
Query: 325 SINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
TM+S +LD+ L +Q ++ +N L++
Sbjct: 195 ---------------------TMVSAYRRVLDMDSANSLANQ----MSEKNEATSNCLIN 229
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
Y E+AE +F ++ + + WT MI QN + E++ +F +M + + D+ T
Sbjct: 230 GYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 289
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
++V+ A A+L + +GK++H Y +++GF+ +Y GSALVDMY+KCGSL+ A+ +F +P
Sbjct: 290 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 349
Query: 505 ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLR 564
++N+ WN++I A++G + LK+F +M + +P++V+F+ VFTAC+H GLV+EG R
Sbjct: 350 KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRR 409
Query: 565 YFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
+ SM Y +V EHY +V + ++G +A +LI M F+P+ ++W ++L+ CRIH
Sbjct: 410 IYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 469
Query: 625 KNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKV-PAY 683
KN +A+ A +L +E + ++ Y + ++ AE +W V +++ MRE G+ K+ P
Sbjct: 470 KNLVIAEIAFNKLMVLEPM-NSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGT 528
Query: 684 SWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDT 728
S + I + H+F A DK+H E+ L +D + +QM GYV +T
Sbjct: 529 SSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 573
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 156/321 (48%), Gaps = 33/321 (10%)
Query: 14 SSLAAKNSYPN-VKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRN 72
SSL +S+ + + A I K GF I TG++ EAR++FD+MP R+
Sbjct: 130 SSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERD 189
Query: 73 TI-------------------------------SSNVMISGYLKEGKLSIAKEIFDSMVE 101
I +SN +I+GY+ G L A+ +F+ M
Sbjct: 190 DIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPV 249
Query: 102 RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQV 161
++ +++T +I GYS++ ++ EA +F +M G PD VT T++S C +++ +V
Sbjct: 250 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 309
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFN 221
H + ++ G V I ++L+D Y K ++ A ++ +P+++ +N++I G A GF
Sbjct: 310 HMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFA 369
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT-TLIWNVFVGNA 280
+EA+K+F +M + + TF +V A + G++I+ + +++ NV
Sbjct: 370 QEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 429
Query: 281 LLDFYSKHDCLVEARKLFYKM 301
++ +SK + EA +L M
Sbjct: 430 MVHLFSKAGLIYEALELIGNM 450
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
+I Y G++ A+++FD M ER+ + +T ++ Y + A L +M
Sbjct: 165 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 224
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
N LI+ Y + ++ A L+
Sbjct: 225 ---------------------------------------NCLINGYMGLGNLEQAESLFN 245
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
+MP +D +++ +I GY+ +EAI +F +M + G + T V+ A L +
Sbjct: 246 QMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEI 305
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G+++H Y ++ + +V++G+AL+D YSK L A +F+ +P+ + +N +I A
Sbjct: 306 GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAA 365
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
G +E++ +F K++ F ++ + + + GR+++ I
Sbjct: 366 HGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 415
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 299/558 (53%), Gaps = 16/558 (2%)
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ- 195
P+ + L+S C+ ++ K Q+ + ++ +I N ++ K D AS
Sbjct: 4 PEKSVLLELISRCSSLRVFK---QIQTQLITRDLLRDDLIINKVVTFLGK--SADFASYS 58
Query: 196 ---LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
L+ S +YN L++ YA + I + GF FTF V A
Sbjct: 59 SVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGK 118
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
I G+QIHG K +++V N+L+ FY A K+F +MP D VS+ +
Sbjct: 119 FSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGI 178
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
IT + TGL KE+++ F K+ + + +L + + L +G+ +H + +
Sbjct: 179 ITGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
+ NAL+DMY KC + +A R+F +L + V W +MIS V +E++ LFS
Sbjct: 236 LISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSL 295
Query: 433 MRRDN-VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
M+ + + D SVL A A+L ++ G+ +H YI+ +G + G+A+VDMYAKCG
Sbjct: 296 MQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCG 355
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
++ A++IF + +NV +WNAL+ A +G G +L+ FEEMV LG++P+ V+FL
Sbjct: 356 YIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALN 415
Query: 552 ACSHWGLVEEGLRYFNSM-TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
AC H GLV+EG RYF+ M ++ Y L PK EHY ++D+LCR+G D+A +L+ MP PD
Sbjct: 416 ACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPD 475
Query: 611 EIMWSSILNSCRIHKN-QDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVK 669
+ +IL++C+ +L K + ++E D+ YV +SNI A +W+ V +++
Sbjct: 476 VRICGAILSACKNRGTLMELPKEILDSFLDIE-FEDSGVYVLLSNIFAANRRWDDVARIR 534
Query: 670 KAMRERGLTKVPAYSWVE 687
+ M+ +G++KVP S++E
Sbjct: 535 RLMKVKGISKVPGSSYIE 552
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 207/427 (48%), Gaps = 13/427 (3%)
Query: 103 NAVTYTLLIGGYSKSDQ---FIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF 159
++ +Y L+ Y+ D+ I A+K FV +G PD TF + C I+
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVS---NGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEG 219
Q+H V K+G + + NSL+ Y A +++ EMP RD V++ +I G+ G
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
KEA+ F +M E + T+ VL + + ++ G+ IHG +K + ++ GN
Sbjct: 187 LYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 280 ALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR 339
AL+D Y K + L +A ++F ++ + D VS+N MI+ KE+I+LF +Q + +
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 340 RNFPFAT-MLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ T +LS A++ + GR +H + + + A+VDMYAKC E A I
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 399 FVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASI 458
F + S+ W A++ +GH ESL+ F EM + + TF + L A + +
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLV 423
Query: 459 SLGKQ-LHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALI 515
G++ H R + ++D+ + G L +A+++ K MP + +V A++
Sbjct: 424 DEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAIL 483
Query: 516 SAYASNG 522
SA + G
Sbjct: 484 SACKNRG 490
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+T ++ Y K G + A EIF+ + +N T+ L+GG + +E+ + F M
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMI-KGLFQVHSH-------VVKLGHDSAVIICNSLIDS 183
+ G KP+ VTF+ L+ C ++ +G H KL H +ID
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC------MIDL 453
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTY-NALIAGYANEG----FNKEAIKLFMEMRDLGFET 238
C+ +D A +L K MP + V A+++ N G KE + F+ D+ FE
Sbjct: 454 LCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFL---DIEFED 510
Query: 239 S 239
S
Sbjct: 511 S 511
>AT1G50270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:18622044-18623834 FORWARD
Length = 596
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 289/518 (55%), Gaps = 15/518 (2%)
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
+ MR G S TF +L A L D + Q H + VK L + FV N+L+ YS
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
A +LF + D V++ MI + G E++ F +++ T ++
Sbjct: 151 SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 348 LSLAANMLDLQMGRQLHSQAIVT-TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
L A + D++ GR +H + T +V + ++LVDMY KC ++A+++F ++ SR
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
V WTA+I+ VQ+ F++ + +F EM + +V ++ T +SVL A A++ ++ G+++H
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
Y+I++ + AG+ L+D+Y KCG L++AI +F+ + E+NV +W A+I+ +A++G
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
LF M+ P+ V+F+ V +AC+H GLVEEG R F SM + + PK +HYA +V
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 587 DVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDA 646
D+ R G ++A+ LI MP +P ++W ++ SC +HK+ +L K AA ++ ++ +
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQP-SHS 509
Query: 647 APYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMK 706
Y ++N+ +E+ W+ V +V+K M+++ + K P +SW+E+K K+ F A D P
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLES 569
Query: 707 EIILK-IDILSEQMEKEGYVPDTSCALHNEDEDIKVES 743
+ + K +D + QM +PD E ED+ ES
Sbjct: 570 DDLYKTLDTVGVQMR----LPD-------ELEDVTAES 596
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 207/411 (50%), Gaps = 14/411 (3%)
Query: 123 AFKLFVRMCRSGTKPDYVTFVTLLSGC-----NDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+F + M R+G P TF LL ++P FQ H+H+VK G DS +
Sbjct: 88 SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNP------FQFHAHIVKFGLDSDPFVR 141
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
NSLI Y D AS+L+ +D VT+ A+I G+ G EA+ F+EM+ G
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLI-WNVFVGNALLDFYSKHDCLVEARK 296
++ T +VL A ++D+ FG+ +HG ++T + +VF+G++L+D Y K C +A+K
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
+F +MP + V++ +I Y + + + +F ++ + +++LS A++
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 357 LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA 416
L GR++H I + + L+D+Y KC EEA +F +L + WTAMI+
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH-SYIIRSGFMS 475
+G+ ++ LF M +V+ ++ TF +VL A A+ + G++L S R
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGE 525
+ +VD++ + G L++A + + MP E V W AL + + D E
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 171/351 (48%), Gaps = 3/351 (0%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +ISGY G A +FD +++ VT+T +I G+ ++ EA FV M ++G
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGH-DSAVIICNSLIDSYCKMHCVDLASQ 195
+ +T V++L + ++ VH ++ G V I +SL+D Y K C D A +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ EMP R+ VT+ ALIAGY + + +F EM ++ T +VL A +
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ G+++H Y +K ++ N G L+D Y K CL EA +F ++ E + ++ MI
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLH-SQAIVTTADS 374
+A G +++ +LF + + F +LS A+ ++ GR+L S +
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCT-VPWTAMISANVQNGHFE 424
+ +VD++ + EEA+ + ++ T V W A+ + + + +E
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYE 492
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
NT + +I Y+K G L A +F+ + E+N T+T +I G++ +AF LF M
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIK 156
S P+ VTF+ +LS C +++
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVE 424
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 199/674 (29%), Positives = 326/674 (48%), Gaps = 46/674 (6%)
Query: 111 IGGYSKSDQFIEAFKLF--VRMCRSGTKPDYVTF---VTLLSGCNDPKMIKGLFQVHSHV 165
+G + +AFK F +R+ S D + +LLS C D + QVH+H
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 166 VKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAI 225
+ G + ++ L+ Y + + A + + + +N LIA YA +E I
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 226 KLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY 285
+ M G FT+ +VL A D+AFG+ +HG ++ +++V NAL+ Y
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMY 189
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYD------- 338
+ + AR+LF +M E D VS+N +I YA G+ E+ LF K+ F+ +
Sbjct: 190 KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWN 249
Query: 339 ---------------------RRNFP-----FATMLSLAANML--DLQMGRQLHSQAIVT 370
RNFP A ++ L A L +++G+++H AI +
Sbjct: 250 IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHS 309
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLF 430
+ D V N L+ MY+KC+ A +F + W ++IS Q EE+ L
Sbjct: 310 SYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLL 369
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG-FMSSIYAGSALVDMYAK 489
EM + T AS+L A +A++ GK+ H YI+R F ++LVD+YAK
Sbjct: 370 REMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAK 429
Query: 490 CGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCV 549
G + A Q+ M +R+ V++ +LI Y + G+G L LF+EM G +PD V+ + V
Sbjct: 430 SGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAV 489
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDP 609
+ACSH LV EG R F M Y + P +H++ +VD+ R+G KA+ +I MP+ P
Sbjct: 490 LSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKP 549
Query: 610 DEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVK 669
W+++LN+C IH N + K AAE+L M+ + YV ++N+ A AG W + +V+
Sbjct: 550 SGATWATLLNACHIHGNTQIGKWAAEKLLEMKP-ENPGYYVLIANMYAAAGSWSKLAEVR 608
Query: 670 KAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQM-EKEGYVPDT 728
MR+ G+ K P +W++ +F D + P+ +D L++ M + GY +
Sbjct: 609 TIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYAINK 668
Query: 729 SCALHNEDEDIKVE 742
+ + DE++ E
Sbjct: 669 ---VQSSDEELLQE 679
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 226/483 (46%), Gaps = 42/483 (8%)
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
A+ I ++ + + + +LI Y+K++ F E + RM G +PD T+ ++L C +
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNAL 211
+ VH + + S++ +CN+LI Y + + +A +L+ M +RD+V++NA+
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAV 216
Query: 212 IAGYANEGFNKEAIKLFMEMRDLGFETSDFTF--------QAVLYAG------------- 250
I YA+EG EA +LF +M G E S T+ Q Y G
Sbjct: 217 INCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPT 276
Query: 251 --------IGL------DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
IGL I G++IHG A+ ++ V N L+ YSK L A
Sbjct: 277 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALI 336
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
+F + E ++N +I+ YA +E+ +L R++ + + A++L L A + +
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIAN 396
Query: 357 LQMGRQLHSQAIVTTADSE-VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
LQ G++ H + + ++ N+LVD+YAK + A+++ +S R V +T++I
Sbjct: 397 LQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLID 456
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI-IRSGFM 474
G +L LF EM R + D T +VL A ++ + G++L + G
Sbjct: 457 GYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIR 516
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGE----ATLK 529
+ S +VD+Y + G L A I MP + + +W L++A +G+ + A K
Sbjct: 517 PCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEK 576
Query: 530 LFE 532
L E
Sbjct: 577 LLE 579
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 207/448 (46%), Gaps = 40/448 (8%)
Query: 21 SYPNV-KTCID------ARIVKTGFDPSTSRSNYQIMDLV-----QTGQLSEARELFDQM 68
+YP+V K C + R+V + S+ +S+ + + + + + AR LFD+M
Sbjct: 146 TYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM 205
Query: 69 PYRNTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAF 124
R+ +S N +I+ Y EG S A E+FD M VE + +T+ ++ GG ++ ++ A
Sbjct: 206 FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGAL 265
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
L RM T D V + L C+ I+ ++H + +D + N+LI Y
Sbjct: 266 GLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMY 325
Query: 185 CKMHCVDLASQL--YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
K C DL L +++ + T+N++I+GYA ++EA L EM GF+ + T
Sbjct: 326 SK--CKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKT------TLIWNVFVGNALLDFYSKHDCLVEARK 296
++L + ++ G++ H Y ++ T++W N+L+D Y+K +V A++
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLW-----NSLVDVYAKSGKIVAAKQ 438
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
+ M + D V+Y +I Y G ++ LF+++ + + +LS ++
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKL 498
Query: 357 LQMGRQLHSQAIVTTADSEVLVA-NALVDMYAKCRRPEEAERIFVKLSSRCT-VPWTAMI 414
+ G +L + L + +VD+Y + +A+ I + + + W ++
Sbjct: 499 VHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLL 558
Query: 415 SA-----NVQNGHFEESLKLFSEMRRDN 437
+A N Q G + L EM+ +N
Sbjct: 559 NACHIHGNTQIGKWAAEKLL--EMKPEN 584
>AT2G37310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15665102-15667075 REVERSE
Length = 657
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/609 (29%), Positives = 309/609 (50%), Gaps = 42/609 (6%)
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYAN 217
+ Q+H+ +V + + LI Y + A ++ E+ R++ +YNAL+ Y +
Sbjct: 41 VLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 218 EGFNKEAIKLFMEMRDLGFETSD------FTFQAVLYAGIGLDDIAFG---QQIHGYAVK 268
+A LF+ +SD + VL A G DD G +Q+HG+ ++
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
+VFVGN ++ +Y+K D + ARK+F +M E D VS+N MI+ Y+ +G ++ +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 329 FRK-LQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
++ L + + ++ DL G ++H + I ++ + NA++ YA
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 388 KCRRPEEAERIFVKLSSRCTV-------------------------------PWTAMISA 416
KC + A +F ++S + +V W AMIS
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISG 340
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSS 476
+QN H EE + F EM R + T +S+L + +++ GK++H++ IR+G ++
Sbjct: 341 LMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 477 IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVL 536
IY ++++D YAK G L A ++F +R++++W A+I+AYA +GD ++ LF++M
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 537 LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFD 596
LG +PD V+ V +A +H G + F+SM Y + P EHYA +V VL R+GK
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 597 KAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNIL 656
A + I++MP DP +W ++LN + + ++A+ A ++LF ME + Y M+N+
Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP-ENTGNYTIMANLY 579
Query: 657 AEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILS 716
+AG+WE V+ M+ GL K+P SW+E + + F A D + + KE+ I+ L
Sbjct: 580 TQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLV 639
Query: 717 EQMEKEGYV 725
E M + Y+
Sbjct: 640 ESMSDKEYI 648
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 243/501 (48%), Gaps = 47/501 (9%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS----- 133
+IS Y ++ + A +FD + RNA +Y L+ Y+ + + +AF LF+ S
Sbjct: 63 LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSS 122
Query: 134 -GTKPDYVTF---VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHC 189
+PD ++ + LSGC+D + QVH V++ G DS V + N +I Y K
Sbjct: 123 DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG-FETSDFTFQAVLY 248
++ A +++ EM +RD V++N++I+GY+ G ++ K++ M F+ + T +V
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQ 242
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
A D+ FG ++H ++ + ++ + NA++ FY+K L AR LF +M E D V+
Sbjct: 243 ACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT 302
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA----------------------- 345
Y +I+ Y GL+KE++ LF +++ N +
Sbjct: 303 YGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS 362
Query: 346 -----TMLSLAANML---DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
T+ SL ++ +L+ G+++H+ AI AD+ + V +++D YAK A+R
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
+F R + WTA+I+A +G + + LF +M+ D T +VL A A+
Sbjct: 423 VFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGD 482
Query: 458 ISLGKQL-HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS-WNALI 515
+ + + S + + + + +V + ++ G L DA++ +MP + W AL+
Sbjct: 483 SDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALL 542
Query: 516 SAYASNGDGE----ATLKLFE 532
+ + GD E A +LFE
Sbjct: 543 NGASVLGDLEIARFACDRLFE 563
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 157/320 (49%), Gaps = 34/320 (10%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR-SGT 135
N MI+ Y K + A+++FD M ER+ V++ +I GYS+S F + K++ M S
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 136 KPDYVTFVTLLSGCNDPK-MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
KP+ VT +++ C +I GL +VH +++ + +CN++I Y K +D A
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGL-EVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYAR 289
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFET---------------- 238
L+ EM ++DSVTY A+I+GY G KEA+ LF EM +G T
Sbjct: 290 ALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEE 349
Query: 239 ---------------SDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLD 283
+ T ++L + ++ G++IH +A++ N++V +++D
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 284 FYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFP 343
Y+K L+ A+++F + +++ +ITAYA G + +LF ++Q +
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 344 FATMLSLAANMLDLQMGRQL 363
+LS A+ D M + +
Sbjct: 470 LTAVLSAFAHSGDSDMAQHI 489
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
+ G L AR LFD+M +++++ +ISGY+ G + A +F M T+ +I G
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISG 340
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
+++ E F M R G++P+ VT +LL +KG ++H+ ++ G D+
Sbjct: 341 LMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
+ + S+ID+Y K+ + A +++ R + + A+I YA G + A LF +M+
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
LG + D T AVL A D Q I
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGDSDMAQHI 489
>AT1G62260.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:22997826-22999796 REVERSE
Length = 656
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 332/660 (50%), Gaps = 66/660 (10%)
Query: 45 SNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNA 104
+N ++ ++++G ++EAR++F+++ RNT++ N MISGY+K +++ A+++FD M +R+
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV 102
Query: 105 VTYTLLIGGYSKSD--QFIE-AFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQV 161
VT+ +I GY +F+E A KLF M D ++ T++SG + I +
Sbjct: 103 VTWNTMISGYVSCGGIRFLEEARKLFDEM----PSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFN 221
K+ +AV +++I +C+ VD A L+++MP +DS AL+AG
Sbjct: 159 FE---KMPERNAVS-WSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 222 KEAIKLFMEMRDLGFETSDFTFQ-AVLYAGIG-----------LDDIA-FGQQIHGYAVK 268
EA + + L D + L G G D I HG +
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
NV N+++ Y K +V AR LF +M + D +S+N MI Y ++++ L
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFAL 334
Query: 329 FRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK 388
F ++ R HS N +V YA
Sbjct: 335 FSEMP--------------------------NRDAHSW-------------NMMVSGYAS 355
Query: 389 CRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASV 448
E A F K + TV W ++I+A +N ++E++ LF M + D T S+
Sbjct: 356 VGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSL 415
Query: 449 LKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERN 507
L AS L ++ LG Q+H ++++ + + +AL+ MY++CG + ++ +IF EM +R
Sbjct: 416 LSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKRE 474
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFN 567
V++WNA+I YA +G+ L LF M G P ++F+ V AC+H GLV+E F
Sbjct: 475 VITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFV 534
Query: 568 SMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ 627
SM VYK+ P+ EHY+S+V+V G+F++A +I MPF+PD+ +W ++L++CRI+ N
Sbjct: 535 SMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNV 594
Query: 628 DLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVE 687
LA AAE + +E + PYV + N+ A+ G W+ +V+ M + + K SWV+
Sbjct: 595 GLAHVAAEAMSRLEP-ESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 125/247 (50%), Gaps = 11/247 (4%)
Query: 21 SYPNVKTCIDARIVKTGFDPSTSRS----NYQIMDLVQTGQLSEARELFDQMPYRNTISS 76
+Y V + AR++ FD R N I V ++ +A LF +MP R+ S
Sbjct: 290 AYLKVGDVVSARLL---FDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSW 346
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N+M+SGY G + +A+ F+ E++ V++ +I Y K+ + EA LF+RM G K
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
PD T +LLS ++ Q+H VVK V + N+LI Y + + + ++
Sbjct: 407 PDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRI 465
Query: 197 YKEMP-QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY--AGIGL 253
+ EM +R+ +T+NA+I GYA G EA+ LF M+ G S TF +VL A GL
Sbjct: 466 FDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGL 525
Query: 254 DDIAFGQ 260
D A Q
Sbjct: 526 VDEAKAQ 532
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 189/662 (28%), Positives = 343/662 (51%), Gaps = 14/662 (2%)
Query: 48 QIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTY 107
QI LV T A E PY N N +IS Y++ G L A+++FD M RN V+Y
Sbjct: 115 QIHALVLTAGAGAATE----SPYAN----NNLISMYVRCGSLEQARKVFDKMPHRNVVSY 166
Query: 108 TLLIGGYSKSDQFIE-AFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV 166
L YS++ F AF L M KP+ TF +L+ C + + ++S ++
Sbjct: 167 NALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII 226
Query: 167 KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIK 226
KLG+ V++ S++ Y ++ A +++ + RD+V +N +I G ++ +
Sbjct: 227 KLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLM 286
Query: 227 LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYS 286
F M G + + FT+ VL L + G+ IH + + + ++ + NALLD Y
Sbjct: 287 FFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYC 346
Query: 287 KHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN-FPFA 345
+ EA +F ++ + VS+N +I+ + G ++++ ++R+L R + + F+
Sbjct: 347 SCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFS 406
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
+S A G+ LH Q + V V L+ MY K R E A+++F + R
Sbjct: 407 AAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER 466
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
V WT MI + + G+ E +++ F EM R+ +D + +SV+ A +++A + G+ H
Sbjct: 467 DVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFH 526
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
IR+GF + ALVDMY K G + A IF ++ WN+++ AY+ +G E
Sbjct: 527 CLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVE 586
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
L FE+++ G+ PD+V++L + ACSH G +G +N M K + +HY+ +
Sbjct: 587 KALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCM 645
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEI-MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLR 644
V+++ ++G D+A +LI + P ++ +W ++L++C +N + AAEQ+ ++
Sbjct: 646 VNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDP-E 704
Query: 645 DAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEI-KHKVHIFCANDKNHP 703
D A ++ +SN+ A G+WE V ++++ +R +K P SW+E+ + +F + D+++P
Sbjct: 705 DTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP 764
Query: 704 QM 705
++
Sbjct: 765 EV 766
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/632 (25%), Positives = 302/632 (47%), Gaps = 37/632 (5%)
Query: 67 QMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVT-------YTLLIGGYSKSDQ 119
+ PY N N +IS Y++ L A+++FD M +RN VT + + G S Q
Sbjct: 20 EYPYAN----NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQ 75
Query: 120 FIE--AFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV--- 174
I+ +F++ M + + V L C ++K Q+H+ V+ G +A
Sbjct: 76 IIKLGSFQMIFFMPLNEIAS---SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESP 132
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYA-NEGFNKEAIKLFMEMRD 233
N+LI Y + ++ A +++ +MP R+ V+YNAL + Y+ N F A L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
+ + TF +++ L+D+ G ++ +K NV V ++L YS L
Sbjct: 193 EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
AR++F + D V++N MI I++ + FR + + D F ++ +L+ +
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
+ +G+ +H++ IV+ + +++ + NAL+DMY C EA +F ++ + V W ++
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 414 ISANVQNGHFEESLKLFSE-MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
IS +NG E+++ ++ +R D+ TF++ + A+A GK LH + + G
Sbjct: 373 ISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLG 432
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFE 532
+ S++ G+ L+ MY K + A ++F M ER+VV W +I ++ G+ E ++ F
Sbjct: 433 YERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHY-------ASI 585
EM + D S V ACS ++ +G +V+ + R + ++
Sbjct: 493 EMYREKNRSDGFSLSSVIGACSDMAMLRQG--------EVFHCLAIRTGFDCVMSVCGAL 544
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD 645
VD+ ++GK++ AE + + + +PD W+S+L + H + A EQ+ + D
Sbjct: 545 VDMYGKNGKYETAETIFS-LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPD 603
Query: 646 AAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
A Y+++ + G + M+E+G+
Sbjct: 604 AVTYLSLLAACSHRGSTLQGKFLWNQMKEQGI 635
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/375 (18%), Positives = 145/375 (38%), Gaps = 67/375 (17%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ ++ K G++ S + + + A+++FD M R+ + MI G+ + G
Sbjct: 424 LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGN 483
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+ A + F+ M R + D + +++
Sbjct: 484 SEL-------------------------------AVQFFIEMYREKNRSDGFSLSSVIGA 512
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C+D M++ H ++ G D + +C +L+D Y K + A ++ D +
Sbjct: 513 CSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCW 572
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
N+++ Y+ G ++A+ F ++ + GF T+ ++L A G ++
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC----------SHRGSTLQ 622
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
+WN + + + C+V N++ A GL+ E++ L
Sbjct: 623 GKFLWNQMKEQGIKAGFKHYSCMV-----------------NLVSKA----GLVDEALEL 661
Query: 329 FRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV-DMYA 387
Q + + + T+LS N +LQ+G L++ + D E + L+ ++YA
Sbjct: 662 IE--QSPPGNNQAELWRTLLSACVNTRNLQIG--LYAAEQILKLDPEDTATHILLSNLYA 717
Query: 388 KCRRPEEAERIFVKL 402
R E+ + K+
Sbjct: 718 VNGRWEDVAEMRRKI 732
>AT1G31430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11254025-11255737 REVERSE
Length = 570
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 294/538 (54%), Gaps = 39/538 (7%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
YN ++ A+ + + LF E+R G +FT VL + L + G+++HGYAV
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
K L ++ +V N+L+ Y+ + K+F +MP+ D VS+N +I++Y G +++I
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 328 LFRKL-QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
+F+++ Q + + LS + + +L++G +++ + +VT + V + NALVDM+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMF 192
Query: 387 AKCR-------------------------------RPEEAERIFVKLSSRCTVPWTAMIS 415
KC R +EA +F + + V WTAM++
Sbjct: 193 CKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMN 252
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
VQ F+E+L+LF M+ + D S+L A ++ GK +H YI +
Sbjct: 253 GYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV 312
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV 535
G+ALVDMYAKCG ++ A+++F E+ ER+ SW +LI A NG L L+ EM
Sbjct: 313 DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME 372
Query: 536 LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKF 595
+G + D+++F+ V TAC+H G V EG + F+SMT+ + + PK EH + ++D+LCR+G
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLL 432
Query: 596 DKAEKLIAEMPFDPDEIM---WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM 652
D+AE+LI +M + DE + + S+L++ R + N +A+R AE+L +EV D++ + +
Sbjct: 433 DEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV-SDSSAHTLL 491
Query: 653 SNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDK--NHPQMKEI 708
+++ A A +WE V V++ M++ G+ K P S +EI H F D +HP+M EI
Sbjct: 492 ASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEI 549
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 221/489 (45%), Gaps = 40/489 (8%)
Query: 107 YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV 166
Y ++ + F + LF + G PD T +L + + +VH + V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 167 KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIK 226
K G + + NSL+ Y + +++ +++ EMPQRD V++N LI+ Y G ++AI
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 227 LFMEM-RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY 285
+F M ++ + + T + L A L ++ G++I+ + V T +V +GNAL+D +
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMF 192
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRK-------------- 331
K CL +AR +F M + + + M+ Y TG I E+ LF +
Sbjct: 193 CKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMN 252
Query: 332 --LQFTKYDRR---------------NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
+QF ++D NF ++L+ A L+ G+ +H
Sbjct: 253 GYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV 312
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+ +V ALVDMYAKC E A +F ++ R T WT++I NG +L L+ EM
Sbjct: 313 DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME 372
Query: 435 RDNVTADQATFASVLKASANLASISLGKQL-HSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
V D TF +VL A + ++ G+++ HS R S L+D+ + G L
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLL 432
Query: 494 KDAIQIFKEM----PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL-- 547
+A ++ +M E V + +L+SA + G+ + ++ E++ + S L
Sbjct: 433 DEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLA 492
Query: 548 CVFTACSHW 556
V+ + + W
Sbjct: 493 SVYASANRW 501
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 196/419 (46%), Gaps = 43/419 (10%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR-SG 134
SN ++ Y GK+ I ++FD M +R+ V++ LI Y + +F +A +F RM + S
Sbjct: 84 SNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESN 143
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
K D T V+ LS C+ K ++ +++ VV + +V I N+L+D +CK C+D A
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKAR 202
Query: 195 QLYKEM-------------------------------PQRDSVTYNALIAGYANEGFNK- 222
++ M P +D V + A++ GY FN+
Sbjct: 203 AVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQ--FNRF 260
Query: 223 -EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNAL 281
EA++LF M+ G +F ++L + G+ IHGY + + + VG AL
Sbjct: 261 DEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTAL 320
Query: 282 LDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN 341
+D Y+K C+ A ++FY++ E D S+ +I A G+ +++L+ +++
Sbjct: 321 VDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 342 FPFATMLSLAANMLDLQMGRQL-HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
F +L+ + + GR++ HS + + L+D+ + +EAE +
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 401 KL---SSRCTVP-WTAMISANVQNGHFEESLKLFSEMRRDNVTADQA-TFASVLKASAN 454
K+ S VP + +++SA G+ + + ++ ++ + V+ A T + + ASAN
Sbjct: 441 KMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASAN 499
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 150/293 (51%), Gaps = 6/293 (2%)
Query: 13 LSSLAAKNSYPNVKTCIDARI---VKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMP 69
+S+L+A ++ N++ I RI V T F+ S N + + G L +AR +FD M
Sbjct: 152 VSTLSACSALKNLE--IGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMR 209
Query: 70 YRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVR 129
+N M+ GY+ G++ A+ +F+ ++ V +T ++ GY + ++F EA +LF
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 130 MCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHC 189
M +G +PD V+LL+GC ++ +H ++ + ++ +L+D Y K C
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
++ A +++ E+ +RD+ ++ +LI G A G + A+ L+ EM ++G TF AVL A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 250 GIGLDDIAFGQQI-HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
+A G++I H + + + L+D + L EA +L KM
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 301/549 (54%), Gaps = 6/549 (1%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP--Q 202
LL+ + K + QVH+ V+ G + V++ +SL ++Y + + +D A+ + +P +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 203 RDSVTYNALIAGYANEG--FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
R+ ++N +++GY+ + + L+ MR F + A +GL + G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTG 320
IHG A+K L + +V +L++ Y++ + A+K+F ++P + V + +++ Y
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 321 LIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT-ADSEVLVA 379
E LF ++ T ++ N+ ++G+ +H +I + D +
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
+++DMY KCR + A ++F R V WT +IS + E+ LF +M R+++
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
+Q T A++L + ++L S+ GK +H Y+IR+G ++ +DMYA+CG+++ A +
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 500 FKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLV 559
F MPERNV+SW+++I+A+ NG E L F +M P+SV+F+ + +ACSH G V
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 560 EEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILN 619
+EG + F SMT+ Y +VP+ EHYA +VD+L R+G+ +A+ I MP P W ++L+
Sbjct: 430 KEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 620 SCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTK 679
+CRIHK DLA AE+L +ME + + YV +SNI A+AG WE V V++ M +G K
Sbjct: 490 ACRIHKEVDLAGEIAEKLLSMEPEKSSV-YVLLSNIYADAGMWEMVNCVRRKMGIKGYRK 548
Query: 680 VPAYSWVEI 688
S E+
Sbjct: 549 HVGQSATEV 557
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 233/490 (47%), Gaps = 9/490 (1%)
Query: 79 MISGYLKEGKLSIAKEIFDSMV--ERNAVTYTLLIGGYSKSDQ--FIEAFKLFVRMCRSG 134
+ + Y++ +L A F+ + +RN ++ ++ GYSKS + + L+ RM R
Sbjct: 45 LTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHC 104
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
D V + C +++ +H +K G D + SL++ Y ++ ++ A
Sbjct: 105 DGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQ 164
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
+++ E+P R+SV + L+ GY + E +LF MRD G T ++ A +
Sbjct: 165 KVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVF 224
Query: 255 DIAFGQQIHGYAVKTTLI-WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMI 313
G+ +HG +++ + I + ++ +++D Y K L ARKLF + + V + +I
Sbjct: 225 AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLI 284
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
+ +A E+ +LFR++ A +L +++ L+ G+ +H I +
Sbjct: 285 SGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIE 344
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
+ + + +DMYA+C + A +F + R + W++MI+A NG FEE+L F +M
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 434 RRDNVTADQATFASVLKASANLASISLG-KQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
+ NV + TF S+L A ++ ++ G KQ S G + + +VD+ + G
Sbjct: 405 KSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGE 464
Query: 493 LKDAIQIFKEMPERNVVS-WNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLC--V 549
+ +A MP + + S W AL+SA + + + ++ E+++ + + SV L +
Sbjct: 465 IGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNI 524
Query: 550 FTACSHWGLV 559
+ W +V
Sbjct: 525 YADAGMWEMV 534
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 62 RELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFI 121
R DQ Y +I Y+K L A+++F++ V+RN V +T LI G++K ++ +
Sbjct: 239 RSFIDQSDYLQA----SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAV 294
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
EAF LF +M R P+ T +L C+ ++ VH ++++ G + + S I
Sbjct: 295 EAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFI 354
Query: 182 DSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
D Y + + +A ++ MP+R+ ++++++I + G +EA+ F +M+ +
Sbjct: 355 DMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSV 414
Query: 242 TFQAVLYA 249
TF ++L A
Sbjct: 415 TFVSLLSA 422
>AT3G26540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9744542-9746644 REVERSE
Length = 700
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/595 (29%), Positives = 304/595 (51%), Gaps = 33/595 (5%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N I Y K G + A+E+F+ M ER+ ++ +I +++ E F++F RM R G +
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+F +L C ++ L Q+H VVK G+ V + S++D Y K + A ++
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+ E+ V++N ++ Y GFN EA+ +F +M +L + T +V+ A +
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G+ IH AVK +++ + V ++ D Y K D L AR++F + D S+ ++ Y
Sbjct: 280 EVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGY 339
Query: 317 AWTGLIKESINLF-------------------------RKLQFTKYDRR------NFPFA 345
A +GL +E+ LF L F R+ N
Sbjct: 340 AMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLV 399
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS- 404
+L++ + + D+QMG+Q H D+ V+VANAL+DMY KC + A F ++S
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL 459
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL 464
R V W A+++ + G E++L F M+ + + T A++L AN+ +++LGK +
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAI 518
Query: 465 HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDG 524
H ++IR G+ + A+VDMY+KC AI++FKE R+++ WN++I NG
Sbjct: 519 HGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 578
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
+ +LF + G +PD V+FL + AC G VE G +YF+SM+ Y + P+ EHY
Sbjct: 579 KEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDC 638
Query: 585 IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFN 639
++++ C+ G + E+ + MPFDP M + I ++C+ ++ L AA++L N
Sbjct: 639 MIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMN 693
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 250/517 (48%), Gaps = 39/517 (7%)
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
Y + L C+ ++ +V SH+V + + N I++Y K CVD A +L++
Sbjct: 61 YWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFE 120
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
EMP+RD ++NA+I A G + E ++F M G ++ +F VL + + D+
Sbjct: 121 EMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRL 180
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
+Q+H VK NV + +++D Y K + +AR++F ++ VS+N+++ Y
Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLE 240
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
G E++ +F K+ N ++++ + L L++G+ +H+ A+ + ++ +V
Sbjct: 241 MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSS-------------------------------RCT 407
+ ++ DMY KC R E A R+F + S R
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
V W AM+ V ++E+L + MR++ D T +L + ++ + +GKQ H +
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE-RNVVSWNALISAYASNGDGEA 526
I R G+ +++ +AL+DMY KCG+L+ A F++M E R+ VSWNAL++ A G E
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK-VYKL-VPKREHYAS 584
L FE M + +P + + C++ + G + + YK+ V R +
Sbjct: 481 ALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR---GA 536
Query: 585 IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
+VD+ + FD A ++ E D I+W+SI+ C
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAA-TRDLILWNSIIRGC 572
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 156/314 (49%), Gaps = 2/314 (0%)
Query: 53 VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIG 112
V+ +L AR +FDQ ++ S +SGY G A+E+FD M ERN V++ ++G
Sbjct: 309 VKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLG 368
Query: 113 GYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDS 172
GY + ++ EA M + D VT V +L+ C+ ++ Q H + + G+D+
Sbjct: 369 GYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDT 428
Query: 173 AVIICNSLIDSYCKMHCVDLASQLYKEMPQ-RDSVTYNALIAGYANEGFNKEAIKLFMEM 231
VI+ N+L+D Y K + A+ +++M + RD V++NAL+ G A G +++A+ F M
Sbjct: 429 NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL 291
+ + + S +T +L + + G+ IHG+ ++ +V + A++D YSK C
Sbjct: 489 Q-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCF 547
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
A ++F + D + +N +I G KE LF L+ + F +L
Sbjct: 548 DYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Query: 352 ANMLDLQMGRQLHS 365
+++G Q S
Sbjct: 608 IREGHVELGFQYFS 621
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/567 (31%), Positives = 300/567 (52%), Gaps = 16/567 (2%)
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
L C + +K Q+H+ +++ + I LI + +LA +++ ++ + +
Sbjct: 26 LPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGY 265
N+LI +A +A +F EM+ G +FT+ +L A G + + +H +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCL--VEARKLFYKMPELDGVSYNMMITAYAWTGLIK 323
K L +++V NAL+D YS+ L +A KLF KM E D VS+N M+ G ++
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 324 ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
++ LF ++ R + TML A ++ +L + + + + +V
Sbjct: 203 DARRLFDEMP----QRDLISWNTMLDGYARCREMSKAFELFEK----MPERNTVSWSTMV 254
Query: 384 DMYAKCRRPEEAERIFVK--LSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
Y+K E A +F K L ++ V WT +I+ + G +E+ +L +M + D
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
A S+L A +SLG ++HS + RS S+ Y +AL+DMYAKCG+LK A +F
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 502 EMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEE 561
++P++++VSWN ++ +G G+ ++LF M G +PD V+F+ V +C+H GL++E
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434
Query: 562 GLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
G+ YF SM KVY LVP+ EHY +VD+L R G+ +A K++ MP +P+ ++W ++L +C
Sbjct: 435 GIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGAC 494
Query: 622 RIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVP 681
R+H D+AK + L ++ D Y +SNI A A WE V ++ M+ G+ K
Sbjct: 495 RMHNEVDIAKEVLDNLVKLDPC-DPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPS 553
Query: 682 AYSWVEIKHKVHIFCANDKNHPQMKEI 708
S VE++ +H F DK+HP+ +I
Sbjct: 554 GASSVELEDGIHEFTVFDKSHPKSDQI 580
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/529 (28%), Positives = 262/529 (49%), Gaps = 36/529 (6%)
Query: 48 QIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEG-----KLSIAKEIFDSMVER 102
++ DL + L++ ++L Q+ RN + ++ I+ L + ++A +F+ + E
Sbjct: 22 RLQDLPKCANLNQVKQLHAQIIRRN-LHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEP 80
Query: 103 NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVH 162
N LI ++++ Q +AF +F M R G D T+ LL C+ + + +H
Sbjct: 81 NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 163 SHVVKLGHDSAVIICNSLIDSY--CKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
+H+ KLG S + + N+LID Y C V A +L+++M +RD+V++N+++ G G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 221 NKEAIKLFMEM--RDLGFETSDFTFQAVL--YAGIGLDDIAFGQQIHGYAVKTTLIWNVF 276
++A +LF EM RDL ++ +L YA AF + + T+ W+
Sbjct: 201 LRDARRLFDEMPQRDL------ISWNTMLDGYARCREMSKAF-ELFEKMPERNTVSWSTM 253
Query: 277 VGNALLDFYSKHDCLVEARKLFYKM--PELDGVSYNMMITAYAWTGLIKESINLFRKLQF 334
V YSK + AR +F KM P + V++ ++I YA GL+KE+ L ++
Sbjct: 254 VMG-----YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 335 TKYDRRNFPFATMLSLAANMLD---LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRR 391
+ F A ++S+ A + L +G ++HS + S V NAL+DMYAKC
Sbjct: 309 SGL---KFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 392 PEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKA 451
++A +F + + V W M+ +GH +E+++LFS MRR+ + D+ TF +VL +
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 452 SANLASISLG-KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVV 509
+ I G +S + + LVD+ + G LK+AI++ + MP E NVV
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485
Query: 510 SWNALISAYASNGDGEATLKLFEEMVLLGY-QPDSVSFLC-VFTACSHW 556
W AL+ A + + + ++ + +V L P + S L ++ A W
Sbjct: 486 IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDW 534
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 45/267 (16%)
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
+R + + + F L+ A+++ KQLH+ IIR ++ L+ + C
Sbjct: 7 VRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQ 66
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
A+++F ++ E NV N+LI A+A N +F EM G D+ ++ + A
Sbjct: 67 TNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA 126
Query: 553 CS--HW--------------GLVEE---------------GLRYFNSMTKVYKLVPKRE- 580
CS W GL + GL ++M K+++ + +R+
Sbjct: 127 CSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAM-KLFEKMSERDT 185
Query: 581 -HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS---CRIHKNQDLAKRAAEQ 636
+ S++ L ++G+ A +L EMP D I W+++L+ CR +++K A +
Sbjct: 186 VSWNSMLGGLVKAGELRDARRLFDEMP-QRDLISWNTMLDGYARCR-----EMSK--AFE 237
Query: 637 LFNMEVLRDAAPYVTMSNILAEAGQWE 663
LF R+ + TM ++AG E
Sbjct: 238 LFEKMPERNTVSWSTMVMGYSKAGDME 264
>AT2G04860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1706787-1708535 REVERSE
Length = 582
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/581 (30%), Positives = 296/581 (50%), Gaps = 12/581 (2%)
Query: 99 MVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGL 158
M ER+ V + LI GYS++ +A+KLF+ M + G P T V LL C +
Sbjct: 1 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60
Query: 159 FQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ--LYKEMPQRDSVTYNALIAGYA 216
VH K G + + N+LI Y K C +L S L++EM + +V++N +I Y+
Sbjct: 61 RSVHGVAAKSGLELDSQVKNALISFYSK--CAELGSAEVLFREMKDKSTVSWNTMIGAYS 118
Query: 217 NEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVF 276
G +EAI +F M + E S T +L A + + +H VK ++ ++
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDIS 172
Query: 277 VGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK 336
V +L+ YS+ CLV A +L+ + V +++ YA G + ++ F K +
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232
Query: 337 YDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAE 396
+L + +G LH AI + ++ LV N L+ MY+K E
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292
Query: 397 RIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR-RDNVTADQATFASVLKASANL 455
+F +L + W ++IS VQ+G + ++F +M + D T AS+L + L
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352
Query: 456 ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALI 515
++LGK+LH Y +R+ F + + +AL+DMYAKCG+ A +FK + +WN++I
Sbjct: 353 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMI 412
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL 575
S Y+ +G L + EM G +PD ++FL V +AC+H G V+EG F +M K + +
Sbjct: 413 SGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGI 472
Query: 576 VPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
P +HYA +V +L R+ F +A LI +M PD +W ++L++C IH+ ++ + A
Sbjct: 473 SPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVAR 532
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
++F ++ ++ YV MSN+ A W+ V +V+ M++ G
Sbjct: 533 KMFMLD-YKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 572
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 241/526 (45%), Gaps = 21/526 (3%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGK 88
+++ GF PS + + Q G +S+ R + ++ N +IS Y K +
Sbjct: 32 MLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE 91
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L A+ +F M +++ V++ +IG YS+S EA +F M + VT + LLS
Sbjct: 92 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 151
Query: 149 --CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
++P +H VVK G + + + SL+ +Y + C+ A +LY Q V
Sbjct: 152 HVSHEP--------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIV 203
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
++++ YA +G A+ F + R L + +L+ I G +HGYA
Sbjct: 204 GLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYA 263
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
+K+ L V N L+ YSK D + LF ++ E +S+N +I+ +G +
Sbjct: 264 IKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAF 323
Query: 327 NLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDM 385
+F ++ T + A++L+ + + L +G++LH + ++E V AL+DM
Sbjct: 324 EVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDM 383
Query: 386 YAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATF 445
YAKC +AE +F + + CT W +MIS +G +L + EMR + D+ TF
Sbjct: 384 YAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 443
Query: 446 ASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM- 503
VL A + + GK +I+ G ++ + +V + + +A+ + +M
Sbjct: 444 LGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD 503
Query: 504 --PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
P+ V W AL+SA + + E + +M +L Y+ + L
Sbjct: 504 IKPDSAV--WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVL 547
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 286/548 (52%), Gaps = 16/548 (2%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYC----KMHCVDLASQLYKEM 200
+LS + + + L Q+H ++K VI + LID +C + + A +++ +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLID-FCTTCPETMNLSYARSVFESI 67
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
+N++I GY+N +A+ + EM G+ FTF VL A GL DI FG
Sbjct: 68 DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTG 320
+HG+ VKT N++V LL Y + ++F +P+ + V++ +I+ +
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187
Query: 321 LIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN 380
++I FR++Q +L D + V++A
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFD---------PYFQSKVGFNVILAT 238
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA 440
+L+DMYAKC A +F + R V W ++I+ QNG EE+L +F +M +
Sbjct: 239 SLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAP 298
Query: 441 DQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
D+ TF SV++AS LG+ +H+Y+ ++GF+ ALV+MYAK G + A + F
Sbjct: 299 DKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAF 358
Query: 501 KEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLV 559
+++ +++ ++W +I AS+G G L +F+ M G PD +++L V ACSH GLV
Sbjct: 359 EDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLV 418
Query: 560 EEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILN 619
EEG RYF M ++ L P EHY +VD+L R+G+F++AE+L+ MP P+ +W ++LN
Sbjct: 419 EEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLN 478
Query: 620 SCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTK 679
C IH+N +L R + E L + YV +SNI A+AG+W V ++++M+ + + K
Sbjct: 479 GCDIHENLELTDRIRSMVAEPEEL-GSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDK 537
Query: 680 VPAYSWVE 687
V +S VE
Sbjct: 538 VLGHSSVE 545
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 215/433 (49%), Gaps = 12/433 (2%)
Query: 88 KLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
LS A+ +F+S+ + + +I GYS S +A + M R G PDY TF +L
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C+ + I+ VH VVK G + + + L+ Y V+ ++++++PQ + V
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+ +LI+G+ N +AI+ F EM+ G + ++ +L +A G+ Y
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL--------VACGRCFDPY-F 226
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
++ + +NV + +L+D Y+K L AR LF MPE VS+N +IT Y+ G +E++
Sbjct: 227 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 286
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
+F + F +++ + Q+G+ +H+ T + + ALV+MYA
Sbjct: 287 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 346
Query: 388 KCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR-RDNVTADQATFA 446
K E A++ F L + T+ WT +I +GH E+L +F M+ + N T D T+
Sbjct: 347 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 406
Query: 447 SVLKASANLASISLGKQLHSYIIR-SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
VL A +++ + G++ + + G ++ +VD+ ++ G ++A ++ K MP
Sbjct: 407 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 466
Query: 506 R-NVVSWNALISA 517
+ NV W AL++
Sbjct: 467 KPNVNIWGALLNG 479
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 180/367 (49%), Gaps = 18/367 (4%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N S ++ Y+ G+++ +F+ + + N V + LI G+ +++F +A + F M
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
+G K + V LL C + FQ K+G + VI+ SLID Y K +
Sbjct: 201 SNGVKANETIMVDLLVACG--RCFDPYFQ-----SKVGFN--VILATSLIDMYAKCGDLR 251
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A L+ MP+R V++N++I GY+ G +EA+ +F++M DLG TF +V+ A +
Sbjct: 252 TARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASM 311
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
GQ IH Y KT + + + AL++ Y+K A+K F + + D +++ +
Sbjct: 312 IQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTV 371
Query: 312 MITAYAWTGLIKESINLFRKLQFT-KYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI-V 369
+I A G E++++F+++Q + +L +++ ++ G++ ++ +
Sbjct: 372 VIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDL 431
Query: 370 TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMISANVQNG-HFEESL 427
+ V +VD+ ++ R EEAER+ + + V W A++ NG E+L
Sbjct: 432 HGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL-----NGCDIHENL 486
Query: 428 KLFSEMR 434
+L +R
Sbjct: 487 ELTDRIR 493
>AT4G19220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10505266-10508121 REVERSE
Length = 932
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 182/628 (28%), Positives = 322/628 (51%), Gaps = 30/628 (4%)
Query: 69 PYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFV 128
P + N +IS Y K G A+ +F+ +V R+ ++ ++ G++ + F EAF +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 129 RM-CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDS-AVIICNSLIDSYCK 186
+M +PD T V++ S C D + VH + V++ S A+ + NS+ID Y K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 187 MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF---TF 243
A L+K RD V++N++I+ ++ GF +A LF E+ + S F T
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS-EYSCSKFSLSTV 500
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
A+L + D + FG+ +H + K + + F+ + + + E R L
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL---------RLETMSETRDL------ 545
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNF-PFATMLSLAANMLDLQMGRQ 362
S+N +I+ A +G ES+ F+ + R + +S + N+ + GR
Sbjct: 546 ---TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH 422
H AI + + + + N L+ MY +C+ E A ++F +S W +ISA QN
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
E +LF ++ + ++ TF +L AS L S S G Q H ++IR GF ++ + +A
Sbjct: 663 GREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 483 LVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG-YQP 541
LVDMY+ CG L+ +++F+ ++ +WN++ISA+ +G GE ++LF+E+ +P
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
+ SF+ + +ACSH G ++EGL Y+ M + + + P EH IVD+L R+GK +A +
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEF 839
Query: 602 IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
I + +W ++L++C H + L K AE LF ME +A+ Y++++N G
Sbjct: 840 ITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEP-DNASYYISLANTYVGLGG 898
Query: 662 WESVGKVKKAMRERGLTKVPAYSWVEIK 689
WE +++K + + L K+P YS ++++
Sbjct: 899 WEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/661 (23%), Positives = 298/661 (45%), Gaps = 68/661 (10%)
Query: 75 SSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG 134
+S+ +++ Y + G+L + +FD + E++ + + +I +++ ++I A LF+ M G
Sbjct: 124 TSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG 183
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
+ D T + S + + + +H ++ G +CN+L++ Y K + A
Sbjct: 184 NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAE 243
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
++ M RD V++N ++ G +++++ F M G E TF V+ A ++
Sbjct: 244 CVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIE 303
Query: 255 DIAFGQQIHGYAVKT--TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
++ G+ +HG +K+ + +V VGN+++ YSK A +F ++ D +S N +
Sbjct: 304 ELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAI 363
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM---GRQLHSQAIV 369
+ +A G+ +E+ + ++Q D+ AT++S+ + DL GR +H +
Sbjct: 364 LNGFAANGMFEEAFGILNQMQ--SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVR 421
Query: 370 TTADSEVL-VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
S L V N+++DMY KC +AE +F + R V W +MISA QNG ++
Sbjct: 422 MEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKN 481
Query: 429 LFSEMRRDNVTA--DQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
LF E+ + + +T ++L + + S+ GK +H ++
Sbjct: 482 LFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL------------------ 523
Query: 487 YAKCGSLKDAIQIFKEMPE-RNVVSWNALISAYASNGDGEATLKLFEEMVLLG-YQPDSV 544
K G L A + M E R++ SWN++IS AS+G +L+ F+ M G + D +
Sbjct: 524 -QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLI 582
Query: 545 SFLCVFTACSHWGLVEEG----------LRYFN------------------SMTKVYKLV 576
+ L +A + GLV +G LR + S KV+ L+
Sbjct: 583 TLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLI 642
Query: 577 --PKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAA 634
P + ++ L ++ + +L + +P+EI + +L++ + +A
Sbjct: 643 SDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 635 EQLFNMEVLRDAAPYVT--MSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKV 692
L A P+V+ + ++ + G E+ KV R G+ + A++ V H
Sbjct: 703 CHLIRRGF--QANPFVSAALVDMYSSCGMLETGMKV---FRNSGVNSISAWNSVISAHGF 757
Query: 693 H 693
H
Sbjct: 758 H 758
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 218/466 (46%), Gaps = 36/466 (7%)
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
L+ E+P+R+ N+ FM +RD VL + +
Sbjct: 70 NLFDELPERE----------------NRTMESSFMFLRD------------VLRSFMMRT 101
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+ + +H +A+K L+ ++ + LL FY + LV + LF ++ E D + +N MIT
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
A G ++ LF ++ + + S +++ + LH AI T
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+ + NAL+++YAK AE +F + R V W +++ + NGH +SL+ F M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM--SSIYAGSALVDMYAKCGS 492
AD TF+ V+ A +++ ++LG+ LH +I+SG+ + + G++++ MY+KCG
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVFT 551
+ A +F+E+ R+V+S NA+++ +A+NG E + +M + QPD + + + +
Sbjct: 342 TEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
C EG ++ E S++D+ + G +AE L+ + D
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAE-LLFKTTTHRDL 460
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILA 657
+ W+S++++ +Q+ A+ LF V + ++S +LA
Sbjct: 461 VSWNSMISAF----SQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 289 bits (740), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/630 (26%), Positives = 315/630 (50%), Gaps = 81/630 (12%)
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
S ++ S I S K + A Q++ MP+ D+V +N ++ Y+ G ++EAI LF ++
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL 291
R + D++F A+L L ++ FG++I +++ ++ V N+L+D Y K
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 292 VEARK---------------------------------LFYKMPELDGVSYNMMITAYAW 318
+ A K +F +MP+ ++N+MI+ +A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATML-SLAANMLDLQMGRQLHSQAIVTTADSEVL 377
G ++ ++LF+++ +++ + F++++ + +A+ ++ GR +H+ + S V
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 378 VANALVDMYAK----------------------------CRRPEEAER---IFVKLSSRC 406
N+++ Y K C + E E+ +F +
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
V WT MI+ +NG E++L+ F EM + V +D + +VL A + LA + GK +H
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
+I GF Y G+ALV++YAKCG +K+A + F ++ +++VSWN ++ A+ +G +
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
LKL++ M+ G +PD+V+F+ + T CSH GLVEEG F SM K Y++ + +H ++
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 587 DVLCRSGKFDKAEKLIAE----MPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV 642
D+ R G +A+ L + + W ++L +C H + +L + + +V
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVS------KV 535
Query: 643 LRDAAP-----YVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCA 697
L+ A P +V +SN+ G+W+ V++ M ERG+ K P SW+E+ ++V F
Sbjct: 536 LKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVV 595
Query: 698 NDKNHPQMKEIILKIDILSEQMEK-EGYVP 726
D +HP+++E+ ++ L +M E + P
Sbjct: 596 GDSSHPRLEELSETLNCLQHEMRNPETFGP 625
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 141/631 (22%), Positives = 268/631 (42%), Gaps = 135/631 (21%)
Query: 44 RSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERN 103
R +I L ++G+++ AR++FD MP +T++ N M++ Y + G
Sbjct: 6 RLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQ------------- 52
Query: 104 AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHS 163
EA LF ++ S KPD +F +LS C +K ++ S
Sbjct: 53 ------------------EAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQS 94
Query: 164 HVVKLGHDSAVIICNSLIDSYCKMH------------CVD-------------------- 191
V++ G +++ + NSLID Y K C D
Sbjct: 95 LVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQF 154
Query: 192 -LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA- 249
A ++ EMP+R + +N +I+G+A+ G + + LF EM + F+ +TF +++ A
Sbjct: 155 EAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Query: 250 GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY----SKHDCLVE------------ 293
++ +G+ +H +K V N++L FY S+ D + E
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 294 ---------------ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYD 338
A ++F+ PE + V++ MIT Y G ++++ F ++ + D
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+F + +L + + L G+ +H I V NALV++YAKC +EA+R
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 399 FVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASI 458
F ++++ V W M+ A +G +++LKL+ M + D TF +L ++ +
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 459 SLGKQLHSYIIRSGFMS-SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISA 517
G + +++ + + + ++DM+ + G L +A + ++++L++
Sbjct: 455 EEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL--------ATTYSSLVTD 506
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS-HWGLVEEGLRYFNSMTKVYKLV 576
++N E LLG ACS HW E G ++KV K+
Sbjct: 507 SSNNSSWE---------TLLG-------------ACSTHWH-TELG----REVSKVLKIA 539
Query: 577 PKREHYASIV--DVLCRSGKFDKAEKLIAEM 605
E + ++ ++ C +G++ + E + EM
Sbjct: 540 EPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 158/378 (41%), Gaps = 32/378 (8%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ A ++K G+ + N + + G +A + + +S N +I +K G+
Sbjct: 227 VHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGE 286
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
A E+F E+N VT+T +I GY ++ +A + FV M +SG D+ + +L
Sbjct: 287 TEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHA 346
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C+ ++ +H ++ G + N+L++ Y K + A + + ++ +D V++
Sbjct: 347 CSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSW 406
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
N ++ + G +A+KL+ M G + + TF +L + G I VK
Sbjct: 407 NTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVK 466
Query: 269 TTLI-WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
I V ++D + + L EA+ L A ++ L+ +S N
Sbjct: 467 DYRIPLEVDHVTCMIDMFGRGGHLAEAKDL-----------------ATTYSSLVTDSSN 509
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
N + T+L + ++GR++ S+ + SE + L ++Y
Sbjct: 510 -------------NSSWETLLGACSTHWHTELGREV-SKVLKIAEPSEEMSFVLLSNLYC 555
Query: 388 KCRRPEEAERIFVKLSSR 405
R +E E + ++ R
Sbjct: 556 STGRWKEGEDVRREMVER 573
>AT2G39620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16518968-16521478 REVERSE
Length = 836
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 317/615 (51%), Gaps = 17/615 (2%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
S+ +I Y L A+ +F+ + ++ ++ ++ Y+ + F E +LF M
Sbjct: 237 SSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDV 296
Query: 136 KPDYVTFVTLLSGCN-DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
+ + V + L ++KG+ +H + V+ G V + SL+ Y K +++A
Sbjct: 297 RMNKVAAASALQAAAYVGDLVKGI-AIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAE 355
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD 254
QL+ + RD V+++A+IA Y G + EAI LF +M + + + T +VL G+
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
G+ IH YA+K + + A++ Y+K A K F ++P D V++N +
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
Y G ++ ++++ ++ + ML A D G ++ Q I DS
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLS-SRCTVPWTAMISANVQNGHFEESLKLFSEM 433
E VA+AL++M+ KC A +F K + TV W M++ + +G EE++ F +M
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
+ + + TF ++++A+A L+++ +G +HS +I+ GF S G++LVDMYAKCG +
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMI 655
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+ + + F E+ + +VSWN ++SAYA++G + LF M +PDSVSFL V +AC
Sbjct: 656 ESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIM 613
H GLVEEG R F M + +K+ + EHYA +VD+L ++G F +A +++ M +
Sbjct: 716 RHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGV 775
Query: 614 WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
W ++LNS R+H N L+ A QL +E L + Q +G+V R
Sbjct: 776 WGALLNSSRMHCNLWLSNAALCQLVKLEPLNP-----------SHYSQDRRLGEVNNVSR 824
Query: 674 ERGLTKVPAYSWVEI 688
+ KVPA SW+E+
Sbjct: 825 ---IKKVPACSWIEV 836
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 162/589 (27%), Positives = 283/589 (48%), Gaps = 13/589 (2%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS-GT 135
N +I+ Y + +++ IFDS+ + V + +I GY+++ EA F M G
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
PD +F L C K ++H + ++G +S V I +L++ YCK + A Q
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ +M +D VT+N +++G A G + A+ LF +MR + + ++ A L+
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
+ +HG +K I+ G L+D Y L A +F ++ D S+ M+ A
Sbjct: 217 SDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAA 274
Query: 316 YAWTGLIKESINLFRKLQFTKYDRR--NFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
YA G +E + LF ++ YD R A+ L AA + DL G +H A+
Sbjct: 275 YAHNGFFEEVLELFDLMR--NYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI 332
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
+V VA +L+ MY+KC E AE++F+ + R V W+AMI++ Q G +E++ LF +M
Sbjct: 333 GDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
R ++ + T SVL+ A +A+ LGK +H Y I++ S + +A++ MYAKCG
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRF 452
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
A++ F+ +P ++ V++NAL Y GD +++ M L G PDS + + + C
Sbjct: 453 SPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYA-SIVDVLCRSGKFDKAEKLIAEMPFDPDEI 612
+ G + + K H A +++++ + A L + F+ +
Sbjct: 513 AFCSDYARGSCVYGQIIK--HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTV 570
Query: 613 MWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
W+ ++N +H A+ A M+V + VT NI+ A +
Sbjct: 571 SWNIMMNGYLLHGQ---AEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 188/397 (47%), Gaps = 12/397 (3%)
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTG 320
Q+HG + + L + N L++ YS +R +F + + V +N MI Y G
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 321 LIKESINLFRKLQFTK-YDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA 379
L +E++ F + K D + F L A +D + G ++H +S+V +
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
ALV+MY K R A ++F K+ + V W M+S QNG +L LF +MR V
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
D + +++ A + L + + LH +I+ GF+ + +G L+DMY C L A +
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADLYAAESV 256
Query: 500 FKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLV 559
F+E+ ++ SW +++AYA NG E L+LF+ M + + V+ A ++ G +
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 560 EEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILN 619
+G+ + + L+ S++ + + G+ + AE+L + D D + WS+++
Sbjct: 317 VKGIAIHDYAVQ-QGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIA 374
Query: 620 SCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNIL 656
S D A + + + +A VT++++L
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNA---VTLTSVL 408
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 169/346 (48%), Gaps = 3/346 (0%)
Query: 75 SSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG 134
++ +IS Y K G+ S A + F+ + ++AV + L GY++ +AF ++ M G
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
PD T V +L C V+ ++K G DS + ++LI+ + K + A
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 195 QLYKEMP-QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
L+ + ++ +V++N ++ GY G +EA+ F +M+ F+ + TF ++ A L
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 254 DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMI 313
+ G +H ++ VGN+L+D Y+K + + K F ++ VS+N M+
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ-AIVTTA 372
+AYA GL +++LF +Q + + F ++LS + ++ G+++ +
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKI 737
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMISAN 417
++EV +VD+ K EA + ++ + +V W A+++++
Sbjct: 738 EAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSS 783
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 302/582 (51%), Gaps = 10/582 (1%)
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD-SAVIICNSLIDS 183
K F + R+ P + F+ +S K+ + + Q+H+ V+ G+ + I LI S
Sbjct: 5 KHFCMLHRTLLCPKRIKFLQSIS-----KLKRHITQIHAFVISTGNLLNGSSISRDLIAS 59
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
++ + A +++ E+PQR YN++I Y+ E ++L+ +M + TF
Sbjct: 60 CGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTF 119
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
+ A + + G+ + AV +VFV +++L+ Y K + EA LF KM +
Sbjct: 120 TMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAK 179
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
D + + M+T +A G +++ +R++Q + R +L + ++ D +MGR +
Sbjct: 180 RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHF 423
H T V+V +LVDMYAK E A R+F ++ + V W ++IS QNG
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLA 299
Query: 424 EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSAL 483
++ + EM+ D T VL A + + S+ G+ +H YI++ + + A +AL
Sbjct: 300 NKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TAL 358
Query: 484 VDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDS 543
+DMY+KCG+L + +IF+ + +++V WN +IS Y +G+G+ + LF +M +PD
Sbjct: 359 MDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDH 418
Query: 544 VSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIA 603
+F + +A SH GLVE+G +F+ M YK+ P +HY ++D+L R+G+ ++A +I
Sbjct: 419 ATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
Query: 604 EMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM-SNILAEAGQW 662
D +W ++L+ C H+N + AA ++ + D+ T+ SN A A +W
Sbjct: 479 SEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLN--PDSIGIQTLVSNFFATANKW 536
Query: 663 ESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQ 704
+ V KV+K MR + KVP YS +E+ ++ F D +H +
Sbjct: 537 KEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHE 578
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 212/433 (48%), Gaps = 3/433 (0%)
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
G++S A+++FD + +R Y +I YS+ E +L+ +M +PD TF +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
C +++ V V G+ + V +C+S+++ Y K +D A L+ +M +RD +
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
+ ++ G+A G + +A++ + EM++ GF +L A L D G+ +HGY
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESI 326
+T L NV V +L+D Y+K + A ++F +M VS+ +I+ +A GL ++
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 327 NLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
++Q + +L + + L+ GR +H I+ + + A AL+DMY
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY-ILKRHVLDRVTATALMDMY 362
Query: 387 AKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA 446
+KC + IF + + V W MIS +G+ +E + LF +M N+ D ATFA
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 447 SVLKASANLASISLGKQLHSYII-RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
S+L A ++ + G+ S +I + S L+D+ A+ G +++A+ +
Sbjct: 423 SLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKL 482
Query: 506 RNVVS-WNALISA 517
N + W AL+S
Sbjct: 483 DNALPIWVALLSG 495
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Query: 70 YRNTISSNVMISG-----YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAF 124
YR + NV++ Y K G + +A +F M+ + AV++ LI G++++ +AF
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
+ V M G +PD VT V +L C+ +K VH +++K H + +L+D Y
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR-HVLDRVTATALMDMY 362
Query: 185 CKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQ 244
K + + ++++ + ++D V +N +I+ Y G +E + LF++M + E TF
Sbjct: 363 SKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFA 422
Query: 245 AVLYA 249
++L A
Sbjct: 423 SLLSA 427
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 282 bits (722), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 282/544 (51%), Gaps = 42/544 (7%)
Query: 185 CKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQ 244
C H + S + E+ D +NA+I +++ ++A+ L M + G F+
Sbjct: 61 CVFHEYHVCSFSFGEV--EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLS 118
Query: 245 AVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL 304
VL A L + G QIHG+ KT L ++F+ N L+ Y K CL +R++F +MP+
Sbjct: 119 LVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR 178
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNF-PFATMLSLAANMLDLQMGRQL 363
D VSYN MI Y GLI + LF + +N + +M+S A D G +
Sbjct: 179 DSVSYNSMIDGYVKCGLIVSARELF---DLMPMEMKNLISWNSMISGYAQTSD---GVDI 232
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI--------- 414
S+ + +++ N+++D Y K R E+A+ +F + R V W MI
Sbjct: 233 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 292
Query: 415 ----------------------SANVQNGHFEESLKLFSEMRRD-NVTADQATFASVLKA 451
+ VQN + E+L++FS+M ++ ++ D T VL A
Sbjct: 293 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPA 352
Query: 452 SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSW 511
A L +S +H YI+ F G AL+DMY+KCGS++ A+ +F+ + +++ W
Sbjct: 353 IAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHW 412
Query: 512 NALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
NA+I A +G GE+ + ++ L +PD ++F+ V ACSH GLV+EGL F M +
Sbjct: 413 NAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR 472
Query: 572 VYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAK 631
+K+ P+ +HY +VD+L RSG + A+ LI EMP +P++++W + L +C HK + +
Sbjct: 473 KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGE 532
Query: 632 RAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHK 691
A+ L ++ + + YV +SN+ A G W+ V +V+ M+ER + K+P SW+E+ +
Sbjct: 533 LVAKHLI-LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGR 591
Query: 692 VHIF 695
VH F
Sbjct: 592 VHEF 595
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 197/454 (43%), Gaps = 48/454 (10%)
Query: 133 SGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
+G D + +L C+ +KG Q+H + K G S + + N LI Y K C+ L
Sbjct: 108 NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 167
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF----MEMRDLGFETSDFTFQAVLY 248
+ Q++ MP+RDSV+YN++I GY G A +LF MEM++L S + A
Sbjct: 168 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS 227
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
G+ + F K + W N+++D Y KH + +A+ LF MP D V+
Sbjct: 228 DGVDIASKLFADM----PEKDLISW-----NSMIDGYVKHGRIEDAKGLFDVMPRRDVVT 278
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
+ MI YA G + + LF ++ N A + +M L++ + ++
Sbjct: 279 WATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH 338
Query: 369 VTTADSEVLV--------------------------------ANALVDMYAKCRRPEEAE 396
+ D+ +++ AL+DMY+KC + A
Sbjct: 339 LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAM 398
Query: 397 RIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA 456
+F + ++ W AMI +G E + + ++ R ++ D TF VL A ++
Sbjct: 399 LVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSG 458
Query: 457 SISLGKQLHSYIIRSGFMSS-IYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNAL 514
+ G + R + + +VD+ ++ GS++ A + +EMP E N V W
Sbjct: 459 LVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTF 518
Query: 515 ISAYASNGDGEATLKLFEEMVL-LGYQPDSVSFL 547
++A + + + E + + ++L GY P S L
Sbjct: 519 LTACSHHKEFETGELVAKHLILQAGYNPSSYVLL 552
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 217/488 (44%), Gaps = 54/488 (11%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I + KTG N I ++ G L +R++FD+MP R+++S N MI GY+K G
Sbjct: 136 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 195
Query: 89 LSIAKEIFD--SMVERNAVTYTLLIGGYSKSDQFIE-AFKLFVRMCRSGTKPDYVTFVTL 145
+ A+E+FD M +N +++ +I GY+++ ++ A KLF M + D +++ ++
Sbjct: 196 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM----PEKDLISWNSM 251
Query: 146 LSGCNDPKMI---KGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
+ G I KGLF V V+ ++ID Y K+ V A L+ +MP
Sbjct: 252 IDGYVKHGRIEDAKGLFDVMPR-------RDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 304
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
RD V YN+++AGY ++ EA+++F +M ++ D T VL A L ++
Sbjct: 305 RDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 364
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
+H Y V+ +G AL+D YSK + A +F + +N MI A GL
Sbjct: 365 MHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGL 424
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
+ + ++ +++ + F +L+ + HS LV
Sbjct: 425 GESAFDMLLQIERLSLKPDDITFVGVLNACS-----------HSG----------LVKEG 463
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
L+ + RR + E + M+ ++G E + L EM V +
Sbjct: 464 LL-CFELMRRKHKIEPRLQH--------YGCMVDILSRSGSIELAKNLIEEM---PVEPN 511
Query: 442 QATFASVLKASANLASISLGKQLHSY-IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF 500
+ + L A ++ G+ + + I+++G+ S Y L +MYA G KD ++
Sbjct: 512 DVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYV--LLSNMYASFGMWKDVRRVR 569
Query: 501 KEMPERNV 508
M ER +
Sbjct: 570 TMMKERKI 577
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 34/308 (11%)
Query: 362 QLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAE--RIFVKLSSRCTVP---------W 410
Q+H + I T + +V +A RRP A+ R C+ W
Sbjct: 23 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 82
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
A+I ++ ++L L M + V+ D+ + + VLKA + L + G Q+H ++ +
Sbjct: 83 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 142
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKL 530
+G S ++ + L+ +Y KCG L + Q+F MP+R+ VS+N++I Y G + +L
Sbjct: 143 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 202
Query: 531 FEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE--HYASIVDV 588
F+ M + + + + + S + +G+ + +K++ +P+++ + S++D
Sbjct: 203 FDLMPM-----EMKNLISWNSMISGYAQTSDGV---DIASKLFADMPEKDLISWNSMIDG 254
Query: 589 LCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRA----AEQLFNMEVLR 644
+ G+ + A+ L MP D + W+++++ AK A+ LF+ R
Sbjct: 255 YVKHGRIEDAKGLFDVMP-RRDVVTWATMIDG--------YAKLGFVHHAKTLFDQMPHR 305
Query: 645 DAAPYVTM 652
D Y +M
Sbjct: 306 DVVAYNSM 313
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 258/495 (52%), Gaps = 43/495 (8%)
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
IHG + + F+ ++DF K + + A +LF ++ + YN +I AY L
Sbjct: 35 IHGLSQSS------FMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 322 IKESINLFRKL---QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
+ I ++++L F DR FPF M A++ +G+Q+H V+
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPF--MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSR-------------------------------CT 407
NAL+DMY K +A ++F ++ R
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
V WTAMIS G + E++ F EM+ + D+ + SVL + A L S+ LGK +H Y
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEAT 527
R GF+ +AL++MY+KCG + AIQ+F +M ++V+SW+ +IS YA +G+
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 528 LKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVD 587
++ F EM +P+ ++FL + +ACSH G+ +EGLRYF+ M + Y++ PK EHY ++D
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 588 VLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAA 647
VL R+GK ++A ++ MP PD +W S+L+SCR N D+A A + L +E D
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEP-EDMG 445
Query: 648 PYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKE 707
YV ++NI A+ G+WE V +++K +R + K P S +E+ + V F + D + P E
Sbjct: 446 NYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTE 505
Query: 708 IILKIDILSEQMEKE 722
I + + + + +++
Sbjct: 506 ISIVLQLFTSHQDQD 520
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 206/434 (47%), Gaps = 42/434 (9%)
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
++ F+ + N+ K I +H G + + ++D K+ +D A++L+
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIH------GLSQSSFMVTKMVDFCDKIEDMDYATRLFN 66
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIA 257
++ + YN++I Y + + I+++ ++ FE D FTF + + L
Sbjct: 67 QVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA 317
G+Q+HG+ K ++V NAL+D Y K D LV+A K+F +M E D +S+N +++ YA
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 318 ----------------------WTGLIK---------ESINLFRKLQFTKYDRRNFPFAT 346
WT +I E+++ FR++Q + +
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
+L A + L++G+ +H A + V NAL++MY+KC +A ++F ++ +
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 306
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
+ W+ MIS +G+ +++ F+EM+R V + TF +L A +++ G +
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 366
Query: 467 YIIRSGFM--SSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGD 523
++R + I L+D+ A+ G L+ A++I K MP + + W +L+S+ + G+
Sbjct: 367 -MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGN 425
Query: 524 GEATLKLFEEMVLL 537
+ L + +V L
Sbjct: 426 LDVALVAMDHLVEL 439
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 158/346 (45%), Gaps = 34/346 (9%)
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQN 420
+++++ I+ + +VD K + A R+F ++S+ + ++I A N
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 421 GHFEESLKLFSEMRRDNVT-ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
+ + ++++ ++ R + D+ TF + K+ A+L S LGKQ+H ++ + G +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA------------- 526
+AL+DMY K L DA ++F EM ER+V+SWN+L+S YA G +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 527 ------------------TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNS 568
+ F EM L G +PD +S + V +C+ G +E G ++ +
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHL 265
Query: 569 MTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQD 628
+ + + +++++ + G +A +L +M D I WS++++ H N
Sbjct: 266 YAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME-GKDVISWSTMISGYAYHGNAH 324
Query: 629 LAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
A ++ +V + ++ + + + G W+ + MR+
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 108/192 (56%)
Query: 58 LSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKS 117
L +A ++FD+M R+ IS N ++SGY + G++ AK +F M+++ V++T +I GY+
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 118 DQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
++EA F M +G +PD ++ +++L C ++ +H + + G +C
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC 279
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
N+LI+ Y K + A QL+ +M +D ++++ +I+GYA G AI+ F EM+ +
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 238 TSDFTFQAVLYA 249
+ TF +L A
Sbjct: 340 PNGITFLGLLSA 351
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 165/373 (44%), Gaps = 34/373 (9%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK-PDYVTFVTLLS 147
+ A +F+ + N Y +I Y+ + + + +++ ++ R + PD TF +
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C QVH H+ K G V+ N+LID Y K + A +++ EM +RD ++
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 208 YNALIAGYANEGFNK-------------------------------EAIKLFMEMRDLGF 236
+N+L++GYA G K EA+ F EM+ G
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
E + + +VL + L + G+ IH YA + + V NAL++ YSK + +A +
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
LF +M D +S++ MI+ YA+ G +I F ++Q K F +LS +++
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 357 LQMG-RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC-TVPWTAMI 414
Q G R + ++ L+D+ A+ + E A I + + + W +++
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Query: 415 SANVQNGHFEESL 427
S+ G+ + +L
Sbjct: 418 SSCRTPGNLDVAL 430
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 21/194 (10%)
Query: 71 RNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
+ T N +I Y K G +S A ++F M ++ ++++ +I GY+ A + F M
Sbjct: 274 KQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM 333
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIK-GL---------FQVHSHVVKLGHDSAVIICNSL 180
R+ KP+ +TF+ LLS C+ M + GL +Q+ + G L
Sbjct: 334 QRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG---------CL 384
Query: 181 IDSYCKMHCVDLASQLYKEMPQR-DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE-T 238
ID + ++ A ++ K MP + DS + +L++ G A+ + +L E
Sbjct: 385 IDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDM 444
Query: 239 SDFTFQAVLYAGIG 252
++ A +YA +G
Sbjct: 445 GNYVLLANIYADLG 458
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 282/545 (51%), Gaps = 34/545 (6%)
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEG 219
Q H +VK G +++ + N L+ +Y K+ D A +L+ EMP R+ VT+N LI G
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF---------------GQQIHG 264
+ LGF +L+ + LD ++F G Q+H
Sbjct: 117 GDTN------HRAHLGF----CYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKE 324
VK L + F +L+ FY K +VEAR++F + + D V +N ++++Y G+I E
Sbjct: 167 LMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDE 226
Query: 325 SINLFRKLQFTKYDRRN--FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
+ L + + K R F F+++LS ++ G+Q+H+ + ++ VA AL
Sbjct: 227 AFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATAL 282
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
++MYAK +A F + R V W AMI QNG E+++LF +M +N+ D+
Sbjct: 283 LNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
TFASVL + A ++I KQ+ + + + G + ++L+ Y++ G+L +A+ F
Sbjct: 343 LTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHS 402
Query: 503 MPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG 562
+ E ++VSW ++I A AS+G E +L++FE M L QPD ++FL V +ACSH GLV+EG
Sbjct: 403 IREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEG 461
Query: 563 LRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCR 622
LR F MT+ YK+ + EHY ++D+L R+G D+A ++ MP +P ++ C
Sbjct: 462 LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCN 521
Query: 623 IHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT-KVP 681
IH+ ++ K A++L +E + Y +SN G W ++K R K P
Sbjct: 522 IHEKRESMKWGAKKLLEIEPTK-PVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTP 580
Query: 682 AYSWV 686
SW+
Sbjct: 581 GCSWL 585
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 211/459 (45%), Gaps = 39/459 (8%)
Query: 67 QMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIE---- 122
Q Y + N ++ Y K + A ++FD M RN VT+ +LI G + D
Sbjct: 65 QGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAH 124
Query: 123 -AFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
F R+ + D+V+F+ L+ C D +K Q+H +VK G +S+ SL+
Sbjct: 125 LGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLV 184
Query: 182 DSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKL--FMEMRDLGFETS 239
Y K + A ++++ + RD V +NAL++ Y G EA L M F
Sbjct: 185 HFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGD 244
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY 299
FTF ++L A I G+QIH K + +++ V ALL+ Y+K + L +AR+ F
Sbjct: 245 YFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFE 300
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
M + VS+N MI +A G +E++ LF ++ FA++LS A +
Sbjct: 301 SMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWE 360
Query: 360 GRQLHSQAIVTTADSE--VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISAN 417
+Q+ QA+VT S + VAN+L+ Y++ EA F + V WT++I A
Sbjct: 361 IKQV--QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGAL 418
Query: 418 VQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF---- 473
+G EESL++F M + + D+ TF VL A + H +++ G
Sbjct: 419 ASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACS-----------HGGLVQEGLRCFK 466
Query: 474 -MSSIYAGSA-------LVDMYAKCGSLKDAIQIFKEMP 504
M+ Y A L+D+ + G + +A + MP
Sbjct: 467 RMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
>AT2G35030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14761080-14762963 REVERSE
Length = 627
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 189/691 (27%), Positives = 340/691 (49%), Gaps = 97/691 (14%)
Query: 38 FDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFD 97
F S + + Q+ +LV++ S +R Q + +I K GK++ A+++FD
Sbjct: 19 FPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEW--------LIGELCKVGKIAEARKLFD 70
Query: 98 SMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKG 157
+ ER+ VT+T +I GY K EA +LF R+ ++ + VT+ ++SG
Sbjct: 71 GLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSG--------- 118
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYAN 217
Y + + +A L++EMP+R+ V++N +I GYA
Sbjct: 119 --------------------------YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
G +A++LF EM + + + +A++ G + + +++ + + W
Sbjct: 153 SGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM---PRRDVVSWT--- 206
Query: 278 GNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKY 337
A++D +K+ + EAR+LF MPE + +S+N MIT YA I E+ LF+ +
Sbjct: 207 --AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMP---- 260
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
R+F N ++ + + R +A
Sbjct: 261 -ERDFA----------------------------------SWNTMITGFIRNREMNKACG 285
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD-NVTADQATFASVLKASANLA 456
+F ++ + + WT MI+ V+N EE+L +FS+M RD +V + T+ S+L A ++LA
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 457 SISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE--MPERNVVSWNAL 514
+ G+Q+H I +S + SAL++MY+K G L A ++F + +R+++SWN++
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 515 ISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYK 574
I+ YA +G G+ ++++ +M G++P +V++L + ACSH GLVE+G+ +F + +
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 575 LVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAA 634
L + EHY +VD+ R+G+ I + +IL++C +H +AK
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 635 EQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHI 694
+++ DA YV MSNI A G+ E +++ M+E+GL K P SWV++ + H+
Sbjct: 526 KKVLETGS-DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHL 584
Query: 695 FCANDKNHPQMKEIILKIDILSEQMEKEGYV 725
F DK+HPQ + + + L +M K V
Sbjct: 585 FVVGDKSHPQFEALDSILSDLRNKMRKNKNV 615
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 161/343 (46%), Gaps = 47/343 (13%)
Query: 30 DARIVKTGFDPSTSRSNY-----QIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYL 84
D R + FD SR N + +++ QLS A LF +MP RN +S N MI GY
Sbjct: 92 DMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYA 151
Query: 85 KEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
+ G++ A E+FD M ERN V++ ++ + + EA LF RM R D V++
Sbjct: 152 QSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTA 207
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
++ G G + + +I N++I Y + + +D A QL++ MP+RD
Sbjct: 208 MVDGLAK----NGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 205 SVTYN-------------------------------ALIAGYANEGFNKEAIKLFMEM-R 232
++N +I GY N+EA+ +F +M R
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
D + + T+ ++L A L + GQQIH K+ N V +ALL+ YSK L+
Sbjct: 324 DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 293 EARKLFYK--MPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
ARK+F + + D +S+N MI YA G KE+I ++ +++
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 22/236 (9%)
Query: 446 ASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
+SV +S N S+ L + S I S + L+ K G + +A ++F +PE
Sbjct: 16 SSVFPSSDNDRSVQLFNLVRS-IYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPE 74
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLR- 564
R+VV+W +I+ Y GD +LF+ + DS + +TA +V LR
Sbjct: 75 RDVVTWTHVITGYIKLGDMREARELFDRV-------DSRKNVVTWTA-----MVSGYLRS 122
Query: 565 -YFNSMTKVYKLVPKRE--HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
+ +++ +P+R + +++D +SG+ DKA +L EMP + + + W+S++ +
Sbjct: 123 KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP-ERNIVSWNSMVKAL 181
Query: 622 RIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
D A LF RD + M + LA+ G+ + ++ M ER +
Sbjct: 182 VQRGRID----EAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI 233
>AT2G22410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9509035-9511080 FORWARD
Length = 681
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 282/564 (50%), Gaps = 35/564 (6%)
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS---DFTFQAV 246
+D + ++ K + + ++N I G++ KE+ L+ +M G S FT+ +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
L + G I G+ +K L V NA + ++ + ARK+F + P D
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
VS+N +I Y G +++I +++ ++ + ++S + + DL G++ +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWT--------------- 411
+ + NAL+DM++KC EA RIF L R V WT
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 412 ----------------AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
AMI +VQ +++L LF EM+ N D+ T L A + L
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 456 ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALI 515
++ +G +H YI + ++ G++LVDMYAKCG++ +A+ +F + RN +++ A+I
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL 575
A +GD + F EM+ G PD ++F+ + +AC H G+++ G YF+ M + L
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 576 VPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
P+ +HY+ +VD+L R+G ++A++L+ MP + D +W ++L CR+H N +L ++AA+
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIF 695
+L ++ D+ YV + + EA WE + ++ M ERG+ K+P S +E+ V F
Sbjct: 583 KLLELDP-SDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEF 641
Query: 696 CANDKNHPQMKEIILKIDILSEQM 719
DK+ P+ ++I ++ L M
Sbjct: 642 IVRDKSRPESEKIYDRLHCLGRHM 665
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 222/484 (45%), Gaps = 40/484 (8%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG---TKPDYVTFVTL 145
L + +I + N ++ + I G+S+S+ E+F L+ +M R G ++PD+ T+ L
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
C D ++ + HV+KL + + N+ I + ++ A +++ E P RD
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGY 265
V++N LI GY G ++AI ++ M G + D T ++ + L D+ G++ + Y
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI--- 322
+ L + + NAL+D +SK + EAR++F + + VS+ MI+ YA GL+
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 323 ----------------------------KESINLFRKLQFTKYDRRNFPFATMLSLAANM 354
++++ LF+++Q + LS + +
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
L +G +H + V + +LVDMYAKC EA +F + +R ++ +TA+I
Sbjct: 403 GALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI-IRSGF 473
+G ++ F+EM + D+ TF +L A + I G+ S + R
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGE----ATL 528
+ S +VD+ + G L++A ++ + MP E + W AL+ +G+ E A
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAK 582
Query: 529 KLFE 532
KL E
Sbjct: 583 KLLE 586
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 167/362 (46%), Gaps = 9/362 (2%)
Query: 49 IMDLV-QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTY 107
+MD+ + G + EAR +FD + R +S MISGY + G L +++++FD M E++ V +
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK 167
+IGG ++ + +A LF M S TKPD +T + LS C+ + +H ++ K
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK 417
Query: 168 LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKL 227
V + SL+D Y K + A ++ + R+S+TY A+I G A G AI
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISY 477
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN--ALLDFY 285
F EM D G + TF +L A I G+ +K+ N + + ++D
Sbjct: 478 FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS-QMKSRFNLNPQLKHYSIMVDLL 536
Query: 286 SKHDCLVEARKLFYKMP-ELDGVSYNMMITAYAWTGLIKESINLFRK-LQFTKYDRRNFP 343
+ L EA +L MP E D + ++ G ++ +K L+ D +
Sbjct: 537 GRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV 596
Query: 344 FATMLSLAANML-DLQMGRQLHSQAIV--TTADSEVLVANALVDMYAKCRRPEEAERIFV 400
+ ANM D + R++ ++ V S + V + + + + E+E+I+
Sbjct: 597 LLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYD 656
Query: 401 KL 402
+L
Sbjct: 657 RL 658
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 184/429 (42%), Gaps = 36/429 (8%)
Query: 21 SYPNV-KTCIDARIVKTG-----------FDPSTSRSNYQIMDLVQTGQLSEARELFDQM 68
+YP + K C D R+ G + + N I G + AR++FD+
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 69 PYRNTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLI------GGYSKSD 118
P R+ +S N +I+GY K G+ A ++ M V+ + VT L+ G ++
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 119 QFIEAFKL-FVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+F E K +RM T P + + S C D + +F ++
Sbjct: 278 EFYEYVKENGLRM----TIPLVNALMDMFSKCGDIHEARRIFDNLE-------KRTIVSW 326
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
++I Y + +D++ +L+ +M ++D V +NA+I G ++A+ LF EM+ +
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
+ T L A L + G IH Y K +L NV +G +L+D Y+K + EA +
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
F+ + + ++Y +I A G +I+ F ++ F +LS + +
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 358 QMGRQLHSQAIVT-TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMIS 415
Q GR SQ + ++ + +VD+ + EEA+R+ + W A++
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLF 566
Query: 416 ANVQNGHFE 424
+G+ E
Sbjct: 567 GCRMHGNVE 575
>AT5G37570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:14924494-14926146 REVERSE
Length = 550
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 258/493 (52%), Gaps = 11/493 (2%)
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLD 254
+++ +P + +N LI GY+N+ E + + M M G D +TF V+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+ G +HG ++ +V VG + +DFY K L ARK+F +MPE + VS+ ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
AY +G ++E+ ++F + +R + ++ DL ++L +
Sbjct: 185 AYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDE----MPKR 236
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+++ +++D YAK A +F + W+A+I QNG E+ K+FSEM
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYI-IRSGFMSSIYAGSALVDMYAKCGSL 493
NV D+ ++ A + + L +++ SY+ R SS Y AL+DM AKCG +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
A ++F+EMP+R++VS+ +++ A +G G ++LFE+MV G PD V+F + C
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC 416
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIM 613
LVEEGLRYF M K Y ++ +HY+ IV++L R+GK +A +LI MPF+
Sbjct: 417 GQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 614 WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
W S+L C +H N ++A+ A LF +E + A YV +SNI A +W V ++ M
Sbjct: 477 WGSLLGGCSLHGNTEIAEVVARHLFELEP-QSAGSYVLLSNIYAALDRWTDVAHLRDKMN 535
Query: 674 ERGLTKVPAYSWV 686
E G+TK+ SW+
Sbjct: 536 ENGITKICGRSWI 548
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 213/442 (48%), Gaps = 26/442 (5%)
Query: 95 IFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG-TKPDYVTFVTLLSGCNDPK 153
+F+ + + LI GYS F E + +RM R+G +PD TF ++ C++
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 154 MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL--ASQLYKEMPQRDSVTYNAL 211
++ VH V+++G D V++ S +D Y K C DL A +++ EMP+R++V++ AL
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGK--CKDLFSARKVFGEMPERNAVSWTAL 182
Query: 212 IAGYANEGFNKEAIKLF--MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT 269
+ Y G +EA +F M R+LG ++ A++ + D+ +++ K
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPERNLG------SWNALVDGLVKSGDLVNAKKLFDEMPKR 236
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLF 329
+I +++D Y+K +V AR LF + +D +++ +I YA G E+ +F
Sbjct: 237 DIISY----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 330 RKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ----LHSQAIVTTADSEVLVANALVDM 385
++ F ++S + M ++ + LH + S V AL+DM
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR---MNKFSSHYVVPALIDM 349
Query: 386 YAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATF 445
AKC + A ++F ++ R V + +M+ +G E+++LF +M + + D+ F
Sbjct: 350 NAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAF 409
Query: 446 ASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
+LK + G + + + ++S S +V++ ++ G LK+A ++ K MP
Sbjct: 410 TVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Query: 505 -ERNVVSWNALISAYASNGDGE 525
E + +W +L+ + +G+ E
Sbjct: 470 FEAHASAWGSLLGGCSLHGNTE 491
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 121/218 (55%), Gaps = 5/218 (2%)
Query: 35 KTGFDPSTSRS----NYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLS 90
K+ FD R+ N + LV++G L A++LFD+MP R+ IS MI GY K G +
Sbjct: 196 KSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMV 255
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
A+++F+ + ++ LI GY+++ Q EAFK+F MC KPD V L+S C+
Sbjct: 256 SARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACS 315
Query: 151 DPKMIKGLFQVHSHV-VKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYN 209
+ +V S++ ++ S+ + +LID K +D A++L++EMPQRD V+Y
Sbjct: 316 QMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYC 375
Query: 210 ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
+++ G A G EAI+LF +M D G + F +L
Sbjct: 376 SMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/491 (33%), Positives = 275/491 (56%), Gaps = 10/491 (2%)
Query: 66 DQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFK 125
DQ+ Y N +IS ++ G L A+++FDSM E+N VT+T +I GY K EAF
Sbjct: 114 DQVIY----FGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFA 169
Query: 126 LFVRMCRSGTK-PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
LF + G + + FV LL+ C+ + QVH ++VK+G + +I+ +SL+ Y
Sbjct: 170 LFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-LIVESSLVYFY 228
Query: 185 CKMHCVDLASQL--YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
+ C +L S L + M ++D +++ A+I+ + +G +AI +F+ M + F ++FT
Sbjct: 229 AQ--CGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFT 286
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
++L A + FG+Q+H VK + +VFVG +L+D Y+K + + RK+F M
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS 346
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ 362
+ V++ +I A+A G +E+I+LFR ++ N ++L ++ L +G++
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH 422
LH+Q I + + V + + LV +Y KC +A + +L SR V WTAMIS GH
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
E+L EM ++ V + T++S LKA AN S+ +G+ +HS ++ +S+++ GSA
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 526
Query: 483 LVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
L+ MYAKCG + +A ++F MPE+N+VSW A+I YA NG LKL M G++ D
Sbjct: 527 LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 586
Query: 543 SVSFLCVFTAC 553
F + + C
Sbjct: 587 DYIFATILSTC 597
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 266/527 (50%), Gaps = 52/527 (9%)
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
+ DY L N ++IK ++H+ +K D + N+LI S ++ + A +
Sbjct: 82 RVDYALLAEWLQSSNGMRLIK---RIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARK 138
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE-TSDFTFQAVLYAGIGLD 254
++ MP++++VT+ A+I GY G EA LF + G T++ F +L
Sbjct: 139 VFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRA 198
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+ G+Q+HG VK + N+ V ++L+ FY++ L A + F M E D +S+ +I+
Sbjct: 199 EFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS 257
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
A + G ++I +F + + F ++L + L+ GRQ+HS + +
Sbjct: 258 ACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+V V +L+DMYAKC + ++F +S+R TV WT++I+A+ + G EE++ LF M+
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMK 377
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
R ++ A+ T S+L+A ++ ++ LGK+LH+ II++ ++Y GS LV +Y KCG +
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
DA + +++P R+VVSW A+IS +S G L +EM+ G +P+ ++ AC+
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 555 H-----------------------------------WGLVEEGLRYFNSMTKVYKLVPKR 579
+ G V E R F+SM P++
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM-------PEK 550
Query: 580 E--HYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSC 621
+ +++ R+G +A KL+ M F+ D+ ++++IL++C
Sbjct: 551 NLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 198/384 (51%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N I + ++ Y + G+L+ A FD M E++ +++T +I S+ I+A +F+ M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
P+ T ++L C++ K ++ QVHS VVK + V + SL+D Y K +
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
+++ M R++VT+ ++IA +A EGF +EAI LF M+ ++ T ++L A
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
+ + G+++H +K ++ NV++G+ L+ Y K +A + ++P D VS+
Sbjct: 397 SVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTA 456
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
MI+ + G E+++ +++ + F +++ L AN L +GR +HS A
Sbjct: 457 MISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH 516
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
A S V V +AL+ MYAKC EA R+F + + V W AMI +NG E+LKL
Sbjct: 517 ALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 432 EMRRDNVTADQATFASVLKASANL 455
M + D FA++L ++
Sbjct: 577 RMEAEGFEVDDYIFATILSTCGDI 600
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 168/359 (46%), Gaps = 25/359 (6%)
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
++G E++N + + +D +A + + +++ +++H+ A+ D +
Sbjct: 61 GFSGFKGENVN---QDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVI 117
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
N L+ + A ++F + + TV WTAMI ++ G +E+ LF + +
Sbjct: 118 YFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH 177
Query: 437 NVT-ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
+ ++ F +L + A LG+Q+H +++ G + ++ S+LV YA+CG L
Sbjct: 178 GIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTS 236
Query: 496 AIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
A++ F M E++V+SW A+ISA + G G + +F M+ + P+ + + ACS
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHY------ASIVDVLCRSGKFDKAEKLIAEMPFDP 609
E+ LR+ +V+ LV KR S++D+ + G+ K+ M +
Sbjct: 297 ----EKALRFGR---QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NR 348
Query: 610 DEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKV 668
+ + W+SI+ + H + + A M+ A +T+ +IL G SVG +
Sbjct: 349 NTVTWTSIIAA---HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG---SVGAL 401
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 55 TGQLSEARELFDQMPYRNTISSNVMISG-----YLKEGKLSIAKEIFDSMVERNAVTYTL 109
G L +EL Q+ +N+I NV I Y K G+ A + + R+ V++T
Sbjct: 398 VGALLLGKELHAQI-IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTA 456
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
+I G S EA M + G +P+ T+ + L C + + + +HS K
Sbjct: 457 MISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH 516
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
S V + ++LI Y K V A +++ MP+++ V++ A+I GYA GF +EA+KL
Sbjct: 517 ALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 230 EMRDLGFETSDFTFQAVL 247
M GFE D+ F +L
Sbjct: 577 RMEAEGFEVDDYIFATIL 594
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 116/277 (41%), Gaps = 44/277 (15%)
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
D+ D A A L++S + I K++H+ ++ IY G+ L+ + G L
Sbjct: 79 DSERVDYALLAEWLQSSNGMRLI---KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVY 135
Query: 496 AIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ-PDSVSFLCVFTACS 554
A ++F MPE+N V+W A+I Y G + LFE+ V G + + F+C+ CS
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 555 HWG--------------------LVEEGLRYF-------NSMTKVYKLVPKRE--HYASI 585
+VE L YF S + + ++ +++ + ++
Sbjct: 196 RRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAV 255
Query: 586 VDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV 642
+ R G KA + M F P+E SIL +C +++ A R Q+ ++ V
Sbjct: 256 ISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKAC----SEEKALRFGRQVHSLVV 311
Query: 643 LR----DAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
R D ++ ++ A+ G+ KV M R
Sbjct: 312 KRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 189/640 (29%), Positives = 309/640 (48%), Gaps = 68/640 (10%)
Query: 123 AFKLFVRMCRS-GTKPDYVTFV-------TLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV 174
F+LF C S TK D V + LL CN K QV + +++
Sbjct: 10 GFRLFGTECGSKTTKWDPVQSLQLNHQSLVLLENCNSRNQFK---QVLAQIMRFN----- 61
Query: 175 IICNSL-------IDSYCKMHCVDLASQLYKEM-PQRDSVTYNALIAGYANEGFNKEAIK 226
+IC++ + +DLA L+ P + YN +I+ ++ E
Sbjct: 62 LICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSS--KNECFG 119
Query: 227 LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA-VKTTLIWNVFVGNALLDFY 285
L+ M TF ++ A L ++ +QIH + V L ++ N+L+ FY
Sbjct: 120 LYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFY 176
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
+ A K+F +MP D S+N+MI YA G E++ L+ K+ + +
Sbjct: 177 MELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVL 236
Query: 346 TMLSLAANMLDLQMGRQLHS--QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
++L ++ D+++G+ +H + S ++++NAL+DMY KC+ A+R F +
Sbjct: 237 SLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMK 296
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEM-RRD-------------------------- 436
+ W M+ V+ G E + +F +M +RD
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFY 356
Query: 437 ------NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
V D+ T S++ +AN +S G+ +H +IR + SAL+DMY KC
Sbjct: 357 EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
G ++ A +FK E++V W ++I+ A +G+G+ L+LF M G P++V+ L V
Sbjct: 417 GIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVL 476
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIA-EMPFDP 609
TACSH GLVEEGL FN M + P+ EHY S+VD+LCR+G+ ++A+ ++ +MP P
Sbjct: 477 TACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRP 536
Query: 610 DEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVK 669
+ MW SIL++CR ++ + A+ A +L +E ++ YV +SNI A G+W K +
Sbjct: 537 SQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGG-YVLLSNIYATVGRWGYSDKTR 595
Query: 670 KAMRERGLTKVPAYSWVEIKHKVHIFCANDK-NHPQMKEI 708
+AM RG+ K YS V +H F A +K NHP+ EI
Sbjct: 596 EAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEI 635
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 160/608 (26%), Positives = 281/608 (46%), Gaps = 70/608 (11%)
Query: 36 TGFDPSTS-RSNYQIMDLVQT-GQLSEARELFDQMPYRNTI------SSNVMISGYLKEG 87
T +DP S + N+Q + L++ ++ +++ Q+ N I S + S
Sbjct: 23 TKWDPVQSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPE 82
Query: 88 KLSIAKEIFDSMVER-NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
L +AK +F + N Y +I S S E F L+ M R PD TF+ L+
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDS-AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
+ +K Q+H H++ G S + NSL+ Y ++ +A +++ MP D
Sbjct: 141 KASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDV 197
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGY 265
++N +I GYA +GF+ EA+KL+ +M G E ++T ++L L DI G+ +HG+
Sbjct: 198 SSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW 257
Query: 266 AVKTTLIW--NVFVGNALLDFYSK----------HDCLVE-------------------- 293
+ ++ N+ + NALLD Y K D + +
Sbjct: 258 IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDME 317
Query: 294 -ARKLFYKMPELDGVSYNMMITAYAWTGLIKESI-NLFRKLQF---TKYDRRNFPFATML 348
A+ +F +MP+ D VS+N ++ Y+ G + ++ LF ++ K DR +++
Sbjct: 318 AAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR--VTMVSLI 375
Query: 349 SLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV 408
S AAN +L GR +H I + +++AL+DMY KC E A +F + +
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVA 435
Query: 409 PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI 468
WT+MI+ +G+ +++L+LF M+ + VT + T +VL A ++ + G + +++
Sbjct: 436 LWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM 495
Query: 469 I-RSGFMSSIYAGSALVDMYAKCGSLKDAIQIF-KEMPERNVVS-WNALISAYASNGDGE 525
+ GF +LVD+ + G +++A I K+MP R S W +++SA D E
Sbjct: 496 KDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIE 555
Query: 526 -ATLKLFEEMVLLGYQPDS----VSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
A L L E LL +P+ V ++ WG ++ + + V K
Sbjct: 556 TAELALTE---LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMEN-----RGVKKTA 607
Query: 581 HYASIVDV 588
Y+S+V V
Sbjct: 608 GYSSVVGV 615
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 28 CIDARIVKTGFDPSTSRS----NYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGY 83
C ++ + K FD + N ++ V+ G + A+ +FDQMP R+ +S N ++ GY
Sbjct: 282 CKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGY 341
Query: 84 LKEG-KLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
K+G +E+F M V KPD VT
Sbjct: 342 SKKGCDQRTVRELFYEMTIVEKV------------------------------KPDRVTM 371
Query: 143 VTLLSG-CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
V+L+SG N+ ++ G + VH V++L + ++LID YCK ++ A ++K
Sbjct: 372 VSLISGAANNGELSHGRW-VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
++D + ++I G A G ++A++LF M++ G ++ T AVL A
Sbjct: 431 EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA 478
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 282/539 (52%), Gaps = 48/539 (8%)
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLG--HDS---AVIICNSLIDSYCKMHCVDLASQ 195
T V +LS K + + Q H+ ++K G HD+ + ++ + + K V A
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPK--TVSYAHS 95
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
+ + + T+N++I YAN + A+ +F EM ++F VL A
Sbjct: 96 ILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCG 155
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
G+QIHG +K+ L+ +VFV N L++ Y + ARK+ +MP D VS+N +++A
Sbjct: 156 FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSA 215
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
Y GL+ E+ LF +++ + NF
Sbjct: 216 YLEKGLVDEARALFDEMEERNVESWNF--------------------------------- 242
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
++ YA +EA+ +F + R V W AM++A G + E L++F++M
Sbjct: 243 ------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 436 DNV-TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
D+ D T SVL A A+L S+S G+ +H YI + G + +ALVDMY+KCG +
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
A+++F+ +R+V +WN++IS + +G G+ L++F EMV G++P+ ++F+ V +AC+
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN 416
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMW 614
H G++++ + F M+ VY++ P EHY +VD+L R GK ++AE+L+ E+P D I+
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILL 476
Query: 615 SSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
S+L +C+ + A+R A +L + LRD++ Y MSN+ A G+WE V ++ MR
Sbjct: 477 ESLLGACKRFGQLEQAERIANRLLELN-LRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 110/198 (55%), Gaps = 1/198 (0%)
Query: 53 VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIG 112
++ G + EAR LFD+M RN S N MISGY G + AKE+FDSM R+ V++ ++
Sbjct: 217 LEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVT 276
Query: 113 GYSKSDQFIEAFKLFVRMCRSGT-KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD 171
Y+ + E ++F +M T KPD T V++LS C + VH ++ K G +
Sbjct: 277 AYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE 336
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
+ +L+D Y K +D A ++++ +RD T+N++I+ + G K+A+++F EM
Sbjct: 337 IEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM 396
Query: 232 RDLGFETSDFTFQAVLYA 249
GF+ + TF VL A
Sbjct: 397 VYEGFKPNGITFIGVLSA 414
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 162/365 (44%), Gaps = 42/365 (11%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +++ Y + G IA+++ D M R+AV++ L+ Y + EA LF M
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM------ 232
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+ V N +I Y V A ++
Sbjct: 233 ---------------------------------EERNVESWNFMISGYAAAGLVKEAKEV 259
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDD 255
+ MP RD V++NA++ YA+ G E +++F +M D E D FT +VL A L
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
++ G+ +H Y K + F+ AL+D YSK + +A ++F + D ++N +I+
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISD 379
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHS-QAIVTTADS 374
+ GL K+++ +F ++ + + F +LS ++ L R+L + V +
Sbjct: 380 LSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKL-SSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
+ +VD+ + + EEAE + ++ + ++ +++ A + G E++ ++ + +
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRL 499
Query: 434 RRDNV 438
N+
Sbjct: 500 LELNL 504
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 251/465 (53%), Gaps = 37/465 (7%)
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G++IH +KT ++ + LL + K CL AR++F ++P+ +YN MI+ Y
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN-----MLDLQMGRQLHSQAIVTTAD 373
GL+KE + L +++ ++ + + +L + + +L + R +H++ I +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS-- 431
+ ++ ALVD Y K + E A +F + V T+MIS + G E++ ++F+
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 432 ------------------------------EMRRDNVTADQATFASVLKASANLASISLG 461
M+R + +TFASV+ A + L S +G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASN 521
+Q+H+ I++SG + I GS+L+DMYAKCG + DA ++F +M E+NV SW ++I Y N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 522 GDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH 581
G+ E L+LF M +P+ V+FL +ACSH GLV++G F SM + Y + PK EH
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 582 YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
YA IVD++ R+G +KA + MP PD +W+++L+SC +H N +LA AA +LF +
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWV 686
+ Y+ +SN+ A +W++V K+++ M+ R ++K SW
Sbjct: 473 ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 165/341 (48%), Gaps = 22/341 (6%)
Query: 23 PNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISG 82
P I A I+KTGF P + S ++ ++ G LS AR++FD++P + N MISG
Sbjct: 50 PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISG 109
Query: 83 YLKEGKLSIAKEIFDSMVER------NAVTYTL---LIGGYSKSDQFIEAFKL----FVR 129
YLK G + KE+ +V+R A YTL L S+ I L R
Sbjct: 110 YLKHG---LVKELL-LLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 130 MCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHC 189
+ + + D V L+ D + G + V + D V+ C S+I Y
Sbjct: 166 IIKCDVELDDVLITALV----DTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFN-KEAIKLFMEMRDLGFETSDFTFQAVLY 248
V+ A +++ +D V YNA++ G++ G K ++ +++ M+ GF + TF +V+
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
A L GQQ+H +K+ + ++ +G++LLD Y+K + +AR++F +M E + S
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
+ MI Y G +E++ LF +++ + + F LS
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALS 382
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 122/222 (54%), Gaps = 1/222 (0%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ ARI+K + + V++G+L AR +F+ M N + MISGY+ +G
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIE-AFKLFVRMCRSGTKPDYVTFVTLLS 147
+ A+EIF++ ++ V Y ++ G+S+S + + + +++ M R+G P+ TF +++
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C+ + QVH+ ++K G + + + +SL+D Y K ++ A +++ +M +++ +
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+ ++I GY G +EA++LF M++ E + TF L A
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 35 KTGFDPSTSR-----SNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKL 89
+ GF P+ S ++ + GQ A ++ Y + + ++ Y K G +
Sbjct: 266 RAGFHPNISTFASVIGACSVLTSHEVGQQVHA-QIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 90 SIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGC 149
+ A+ +FD M E+N ++T +I GY K+ EA +LF RM +P+YVTF+ LS C
Sbjct: 325 NDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 150 NDPKMIKGLFQV-------HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
+ ++ +++ +S K+ H + + +D + ++ A + + MP+
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACI------VDLMGRAGDLNKAFEFARAMPE 438
Query: 203 R-DSVTYNALIA 213
R DS + AL++
Sbjct: 439 RPDSDIWAALLS 450
>AT2G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:771641-773482 REVERSE
Length = 613
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/590 (30%), Positives = 301/590 (51%), Gaps = 50/590 (8%)
Query: 137 PDYVTFVTLLSGCND-PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
P+ TF LL C +++G +H+ VVK G V +L+ Y K+ V A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRI-LHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
+ EMP+R + NA ++G GF ++A ++F + R G + T +VL G D
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLG---GCGD 144
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
I G Q+H A+K+ V+VG +L+ YS+ V A ++F K+P V+YN I+
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 316 YAWTG---LIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
G L+ NL RK F+ + + F ++ A++L+LQ GRQLH +
Sbjct: 205 LMENGVMNLVPSVFNLMRK--FSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLS-SRCTVPWTAMISANVQNGHFEESLKLFS 431
E +V AL+DMY+KCR + A +F +L +R + W ++IS + NG E +++LF
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 432 EMRRDNVTADQATF-----------------------------------ASVLKASANLA 456
++ + + D AT+ S+L A +++
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW 382
Query: 457 SISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFK--EMPERNVVSWNAL 514
++ GK++H ++I++ I+ ++L+DMY KCG A +IF E ++ V WN +
Sbjct: 383 TLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVM 442
Query: 515 ISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYK 574
IS Y +G+ E+ +++FE + +P +F V +ACSH G VE+G + F M + Y
Sbjct: 443 ISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYG 502
Query: 575 LVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAA 634
P EH ++D+L RSG+ +A+++I +M + SS+L SCR H + L + AA
Sbjct: 503 YKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAA 561
Query: 635 EQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYS 684
+L +E + AP+V +S+I A +WE V +++ + ++ L K+P S
Sbjct: 562 MKLAELEP-ENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 240/504 (47%), Gaps = 45/504 (8%)
Query: 40 PSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM 99
P +S ++ D+VQ G++ A ++ + + ++ ++S Y+K +++ A ++ D M
Sbjct: 35 PPLLKSCAKLGDVVQ-GRILHA-QVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 100 VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF 159
ER + + G ++ +AF++F SG+ + VT ++L GC D I+G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGGM 149
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEG 219
Q+H +K G + V + SL+ Y + LA+++++++P + VTYNA I+G G
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 220 FNKEAIKLFMEMRDLGF-ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVG 278
+F MR E +D TF + A L ++ +G+Q+HG +K + VG
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 279 NALLDFYSKHDCLVEARKLFYKMPELDG-VSYNMMITAYAWTGLIKESINLFRKLQ---- 333
AL+D YSK C A +F ++ + +S+N +I+ G + ++ LF KL
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 334 -------------FTKYDR--RNFPF----------------ATMLSLAANMLDLQMGRQ 362
F++ + F F ++LS +++ L+ G++
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP--WTAMISANVQN 420
+H I A+ ++ V +L+DMY KC A RIF + + P W MIS ++
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYA 479
G E ++++F +R + V ATF +VL A ++ ++ G Q+ + G+ S
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 480 GSALVDMYAKCGSLKDAIQIFKEM 503
++D+ + G L++A ++ +M
Sbjct: 510 IGCMIDLLGRSGRLREAKEVIDQM 533
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 181/355 (50%), Gaps = 6/355 (1%)
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
L + FTF +L + L D+ G+ +H VKT +VF AL+ Y K + +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
A K+ +MPE S N ++ G +++ +F + + + A++L
Sbjct: 85 ALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG- 143
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
D++ G QLH A+ + + EV V +LV MY++C A R+F K+ + V + A
Sbjct: 144 --DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAF 201
Query: 414 ISANVQNGHFEESLKLFSEMRR-DNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
IS ++NG +F+ MR+ + + TF + + A A+L ++ G+QLH +++
Sbjct: 202 ISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKE 261
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE-RNVVSWNALISAYASNGDGEATLKLF 531
F G+AL+DMY+KC K A +F E+ + RN++SWN++IS NG E ++LF
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
E++ G +PDS ++ + + S G V E ++F M V +VP + S++
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLKCLTSLL 375
>AT3G20730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7247095-7248878 FORWARD
Length = 564
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 291/551 (52%), Gaps = 8/551 (1%)
Query: 142 FVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
++ L C+ + K L +H + + G S + + + LID Y K V A +L+ +
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
+RD V++ A+I+ ++ G++ +A+ LF EM + + FT+ +VL + L + G Q
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
IHG K N+ V +ALL Y++ + EAR F M E D VS+N MI Y
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 322 IKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN 380
S +LF +L T+ + + F F ++L + + L++ +LH AI +
Sbjct: 195 ADTSFSLF-QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIR 253
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA-NVQNGHFEESLKLFSEMRRDNVT 439
+LV+ Y KC A ++ R + TA+I+ + QN ++ +F +M R
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTK 313
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMS-SIYAGSALVDMYAKCGSLKDAIQ 498
D+ +S+LK +AS+++G+Q+H + ++S + + G++L+DMYAK G ++DA+
Sbjct: 314 MDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVL 373
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
F+EM E++V SW +LI+ Y +G+ E + L+ M +P+ V+FL + +ACSH G
Sbjct: 374 AFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQ 433
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLI--AEMPFDPDEIMWSS 616
E G + +++M + + + EH + I+D+L RSG ++A LI E W +
Sbjct: 434 TELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGA 493
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
L++CR H N L+K AA QL +ME R Y+ ++++ A G W++ +K M+E G
Sbjct: 494 FLDACRRHGNVQLSKVAATQLLSMEP-RKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Query: 677 -LTKVPAYSWV 686
K P YS V
Sbjct: 553 SCNKAPGYSLV 563
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 242/492 (49%), Gaps = 16/492 (3%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
+++I YLK+G + A+++FD + +R+ V++T +I +S+ +A LF M R K
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+ T+ ++L C D +K Q+H V K +I+ ++L+ Y + ++ A
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
+ M +RD V++NA+I GY + LF M G + FTF ++L A I + +
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCL 230
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
++HG A+K + + +L++ Y K L A KL + D +S +IT +
Sbjct: 231 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Query: 317 A-WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS- 374
+ ++ ++F+ + K ++ML + + + +GRQ+H A+ ++
Sbjct: 291 SQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF 350
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+V + N+L+DMYAK E+A F ++ + WT++I+ ++G+FE+++ L++ M
Sbjct: 351 DVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYII-RSGFMSSIYAGSALVDMYAKCGSL 493
+ + + TF S+L A ++ LG +++ +I + G + S ++DM A+ G L
Sbjct: 411 HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Query: 494 KDAIQIFKEMPERNVVS-----WNALISAYASNGDGEATLKLFEEMVLLGYQP----DSV 544
++A + + + +VS W A + A +G+ L LL +P + +
Sbjct: 471 EEAYALIR--SKEGIVSLSSSTWGAFLDACRRHGN--VQLSKVAATQLLSMEPRKPVNYI 526
Query: 545 SFLCVFTACSHW 556
+ V+ A W
Sbjct: 527 NLASVYAANGAW 538
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 189/366 (51%), Gaps = 16/366 (4%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N I + ++S Y + GK+ A+ FDSM ER+ V++ +I GY+ + +F LF M
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
G KPD TF +LL K ++ + ++H +KLG + + SL+++Y K +
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANE-GFNKEAIKLFMEMRDLGFETSDFTFQAVLYAG 250
A +L++ +RD ++ ALI G++ + +A +F +M + + + ++L
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Query: 251 IGLDDIAFGQQIHGYAVKTTLI-WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSY 309
+ + G+QIHG+A+K++ I ++V +GN+L+D Y+K + +A F +M E D S+
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSW 386
Query: 310 NMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI- 368
+I Y G +++I+L+ +++ + + F ++LS ++ ++G +++ I
Sbjct: 387 TSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMIN 446
Query: 369 --VTTADSEVLVANALVDMYAKCRRPEEAERI------FVKLSSRCTVPWTAMISANVQN 420
A E L + ++DM A+ EEA + V LSS W A + A ++
Sbjct: 447 KHGIEAREEHL--SCIIDMLARSGYLEEAYALIRSKEGIVSLSSS---TWGAFLDACRRH 501
Query: 421 GHFEES 426
G+ + S
Sbjct: 502 GNVQLS 507
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 189/695 (27%), Positives = 326/695 (46%), Gaps = 77/695 (11%)
Query: 52 LVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLI 111
L+ TG LSE N ++ +IS Y GK +++ +F + R+ + +I
Sbjct: 49 LIITGGLSE-----------NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSII 97
Query: 112 GGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG-H 170
+ + + + F M SG PD+ T ++S C + VH V+K G
Sbjct: 98 KAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGF 157
Query: 171 DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFME 230
D + S + Y K + A ++ EMP RD V + A+I+G+ G ++ + +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 231 MRDLGFET---SDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
M G + + T + A L + G+ +HG+AVK L + FV +++ FYSK
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 288 HDCLVEA----RKL---------------------------FYKMP----ELDGVSYNMM 312
EA R+L F++M DGV + +
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Query: 313 IT----------AYAWTGLIKESI-NLFRKLQFTKYDRRNF----------PFATMLSLA 351
I A+ G + S+ +++ K + + F + TML
Sbjct: 338 INELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 397
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWT 411
+L +G+ LH + T+ D + V N+L+D+Y K A R+F + + + W
Sbjct: 398 GAVL---LGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN-VITWN 453
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
AMI++ V E+++ LF M +N T ++L A N S+ G+ +H YI +
Sbjct: 454 AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 513
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLF 531
++ +AL+DMYAKCG L+ + ++F +++ V WN +IS Y +GD E+ + LF
Sbjct: 514 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 573
Query: 532 EEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCR 591
++M +P +FL + +AC+H GLVE+G + F M + Y + P +HY+ +VD+L R
Sbjct: 574 DQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSR 632
Query: 592 SGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVT 651
SG ++AE + MPF PD ++W ++L+SC H ++ R AE+ + D Y+
Sbjct: 633 SGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGY-YIM 691
Query: 652 MSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWV 686
++N+ + AG+WE + ++ MRE G+ K +S V
Sbjct: 692 LANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 726
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/589 (21%), Positives = 248/589 (42%), Gaps = 72/589 (12%)
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C+ ++ L + ++ ++ G + + + LI SY +L+S+++ + +RD +
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
N++I + + G ++ F M G FT V+ A L G +HG +K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 269 -TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
N VG + + FYSK L +A +F +MP+ D V++ +I+ + G + +
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 328 LFRKLQFTKYDRRNFPFATM---LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
K+ D T+ +N+ L+ GR LH A+ S V +++
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
Y+K P EA F +L WT++I++ ++G EES +F EM+ + D
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 445 FASVLKASANLASISLG------------------------------------------- 461
+ ++ + + G
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTM 393
Query: 462 ----------KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSW 511
K LH Y++++ +I ++L+D+Y K G L A ++F E + NV++W
Sbjct: 394 LKGYGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITW 452
Query: 512 NALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
NA+I++Y E + LF+ MV ++P S++ + + AC + G +E G
Sbjct: 453 NAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG-------QM 505
Query: 572 VYKLVPKREH------YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHK 625
+++ + + EH A+++D+ + G +K+ +L + D + W+ +++ +H
Sbjct: 506 IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF-DAGNQKDAVCWNVMISGYGMHG 564
Query: 626 NQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
+ + A +Q+ +V ++ + + AG E K+ M +
Sbjct: 565 DVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ 613
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
Query: 447 SVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER 506
SV+ +L+ SL K ++ II G +I+ S L+ YA G + ++F + R
Sbjct: 30 SVILCDQSLSLESLRKH-NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR 88
Query: 507 NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYF 566
++ WN++I A+ SNGD +L F M+L G PD + V +AC+ L +F
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE-------LLWF 141
Query: 567 NSMTKVYKLVPKREHY-------ASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILN 619
+ T V+ LV K + AS V + G A + EMP D D + W++I++
Sbjct: 142 HVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIIS 200
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEA----RELFDQMPYRNTISSNVMISGYLKEG 87
R+V F PS+ +M V TG L R + + N S +I Y K G
Sbjct: 474 RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 533
Query: 88 KLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
L ++E+FD+ +++AV + ++I GY A LF +M S KP TF+ LLS
Sbjct: 534 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 593
Query: 148 GCNDPKMI---KGLF-QVHSHVVK--LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
C ++ K LF ++H + VK L H S L+D + ++ A MP
Sbjct: 594 ACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSC------LVDLLSRSGNLEEAESTVMSMP 647
Query: 202 -QRDSVTYNALIAGYANEGFNKEAIKL 227
D V + L++ G + I++
Sbjct: 648 FSPDGVIWGTLLSSCMTHGEFEMGIRM 674
>AT4G31070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15118696-15120537 REVERSE
Length = 613
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 298/585 (50%), Gaps = 23/585 (3%)
Query: 117 SDQFI-EAFKLF-VRMCRSGTKPDYVTFVTLLSGC---NDPKMIKGLFQVHSHVVKLGHD 171
SDQF EA +L+ +++ GT +++ C +P ++ Q+H +K G D
Sbjct: 22 SDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGA--QLHCLCLKAGAD 79
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
++ NSLI Y K +++ EM RD+V+Y ++I +G EA+KL EM
Sbjct: 80 CDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM 139
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIA-FGQQIHGYA-VKTTLIWNVFVGNALLDFYSKHD 289
GF ++L + + + H V + +V + AL+D Y K D
Sbjct: 140 YFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 290 CLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNF--PFATM 347
A +F +M + VS+ MI+ + ++LFR +Q R N T+
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQ-----RENLRPNRVTL 254
Query: 348 LSLAANMLDLQMG----RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
LS+ ++L G +++H + ++ + A + MY +C + +F
Sbjct: 255 LSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSK 314
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
R V W++MIS + G E + L ++MR++ + A+ T +++ A N +S
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
+HS I++ GFMS I G+AL+DMYAKCGSL A ++F E+ E+++VSW+++I+AY +G
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGH 434
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
G L++F+ M+ G++ D ++FL + +AC+H GLVEE F K Y + EHYA
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYA 493
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLA-KRAAEQLFNMEV 642
+++L R GK D A ++ MP P +WSS+L++C H D+A K A +L E
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Query: 643 LRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVE 687
+ A YV +S I E+G + + +V++ M+ R L K +S +E
Sbjct: 554 -DNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 225/482 (46%), Gaps = 17/482 (3%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+T+ SN +IS Y K + +++FD M+ R+ V+Y +I + EA KL M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 132 RSGTKPDYVTFVTLLSGCND-------PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
G P +LL+ C +M L V + +V++ +L+D Y
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERM-----QESVLLSTALVDMY 195
Query: 185 CKMHCVDLASQLYKEMPQRDSVTYNALIAG-YANEGFNKEAIKLFMEMRDLGFETSDFTF 243
K A ++ +M ++ V++ A+I+G AN+ + + + LF M+ + T
Sbjct: 196 LKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY-EMGVDLFRAMQRENLRPNRVTL 254
Query: 244 QAVLYAGIGLD-DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+VL A + L+ + ++IHG++ + + + A + Y + + +R LF
Sbjct: 255 LSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSK 314
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ 362
D V ++ MI+ YA TG E +NL +++ + + ++S N L
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH 422
+HSQ + S +L+ NAL+DMYAKC A +F +L+ + V W++MI+A +GH
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGH 434
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
E+L++F M + D F ++L A + + + + + + ++ +
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYAC 494
Query: 483 LVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
+++ + G + DA ++ MP + + W++L+SA ++G + K+ L+ +P
Sbjct: 495 YINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANE-LMKSEP 553
Query: 542 DS 543
D+
Sbjct: 554 DN 555
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
+ ++ A L D+ + + S ++ YLK + A +FD M +N V++T +I G
Sbjct: 166 KVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISG 225
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF-QVHSHVVKLGHDS 172
+ + LF M R +P+ VT +++L C + L ++H + G +
Sbjct: 226 CVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHA 285
Query: 173 AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
+ + + YC+ V L+ L++ RD V ++++I+GYA G E + L +MR
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
G E + T A++ A ++F +H +K + ++ +GNAL+D Y+K L
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
AR++FY++ E D VS++ MI AY G E++ +F+ + ++ + F +LS
Sbjct: 406 AAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACN 465
Query: 353 NMLDLQMGRQLHSQA 367
+ ++ + + +QA
Sbjct: 466 HAGLVEEAQTIFTQA 480
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 266 bits (680), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 268/493 (54%), Gaps = 36/493 (7%)
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+IA IH ++T + FV L+ S D + A +F + + Y MI
Sbjct: 87 NIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMID 146
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIV----- 369
+ +G + ++L+ ++ N+ ++L DL++ R++H+Q +
Sbjct: 147 GFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGS 202
Query: 370 --------------------------TTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
D + + A +++ Y++C +EA +F +
Sbjct: 203 SRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVK 262
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
+ TV WTAMI V+N ++L+LF EM+ +NV+A++ T VL A ++L ++ LG+
Sbjct: 263 IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRW 322
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
+HS++ S + G+AL++MY++CG + +A ++F+ M +++V+S+N +IS A +G
Sbjct: 323 VHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGA 382
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ F +MV G++P+ V+ + + ACSH GL++ GL FNSM +V+ + P+ EHY
Sbjct: 383 SVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYG 442
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVL 643
IVD+L R G+ ++A + I +P +PD IM ++L++C+IH N +L ++ A++LF E
Sbjct: 443 CIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN- 501
Query: 644 RDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHP 703
D+ YV +SN+ A +G+W+ +++++MR+ G+ K P S +E+ +++H F D HP
Sbjct: 502 PDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHP 561
Query: 704 QMKEIILKIDILS 716
+ I ++ L+
Sbjct: 562 HKEAIYQRLQELN 574
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 195/440 (44%), Gaps = 41/440 (9%)
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM 200
T +++L C K I + +H+ +++ HD + LI + VD A ++ +
Sbjct: 77 TLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 133
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
+ Y A+I G+ + G + + + L+ M ++ +VL A D+ +
Sbjct: 134 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCR 189
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTG 320
+IH +K + VG +++ Y K LV A+K+F +MP+ D V+ +MI Y+ G
Sbjct: 190 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 249
Query: 321 LIKE-------------------------------SINLFRKLQFTKYDRRNFPFATMLS 349
IKE ++ LFR++Q F +LS
Sbjct: 250 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 309
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
+++ L++GR +HS + V NAL++MY++C EA R+F + + +
Sbjct: 310 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 369
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
+ MIS +G E++ F +M +Q T ++L A ++ + +G ++ + +
Sbjct: 370 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMK 429
Query: 470 RS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEAT 527
R I +VD+ + G L++A + + +P E + + L+SA +G+ E
Sbjct: 430 RVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELG 489
Query: 528 LKLFEEMVLLGYQPDSVSFL 547
K+ + + PDS +++
Sbjct: 490 EKIAKRL-FESENPDSGTYV 508
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 36/338 (10%)
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
A ++F + N YT +I G+ S + + L+ RM + PD ++L C+
Sbjct: 126 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD- 184
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNAL 211
+K ++H+ V+KLG S+ + +++ Y K + A +++ EMP RD V +
Sbjct: 185 ---LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 241
Query: 212 IAGYANEGFNKEAIKLFMEM----------------------------RDLGFET---SD 240
I Y+ GF KEA++LF ++ R++ E ++
Sbjct: 242 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 301
Query: 241 FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYK 300
FT VL A L + G+ +H + + + FVGNAL++ YS+ + EAR++F
Sbjct: 302 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 361
Query: 301 MPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG 360
M + D +SYN MI+ A G E+IN FR + + +L+ ++ L +G
Sbjct: 362 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 421
Query: 361 RQL-HSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
++ +S V + ++ +VD+ + R EEA R
Sbjct: 422 LEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYR 459
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 47/228 (20%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
N +I+ Y + G ++ A+ +F M +++ ++Y +I G + +EA F M G
Sbjct: 339 GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF 398
Query: 136 KPDYVTFVTLLSGCNDPKMI----------KGLFQVHSHVVKLG------------HDSA 173
+P+ VT V LL+ C+ ++ K +F V + G ++
Sbjct: 399 RPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 458
Query: 174 VIICNSLID----------SYCKMHC-VDLASQLYK---EMPQRDSVTYNALIAGYANEG 219
I N I+ S CK+H ++L ++ K E DS TY L YA+ G
Sbjct: 459 RFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSG 518
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
KE+ ++ MRD G E G I QIH + V
Sbjct: 519 KWKESTEIRESMRDSGIEKEP-----------GCSTIEVDNQIHEFLV 555
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 266 bits (679), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 277/542 (51%), Gaps = 48/542 (8%)
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLI--DSYCKMHCVDLASQLYKEMPQRDSVTYNA 210
K I+ L Q+H+ +V G S + + LI S + A +L+ E+P+ D N
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNH 82
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT 270
++ G A ++ + L+ EM G +TF VL A L+ + G HG V+
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 271 LIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFR 330
+ N +V NAL+ F++ L A +LF + V+++ M + YA G I E++ LF
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 331 KLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCR 390
++ + + + N ++ KC+
Sbjct: 203 EMPY---------------------------------------KDQVAWNVMITGCLKCK 223
Query: 391 RPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLK 450
+ A +F + + + V W AMIS V G+ +E+L +F EMR D T S+L
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 451 ASANLASISLGKQLHSYIIRSGFMSS-IYAGS----ALVDMYAKCGSLKDAIQIFKEMPE 505
A A L + GK+LH YI+ + +SS IY G+ AL+DMYAKCGS+ AI++F+ + +
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRY 565
R++ +WN LI A + E ++++FEEM L P+ V+F+ V ACSH G V+EG +Y
Sbjct: 344 RDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKY 402
Query: 566 FNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHK 625
F+ M +Y + P +HY +VD+L R+G+ ++A + M +P+ I+W ++L +C+I+
Sbjct: 403 FSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 462
Query: 626 NQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSW 685
N +L K A E+L +M ++ YV +SNI A GQW+ V KV+K + + K S
Sbjct: 463 NVELGKYANEKLLSMRK-DESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSL 521
Query: 686 VE 687
+E
Sbjct: 522 IE 523
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 115/204 (56%), Gaps = 12/204 (5%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
+ G++ EA LFD+MPY++ ++ NVMI+G LK ++ A+E+FD E++ VT+ +I G
Sbjct: 190 KRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISG 249
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
Y EA +F M +G PD VT ++LLS C ++ ++H ++++ S+
Sbjct: 250 YVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSS 309
Query: 174 VI-----ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYA---NEGFNKEAI 225
I I N+LID Y K +D A ++++ + RD T+N LI G A EG +I
Sbjct: 310 SIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG----SI 365
Query: 226 KLFMEMRDLGFETSDFTFQAVLYA 249
++F EM+ L ++ TF V+ A
Sbjct: 366 EMFEEMQRLKVWPNEVTFIGVILA 389
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 170/380 (44%), Gaps = 60/380 (15%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N N +I + G L IA E+FD + + V ++ + GY+K + EA +LF M
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM- 204
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
D V + +++GC + C + D
Sbjct: 205 ---PYKDQVAWNVMITGC-------------------------LKCKEM----------D 226
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A +L+ ++D VT+NA+I+GY N G+ KEA+ +F EMRD G T ++L A
Sbjct: 227 SARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 286
Query: 252 GLDDIAFGQQIHGYAVKTTLI-WNVFVG----NALLDFYSKHDCLVEARKLFYKMPELDG 306
L D+ G+++H Y ++T + +++VG NAL+D Y+K + A ++F + + D
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHS- 365
++N +I A + SI +F ++Q K F ++ ++ + GR+ S
Sbjct: 347 STWNTLIVGLA-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 366 QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISA----- 416
+ + + +VDM + + EEA F+ + S P W ++ A
Sbjct: 406 MRDMYNIEPNIKHYGCMVDMLGRAGQLEEA---FMFVESMKIEPNAIVWRTLLGACKIYG 462
Query: 417 NVQNGHFEESLKLFSEMRRD 436
NV+ G + KL S MR+D
Sbjct: 463 NVELGKYANE-KLLS-MRKD 480
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 136/289 (47%), Gaps = 16/289 (5%)
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRP---EEAERIFVKLSSRC 406
L N +++ +Q+H+ +V S + V L+ A P + A ++F ++
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELI-YSASLSVPGALKYAHKLFDEIPKPD 76
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
++ + Q+ E+++ L++EM + V+ D+ TF VLKA + L S G H
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
++R GF+ + Y +AL+ +A CG L A ++F + + + V+W+++ S YA G +
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
++LF+EM D V++ + T C ++ F+ T+ + + +++
Sbjct: 197 AMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-----WNAMI 247
Query: 587 DVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKR 632
G +A + EM PD + S+L++C + + + KR
Sbjct: 248 SGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 115/280 (41%), Gaps = 57/280 (20%)
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSS-------IYAGSALVDMYAKCG 491
T D+ T K N +I KQ+H+ ++ +G MS+ IY+ S V G
Sbjct: 6 TNDRTTNRRRPKLWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVP-----G 60
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
+LK A ++F E+P+ +V N ++ A + E T+ L+ EM G PD +F V
Sbjct: 61 ALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLK 120
Query: 552 ACS-----------HWGLVEEGL------------------------RYFNSMTKVYKLV 576
ACS H +V G F+ K +K+
Sbjct: 121 ACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVA 180
Query: 577 PKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQ 636
++S+ + GK D+A +L EMP+ D++ W+ ++ C K D +A +
Sbjct: 181 -----WSSMTSGYAKRGKIDEAMRLFDEMPY-KDQVAWNVMITGCLKCKEMD----SARE 230
Query: 637 LFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
LF+ +D + M + G + + K MR+ G
Sbjct: 231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 168/539 (31%), Positives = 274/539 (50%), Gaps = 15/539 (2%)
Query: 190 VDLASQLYKEMPQRD-SVTYNALIAGYANEGFNKEAIKLFMEMR-DLGFETSDFTFQAVL 247
+ A +L+ + PQRD S N++I Y ++ L+ ++R + F +FTF L
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTF-TTL 84
Query: 248 YAGIGLDDIAF-GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
L + G Q+H + +++V ++D Y+K + AR F +MP
Sbjct: 85 TKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
VS+ +I+ Y G + + LF ++ K + M+ D+ R+L +
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDE 201
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEES 426
T V+ ++ Y + + A ++F + R V W MI QN +E
Sbjct: 202 MTHKT----VITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 427 LKLFSEMR-RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVD 485
++LF EM+ ++ D T SVL A ++ ++SLG+ H ++ R + +A++D
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILD 317
Query: 486 MYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
MY+KCG ++ A +IF EMPE+ V SWNA+I YA NG+ A L LF M ++ +PD ++
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEIT 376
Query: 546 FLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
L V TAC+H GLVEEG ++F+ M ++ L K EHY +VD+L R+G +AE LI M
Sbjct: 377 MLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Query: 606 PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV 665
PF+P+ I+ SS L++C +K+ + A+R ++ +E D YV + N+ A +W+
Sbjct: 436 PFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN-YVLLRNLYAADKRWDDF 494
Query: 666 GKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGY 724
G VK MR+ K S +EI + V F + D HP + I L + L M +E Y
Sbjct: 495 GMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 226/515 (43%), Gaps = 52/515 (10%)
Query: 61 ARELFDQMPYRN-TISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQ 119
AR+LFDQ P R+ + SN MI YL+ + Q
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLE-------------------------------TRQ 57
Query: 120 FIEAFKLFVRMCRSGT--KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+ ++F L+ R R T PD TF TL C+ + Q+HS + + G + + +
Sbjct: 58 YPDSFALY-RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVS 116
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
++D Y K + A + EMP R V++ ALI+GY G A KLF +M +
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV--- 173
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAV-KTTLIWNVFVGNALLDFYSKHDCLVEARK 296
+ A++ + D+ +++ KT + W + Y + ARK
Sbjct: 174 KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHG-----YCNIKDIDAARK 228
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ-FTKYDRRNFPFATMLSLAANML 355
LF MPE + VS+N MI Y +E I LF+++Q T D + ++L ++
Sbjct: 229 LFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTG 288
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
L +G H D +V V A++DMY+KC E+A+RIF ++ + W AMI
Sbjct: 289 ALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIH 348
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
NG+ +L LF M + D+ T +V+ A + + G++ + G +
Sbjct: 349 GYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNA 407
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEM 534
I +VD+ + GSLK+A + MP E N + ++ +SA D E ++ ++
Sbjct: 408 KIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKA 467
Query: 535 VLLGYQPDSVSFLC--VFTACSHW---GLVEEGLR 564
V L Q D L ++ A W G+V+ +R
Sbjct: 468 VELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMR 502
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 135/276 (48%), Gaps = 41/276 (14%)
Query: 56 GQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVE-RNAVTYTLLIGGY 114
G++ AR FD+MP+R+ +S +ISGY++ G+L +A ++FD M ++ V Y ++ G+
Sbjct: 127 GKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGF 186
Query: 115 SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV 174
KS A +LF M T +T+ T++ G
Sbjct: 187 VKSGDMTSARRLFDEM----THKTVITWTTMIHG-------------------------- 216
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR-D 233
YC + +D A +L+ MP+R+ V++N +I GY +E I+LF EM+
Sbjct: 217 ---------YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQAT 267
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
+ D T +VL A ++ G+ H + + L V V A+LD YSK + +
Sbjct: 268 TSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEK 327
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLF 329
A+++F +MPE S+N MI YA G + +++LF
Sbjct: 328 AKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 49 IMD-LVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTY 107
+MD V++G ++ AR LFD+M ++ I+ MI GY + A+++FD+M ERN V++
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 108 TLLIGGYSKSDQFIEAFKLFVRM-CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV 166
+IGGY ++ Q E +LF M + PD VT +++L +D + H V
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ 301
Query: 167 KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIK 226
+ D V +C +++D Y K ++ A +++ EMP++ ++NA+I GYA G + A+
Sbjct: 302 RKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALD 361
Query: 227 LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYS 286
LF+ M + + + T AV+ A + G++ + L + ++D
Sbjct: 362 LFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLG 420
Query: 287 KHDCLVEARKLFYKMP-ELDGVSYNMMITA 315
+ L EA L MP E +G+ + ++A
Sbjct: 421 RAGSLKEAEDLITNMPFEPNGIILSSFLSA 450
>AT1G17630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6064525-6066720 FORWARD
Length = 731
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 285/594 (47%), Gaps = 75/594 (12%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+N+++ + G + A++L+ MR G + +L A L + H +
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA---------- 317
+ L N+ V N LL Y K + +A LF +MP + +S+N+MI ++
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 318 ----------------WT---------GLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
WT G ++ + F ++ + A S+ A
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ L + ++H I + + NAL+ +Y K + ++AE +F ++ ++ W +
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 413 MISANVQNGHFEESLKLFSEMRRDN----------------------------------- 437
+I++ V G +E+L LFSE+ N
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Query: 438 ----VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
V A+ T +L A L +++LG+++H ++IR+ +I +ALV+MYAKCG L
Sbjct: 426 QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLL 485
Query: 494 KDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+ +F+ + +++++SWN++I Y +G E L +F+ M+ G+ PD ++ + V +AC
Sbjct: 486 SEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSAC 545
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIM 613
SH GLVE+G F SM+K + L P++EHYA IVD+L R G +A +++ MP +P +
Sbjct: 546 SHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCV 605
Query: 614 WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
++LNSCR+HKN D+A+ A QL +E R + Y+ +SNI + G+WE V+ +
Sbjct: 606 LGALLNSCRMHKNVDIAEGIASQLSVLEPERTGS-YMLLSNIYSAGGRWEESANVRALAK 664
Query: 674 ERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPD 727
++ L KV SW+E+K K + F + + + I ++ L M K+G D
Sbjct: 665 KKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 228/536 (42%), Gaps = 79/536 (14%)
Query: 61 ARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM---VERNAVTYTLLIGGYSKS 117
A+ L +R+ + +IS Y + G L A+ +F+++ + + + ++
Sbjct: 77 AQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSH 136
Query: 118 DQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+ A +L+ M + G D +L C H+ V+++G + +
Sbjct: 137 GLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVV 196
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
N L+ Y K + A L+ EMP R+ +++N +I G++ E + A+K+F M+ F+
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 238 TSDFTFQAVL--YAGIG---------------------------------LDDIAFGQQI 262
+ T+ +VL ++ G L+ ++ +++
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY------ 316
HGY +K + NAL+ Y K + +A LF ++ S+N +IT++
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 317 ------------------------AWTGLIK---------ESINLFRKLQFTKYDRRNFP 343
WT +IK +S+ FR++QF+K +
Sbjct: 377 DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT 436
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
+LS+ A + L +GR++H I T+ +LV NALV+MYAKC E +F +
Sbjct: 437 ICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR 496
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
+ + W ++I +G E++L +F M D +VL A ++ + G++
Sbjct: 497 DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 464 L-HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
+ +S R G + +VD+ + G LK+A +I K MP E V AL+++
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNS 612
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 118/220 (53%), Gaps = 6/220 (2%)
Query: 355 LDLQMGRQLHSQAIVT--TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP--- 409
L Q RQ+H+Q +++ S L AN L+ +YA+ +A +F +S
Sbjct: 67 LTAQQCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRL 125
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
W +++ ANV +G +E +L+L+ MR+ +T D +L+A L L + H+ +I
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLK 529
+ G +++ + L+ +Y K G + DA +F EMP RN +SWN +I ++ D E+ +K
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVK 245
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
+FE M ++PD V++ V + S G E+ L+YF+ M
Sbjct: 246 IFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 175/375 (46%), Gaps = 43/375 (11%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSI 91
++++ G + N + + G++ +A LF +MP RN +S NVMI G+ +E
Sbjct: 183 QVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES 242
Query: 92 AKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
A +IF+ M + + VT+T ++ +S+ +F + K F M SG S
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C + + + +VH +V+K G + + N+LI Y K V A L++++ + +
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIES 362
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLG----FETSDFTFQAVLYA----GIGLDDIAF- 258
+N+LI + + G EA+ LF E+ ++ + + T+ +V+ G G D + +
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 259 ------------------------------GQQIHGYAVKTTLIWNVFVGNALLDFYSKH 288
G++IHG+ ++T++ N+ V NAL++ Y+K
Sbjct: 423 RQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKC 482
Query: 289 DCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
L E +F + + D +S+N +I Y G ++++++F ++ + + +L
Sbjct: 483 GLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVL 542
Query: 349 SLAANMLDLQMGRQL 363
S ++ ++ GR++
Sbjct: 543 SACSHAGLVEKGREI 557
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 8/229 (3%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ ++K GF+ N I + G++ +A LF Q+ + S N +I+ ++ GK
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Query: 89 LSIAKEIFDSM--------VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYV 140
L A +F + V+ N VT+T +I G + + ++ + F +M S + V
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSV 435
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM 200
T +LS C + + ++H HV++ +++ N+L++ Y K + S +++ +
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
+D +++N++I GY GF ++A+ +F M GF AVL A
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 293/564 (51%), Gaps = 35/564 (6%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L +A+++F+ M ++ T+ ++ E F + R G +F+ +L G
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
+ K + Q+H K G D + + NSLI +Y K +A +++++ D V++
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
NA+I A +A+KLF+ M + GF + T+ +VL + ++ G+QIHG +K
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYA-WTGLIKESIN 327
+ +GNAL+DFY+K L ++R F + + + V +N +++ YA G I ++
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLS 402
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQ--------MG-----------------RQ 362
LF ++ + + F+T L + + +LQ MG Q
Sbjct: 403 LFLQMLQMGFRPTEYTFSTALK-SCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQ 461
Query: 363 LHSQAIV----TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANV 418
L + A++ + + V+ N + +Y++ + E+ ++ L TV W I+A
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 521
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF-MSSI 477
++ + EE ++LF M + N+ D+ TF S+L + L ++LG +H I ++ F +
Sbjct: 522 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT 581
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLL 537
+ + L+DMY KCGS++ +++F+E E+N+++W ALIS +G G+ L+ F+E + L
Sbjct: 582 FVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSL 641
Query: 538 GYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDK 597
G++PD VSF+ + TAC H G+V+EG+ F M K Y + P+ +HY VD+L R+G +
Sbjct: 642 GFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKE 700
Query: 598 AEKLIAEMPFDPDEIMWSSILNSC 621
AE LI EMPF D +W + L+ C
Sbjct: 701 AEHLIREMPFPADAPVWRTFLDGC 724
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 242/476 (50%), Gaps = 32/476 (6%)
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
V +CN++I Y K+ V LA +++ +MP+R+ V++N +I GY+ G +A +F EMR
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLV 292
G+ + T +L D+ G Q+HG ++K L + + FVG LL Y + D L
Sbjct: 109 FGYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
A ++F MP ++N M++ G +KE + FR+L F +L +
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ DL + +QLH A D E+ V N+L+ Y KC AER+F S V W A
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
+I A ++ + ++LKLF M + +Q T+ SVL S+ + +S G+Q+H +I++G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFE 532
+ I G+AL+D YAKCG+L+D+ F + ++N+V WNAL+S YA N DG L LF
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 405
Query: 533 EMVLLGYQPDSVSFLCVFTACS-------HWGLVEEGLR----YFNSMTKVYK------- 574
+M+ +G++P +F +C H +V G +S+ + Y
Sbjct: 406 QMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMND 465
Query: 575 ---LVPKREHYASIV------DVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
L+ S+V + R G++ ++ KLI+ + PD + W+ + +C
Sbjct: 466 ALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/643 (23%), Positives = 296/643 (46%), Gaps = 59/643 (9%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +IS Y K G++S+A ++FD M ERN V++ +I GYSK +A+ +F M G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG---HDSAVIICNSLIDSYCKMHCVDLA 193
P+ T LLS C + G Q+H +K G D+ V C L+ Y ++ +++A
Sbjct: 113 PNQSTVSGLLS-CASLDVRAGT-QLHGLSLKYGLFMADAFVGTC--LLCLYGRLDLLEMA 168
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
Q++++MP + T+N +++ + GF KE + F E+ +G ++ +F VL +
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Query: 254 DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMI 313
D+ +Q+H A K L + V N+L+ Y K A ++F D VS+N +I
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
A A + +++ LF + + + ++L +++ + L GRQ+H I +
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
+ +++ NAL+D YAKC E++ F + + V W A++S N L LF +M
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG-YANKDGPICLSLFLQM 407
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
+ + TF++ LK+ ++ +QLHS I+R G+ + Y S+L+ YAK +
Sbjct: 408 LQMGFRPTEYTFSTALKS----CCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 494 KDA--------------------------------IQIFKEMPERNVVSWNALISAYASN 521
DA +++ + + + VSWN I+A + +
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRS 523
Query: 522 GDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH 581
E ++LF+ M+ +PD +F+ + + CS + G + ++ L+ K +
Sbjct: 524 DYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLG-------SSIHGLITKTDF 576
Query: 582 YAS-------IVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAA 634
+ ++D+ + G K+ E + + I W+++++ IH A
Sbjct: 577 SCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEALEKF 635
Query: 635 EQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
++ ++ D ++++ G + + + M++ G+
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGV 678
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 39/396 (9%)
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
+ L+ V+V N ++ Y K + A K+F +MPE + VS+N +I Y+ G + ++ +
Sbjct: 43 SVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGV 102
Query: 329 FRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI---VTTADSEVLVANALVDM 385
F ++++ Y + +LS A+ LD++ G QLH ++ + AD+ V L+ +
Sbjct: 103 FSEMRYFGYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADA--FVGTCLLCL 158
Query: 386 YAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATF 445
Y + E AE++F + + W M+S G +E + F E+ R + +++F
Sbjct: 159 YGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSF 218
Query: 446 ASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
VLK + + + + KQLH + G I ++L+ Y KCG+ A ++F++
Sbjct: 219 LGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGS 278
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS----------- 554
++VSWNA+I A A + + LKLF M G+ P+ +++ V S
Sbjct: 279 WDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
Query: 555 HWGLV----EEGLRYFNSMTKVYKLVPKREH------YASIVDVLC----RSGKFDKAEK 600
H L+ E G+ N++ Y E Y +++C SG +K
Sbjct: 339 HGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP 398
Query: 601 L-------IAEMPFDPDEIMWSSILNSCRIHKNQDL 629
+ + +M F P E +S+ L SC + + Q L
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL 434
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 178/420 (42%), Gaps = 47/420 (11%)
Query: 37 GFDPS--TSRSNYQIMDLVQTGQLSEARELFDQMPYRNT----ISSNVMISGYLKEGKLS 90
GF P+ T S + LVQ LS R++ + + N +I Y K G L
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQL--LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
++ FD + ++N V + L+ GY+ D I LF++M + G +P TF T L C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFSTALKSC- 426
Query: 151 DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK-------MHCVDLAS--------- 194
+ L Q+HS +V++G++ + +SL+ SY K + +D AS
Sbjct: 427 ---CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLN 483
Query: 195 ----------------QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFET 238
+L + Q D+V++N IA + +++E I+LF M
Sbjct: 484 IVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRP 543
Query: 239 SDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEARKL 297
+TF ++L L D+ G IHG KT + FV N L+D Y K + K+
Sbjct: 544 DKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKV 603
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
F + E + +++ +I+ G +E++ F++ + F ++L+ + +
Sbjct: 604 FEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMV 663
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMISA 416
+ G L + + E+ VD+ A+ +EAE + ++ P W +
Sbjct: 664 KEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 447 SVLKASANLASISLGKQLHSYIIR--SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
S+L S + K LH+ I S + +Y + ++ +Y K G + A ++F +MP
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 505 ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLR 564
ERN VS+N +I Y+ GD + +F EM GY P+ S + +C+ V G +
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQ-STVSGLLSCASLD-VRAGTQ 134
Query: 565 YFNSMTKVYKLVPKREHYASIVDVLCRSGKFD---KAEKLIAEMPFDPDEIMWSSILN 619
+ ++ Y L + +LC G+ D AE++ +MPF E W+ +++
Sbjct: 135 -LHGLSLKYGLFMADAFVGTC--LLCLYGRLDLLEMAEQVFEDMPFKSLET-WNHMMS 188
>AT1G05750.1 | Symbols: PDE247, CLB19 | PDE247 (pigment defective
247) | chr1:1721523-1723025 FORWARD
Length = 500
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 211/357 (59%), Gaps = 2/357 (0%)
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
D + N ++D Y + + + A ++F K+ R + WTAMI+ V+ G+ EE+L F E
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
M+ V D + L A NL ++S G +H Y++ F +++ ++L+D+Y +CG
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
++ A Q+F M +R VVSWN++I +A+NG+ +L F +M G++PD+V+F TA
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA 316
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEI 612
CSH GLVEEGLRYF M Y++ P+ EHY +VD+ R+G+ + A KL+ MP P+E+
Sbjct: 317 CSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEV 376
Query: 613 MWSSILNSCRIHKNQ-DLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKA 671
+ S+L +C H N LA+R + L ++ V + + YV +SN+ A G+WE K+++
Sbjct: 377 VIGSLLAACSNHGNNIVLAERLMKHLTDLNV-KSHSNYVILSNMYAADGKWEGASKMRRK 435
Query: 672 MRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDT 728
M+ GL K P +S +EI +H+F A D H + I ++++S + +G V +T
Sbjct: 436 MKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 135/253 (53%), Gaps = 7/253 (2%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG 113
+ G+ +AR +FD M +N+++ N MI GY++ G++ A ++FD M ER+ +++T +I G
Sbjct: 121 KRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMING 180
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
+ K EA F M SG KPDYV + L+ C + + VH +V+ +
Sbjct: 181 FVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNN 240
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
V + NSLID YC+ CV+ A Q++ M +R V++N++I G+A G E++ F +M++
Sbjct: 241 VRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
Query: 234 LGFETSDFTFQAVLYA----GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
GF+ TF L A G+ + + + Q + + I + L+D YS+
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY---GCLVDLYSRAG 357
Query: 290 CLVEARKLFYKMP 302
L +A KL MP
Sbjct: 358 RLEDALKLVQSMP 370
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 159/331 (48%), Gaps = 39/331 (11%)
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND----PKMIKGLFQ 160
V++T I +++ + EA K F M +G +P+++TF+ LLSGC D + + L
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL-- 94
Query: 161 VHSHVVKLGHD-------SAVI-------------------------ICNSLIDSYCKMH 188
+H + KLG D +A+I N++ID Y +
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 189 CVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
VD A++++ +MP+RD +++ A+I G+ +G+ +EA+ F EM+ G + A L
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
A L ++FG +H Y + NV V N+L+D Y + C+ AR++FY M + VS
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG-RQLHSQA 367
+N +I +A G ES+ FRK+Q + F L+ +++ ++ G R
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ LVD+Y++ R E+A ++
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 167/367 (45%), Gaps = 40/367 (10%)
Query: 195 QLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG-- 252
Q + + +V++ + I G EA K F +M G E + TF A+L +G G
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALL-SGCGDF 84
Query: 253 -LDDIAFGQQIHGYAVKTTLIWN-VFVGNALLDFYSKHDCLVEAR--------------- 295
A G +HGYA K L N V VG A++ YSK +AR
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 296 ----------------KLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDR 339
K+F KMPE D +S+ MI + G +E++ FR++Q +
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 340 RNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF 399
L+ N+ L G +H + + V V+N+L+D+Y +C E A ++F
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 400 VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
+ R V W ++I NG+ ESL F +M+ D TF L A +++ +
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 460 LGKQLHSYIIRSGFMSS--IYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALIS 516
G + + I++ + S I LVD+Y++ G L+DA+++ + MP + N V +L++
Sbjct: 325 EGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 517 AYASNGD 523
A +++G+
Sbjct: 384 ACSNHGN 390
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 403 SSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS--L 460
+S TV WT+ I+ +NG E+ K FS+M V + TF ++L + S S L
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 461 GKQLHSYIIRSGF-MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYA 519
G LH Y + G + + G+A++ MY+K G K A +F M ++N V+WN +I Y
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 520 SNGDGEATLKLFE-------------------------------EMVLLGYQPDSVSFLC 548
+G + K+F+ EM + G +PD V+ +
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 549 VFTACSHWGLVEEGL---RYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
AC++ G + GL RY +++ +K + + S++D+ CR G + A ++ M
Sbjct: 212 ALNACTNLGALSFGLWVHRYV--LSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFYNM 267
Query: 606 PFDPDEIMWSSIL 618
+ W+S++
Sbjct: 268 E-KRTVVSWNSVI 279
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 192/729 (26%), Positives = 348/729 (47%), Gaps = 83/729 (11%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIA 92
GF+P + + + L + G+ +A + D + + ++S I G +K +
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 93 KEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
E+F + + + Y +LI K+ + +EA LF M G KP T+ +++ G
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 149 -CNDPKMIKGLFQVHSHVVKLGHDSA---VIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
C + ++ +GL S +V++ D VI SLI C A + EM +D
Sbjct: 659 WCKEGEIDRGL----SCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 205 S----VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV---------LYAGI 251
+T+ ALI G G++ EA+ F EM + E + ++ + AG
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
G+ F + +H ++ N + ++ S D A K K+ + +N
Sbjct: 775 GI----FREMVHKGRFPVSVDRNYMLA---VNVTSDVD---YAYKFLSKLSDPPNYGWNF 824
Query: 312 MITAYAWTGLIKESINLFRKLQFTKY----DRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
+I ++ + ++SI+++ +Q ++ D +PF ++ ++ + + ++G LH
Sbjct: 825 VIRGFSNSRNPEKSISVY--IQMLRFGLLPDHMTYPF--LMKSSSRLSNRKLGGSLHCSV 880
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAER------------------------------ 397
+ + + ++ + N L+ MY R A +
Sbjct: 881 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 940
Query: 398 -IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR-DNVTADQATFASVLKASANL 455
+F ++S R V W++MI V+ G + ++L++F +M R + A++ T SV+ A A+L
Sbjct: 941 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 1000
Query: 456 ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF--KEMPERNVVSWNA 513
+++ GK +H YI+ ++ ++L+DMYAKCGS+ DA +F + E + + WNA
Sbjct: 1001 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 1060
Query: 514 LISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVY 573
+I AS+G +L+LF +M PD ++FLC+ ACSH GLV+E +F S+ K
Sbjct: 1061 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KES 1119
Query: 574 KLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRA 633
PK EHYA +VDVL R+G A I+EMP P M ++LN C H N +LA+
Sbjct: 1120 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 1179
Query: 634 AEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVH 693
++L ++ D YV ++N+ A Q+ + +++AM ++G+ K+ +S +++ H
Sbjct: 1180 GKKLIELQPHNDGR-YVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 1238
Query: 694 IFCANDKNH 702
F A+DK H
Sbjct: 1239 RFIAHDKTH 1247
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 123/220 (55%), Gaps = 3/220 (1%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
+VK+G + N I + AR+LFD+MP++N ++ N ++ Y K G + A
Sbjct: 880 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 939
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT-KPDYVTFVTLLSGCND 151
+ +FD M ER+ VT++ +I GY K ++ +A ++F +M R G+ K + VT V+++ C
Sbjct: 940 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 999
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV-DLASQLYK-EMPQRDSVTYN 209
+ VH +++ + VI+ SLID Y K + D S Y+ + + D++ +N
Sbjct: 1000 LGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWN 1059
Query: 210 ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
A+I G A+ GF +E+++LF +MR+ + + TF +L A
Sbjct: 1060 AIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 1099
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 153/770 (19%), Positives = 290/770 (37%), Gaps = 150/770 (19%)
Query: 45 SNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSM- 99
S ++ + GQ+ +A EL + + R N + V+I G++KE ++ A ++F+ M
Sbjct: 251 STILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMR 310
Query: 100 ---VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS--------- 147
+ + Y +LIGG K A L++ + RSG PD LL
Sbjct: 311 RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELS 370
Query: 148 -------GCNDPKMI----KGLFQ-------VH------------------SHVVKL--- 168
G D K + K LF+ VH S +VKL
Sbjct: 371 RITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD 430
Query: 169 -------GHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT----YNALIAGYAN 217
DS I+ N L+ K + VD+A L ++ Q + YN +I G
Sbjct: 431 HNKAILPDSDSLSIVINCLV----KANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCK 486
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA------GIGLDDIAFGQQIHGYA--VKT 269
EG ++E++KL EM+D G E S FT + +G D+ + +G+ +K
Sbjct: 487 EGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKH 546
Query: 270 T---------------------------LIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
T + ++ A +D K++ + +LF +
Sbjct: 547 TTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDIC 606
Query: 303 E----LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
D ++Y+++I A E+ LF ++ + +M+ ++
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 359 MGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMI 414
G + + +V+ +L+ RP EA + ++ + P + A+I
Sbjct: 667 RGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALI 726
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG-F 473
+ G E+L F EM + D A + S++ + + +I+ G + ++ G F
Sbjct: 727 QGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRF 786
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEE 533
S+ L + A + ++ + WN +I ++++ + E ++ ++ +
Sbjct: 787 PVSVDRNYMLA--VNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ 844
Query: 534 MVLLGYQPDSVSFLCVFTACS-----------HWGLVEEGLRY--------------FNS 568
M+ G PD +++ + + S H +V+ GL + F
Sbjct: 845 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 904
Query: 569 MTKVYKLVPKREH-----YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRI 623
KL + H + SI+D +SG A + EM + D + WSS+++
Sbjct: 905 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS-ERDVVTWSSMIDGYVK 963
Query: 624 HKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
+ A +Q+ M A VTM +++ ++ + K R
Sbjct: 964 RGEYNKALEIFDQMMRMG--SSKANEVTMVSVICACAHLGALNRGKTVHR 1011
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 188/644 (29%), Positives = 298/644 (46%), Gaps = 102/644 (15%)
Query: 142 FVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE-- 199
V+ L C + Q+H V+K G DS ICNS+++ Y K + A ++++
Sbjct: 298 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 357
Query: 200 -----------------------------MPQRDSVTYNALIAGYANEGFNKEAIKLFME 230
MP+R V+Y LI GYA EA++LF E
Sbjct: 358 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 417
Query: 231 MRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDC 290
MR+LG ++ T V+ A L I + + A+K L VFV LL Y C
Sbjct: 418 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 477
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYD------------ 338
L +ARKLF +MPE + V++N+M+ Y+ GLI+++ LF Q T+ D
Sbjct: 478 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFD--QITEKDIVSWGTMIDGCL 535
Query: 339 RRN---------------------FPFATMLSLAANMLDLQMGRQLHS------------ 365
R+N +LS +A + G QLH
Sbjct: 536 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 595
Query: 366 -------------------QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
Q + + NAL+ + K E+A +F + +
Sbjct: 596 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 655
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQLH 465
W AMIS Q+ + +L LF EM V D T SV A ++L S+ GK+ H
Sbjct: 656 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 715
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIF---KEMPERNVVSWNALISAYASNG 522
Y+ S + +A++DMYAKCGS++ A+ IF K + + WNA+I A++G
Sbjct: 716 DYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHG 775
Query: 523 DGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHY 582
+ L L+ ++ L +P+S++F+ V +AC H GLVE G YF SM + + P +HY
Sbjct: 776 HAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHY 835
Query: 583 ASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV 642
+VD+L ++G+ ++A+++I +MP D ++W +L++ R H N ++A+ AA +L ++
Sbjct: 836 GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDP 895
Query: 643 LRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWV 686
V +SN+ A+AG+WE V V++ MR R + A+S V
Sbjct: 896 SHGGCK-VMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 938
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/584 (26%), Positives = 270/584 (46%), Gaps = 75/584 (12%)
Query: 13 LSSLAAKNSYPNVKTC---IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMP 69
L S A+ N TC I R++K+G D + N + + L++A +F
Sbjct: 302 LGSCASSNDV----TCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 357
Query: 70 YRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVR 129
++ S N+M+ GY++ +L A ++FD M ER+ V+YT LI GY++++Q+ EA +LF
Sbjct: 358 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 417
Query: 130 MCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHC 189
M G + VT T++S C+ I + S +KL + V + +L+ YC C
Sbjct: 418 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 477
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF--------------------- 228
+ A +L+ EMP+R+ VT+N ++ GY+ G ++A +LF
Sbjct: 478 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 537
Query: 229 ----------MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVG 278
EM G + S+ +L A + G Q+HG VK F+
Sbjct: 538 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 597
Query: 279 NALLDFYS-------------------------------KHDCLVEARKLFYKMPELDGV 307
++ FY+ K+ + +AR++F + + D
Sbjct: 598 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 657
Query: 308 SYNMMITAYAWTGLIKESINLFRKL-QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
S+N MI+ YA + + +++LFR++ ++ ++ S +++ L+ G++ H
Sbjct: 658 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 717
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK---LSSRCTVPWTAMISANVQNGHF 423
+T + A++DMYAKC E A IF + +SS PW A+I + +GH
Sbjct: 718 LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHA 777
Query: 424 EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ-LHSYIIRSGFMSSIYAGSA 482
+ +L L+S+++ + + TF VL A + + LGK S G I
Sbjct: 778 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGC 837
Query: 483 LVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGE 525
+VD+ K G L++A ++ K+MP + +V+ W L+SA ++G+ E
Sbjct: 838 MVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 881
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
+ S L + A+ ++ G+Q+H +++SG S+ Y +++++MYAKC L DA +F+
Sbjct: 295 ERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFR 354
Query: 502 E-------------------------------MPERNVVSWNALISAYASNGDGEATLKL 530
+ MPER+ VS+ LI YA N ++L
Sbjct: 355 DHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMEL 414
Query: 531 FEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLC 590
F EM LG + V+ V +ACSH G + + R S+ KL + +++ + C
Sbjct: 415 FREMRNLGIMLNEVTLATVISACSHLGGIWD-CRMLQSLAIKLKLEGRVFVSTNLLHMYC 473
Query: 591 RSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYV 650
A KL EMP + + + W+ +LN + L ++ AE+LF+ +D +
Sbjct: 474 LCLCLKDARKLFDEMP-ERNLVTWNVMLNG---YSKAGLIEQ-AEELFDQITEKDIVSWG 528
Query: 651 TM 652
TM
Sbjct: 529 TM 530
>AT5G66500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26548076-26549674 REVERSE
Length = 532
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 273/499 (54%), Gaps = 13/499 (2%)
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
A L+ E+PQRD + N+ ++ + G + + LF+++ + S TF VL A
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
L G+Q+H +K AL+D YSK+ LV++ ++F + E D VS+N +
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
++ + G KE++ +F + + + F ++++ A++ LQ G+Q+H+ +VT
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC-TVPWTAMISANVQNGHFEESLKLFS 431
D VL A++ Y+ EA +++ L+ V ++IS ++N +++E+ L S
Sbjct: 217 DLVVL-GTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+R NV +S L ++ + + +GKQ+H +R+GF+S + L+DMY KCG
Sbjct: 276 R-QRPNVR----VLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVL--LGYQPDSVSFLCV 549
+ A IF+ +P ++VVSW ++I AYA NGDG L++F EM G P+SV+FL V
Sbjct: 331 QIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVV 390
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDP 609
+AC+H GLV+EG F M + Y+LVP EHY +D+L ++G+ ++ +L+ M +
Sbjct: 391 ISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEND 450
Query: 610 DE----IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV 665
++ +W ++L++C ++ + + A +L +A+ YV +SN A G+W+ V
Sbjct: 451 NQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVV 510
Query: 666 GKVKKAMRERGLTKVPAYS 684
+++ ++ +GL K +S
Sbjct: 511 EELRGKLKNKGLVKTAGHS 529
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 234/493 (47%), Gaps = 40/493 (8%)
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
A +FD + +R+ + + + +S + LF+++ R+ TF +L C+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM-HCVDLASQLYKEMPQRDSVTYNA 210
+ QVH+ ++K G ++ I +LID Y K H VD + ++++ + ++D V++NA
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVD-SVRVFESVEEKDLVSWNA 155
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT 270
L++G+ G KEA+ +F M E S+FT +V+ L + G+Q+H V T
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 271 LIWNVFVGNALLDFYSKHDCLVEARKLFYKMP-ELDGVSYNMMITAYAWTGLIKESINLF 329
V +G A++ FYS + EA K++ + D V N +I+ KE+ L
Sbjct: 216 RDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM 274
Query: 330 RKLQFTKYDRRNFP-FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK 388
+ R N ++ L+ ++ DL +G+Q+H A+ S+ + N L+DMY K
Sbjct: 275 SR------QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 389 CRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD--NVTADQATFA 446
C + +A IF + S+ V WT+MI A NG ++L++F EM + V + TF
Sbjct: 329 CGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 447 SVLKASANLASISLGKQLHSYIIRSGFMSSIY---AGS----ALVDMYAKCGSLKDAIQI 499
V+ A A+ + GK+ G M Y G+ +D+ +K G ++ ++
Sbjct: 389 VVISACAHAGLVKEGKECF------GMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 500 FKEMPERNVVS-----WNALISAYASNGD---GE-ATLKLFEEMVLLGYQPDSVSFLC-- 548
+ M E + S W A++SA + N D GE +L EE G + S+ L
Sbjct: 443 VERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEET---GPENASIYVLVSN 499
Query: 549 VFTACSHWGLVEE 561
+ A W +VEE
Sbjct: 500 FYAAMGKWDVVEE 512
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 7/270 (2%)
Query: 64 LFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEA 123
+ Q TIS +I Y K G L + +F+S+ E++ V++ L+ G+ ++ + EA
Sbjct: 110 MIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEA 169
Query: 124 FKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
+F M R + T +++ C K+++ QVH+ VV G D V++ ++I
Sbjct: 170 LGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD-LVVLGTAMISF 228
Query: 184 YCKMHCVDLASQLYKEMP-QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
Y + ++ A ++Y + D V N+LI+G KEA L R +
Sbjct: 229 YSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRV 283
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ L D+ G+QIH A++ + + + N L+D Y K +V+AR +F +P
Sbjct: 284 LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKL 332
VS+ MI AYA G +++ +FR++
Sbjct: 344 SKSVVSWTSMIDAYAVNGDGVKALEIFREM 373
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 248/467 (53%), Gaps = 37/467 (7%)
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
LV ARKLF YN +I AY ESI L+ L F + F + +
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP- 409
+A+ + R LHSQ + +S+ L+ YAK A R+F ++S R VP
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKR-DVPV 150
Query: 410 -------------------------------WTAMISANVQNGHFEESLKLFSEMRRD-N 437
WT +IS QNG++ E+LK+F M +D +
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
V + T SVL A ANL + +G++L Y +GF +IY +A ++MY+KCG + A
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 498 QIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
++F+E+ +RN+ SWN++I + A++G + L LF +M+ G +PD+V+F+ + AC H
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
G+V +G F SM +V+K+ PK EHY ++D+L R GK +A LI MP PD ++W +
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+L +C H N ++A+ A+E LF +E + V MSNI A +W+ V +++K M++
Sbjct: 391 LLGACSFHGNVEIAEIASEALFKLEP-TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKET 449
Query: 677 LTKVPAYSW-VEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKE 722
+TK YS+ VE+ VH F DK+HP+ EI ++ + +M+ E
Sbjct: 450 MTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLE 496
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 152/296 (51%), Gaps = 4/296 (1%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ ++ ++GF+ + I + G L AR +FD+M R+ N MI+GY + G
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT-KPDYVTFVTLLS 147
+ A E+FDSM +N ++T +I G+S++ + EA K+F+ M + + KP+++T V++L
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP-QRDSV 206
C + ++ ++ + + G + +CN+ I+ Y K +D+A +L++E+ QR+
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLC 283
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
++N++I A G + EA+ LF +M G + TF +L A + + GQ++
Sbjct: 284 SWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 343
Query: 267 VKTTLIWNVFVG-NALLDFYSKHDCLVEARKLFYKMP-ELDGVSYNMMITAYAWTG 320
+ I ++D + L EA L MP + D V + ++ A ++ G
Sbjct: 344 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 175/406 (43%), Gaps = 39/406 (9%)
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAG 214
+ G+ Q+H+H ++ G D L+ + + A +L+ + YN LI
Sbjct: 1 MNGIKQLHAHCLRTGVDET----KDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQA 56
Query: 215 YANEGFNKEAIKLFMEMRDLGFETSDFTFQAV--------------------LYAGIGLD 254
Y E+I L+ + G S TF + +G D
Sbjct: 57 YYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESD 116
Query: 255 DIAFGQQIHGYAVKTTLIW-----------NVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
I YA L +V V NA++ Y + + A +LF MP
Sbjct: 117 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQ 362
+ S+ +I+ ++ G E++ +F ++ K + N ++L AN+ +L++GR+
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS-RCTVPWTAMISANVQNG 421
L A + V NA ++MY+KC + A+R+F +L + R W +MI + +G
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 422 HFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS-SIYAG 480
+E+L LF++M R+ D TF +L A + + G++L + +S +
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGE 525
++D+ + G L++A + K MP + + V W L+ A + +G+ E
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVE 402
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 33/277 (11%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L A+++FD Y LI Y Q E+ L+ + G +P + TF + +
Sbjct: 32 LVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAA 91
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
+ L +HS + G +S C +LI +Y K+ + A +++ EM +RD +
Sbjct: 92 SASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVW 151
Query: 209 NALIAGYANEGFNKEAIKLFMEM--------------------------------RDLGF 236
NA+I GY G K A++LF M +D
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
+ + T +VL A L ++ G+++ GYA + N++V NA ++ YSK + A++
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 297 LFYKMP-ELDGVSYNMMITAYAWTGLIKESINLFRKL 332
LF ++ + + S+N MI + A G E++ LF ++
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQM 308
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 147/353 (41%), Gaps = 51/353 (14%)
Query: 361 RQLHSQAIVTTADSE-------VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM 413
+QLH+ + T D +L+ N + A ++F + CT + +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLIPNLVY-----------ARKLFDHHQNSCTFLYNKL 53
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
I A + ES+ L++ + D + TF + ASA+ +S + LHS RSGF
Sbjct: 54 IQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEE 533
S + + L+ YAK G+L A ++F EM +R+V WNA+I+ Y GD +A ++LF+
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 534 M----------VLLGY----------------------QPDSVSFLCVFTACSHWGLVEE 561
M V+ G+ +P+ ++ + V AC++ G +E
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 562 GLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
G R + + +++ + G D A++L E+ + W+S++ S
Sbjct: 234 G-RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 622 RIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
H D A Q+ DA +V + G ++ K+M E
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEE 345
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 277/534 (51%), Gaps = 46/534 (8%)
Query: 161 VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGF 220
+H+H+V G I L+ Y + V A +++ EMP+RD +I A G+
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 221 NKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
+E++ F EM G + F ++L A L D FG+ IH +K + + F+ ++
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSS 157
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
L+D YSK + ARK+F + E D V +N MI+ YA E++NL + ++
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK------- 210
Query: 341 NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
+L ++ +V+ NAL+ ++ R E+ I
Sbjct: 211 -------------LLGIK---------------PDVITWNALISGFSHMRNEEKVSEI-- 240
Query: 401 KLSSRC-------TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASA 453
L C V WT++IS V N E++ F +M + + AT ++L A
Sbjct: 241 -LELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 454 NLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNA 513
LA + GK++H Y + +G + SAL+DMY KCG + +A+ +F++ P++ V++N+
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 514 LISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVY 573
+I YA++G + ++LF++M G + D ++F + TACSH GL + G F M Y
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 574 KLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRA 633
++VP+ EHYA +VD+L R+GK +A ++I M +PD +W ++L +CR H N +LA+ A
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIA 479
Query: 634 AEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVE 687
A+ L +E ++ + ++++ A AG WESV ++KK ++++ + SWVE
Sbjct: 480 AKHLAELEP-ENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 146/293 (49%), Gaps = 33/293 (11%)
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQ 419
GR LH+ + + +A LV Y +C + +A ++F ++ R MI A +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
NG+++ESL F EM +D + D S+LKAS NL GK +H +++ + S +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
S+L+DMY+K G + +A ++F ++ E+++V +NA+IS YA+N + L L ++M LLG
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
+PD +++ + + SH + E + I++++C G
Sbjct: 215 KPDVITWNALISGFSH--------------------MRNEEKVSEILELMCLDG------ 248
Query: 600 KLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM 652
+ PD + W+SI++ + + A A +Q+ + ++A +T+
Sbjct: 249 -------YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITL 294
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 209/449 (46%), Gaps = 33/449 (7%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
+++ Y++ GK+ A+++FD M +R+ ++IG +++ + E+ F M + G K D
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
+LL + + +H V+K ++S I +SLID Y K V A +++
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
++ ++D V +NA+I+GYAN EA+ L +M+ LG + T+ A++ F
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS--------GF 228
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
+ V L LD Y D VS+ +I+
Sbjct: 229 SHMRNEEKVSEILEL------MCLDGYKP-----------------DVVSWTSIISGLVH 265
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
+++ + F+++ + T+L + ++ G+++H ++VT + V
Sbjct: 266 NFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFV 325
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
+AL+DMY KC EA +F K + TV + +MI +G +++++LF +M
Sbjct: 326 RSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE 385
Query: 439 TADQATFASVLKASANLASISLGKQLHSYII-RSGFMSSIYAGSALVDMYAKCGSLKDAI 497
D TF ++L A ++ LG+ L + + + + + +VD+ + G L +A
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Query: 498 QIFKEMP-ERNVVSWNALISAYASNGDGE 525
++ K M E ++ W AL++A ++G+ E
Sbjct: 446 EMIKAMRMEPDLFVWGALLAACRNHGNME 474
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 174/398 (43%), Gaps = 36/398 (9%)
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G+ +H + V + + + L+ FY + +++ARK+F +MP+ D +MI A A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
G +ES++ FR++ F ++L + N+LD + G+ +H + + +S+ +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
++L+DMY+K A ++F L + V + AMIS N +E+L L +M+ +
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
D T+ +++ +++ + ++ + G+
Sbjct: 215 KPDVITWNALISGFSHMRNEEKVSEILELMCLDGY------------------------- 249
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
+ +VVSW ++IS N E F++M+ G P+S + + + AC+
Sbjct: 250 ------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
++ G + + + V L ++++D+ + G +A L + P S I
Sbjct: 304 MKHG-KEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIF 362
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNIL 656
+ N LA +A E ME + ++T + IL
Sbjct: 363 ----CYANHGLADKAVELFDQMEATGEKLDHLTFTAIL 396
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 43/248 (17%)
Query: 56 GQLSEARELFDQMPYRNTISSNVMISGYLKEGK----LSIAKEIFDSMVERNAVTYTLLI 111
G++ AR++F + ++ + N MISGY + L++ K++ ++ + +T+ LI
Sbjct: 166 GEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALI 225
Query: 112 GGYS------KSDQFIE-----------------------------AFKLFVRMCRSGTK 136
G+S K + +E AF F +M G
Sbjct: 226 SGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLY 285
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
P+ T +TLL C +K ++H + V G + + ++L+D Y K + A L
Sbjct: 286 PNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMIL 345
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA--GIGLD 254
+++ P++ +VT+N++I YAN G +A++LF +M G + TF A+L A GL
Sbjct: 346 FRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLT 405
Query: 255 DIAFGQQI 262
D+ GQ +
Sbjct: 406 DL--GQNL 411
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 129/276 (46%), Gaps = 21/276 (7%)
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
++ +++A+ G+ LH++++ SG + LV Y +CG + DA ++F E
Sbjct: 17 GSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDE 76
Query: 503 MPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG 562
MP+R++ +I A A NG + +L F EM G + D+ + A + L++
Sbjct: 77 MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRN--LLD-- 132
Query: 563 LRYFNSMTKVYKLVPKREH------YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
R F M ++ LV K + +S++D+ + G+ A K+ +++ + D +++++
Sbjct: 133 -REFGKM--IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNA 188
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+++ + N A A + +M++L +T + +++ + KV + +
Sbjct: 189 MISG---YANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 677 LT--KVPAYSWVE-IKHKVHIFCANDKNHPQMKEII 709
L K SW I VH F N+K K+++
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNF-QNEKAFDAFKQML 280
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 261/499 (52%), Gaps = 50/499 (10%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
+Q H Y + T L + ++ S L A +F P + +N MI A +
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALS-- 89
Query: 320 GLIKE------SINLFRKLQF--TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
L+ E +I ++RKL K D FPF +L +A + D+ GRQ+H Q +V
Sbjct: 90 -LLDEPNAHSIAITVYRKLWALCAKPDTFTFPF--VLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKL----------------------------- 402
DS V V L+ MY C +A ++F ++
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 403 ----SSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASI 458
R V WT +IS ++G E++++F M +NV D+ T +VL A A+L S+
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 459 SLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAY 518
LG+++ SY+ G ++ +A++DMYAK G++ A+ +F+ + ERNVV+W +I+
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 519 ASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPK 578
A++G G L +F MV G +P+ V+F+ + +ACSH G V+ G R FNSM Y + P
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 579 REHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLF 638
EHY ++D+L R+GK +A+++I MPF + +W S+L + +H + +L +RA +L
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELI 446
Query: 639 NMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCAN 698
+E ++ Y+ ++N+ + G+W+ ++ M+ G+ K+ S +E++++V+ F +
Sbjct: 447 KLEP-NNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Query: 699 DKNHPQMK---EIILKIDI 714
D HPQ++ EI+ ++D+
Sbjct: 506 DLTHPQVERIHEILQEMDL 524
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 197/427 (46%), Gaps = 40/427 (9%)
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAG 214
+K L Q H +++ G + + I++ + A ++ P ++ +N +I
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 215 YA---NEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV---- 267
+ + AI ++ ++ L + FTF VL + + D+ FG+QIHG V
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 268 ---------------------------KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYK 300
L+ +V V NALL Y K + EAR L
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 301 MP--ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
MP + VS+ +I+ YA +G E+I +F+++ + +LS A++ L+
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 359 MGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANV 418
+G ++ S + V + NA++DMYAK +A +F ++ R V WT +I+
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLA 327
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL-HSYIIRSGFMSSI 477
+GH E+L +F+ M + V + TF ++L A +++ + LGK+L +S + G +I
Sbjct: 328 THGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNI 387
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVL 536
++D+ + G L++A ++ K MP + N W +L++A + D E + E++
Sbjct: 388 EHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIK 447
Query: 537 LGYQPDS 543
L +P++
Sbjct: 448 L--EPNN 452
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 143/277 (51%), Gaps = 3/277 (1%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I ++V GFD S I G L +AR++FD+M ++ N +++GY K G+
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 89 LSIAKEIFDSMV--ERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
+ A+ + + M RN V++T +I GY+KS + EA ++F RM +PD VT + +L
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
S C D ++ ++ S+V G + AV + N++ID Y K + A +++ + +R+ V
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI-HGY 265
T+ +IAG A G EA+ +F M G +D TF A+L A + + G+++ +
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
K + N+ ++D + L EA ++ MP
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP 414
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 151/366 (41%), Gaps = 53/366 (14%)
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
F T L + N +L+ +Q H I+T + + L ++ + A +F
Sbjct: 17 FVTSLKIHGN--NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQP 74
Query: 404 SRCTVPWTAMISA----NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
T MI A + N H ++ ++ ++ D TF VLK + ++ +
Sbjct: 75 CPNTYLHNTMIRALSLLDEPNAH-SIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVW 133
Query: 460 LGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE----------------- 502
G+Q+H ++ GF SS++ + L+ MY CG L DA ++F E
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 503 --------------MP--ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
MP RN VSW +IS YA +G +++F+ M++ +PD V+
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 547 LCVFTACSHWGLVEEGLRY-----FNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
L V +AC+ G +E G R M + L +++D+ +SG KA +
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSL------NNAVIDMYAKSGNITKALDV 307
Query: 602 IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
E + + + W++I+ H + A ++ V + ++ + + + G
Sbjct: 308 F-ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG- 365
Query: 662 WESVGK 667
W +GK
Sbjct: 366 WVDLGK 371
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 187/447 (41%), Gaps = 43/447 (9%)
Query: 7 KIPLKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQT----GQLSEAR 62
KI NL +L + Y ++ TG + R N + ++ G L A
Sbjct: 22 KIHGNNLKTLKQSHCY----------MIITGLN----RDNLNVAKFIEACSNAGHLRYAY 67
Query: 63 ELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVT-YTLLIGGYSKSDQFI 121
+F P NT N MI LS+ E + A+T Y L +K D F
Sbjct: 68 SVFTHQPCPNTYLHNTMIRA------LSLLDEPNAHSI---AITVYRKLWALCAKPDTFT 118
Query: 122 EAF--KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGH-----DSAV 174
F K+ VR+ V + + ++ GL Q++ LG D +
Sbjct: 119 FPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEML 178
Query: 175 I----ICNSLIDSYCKMHCVDLASQLYKEMP--QRDSVTYNALIAGYANEGFNKEAIKLF 228
+ + N+L+ Y K+ +D A L + MP R+ V++ +I+GYA G EAI++F
Sbjct: 179 VKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVF 238
Query: 229 MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKH 288
M E + T AVL A L + G++I Y + V + NA++D Y+K
Sbjct: 239 QRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKS 298
Query: 289 DCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
+ +A +F + E + V++ +I A G E++ +F ++ + F +L
Sbjct: 299 GNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 349 SLAANMLDLQMGRQL-HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT 407
S +++ + +G++L +S + ++D+ + + EA+ + + +
Sbjct: 359 SACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKAN 418
Query: 408 VP-WTAMISANVQNGHFEESLKLFSEM 433
W ++++A+ + E + SE+
Sbjct: 419 AAIWGSLLAASNVHHDLELGERALSEL 445
>AT1G64310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23866053-23867711 FORWARD
Length = 552
Score = 252 bits (644), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 257/497 (51%), Gaps = 8/497 (1%)
Query: 193 ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
A +L+ P+R +N++I YA + LF ++ +FT+ A L G
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY-ACLARGFS 117
Query: 253 LD-DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
D + IHG A+ + L ++ G+A++ YSK +VEA KLF +P+ D +N+
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD---LQMGRQLHSQAI 368
MI Y G + INLF +Q + + TM++L + ++D L + +H+ +
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCY---TMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
DS V ALV+MY++C A +F +S V +++I+ + G+ +E+L
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALH 294
Query: 429 LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYA 488
LF+E+R D A VL + A L+ GK++HSY+IR G I SAL+DMY+
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYS 354
Query: 489 KCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLC 548
KCG LK A+ +F +PE+N+VS+N+LI +G + F E++ +G PD ++F
Sbjct: 355 KCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSA 414
Query: 549 VFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD 608
+ C H GL+ +G F M + + P+ EHY +V ++ +GK ++A + + +
Sbjct: 415 LLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKP 474
Query: 609 PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKV 668
D + ++L+ C +H+N LA+ AE + R + V +SN+ A G+W+ V ++
Sbjct: 475 IDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERL 534
Query: 669 KKAMRERGLTKVPAYSW 685
+ + E K+P SW
Sbjct: 535 RDGISESYGGKLPGISW 551
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 191/376 (50%), Gaps = 6/376 (1%)
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
A+++FD ER+ + +I Y+K+ QF LF ++ RS T+PD T+ L G ++
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 152 PKMIKGLFQVH--SHVVKLGHDSAVIICNS-LIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
KGL +H + V LG D IC S ++ +Y K + AS+L+ +P D +
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQ---ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALW 175
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
N +I GY GF + I LF M+ G + + +T A+ I + +H + +K
Sbjct: 176 NVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLK 235
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
L + +VG AL++ YS+ C+ A +F + E D V+ + +IT Y+ G KE+++L
Sbjct: 236 INLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHL 295
Query: 329 FRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK 388
F +L+ + A +L A + D G+++HS I + ++ V +AL+DMY+K
Sbjct: 296 FAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSK 355
Query: 389 CRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASV 448
C + A +F + + V + ++I +G + + F+E+ + D+ TF+++
Sbjct: 356 CGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSAL 415
Query: 449 LKASANLASISLGKQL 464
L + ++ G+++
Sbjct: 416 LCTCCHSGLLNKGQEI 431
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 200/442 (45%), Gaps = 42/442 (9%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
Q++H + K+ L + + L FY+ +D L+ ARKLF PE +N +I AYA
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA 379
++LF ++ + NF +A + + D + R +H AIV+ + +
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
+A+V Y+K EA ++F + W MI G +++ + LF+ M+
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
+ T ++ + + + + +H++ ++ S Y G ALV+MY++C + A +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 500 FKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS----- 554
F + E ++V+ ++LI+ Y+ G+ + L LF E+ + G +PD V V +C+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 555 ------HWGLVEEGLR-----------------YFNSMTKVYKLVPKRE--HYASIVDVL 589
H ++ GL ++ +P++ + S++ L
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 590 CRSG----KFDKAEKLIAEMPFDPDEIMWSSILNSC----RIHKNQDLAKRAAEQLFNME 641
G F+K +++ EM PDEI +S++L +C ++K Q++ +R + F +E
Sbjct: 385 GLHGFASTAFEKFTEIL-EMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE-FGIE 442
Query: 642 VLRDAAPYVTMSNILAEAGQWE 663
YV M ++ AG+ E
Sbjct: 443 --PQTEHYVYMVKLMGMAGKLE 462
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 142/299 (47%), Gaps = 6/299 (2%)
Query: 65 FDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAF 124
FDQ I + ++ Y K G + A ++F S+ + + + ++I GY + +
Sbjct: 139 FDQ------ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGI 192
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
LF M G +P+ T V L SG DP ++ + VH+ +K+ DS + +L++ Y
Sbjct: 193 NLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMY 252
Query: 185 CKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQ 244
+ C+ A ++ + + D V ++LI GY+ G +KEA+ LF E+R G +
Sbjct: 253 SRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVA 312
Query: 245 AVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL 304
VL + L D G+++H Y ++ L ++ V +AL+D YSK L A LF +PE
Sbjct: 313 IVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEK 372
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
+ VS+N +I G + F ++ F+ +L + L G+++
Sbjct: 373 NIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT4G32450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15661092-15662705 FORWARD
Length = 537
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 217/397 (54%), Gaps = 21/397 (5%)
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG 480
G ++++++ R + D + + + ++ K +H +I S +S I A
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
+++++MY+ CGS++DA+ +F MPERN+ +W +I +A NG GE + F G +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 541 PDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEK 600
PD F +F AC G + EGL +F SM K Y ++P EHY S+V +L G D+A +
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 601 LIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
+ M +P+ +W +++N R+H + L R + + ++ R N ++AG
Sbjct: 340 FVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASR--------LNKESKAG 389
Query: 661 --QWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQ 718
+S VK+ ++ + K P Y + A D + P+ +E+ + + L E
Sbjct: 390 LVPVKSSDLVKEKLQR--MAKGPNYG-------IRYMAAGDISRPENRELYMALKSLKEH 440
Query: 719 MEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDC 778
M + GYVP + ALH+ D++ K E+L H+ER A + TP S I VMKNLR C DC
Sbjct: 441 MIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADC 500
Query: 779 HAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
H A+K++SKIVGRE+ RD+ RFHH KDG+CSCR+YW
Sbjct: 501 HNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
L + LQ + +H + S++ N++++MY+ C E+A +F + R
Sbjct: 190 LCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLET 249
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG-KQLHSYI 468
W +I +NG E+++ FS +++ D F + A L ++ G S
Sbjct: 250 WCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMY 309
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
G + + +LV M A+ G L +A++ + M E NV W L++ +GD
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVHGD 363
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 212/366 (57%), Gaps = 3/366 (0%)
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
D + G H A+ S+V + ++LV +Y E A ++F ++ R V WTAMIS
Sbjct: 135 DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMIS 194
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
Q + LKL+S+MR+ + TF ++L A ++ G+ +H + G S
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS 254
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMV 535
++ ++L+ MY KCG LKDA +IF + ++VVSWN++I+ YA +G ++LFE M+
Sbjct: 255 YLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMM 314
Query: 536 -LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGK 594
G +PD++++L V ++C H GLV+EG ++FN M + + L P+ HY+ +VD+L R G
Sbjct: 315 PKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGL 373
Query: 595 FDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSN 654
+A +LI MP P+ ++W S+L SCR+H + RAAE+ +E AA +V ++N
Sbjct: 374 LQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEP-DCAATHVQLAN 432
Query: 655 ILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDI 714
+ A G W+ V+K M+++GL P SW+EI + V +F A D ++ +M EI+ +
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHC 492
Query: 715 LSEQME 720
L + ME
Sbjct: 493 LIDHME 498
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 149/290 (51%), Gaps = 4/290 (1%)
Query: 255 DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
D G H A+K I +V++G++L+ Y + A K+F +MPE + VS+ MI+
Sbjct: 135 DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMIS 194
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
+A + + L+ K++ + D ++ F +LS L GR +H Q + S
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKS 254
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS-EM 433
+ ++N+L+ MY KC ++A RIF + S++ V W +MI+ Q+G ++++LF M
Sbjct: 255 YLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMM 314
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
+ D T+ VL + + + G++ + + G + S LVD+ + G L
Sbjct: 315 PKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLL 374
Query: 494 KDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
++A+++ + MP + N V W +L+ + +GD ++ EE ++L +PD
Sbjct: 375 QEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLML--EPD 422
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y G++ A ++F+ M ERN V++T +I G+++ + KL+ +M +S + P+ TF
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL--ASQLYKEM 200
LLS C + VH + +G S + I NSLI YCK C DL A +++ +
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCK--CGDLKDAFRIFDQF 282
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLF-MEMRDLGFETSDFTFQAVL----YAGIGLDD 255
+D V++N++IAGYA G +AI+LF + M G + T+ VL +AG+ +
Sbjct: 283 SNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
F + + +K L N + + L+D + L EA +L MP
Sbjct: 343 RKFFNLMAEHGLKPEL--NHY--SCLVDLLGRFGLLQEALELIENMP 385
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 11/252 (4%)
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
S ++RD + D +S +++ G H ++ GF+S +Y GS+LV +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
G +++A ++F+EMPERNVVSW A+IS +A + LKL+ +M P+ +F +
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
+AC+ G + +G R + T L S++ + C+ G A ++ + + D
Sbjct: 229 SACTGSGALGQG-RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKD 286
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLR-----DAAPYVTMSNILAEAGQWESV 665
+ W+S++ + LA +A E LF + + + DA Y+ + + AG +
Sbjct: 287 VVSWNSMIAG---YAQHGLAMQAIE-LFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEG 342
Query: 666 GKVKKAMRERGL 677
K M E GL
Sbjct: 343 RKFFNLMAEHGL 354
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%)
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
R G D + + C + + H +K G S V + +SL+ Y V+
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 192 LASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
A ++++EMP+R+ V++ A+I+G+A E +KL+ +MR + +D+TF A+L A
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
G + G+ +H + L + + N+L+ Y K L +A ++F + D VS+N
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 312 MITAYAWTGLIKESINLF 329
MI YA GL ++I LF
Sbjct: 293 MIAGYAQHGLAMQAIELF 310
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 52/255 (20%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTIS----SNVMISGYLKE 86
+++ K+ DP+ + +G L + R + Q + S SN +IS Y K
Sbjct: 210 SKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKC 269
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLF-VRMCRSGTKPDYVTFVTL 145
G L A IFD ++ V++ +I GY++ ++A +LF + M +SGTKPD +T++ +
Sbjct: 270 GDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGV 329
Query: 146 LSGCNDPKMIK------GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE 199
LS C ++K L H +L H S L+D + + A +L +
Sbjct: 330 LSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSC------LVDLLGRFGLLQEALELIEN 383
Query: 200 MPQR-DSVTYNALIAG----------------------------------YANEGFNKEA 224
MP + +SV + +L+ YA+ G+ KEA
Sbjct: 384 MPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEA 443
Query: 225 IKLFMEMRDLGFETS 239
+ M+D G +T+
Sbjct: 444 ATVRKLMKDKGLKTN 458
>AT2G15690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6831855-6833594 REVERSE
Length = 579
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 208/386 (53%), Gaps = 34/386 (8%)
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
E+ D+ F + ++ ANL S+ K++H + ++S F + ++ M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 492 SLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFT 551
S+ DA ++F M ++++ SW+ ++ AY+ NG G+ L LFEEM G +P+ +FL VF
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 552 ACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDE 611
AC+ G +EE +F+SM + + PK EHY ++ VL + G +AE+ I ++PF+P
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKA 671
W ++ N R+H + DL + E++ D P + N + K+
Sbjct: 406 DFWEAMRNYARLHGDIDLED------YMEELMVDVDPSKAVINKIPTP--------PPKS 451
Query: 672 MRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEG--YVPDTS 729
+E + + K I + + + D E K+G YVPDT
Sbjct: 452 FKETNM----------VTSKSRIL--------EFRNLTFYKDEAKEMAAKKGVVYVPDTR 493
Query: 730 CALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIV 789
LH+ D++ K ++L YHSERLAIA+ +I TP + ++KNLR C DCH IK++SKI+
Sbjct: 494 FVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKII 553
Query: 790 GREITVRDSSRFHHFKDGICSCRDYW 815
GR + VRD+ RFHHFKDG CSC DYW
Sbjct: 554 GRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 2/182 (1%)
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS 403
F + AN+ L+ +++H + + + + N ++ M+ +C +A+R+F +
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG-K 462
+ W M+ A NG +++L LF EM + + ++ TF +V A A + I
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFL 358
Query: 463 QLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASN 521
S G ++ + KCG L +A Q +++P E W A+ + +
Sbjct: 359 HFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLH 418
Query: 522 GD 523
GD
Sbjct: 419 GD 420
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 124 FKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
+K + + G PD FV L C + K ++ +VH H ++ + N +I
Sbjct: 221 YKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISM 280
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
+ + + A +++ M +D +++ ++ Y++ G +A+ LF EM G + ++ TF
Sbjct: 281 FGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETF 340
Query: 244 QAVLY--AGIGLDDIAF-----GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
V A +G + AF + HG + KT V L K LVEA +
Sbjct: 341 LTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGV------LGVLGKCGHLVEAEQ 394
Query: 297 LFYKMP 302
+P
Sbjct: 395 YIRDLP 400
>AT2G17210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7485398-7487602 REVERSE
Length = 715
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/628 (27%), Positives = 309/628 (49%), Gaps = 22/628 (3%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y+K G L FD M R++V++ +++ G E F ++ G +P+ T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 143 VTLLSGCNDPKMIKGLF----QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
V ++ C + L+ ++H +V++ G + NS++ Y + A +L+
Sbjct: 131 VLVIHAC------RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFD 183
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDDIA 257
EM +RD ++++ +I Y +KLF EM + E T +VL A ++DI
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Query: 258 FGQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY 316
G+ +HG++++ + +VFV N+L+D YSK + A ++F + + VS+N ++ +
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF 303
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
E++ +F + + ++L + + +H I +S
Sbjct: 304 VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNE 363
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
+ ++L+D Y C ++A + ++ + V + MIS G +E++ +F MR
Sbjct: 364 VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD- 422
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGF-MSSIYAGSALVDMYAKCGSLKD 495
T + T S+L A + A + K H IR ++ I G+++VD YAKCG+++
Sbjct: 423 --TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEM 480
Query: 496 AIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
A + F ++ E+N++SW +ISAYA NG + L LF+EM GY P++V++L +AC+H
Sbjct: 481 ARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNH 540
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD--PDEIM 613
GLV++GL F SM + P +HY+ IVD+L R+G+ D A +LI +P D
Sbjct: 541 GGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASA 599
Query: 614 WSSILNSCRIH-KNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAM 672
W +IL+ CR K + ++ +E L + Y+ S+ A WE V +++ +
Sbjct: 600 WGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSG-YLLASSTFAAEKSWEDVAMMRRLV 658
Query: 673 RERGLTKVPAYSWVEIKHKVHIFCANDK 700
+ER + V YS V + F A DK
Sbjct: 659 KERKVRVVAGYSMVREGNLAKRFLAGDK 686
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 221/499 (44%), Gaps = 71/499 (14%)
Query: 271 LIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFR 330
L W +F GN++ DFY K L + F M D VS+N+++ G +E + F
Sbjct: 58 LSW-LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 116
Query: 331 KLQFTKYDRRNFPFATMLSLAANM-LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKC 389
KL+ ++ ++ ++ D G ++H I + V N+++ MYA
Sbjct: 117 KLRVWGFEPNTSTLVLVIHACRSLWFD---GEKIHGYVIRSGFCGISSVQNSILCMYAD- 172
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT-ADQATFASV 448
A ++F ++S R + W+ +I + VQ+ LKLF EM + T D T SV
Sbjct: 173 SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 449 LKASANLASISLGKQLHSYIIRSGF-MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERN 507
LKA + I +G+ +H + IR GF ++ ++ ++L+DMY+K + A ++F E RN
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 292
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMV-------------LL----------------- 537
+VSWN++++ + N + L++F MV LL
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 538 -----GYQPDSV---SFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVL 589
GY+ + V S + +T+CS LV++ +SMT YK V ++++ L
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCS---LVDDAGTVLDSMT--YKDVVS---CSTMISGL 404
Query: 590 CRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV-LRDAAP 648
+G+ D+A + M P+ I S+LN+C + + +K A + + D +
Sbjct: 405 AHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 649 YVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEI 708
++ + A+ G E + + E+ + SW I I DK
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQITEKNII-----SWTVIISAYAINGLPDKALA----- 514
Query: 709 ILKIDILSEQMEKEGYVPD 727
L ++M+++GY P+
Sbjct: 515 ------LFDEMKQKGYTPN 527
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 151/318 (47%), Gaps = 36/318 (11%)
Query: 34 VKTGFDPSTSRSNYQIMDLVQTG-QLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
++ GFD + ++D+ G + A +FD+ RN +S N +++G++
Sbjct: 253 IRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV-------- 304
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP 152
+ ++ EA ++F M + + D VT V+LL C
Sbjct: 305 -----------------------HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFF 341
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALI 212
+ +H +++ G++S + +SLID+Y VD A + M +D V+ + +I
Sbjct: 342 EQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMI 401
Query: 213 AGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLI 272
+G A+ G + EAI +F MRD + T ++L A D+ + HG A++ +L
Sbjct: 402 SGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA 458
Query: 273 WN-VFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRK 331
N + VG +++D Y+K + AR+ F ++ E + +S+ ++I+AYA GL +++ LF +
Sbjct: 459 INDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDE 518
Query: 332 LQFTKYDRRNFPFATMLS 349
++ Y + LS
Sbjct: 519 MKQKGYTPNAVTYLAALS 536
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 420 NGHFEESLKLFSEMRRDNVT-ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIY 478
+G + E + +SE++R V D F V KA A L S ++
Sbjct: 22 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKL-------------------SWLF 62
Query: 479 AGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG 538
G+++ D Y KCG L ++ F M R+ VSWN ++ G E L F ++ + G
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 539 YQPDSVSFLCVFTAC-SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDV----LCRSG 593
++P++ + + V AC S W F+ K++ V R + I V LC
Sbjct: 123 FEPNTSTLVLVIHACRSLW---------FDG-EKIHGYVI-RSGFCGISSVQNSILCMYA 171
Query: 594 KFD--KAEKLIAEMPFDPDEIMWSSILNS 620
D A KL EM + D I WS ++ S
Sbjct: 172 DSDSLSARKLFDEMS-ERDVISWSVVIRS 199
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 246 bits (629), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/609 (26%), Positives = 285/609 (46%), Gaps = 40/609 (6%)
Query: 119 QFIEAFKLFVRMCRSGTKPDYVTF--VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVII 176
Q EAF+ F + ++V + +LLS C Q+H+H + G + ++
Sbjct: 61 QLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVL 120
Query: 177 CNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGF 236
L+ Y + +D A + + + +N LI Y +E++ ++ M G
Sbjct: 121 VPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
+FT+ +V+ A L D A+G+ +HG ++ N++V NAL+ Y + + AR+
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARR 240
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM--------- 347
LF +M E D VS+N +I Y + E+ L ++ + + + T+
Sbjct: 241 LFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Query: 348 --------------------------LSLAANMLDLQMGRQLHSQAIVTTADSEVL--VA 379
L +++ L+ G+ H I + + S + V
Sbjct: 301 YIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR 360
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
N+L+ MY++C A +F ++ + W ++IS N EE+ L EM
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIR-SGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
+ T AS+L A + ++ GK+ H YI+R + + ++LVDMYAK G + A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
+F M +R+ V++ +LI Y G GE L F++M G +PD V+ + V +ACSH L
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
V EG F M V+ + + EHY+ +VD+ CR+G DKA + +P++P M +++L
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
+C IH N ++ + AA++L Y+ ++++ A G W + VK + + G+
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 679 KVPAYSWVE 687
K ++ +E
Sbjct: 661 KAHEFALME 669
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 206/447 (46%), Gaps = 51/447 (11%)
Query: 103 NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND------PKMIK 156
+ + + +LIG Y ++ +F E+ ++ RM G + D T+ +++ C +++
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 157 GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYA 216
G +V SH L +CN+LI Y + VD+A +L+ M +RD+V++NA+I Y
Sbjct: 208 GSIEVSSHRCNL------YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 217 NEGFNKEAIKLFMEMRDLGFETSDFTFQAV----LYAG--IGLDDIAFGQQ--------- 261
+E EA KL M G E S T+ + L AG IG + G +
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 262 --IHGYAVKT---TLIWN-VF----------------VGNALLDFYSKHDCLVEARKLFY 299
I+G + L W VF V N+L+ YS+ L A +F
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ 381
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
++ ++N +I+ +A+ +E+ L +++ + + + A++L L A + +LQ
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 360 GRQLHSQAIVTTADSEVLVA-NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANV 418
G++ H + + + L+ N+LVDMYAK A+R+F + R V +T++I
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSI 477
+ G E +L F +M R + D T +VL A ++ + G L + + G +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMP 504
S +VD+Y + G L A IF +P
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 187/402 (46%), Gaps = 26/402 (6%)
Query: 21 SYPNV-KTC---ID---ARIVKTGFDPSTSRSNYQIMDLV-----QTGQLSEARELFDQM 68
+YP+V K C +D R+V + S+ R N + + + + G++ AR LFD+M
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 69 PYRNTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAF 124
R+ +S N +I+ Y E KL A ++ D M VE + VT+ + GG ++ +I A
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK---LGHDSAVIICNSLI 181
V M + V + L C+ +K H V++ HD + NSLI
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR-NSLI 364
Query: 182 DSYCKMHCVDL--ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
Y + C DL A +++++ T+N++I+G+A ++E L EM GF +
Sbjct: 365 TMYSR--CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV-GNALLDFYSKHDCLVEARKLF 298
T ++L + ++ G++ H Y ++ + + N+L+D Y+K ++ A+++F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 299 YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
M + D V+Y +I Y G + ++ F+ + + + +LS ++ ++
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 359 MGRQLHSQ-AIVTTADSEVLVANALVDMYAKCRRPEEAERIF 399
G L ++ V + + +VD+Y + ++A IF
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 36 TGFDPSTSRSNYQIMDLVQTGQLSEARE----LFDQMPYRNT-ISSNVMISGYLKEGKLS 90
+GF P+ + + G L +E + + Y++ I N ++ Y K G++
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
AK +FDSM +R+ VTYT LI GY + + A F M RSG KPD+VT V +LS C+
Sbjct: 477 AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS 536
Query: 151 DPKMIK---GLFQVHSHV----VKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
+++ LF HV ++L H S ++D YC+ +D A ++ +P
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSC------MVDLYCRAGYLDKARDIFHTIPYE 590
Query: 204 DSVTYNA------LIAGYANEGFNKEAIKLFMEMR 232
S A LI G N G A KL +E +
Sbjct: 591 PSSAMCATLLKACLIHGNTNIG-EWAADKLLLETK 624
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 10/232 (4%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +I+ Y + L A +F + + T+ +I G++ +++ E L M SG
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL-GHDSAVIICNSLIDSYCKMHCVDLASQ 195
P+++T ++L ++ + H ++++ + +I+ NSL+D Y K + A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ M +RD VTY +LI GY G + A+ F +M G + T AVL A +
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 256 IAFGQQI-----HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ G + H + ++ L + ++D Y + L +AR +F+ +P
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 246 bits (629), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/609 (26%), Positives = 285/609 (46%), Gaps = 40/609 (6%)
Query: 119 QFIEAFKLFVRMCRSGTKPDYVTF--VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVII 176
Q EAF+ F + ++V + +LLS C Q+H+H + G + ++
Sbjct: 61 QLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVL 120
Query: 177 CNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGF 236
L+ Y + +D A + + + +N LI Y +E++ ++ M G
Sbjct: 121 VPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI 180
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
+FT+ +V+ A L D A+G+ +HG ++ N++V NAL+ Y + + AR+
Sbjct: 181 RADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARR 240
Query: 297 LFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM--------- 347
LF +M E D VS+N +I Y + E+ L ++ + + + T+
Sbjct: 241 LFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Query: 348 --------------------------LSLAANMLDLQMGRQLHSQAIVTTADSEVL--VA 379
L +++ L+ G+ H I + + S + V
Sbjct: 301 YIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR 360
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
N+L+ MY++C A +F ++ + W ++IS N EE+ L EM
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIR-SGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
+ T AS+L A + ++ GK+ H YI+R + + ++LVDMYAK G + A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 499 IFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL 558
+F M +R+ V++ +LI Y G GE L F++M G +PD V+ + V +ACSH L
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 559 VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSIL 618
V EG F M V+ + + EHY+ +VD+ CR+G DKA + +P++P M +++L
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 619 NSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
+C IH N ++ + AA++L Y+ ++++ A G W + VK + + G+
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 679 KVPAYSWVE 687
K ++ +E
Sbjct: 661 KAHEFALME 669
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 206/447 (46%), Gaps = 51/447 (11%)
Query: 103 NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND------PKMIK 156
+ + + +LIG Y ++ +F E+ ++ RM G + D T+ +++ C +++
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVH 207
Query: 157 GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYA 216
G +V SH L +CN+LI Y + VD+A +L+ M +RD+V++NA+I Y
Sbjct: 208 GSIEVSSHRCNL------YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 217 NEGFNKEAIKLFMEMRDLGFETSDFTFQAV----LYAG--IGLDDIAFGQQ--------- 261
+E EA KL M G E S T+ + L AG IG + G +
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSV 321
Query: 262 --IHGYAVKT---TLIWN-VF----------------VGNALLDFYSKHDCLVEARKLFY 299
I+G + L W VF V N+L+ YS+ L A +F
Sbjct: 322 AMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQ 381
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
++ ++N +I+ +A+ +E+ L +++ + + + A++L L A + +LQ
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 360 GRQLHSQAIVTTADSEVLVA-NALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANV 418
G++ H + + + L+ N+LVDMYAK A+R+F + R V +T++I
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSI 477
+ G E +L F +M R + D T +VL A ++ + G L + + G +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMP 504
S +VD+Y + G L A IF +P
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 187/402 (46%), Gaps = 26/402 (6%)
Query: 21 SYPNV-KTC---ID---ARIVKTGFDPSTSRSNYQIMDLV-----QTGQLSEARELFDQM 68
+YP+V K C +D R+V + S+ R N + + + + G++ AR LFD+M
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 69 PYRNTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAF 124
R+ +S N +I+ Y E KL A ++ D M VE + VT+ + GG ++ +I A
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK---LGHDSAVIICNSLI 181
V M + V + L C+ +K H V++ HD + NSLI
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR-NSLI 364
Query: 182 DSYCKMHCVDL--ASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
Y + C DL A +++++ T+N++I+G+A ++E L EM GF +
Sbjct: 365 TMYSR--CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV-GNALLDFYSKHDCLVEARKLF 298
T ++L + ++ G++ H Y ++ + + N+L+D Y+K ++ A+++F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 299 YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
M + D V+Y +I Y G + ++ F+ + + + +LS ++ ++
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 359 MGRQLHSQ-AIVTTADSEVLVANALVDMYAKCRRPEEAERIF 399
G L ++ V + + +VD+Y + ++A IF
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 36 TGFDPSTSRSNYQIMDLVQTGQLSEARE----LFDQMPYRNT-ISSNVMISGYLKEGKLS 90
+GF P+ + + G L +E + + Y++ I N ++ Y K G++
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 91 IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN 150
AK +FDSM +R+ VTYT LI GY + + A F M RSG KPD+VT V +LS C+
Sbjct: 477 AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS 536
Query: 151 DPKMIK---GLFQVHSHV----VKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
+++ LF HV ++L H S ++D YC+ +D A ++ +P
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSC------MVDLYCRAGYLDKARDIFHTIPYE 590
Query: 204 DSVTYNA------LIAGYANEGFNKEAIKLFMEMR 232
S A LI G N G A KL +E +
Sbjct: 591 PSSAMCATLLKACLIHGNTNIG-EWAADKLLLETK 624
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 10/232 (4%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +I+ Y + L A +F + + T+ +I G++ +++ E L M SG
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL-GHDSAVIICNSLIDSYCKMHCVDLASQ 195
P+++T ++L ++ + H ++++ + +I+ NSL+D Y K + A +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ M +RD VTY +LI GY G + A+ F +M G + T AVL A +
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 256 IAFGQQI-----HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ G + H + ++ L + ++D Y + L +AR +F+ +P
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDIFHTIP 588
>AT2G42920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17858705-17860384 FORWARD
Length = 559
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/566 (28%), Positives = 275/566 (48%), Gaps = 76/566 (13%)
Query: 155 IKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL--ASQLYKEMPQRDSVTYNALI 212
++ L Q+H+ ++K G S + + ++ ++C D+ A ++ + ++ +N +I
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVL-AFCCASPSDMNYAYLVFTRINHKNPFVWNTII 96
Query: 213 AGYANEGFNKEAIKLFMEM--RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT 270
G++ F + AI +F++M + T+ +V A L G+Q+HG +K
Sbjct: 97 RGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 271 LIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFR 330
L E D N M+ Y G + E+ +F
Sbjct: 157 L-------------------------------EDDSFIRNTMLHMYVTCGCLIEAWRIF- 184
Query: 331 KLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCR 390
L +D V+ N+++ +AKC
Sbjct: 185 -LGMIGFD-------------------------------------VVAWNSMIMGFAKCG 206
Query: 391 RPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLK 450
++A+ +F ++ R V W +MIS V+NG F+++L +F EM+ +V D T S+L
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 451 ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS 510
A A L + G+ +H YI+R+ F + +AL+DMY KCG +++ + +F+ P++ +
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 511 WNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMT 570
WN++I A+NG E + LF E+ G +PDSVSF+ V TAC+H G V +F M
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 571 KVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLA 630
+ Y + P +HY +V+VL +G ++AE LI MP + D ++WSS+L++CR N ++A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 631 KRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKH 690
KRAA+ L ++ + YV +SN A G +E + + M+ER + K S +E+
Sbjct: 447 KRAAKCLKKLDP-DETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDF 505
Query: 691 KVHIFCANDKNHPQMKEIILKIDILS 716
+VH F + HP+ EI +DIL+
Sbjct: 506 EVHEFISCGGTHPKSAEIYSLLDILN 531
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 20/294 (6%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIA 92
++K G + + N + V G L EA +F M + ++ N MI G+ K G + A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 93 KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDP 152
+ +FD M +RN V++ +I G+ ++ +F +A +F M KPD T V+LL+ C
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALI 212
+ +H ++V+ + I+ +LID YCK C++ +++ P++ +N++I
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 213 AGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA-----GIGLDDIAFGQQIHGYAV 267
G AN GF + A+ LF E+ G E +F VL A + D F Y +
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 268 KT-----TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP-ELDGVSYNMMITA 315
+ TL+ NV G LL+ EA L MP E D V ++ +++A
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLE---------EAEALIKNMPVEEDTVIWSSLLSA 436
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 182/423 (43%), Gaps = 53/423 (12%)
Query: 41 STSRSNYQI-MDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM 99
ST R QI L++TG +S+ +S V+ ++ A +F +
Sbjct: 36 STMRELKQIHASLIKTGLISD-----------TVTASRVLAFCCASPSDMNYAYLVFTRI 84
Query: 100 VERNAVTYTLLIGGYSKSDQFIEAFKLFVRM-CRS-GTKPDYVTFVTLLSGCNDPKMIKG 157
+N + +I G+S+S A +F+ M C S KP +T+ ++ +
Sbjct: 85 NHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARD 144
Query: 158 LFQVHSHVVKLGHDS-------------------------------AVIICNSLIDSYCK 186
Q+H V+K G + V+ NS+I + K
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 187 MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
+D A L+ EMPQR+ V++N++I+G+ G K+A+ +F EM++ + FT ++
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
L A L G+ IH Y V+ N V AL+D Y K C+ E +F P+
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG----RQ 362
+N MI A G + +++LF +L+ + + + F +L+ A+ ++ R
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS-SRCTVPWTAMISANVQNG 421
+ + ++ + + +V++ EEAE + + TV W++++SA + G
Sbjct: 385 MKEKYMI---EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 422 HFE 424
+ E
Sbjct: 442 NVE 444
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 231/410 (56%), Gaps = 14/410 (3%)
Query: 362 QLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNG 421
QLH Q ++ L+ L+D Y+K A ++F ++ R W A+I+ V
Sbjct: 130 QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 422 HFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL-HSYIIRSGFMSSIYAG 480
E+++L+ M + + + T + L A ++L + G+ + H Y ++
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVS 244
Query: 481 SALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
+A +DMY+KCG + A Q+F++ +++VV+WN +I+ +A +G+ L++F+++ G
Sbjct: 245 NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGI 304
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR-EHYASIVDVLCRSGKFDKA 598
+PD VS+L TAC H GLVE GL FN+M K V + +HY +VD+L R+G+ +A
Sbjct: 305 KPDDVSYLAALTACRHAGLVEYGLSVFNNMA--CKGVERNMKHYGCVVDLLSRAGRLREA 362
Query: 599 EKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
+I M PD ++W S+L + I+ + ++A+ A+ ++ M V D +V +SN+ A
Sbjct: 363 HDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDG-DFVLLSNVYAA 421
Query: 659 AGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQ 718
G+W+ VG+V+ M + + K+P S++E K +H F +DK+H Q +EI KID + +
Sbjct: 422 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 481
Query: 719 MEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALI---STPEGSP 765
+ ++GYV T LH+ E+ K +L YHSE+LA+A+ L+ E SP
Sbjct: 482 IREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESP 531
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 155/343 (45%), Gaps = 20/343 (5%)
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT------KPDYV 140
G LS A +IF + + + +I G++ S AF + M + + + D +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM 200
T L C + Q+H + + G + ++C +L+D+Y K + A +L+ EM
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 201 PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
P RD ++NALIAG + EA++L+ M G S+ T A L A L D+ G+
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 261 QI-HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-VSYNMMITAYAW 318
I HGY+ NV V NA +D YSK + +A ++F + V++N MIT +A
Sbjct: 231 NIFHGYSND-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
G ++ +F KL+ + + L+ + ++ G + + + +
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKH 345
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISAN 417
+VD+ ++ R EA I +S +P W +++ A+
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMS---MIPDPVLWQSLLGAS 385
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 11/272 (4%)
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT------ADQATFASV 448
A +IF + T W A+I + H + + M + + + D T +
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFT 115
Query: 449 LKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV 508
LKA A S QLH I R G + + L+D Y+K G L A ++F EMP R+V
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 509 VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNS 568
SWNALI+ S ++L++ M G + V+ + ACSH G V+EG F+
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG 235
Query: 569 MTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQD 628
+ +V + +D+ + G DKA ++ + + W++++ +H
Sbjct: 236 YSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 629 LAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
A ++L + + D Y+ AG
Sbjct: 291 RALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 11/182 (6%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+++ ++ Y K G L A ++FD M R+ ++ LI G ++ EA +L+ RM
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 132 RSGTKPDYVTFVTLLSGCN---DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMH 188
G + VT V L C+ D K + +F +S + VI+ N+ ID Y K
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-------NDNVIVSNAAIDMYSKCG 255
Query: 189 CVDLASQLYKEMPQRDS-VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
VD A Q++++ + S VT+N +I G+A G A+++F ++ D G + D ++ A L
Sbjct: 256 FVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAAL 315
Query: 248 YA 249
A
Sbjct: 316 TA 317
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 225/437 (51%), Gaps = 42/437 (9%)
Query: 274 NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
NV + ++++ Y + LV AR+ F PE D V +N MI+ Y G + E+ +LF ++
Sbjct: 58 NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP 117
Query: 334 FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
+V+ N +++ YA E
Sbjct: 118 C---------------------------------------RDVMSWNTVLEGYANIGDME 138
Query: 394 EAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKAS 452
ER+F + R W +I QNG E L F M +V + AT VL A
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 453 ANLASISLGKQLHSYIIRSGFMS-SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSW 511
A L + GK +H Y G+ + +AL+DMY KCG+++ A+++FK + R+++SW
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISW 258
Query: 512 NALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
N +I+ A++G G L LF EM G PD V+F+ V AC H GLVE+GL YFNSM
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 572 VYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAK 631
+ ++P+ EH +VD+L R+G +A + I +MP D ++W+++L + +++K D+ +
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGE 378
Query: 632 RAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHK 691
A E+L +E R+ A +V +SNI +AG+++ ++K AMR+ G K SW+E
Sbjct: 379 VALEELIKLEP-RNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDG 437
Query: 692 VHIFCANDKNHPQMKEI 708
+ F ++ + HP+ +E+
Sbjct: 438 LVKFYSSGEKHPRTEEL 454
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 17/307 (5%)
Query: 20 NSYPNVKTCIDARIVKTGFDPSTSRS----NYQIMDLVQTGQLSEARELFDQMPYRNTIS 75
N Y K + AR FD S R N I ++ G + EAR LFDQMP R+ +S
Sbjct: 67 NGYLLNKDLVSARRY---FDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMS 123
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
N ++ GY G + + +FD M ERN ++ LI GY+++ + E F RM G+
Sbjct: 124 WNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS 183
Query: 136 -KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA-VIICNSLIDSYCKMHCVDLA 193
P+ T +LS C VH + LG++ V + N+LID Y K +++A
Sbjct: 184 VVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIA 243
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA---- 249
+++K + +RD +++N +I G A G EA+ LF EM++ G TF VL A
Sbjct: 244 MEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM 303
Query: 250 GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP-ELDGVS 308
G+ D +A+ + +++ + ++D S+ L +A + KMP + D V
Sbjct: 304 GLVEDGLAYFNSMF---TDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVI 360
Query: 309 YNMMITA 315
+ ++ A
Sbjct: 361 WATLLGA 367
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 20/366 (5%)
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
L C M + A++++ EM +++ V + ++I GY NK+ + DL E
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL---LNKDLVSA-RRYFDLSPE-R 88
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEARKLF 298
D + +G I G + ++ + +V N +L+ Y+ + ++F
Sbjct: 89 DIVLWNTMISGY----IEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 299 YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM-LSLAANMLDL 357
MPE + S+N +I YA G + E + F+++ N T+ LS A +
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 358 QMGRQLHSQAIVTTADS-EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA 416
G+ +H + +V V NAL+DMY KC E A +F + R + W MI+
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMING 264
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG-KQLHSYIIRSGFMS 475
+GH E+L LF EM+ ++ D+ TF VL A ++ + G +S M
Sbjct: 265 LAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMP 324
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISA---YASNGDGEATLKLF 531
I +VD+ ++ G L A++ +MP + + V W L+ A Y GE L
Sbjct: 325 EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVAL--- 381
Query: 532 EEMVLL 537
EE++ L
Sbjct: 382 EELIKL 387
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 134/308 (43%), Gaps = 47/308 (15%)
Query: 52 LVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLI 111
L G ++ A ++F +M +N + MI+GYL L A+ FD ER+ V + +I
Sbjct: 38 LCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMI 97
Query: 112 GGYSKSDQFIEAFKLFVRM-CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGH 170
GY + +EA LF +M CR
Sbjct: 98 SGYIEMGNMLEARSLFDQMPCRD------------------------------------- 120
Query: 171 DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFME 230
V+ N++++ Y + ++ +++ +MP+R+ ++N LI GYA G E + F
Sbjct: 121 ---VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 231 MRDLG-FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWN---VFVGNALLDFYS 286
M D G +D T VL A L FG+ +H Y TL +N V V NAL+D Y
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG--ETLGYNKVDVNVKNALIDMYG 235
Query: 287 KHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFAT 346
K + A ++F + D +S+N MI A G E++NLF +++ + F
Sbjct: 236 KCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVG 295
Query: 347 MLSLAANM 354
+L +M
Sbjct: 296 VLCACKHM 303
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/467 (30%), Positives = 253/467 (54%), Gaps = 13/467 (2%)
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDC--LVEARKLFYKMPELDGVSYNMMITAYAW 318
QIHG ++L + F+ + L+ S L AR L + ++NM+ Y+
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSS 90
Query: 319 TGLIKESINLFRKLQ--FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
+ ESI ++ +++ K ++ FPF +L A+ L L GRQ+ + + D +V
Sbjct: 91 SDSPVESIWVYSEMKRRGIKPNKLTFPF--LLKACASFLGLTAGRQIQVEVLKHGFDFDV 148
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
V N L+ +Y C++ +A ++F +++ R V W ++++A V+NG + F EM
Sbjct: 149 YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGK 208
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
D+ T +L A ++SLGK +HS ++ + G+ALVDMYAK G L+ A
Sbjct: 209 RFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVL-LGYQPDSVSFLCVFTACSH 555
+F+ M ++NV +W+A+I A G E L+LF +M+ +P+ V+FL V ACSH
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWS 615
GLV++G +YF+ M K++K+ P HY ++VD+L R+G+ ++A I +MPF+PD ++W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 616 SILNSCRIHKNQD---LAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAM 672
++L++C IH ++D + ++ ++L +E R + V ++N AEA W +V++ M
Sbjct: 387 TLLSACSIHHDEDDEGIGEKVKKRLIELEPKR-SGNLVIVANRFAEARMWAEAAEVRRVM 445
Query: 673 RERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQM 719
+E + K+ S +E+ H F + + I +D+ Q+
Sbjct: 446 KETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQL 492
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 182/398 (45%), Gaps = 13/398 (3%)
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHS--HVVKLGHDSAVIICNSLIDSYCKMH 188
C K + F+ L S IK L Q+H H+ L +DS +I + S
Sbjct: 8 CFKSRKHQCLIFLKLCSS------IKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAK 61
Query: 189 CVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
+ A L T+N L GY++ E+I ++ EM+ G + + TF +L
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLK 121
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
A + G+QI +K ++V+VGN L+ Y +ARK+F +M E + VS
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
+N ++TA G + F ++ ++ +LS +L +G+ +HSQ +
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVM 239
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLK 428
V + + ALVDMYAK E A +F ++ + W+AMI Q G EE+L+
Sbjct: 240 VRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQ 299
Query: 429 LFSEMRRD-NVTADQATFASVLKASANLASISLG-KQLHSYIIRSGFMSSIYAGSALVDM 486
LFS+M ++ +V + TF VL A ++ + G K H + A+VD+
Sbjct: 300 LFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDI 359
Query: 487 YAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGD 523
+ G L +A K+MP E + V W L+SA + + D
Sbjct: 360 LGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 155/346 (44%), Gaps = 5/346 (1%)
Query: 74 ISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
IS V +S L+ A+ + + T+ +L GYS SD +E+ ++ M R
Sbjct: 48 ISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRR 107
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLA 193
G KP+ +TF LL C + Q+ V+K G D V + N+LI Y A
Sbjct: 108 GIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDA 167
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
+++ EM +R+ V++N+++ G + F EM F D T VL + G
Sbjct: 168 RKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRF-CPDETTMVVLLSACG- 225
Query: 254 DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMI 313
+++ G+ +H + L N +G AL+D Y+K L AR +F +M + + +++ MI
Sbjct: 226 GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMI 285
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNF-PFATMLSLAANMLDLQMG-RQLHSQAIVTT 371
A G +E++ LF K+ R N+ F +L ++ + G + H +
Sbjct: 286 VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHK 345
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC-TVPWTAMISA 416
++ A+VD+ + R EA K+ V W ++SA
Sbjct: 346 IKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT1G71460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26928247-26930316 REVERSE
Length = 689
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 259/527 (49%), Gaps = 4/527 (0%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGG--YSKSDQFIEAFKLFVRMCRSGTK 136
++ Y G + A+++FD N ++ L+ G S ++ + F M G
Sbjct: 152 LVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVD 211
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
+ + + ++ + H+ +K G ++V + SL+D Y K V LA ++
Sbjct: 212 LNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRV 271
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDD 255
+ E+ +RD V + A+IAG A+ EA+ LF M + + +L +
Sbjct: 272 FDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKA 331
Query: 256 IAFGQQIHGYAVKT-TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
+ G+++H + +K+ + FV + L+D Y K + R++FY + + +S+ +++
Sbjct: 332 LKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMS 391
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
YA G +++ +Q + AT+L + A + ++ G+++H A+
Sbjct: 392 GYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP 451
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
V + +L+ MY+KC PE R+F +L R WTAMI V+N +++F M
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
D T VL ++L ++ LGK+LH +I++ F S + + ++ MY KCG L+
Sbjct: 512 LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
A F + + ++W A+I AY N + FE+MV G+ P++ +F V + CS
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
G V+E R+FN M ++Y L P EHY+ ++++L R G+ ++A++L
Sbjct: 632 QAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 225/448 (50%), Gaps = 10/448 (2%)
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
+++ + A + + + G + TF LL C K + QVH H+ G +S
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNK--EAIKLFMEM 231
+ L+ Y V A +++ E + ++NAL+ G G + + + F EM
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL 291
R+LG + + ++ V + G + G + H A+K L +VF+ +L+D Y K +
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKV 265
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFP----FATM 347
AR++F ++ E D V + MI A E++ LFR + + + +P T+
Sbjct: 266 GLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMI---SEEKIYPNSVILTTI 322
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSE-VLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
L + ++ L++G+++H+ + + E V + L+D+Y KC R+F R
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
+ WTA++S NG F+++L+ M+++ D T A+VL A L +I GK++H
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHC 442
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
Y +++ F+ ++ ++L+ MY+KCG + I++F + +RNV +W A+I Y N D A
Sbjct: 443 YALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRA 502
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACS 554
+++F M+L ++PDSV+ V T CS
Sbjct: 503 GIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 168/339 (49%), Gaps = 6/339 (1%)
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
++E R G + TF A+L A + + G+Q+H + L N F+ L+ Y+
Sbjct: 101 YLEQR--GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTA 158
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTG--LIKESINLFRKLQFTKYDRRNFPFA 345
+ +A+K+F + + S+N ++ +G ++ ++ F +++ D + +
Sbjct: 159 CGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLS 218
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
+ A L+ G + H+ AI + V + +LVDMY KC + A R+F ++ R
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQL 464
V W AMI+ N E+L LF M + + + ++L ++ ++ LGK++
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 465 HSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
H+++++S ++ + S L+D+Y KCG + ++F +RN +SW AL+S YA+NG
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG 562
+ L+ M G++PD V+ V C+ +++G
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 143/304 (47%), Gaps = 9/304 (2%)
Query: 338 DRRNFP-----FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRP 392
++R P F+ +L L G+Q+H + +S + LV MY C
Sbjct: 103 EQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSV 162
Query: 393 EEAERIFVKLSSRCTVPWTAMISANVQNG--HFEESLKLFSEMRRDNVTADQATFASVLK 450
++A+++F + +S W A++ V +G +++ L F+EMR V + + ++V K
Sbjct: 163 KDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFK 222
Query: 451 ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS 510
+ A +++ G + H+ I++G +S++ ++LVDMY KCG + A ++F E+ ER++V
Sbjct: 223 SFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVV 282
Query: 511 WNALISAYASNGDGEATLKLFEEMVL-LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
W A+I+ A N L LF M+ P+SV + ++ G +
Sbjct: 283 WGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDL 629
K V + ++ ++D+ C+ G ++ + I W+++++ + D
Sbjct: 343 LKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK-QRNAISWTALMSGYAANGRFDQ 401
Query: 630 AKRA 633
A R+
Sbjct: 402 ALRS 405
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 149/342 (43%), Gaps = 31/342 (9%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPD 138
+I Y K G ++ + +F +RNA+++T L+ GY+ + +F +A + V M + G +PD
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 417
Query: 139 YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
VT T+L C + + IK ++H + +K V + SL+ Y K + +L+
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 477
Query: 199 EMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
+ QR+ + A+I Y + I++F M T VL L +
Sbjct: 478 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 537
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
G+++HG+ +K FV ++ Y K L A F + +++ +I AY
Sbjct: 538 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 597
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN----------------MLDLQMGRQ 362
L +++IN F ++ + F F +LS+ + M +LQ +
Sbjct: 598 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 657
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
+S ++++ +C R EEA+R+ V SS
Sbjct: 658 HYS---------------LVIELLNRCGRVEEAQRLAVMSSS 684
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIY 478
+ + E +L + + + + + TF+++L+A S+ GKQ+H +I +G S+ +
Sbjct: 88 RQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 479 AGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDG--EATLKLFEEMVL 536
+ LV MY CGS+KDA ++F E NV SWNAL+ +G + L F EM
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 537 LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHY------ASIVDVLC 590
LG + S VF + + + +GL K + L K + S+VD+
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGL-------KTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 591 RSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ 627
+ GK A ++ E+ + D ++W +++ +K Q
Sbjct: 261 KCGKVGLARRVFDEI-VERDIVVWGAMIAGLAHNKRQ 296
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 226/418 (54%), Gaps = 25/418 (5%)
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA-IVTTADSEVL 377
TG +KE++ L L + +A +L + G+++H+Q +V A +E L
Sbjct: 89 TGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYL 145
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
L+ +YA LS +PW AMIS VQ G +E L ++ +MR++
Sbjct: 146 KVKLLI-LYA--------------LSD--LIPWNAMISGYVQKGLEQEGLFIYYDMRQNR 188
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
+ DQ TFASV +A + L + GK+ H+ +I+ S+I SALVDMY KC S D
Sbjct: 189 IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGH 248
Query: 498 QIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWG 557
++F ++ RNV++W +LIS Y +G LK FE+M G +P+ V+FL V TAC+H G
Sbjct: 249 RVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGG 308
Query: 558 LVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSI 617
LV++G +F SM + Y + P+ +HYA++VD L R+G+ +A + + + P +W S+
Sbjct: 309 LVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSL 368
Query: 618 LNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
L +CRIH N L + AA + ++ + YV +N A G E+ KV++ M G+
Sbjct: 369 LGACRIHGNVKLLELAATKFLELDPT-NGGNYVVFANGYASCGLREAASKVRRKMENAGV 427
Query: 678 TKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVP---DTSCAL 732
K P YS +E++ +VH F +D +H ++I K+ ++ Y P D+SC +
Sbjct: 428 KKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPDGLDSSCPV 485
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 27/334 (8%)
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
QR + + + G G KEA+ L G + T+ +L + G++
Sbjct: 73 QRKTEKLDKTLKGLCVTGRLKEAVGLLWSS---GLQVEPETYAVLLQECKQRKEYTKGKR 129
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
IH +FV L+ Y K L+ Y + +L + +N MI+ Y GL
Sbjct: 130 IHA---------QMFVVGFALNEYLKVKLLI-----LYALSDL--IPWNAMISGYVQKGL 173
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
+E + ++ ++ + + FA++ + + L+ G++ H+ I S ++V +A
Sbjct: 174 EQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSA 233
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
LVDMY KC + R+F +LS+R + WT++IS +G E LK F +M+ + +
Sbjct: 234 LVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPN 293
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRS--GFMSSIYAGSALVDMYAKCGSLKDAIQI 499
TF VL A + + G + H Y ++ G +A+VD + G L++A +
Sbjct: 294 PVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEF 352
Query: 500 FKEMP-ERNVVSWNALISAYASNGDGEATLKLFE 532
+ P + + W +L+ A +G+ +KL E
Sbjct: 353 VMKSPCKEHPPVWGSLLGACRIHGN----VKLLE 382
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 38/201 (18%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N I + ++ Y K S +FD + RN +T+T LI GY + E K F +M
Sbjct: 227 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK 286
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMI-KGLFQVHSHVVKLG------HDSAVI--------- 175
G +P+ VTF+ +L+ CN ++ KG +S G H +A++
Sbjct: 287 EEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 346
Query: 176 -----------------ICNSLIDSYCKMH----CVDLASQLYKEMPQRDSVTYNALIAG 214
+ SL+ + C++H ++LA+ + E+ + Y G
Sbjct: 347 QEAYEFVMKSPCKEHPPVWGSLLGA-CRIHGNVKLLELAATKFLELDPTNGGNYVVFANG 405
Query: 215 YANEGFNKEAIKLFMEMRDLG 235
YA+ G + A K+ +M + G
Sbjct: 406 YASCGLREAASKVRRKMENAG 426
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%)
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSH 164
+ + +I GY + E ++ M ++ PD TF ++ C+ ++ + H+
Sbjct: 159 IPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAV 218
Query: 165 VVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEA 224
++K S +I+ ++L+D Y K +++ ++ R+ +T+ +LI+GY G E
Sbjct: 219 MIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEV 278
Query: 225 IKLFMEMRDLGFETSDFTFQAVLYA 249
+K F +M++ G + TF VL A
Sbjct: 279 LKCFEKMKEEGCRPNPVTFLVVLTA 303
>AT5G42450.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16977660-16978850 FORWARD
Length = 396
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 210/358 (58%), Gaps = 8/358 (2%)
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLF 430
T D V+ L+ Y K EEA +F + R V W A+I Q G EE++ F
Sbjct: 33 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 92
Query: 431 SEMRRDNVT-ADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYA 488
+M R+ V +++TF + A +N+AS GK +H+ I+ G +++ ++L+ Y+
Sbjct: 93 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 152
Query: 489 KCGSLKDAIQIFKEMPE--RNVVSWNALISAYASNGDGEATLKLFEEMVL-LGYQPDSVS 545
KCG+++D++ F ++ E RN+VSWN++I YA NG GE + +FE+MV +P++V+
Sbjct: 153 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 212
Query: 546 FLCVFTACSHWGLVEEGLRYFNSMTKVYK--LVPKREHYASIVDVLCRSGKFDKAEKLIA 603
L V AC+H GL++EG YFN Y + + EHYA +VD+L RSG+F +AE+LI
Sbjct: 213 ILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIK 272
Query: 604 EMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWE 663
MP DP W ++L C+IH N+ LAK AA ++ ++ RD + YV +SN + W+
Sbjct: 273 SMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDP-RDVSSYVMLSNAYSAMENWQ 331
Query: 664 SVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEK 721
+V +++ M+E GL + SW+E++ ++ +F DKN+ E+ + ++S+ +E+
Sbjct: 332 NVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 389
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 53 VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIG 112
V+ L++AR FD N +S +ISGYLK+ + A +F +M ER+ VT+ +IG
Sbjct: 18 VKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIG 77
Query: 113 GYSKSDQFIEAFKLFVRMCRSGTK-PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK-LGH 170
G+S++ + EA FV M R G P+ TF ++ ++ +H+ +K LG
Sbjct: 78 GFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGK 137
Query: 171 DSAVIICNSLIDSYCKMHCVDLASQLYK----EMPQRDSVTYNALIAGYANEGFNKEAIK 226
V + NSLI Y K C ++ L E QR+ V++N++I GYA+ G +EA+
Sbjct: 138 RFNVFVWNSLISFYSK--CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVA 195
Query: 227 LFMEM-RDLGFETSDFTFQAVLYAG-----IGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
+F +M +D ++ T VL+A I + F + ++ Y L +
Sbjct: 196 MFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYA--C 253
Query: 281 LLDFYSKHDCLVEARKLFYKMPELDGVSY 309
++D S+ EA +L MP G+ +
Sbjct: 254 MVDMLSRSGRFKEAEELIKSMPLDPGIGF 282
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 127/288 (44%), Gaps = 48/288 (16%)
Query: 274 NVFVGNALLDFYSKHDCLVEARK-------------------------------LFYKMP 302
NVFVG+A+L+ Y K L +AR+ LF MP
Sbjct: 6 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 65
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKL---QFTKYDRRNFPFATMLSLAANMLDLQM 359
E V++N +I ++ TG +E++N F + + FP A ++ +N+
Sbjct: 66 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCA--ITAISNIASHGA 123
Query: 360 GRQLHSQAIVTTADS-EVLVANALVDMYAKCRRPEEAERIFVKL--SSRCTVPWTAMISA 416
G+ +H+ AI V V N+L+ Y+KC E++ F KL R V W +MI
Sbjct: 124 GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG 183
Query: 417 NVQNGHFEESLKLFSEMRRD-NVTADQATFASVLKASANLASISLG-----KQLHSYIIR 470
NG EE++ +F +M +D N+ + T VL A + I G K ++ Y
Sbjct: 184 YAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDP 243
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
+ YA +VDM ++ G K+A ++ K MP + + W AL+
Sbjct: 244 NLLELEHYA--CMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGG 289
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 32/116 (27%)
Query: 472 GFMSSIYAGSALVDMYAKCGSLKD-------------------------------AIQIF 500
G S+++ GSA+++ Y K +L D A+ +F
Sbjct: 2 GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF 61
Query: 501 KEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ-PDSVSFLCVFTACSH 555
+ MPER+VV+WNA+I ++ G E + F +M+ G P+ +F C TA S+
Sbjct: 62 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 117
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 219/376 (58%), Gaps = 11/376 (2%)
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
A + S A+++ + + RQL + ++ V+ A++ YA+ A +F +
Sbjct: 166 ALLHSYASSVSHITLARQLFDE----MSERNVVSWTAMLSGYARSGDISNAVALFEDMPE 221
Query: 405 RCTVPWTAMISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQ 463
R W A+++A QNG F E++ LF M ++ ++ T VL A A ++ L K
Sbjct: 222 RDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGD 523
+H++ R S ++ ++LVD+Y KCG+L++A +FK ++++ +WN++I+ +A +G
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 524 GEATLKLFEEMVLLGY---QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
E + +FEEM+ L +PD ++F+ + AC+H GLV +G YF+ MT + + P+ E
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
HY ++D+L R+G+FD+A ++++ M DE +W S+LN+C+IH + DLA+ A + L +
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 641 EVLRDAAPYVT-MSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCAND 699
+ YV M+N+ E G WE + +K ++ + K P +S +EI ++VH F + D
Sbjct: 462 N--PNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLD 519
Query: 700 KNHPQMKEIILKIDIL 715
K+HP+ +EI + +D L
Sbjct: 520 KSHPETEEIYMILDSL 535
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 18/245 (7%)
Query: 3 LLHRKIPLKN--LSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSE 60
+++R +P N + L K S P + + +V T +S + + +VQT L
Sbjct: 116 MVNRSVPRPNHFIYPLVLK-STPYLSSAFSTPLVHTHL----FKSGFHLYVVVQTALLHS 170
Query: 61 ----------ARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLL 110
AR+LFD+M RN +S M+SGY + G +S A +F+ M ER+ ++ +
Sbjct: 171 YASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAI 230
Query: 111 IGGYSKSDQFIEAFKLFVRMCRSGT-KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG 169
+ +++ F+EA LF RM + +P+ VT V +LS C ++ +H+ +
Sbjct: 231 LAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD 290
Query: 170 HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM 229
S V + NSL+D Y K ++ AS ++K ++ +N++I +A G ++EAI +F
Sbjct: 291 LSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFE 350
Query: 230 EMRDL 234
EM L
Sbjct: 351 EMMKL 355
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 169/415 (40%), Gaps = 50/415 (12%)
Query: 84 LKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQF--IEAFKLFVRMC-RSGTKPDYV 140
L+ LS A+ IFD N Y ++ YS S AF F M RS +P++
Sbjct: 68 LRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK-MHCVDLASQLYKE 199
+ +L VH+H+ K G V++ +L+ SY + + LA QL+ E
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 200 MPQRDSVTYNALIAGYANEGFNKEAIKLFMEM--RDL----------------------- 234
M +R+ V++ A+++GYA G A+ LF +M RD+
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLF 247
Query: 235 -------GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
++ T VL A + + IH +A + L +VFV N+L+D Y K
Sbjct: 248 RRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGK 307
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFR---KLQFTKYDRRNFPF 344
L EA +F + ++N MI +A G +E+I +F KL + F
Sbjct: 308 CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTT---ADSEVLVANALVDMYAKCRRPEEAERIFVK 401
+L+ + + GR ++T + + L+D+ + R +EA +
Sbjct: 368 IGLLNACTHGGLVSKGRGYFD--LMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMST 425
Query: 402 LSSRC-TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
+ + W ++++A +GH + +E+ N+ A + ANL
Sbjct: 426 MKMKADEAIWGSLLNACKIHGHLD-----LAEVAVKNLVALNPNNGGYVAMMANL 475
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 8/213 (3%)
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNG--HFEESLKLFSEMRRDNVT-ADQATFASVLKA 451
A IF + S T + A+++A + H + F M +V + + VLK+
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 452 SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS-LKDAIQIFKEMPERNVVS 510
+ L+S +H+++ +SGF + +AL+ YA S + A Q+F EM ERNVVS
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 511 WNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMT 570
W A++S YA +GD + LFE+M + D S+ + AC+ GL E + F M
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMP----ERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 571 KVYKLVPKREHYASIVDVLCRSGKFDKAEKLIA 603
+ P ++ ++G A+ + A
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA 284
>AT4G14170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8176709-8178085 REVERSE
Length = 458
Score = 235 bits (600), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 231/418 (55%), Gaps = 4/418 (0%)
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEAR-KLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
T L NV + + L+ YSK + L +F+ MP + S+N++I ++ +G +SI+
Sbjct: 41 TFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSID 100
Query: 328 LFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
LF ++ R + F +L + + + G +H + S + V++ALV MY
Sbjct: 101 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 160
Query: 387 AKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA 446
+ A ++F + R +V +TAM VQ G L +F EM D
Sbjct: 161 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 220
Query: 447 SVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER 506
S+L A L ++ GK +H + IR + G+A+ DMY KC L A +F M R
Sbjct: 221 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 280
Query: 507 NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYF 566
+V+SW++LI Y +GD + KLF+EM+ G +P++V+FL V +AC+H GLVE+ YF
Sbjct: 281 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 340
Query: 567 NSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKN 626
M + Y +VP+ +HYAS+ D + R+G ++AEK + +MP PDE + ++L+ C+++ N
Sbjct: 341 RLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGN 399
Query: 627 QDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYS 684
++ +R A +L ++ R A+ YVT++ + + AG+++ +++ M+E+ ++KVP S
Sbjct: 400 VEVGERVARELIQLKP-RKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 456
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 192/437 (43%), Gaps = 48/437 (10%)
Query: 172 SAVIICNSLIDSYCKM-HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFME 230
S V++ + L+ +Y K+ H + ++ MP R+ ++N +I ++ GF ++I LF+
Sbjct: 45 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 104
Query: 231 M-RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
M R+ DFT +L A + G IH +K ++FV +AL+ Y
Sbjct: 105 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 164
Query: 290 CLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
L+ ARKLF MP D V Y M Y G + +FR++ ++ + + ++L
Sbjct: 165 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 224
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
+ L+ G+ +H I + + + NA+ DMY KC + A +FV +S R +
Sbjct: 225 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 284
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
W+++I +G S KLF EM ++ + + TF VL A A H ++
Sbjct: 285 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA-----------HGGLV 333
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLK 529
++ F+ M E N+V + YAS D +
Sbjct: 334 EKSWL------------------------YFRLMQEYNIV---PELKHYASVADCMSRAG 366
Query: 530 LFEE----MVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR-EHYAS 584
L EE + + +PD V + C +G VE G R + +L P++ +Y +
Sbjct: 367 LLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELI---QLKPRKASYYVT 423
Query: 585 IVDVLCRSGKFDKAEKL 601
+ + +G+FD+AE L
Sbjct: 424 LAGLYSAAGRFDEAESL 440
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 137/286 (47%), Gaps = 2/286 (0%)
Query: 70 YRNTISSNVMISGYLKEGKL-SIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFV 128
Y N + S+ ++ Y K L + +F M RN ++ ++IG +S+S ++ LF+
Sbjct: 44 YSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFL 103
Query: 129 RMCR-SGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
RM R S +PD T +L C+ + K +H +KLG S++ + ++L+ Y M
Sbjct: 104 RMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 163
Query: 188 HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
+ A +L+ +MP RDSV Y A+ GY +G + +F EM GF ++L
Sbjct: 164 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 223
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV 307
A L + G+ +HG+ ++ + +GNA+ D Y K L A +F M D +
Sbjct: 224 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 283
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
S++ +I Y G + S LF ++ + F +LS A+
Sbjct: 284 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 329
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 31/221 (14%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I +K GF S S+ ++ V G+L AR+LFD MP R+++ M GY+++G+
Sbjct: 137 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 196
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+ +F M GY SG D V V+LL
Sbjct: 197 AMLGLAMFREM-------------GY------------------SGFALDSVVMVSLLMA 225
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C +K VH ++ + + N++ D Y K +D A ++ M +RD +++
Sbjct: 226 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 285
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
++LI GY +G + KLF EM G E + TF VL A
Sbjct: 286 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 326
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 272/558 (48%), Gaps = 16/558 (2%)
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
P + L C D + ++H ++VK G D + L+ ++ + + AS +
Sbjct: 26 PQCQKLINDLRSCRDTVEVS---RIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSI 81
Query: 197 YKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
++ + + +N +I GY+ + A +F ++R G F+F L + +
Sbjct: 82 FEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCV 141
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE-LDGVSYNMMITA 315
+ G+ +HG A+++ + + NAL+ FY + +ARK+F +MP+ +D V+++ ++
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNG 201
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
Y +++LFR ++ ++ + LS +++ DL H I D +
Sbjct: 202 YLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLD 261
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
+ + AL+ MY K A RIF + V W MI + G EE + L +M+
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
+ + + +TF +L + A + +G+ + + G+ALVDMYAK G L+
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 496 AIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVL--LGYQPDSVSFLCVFTAC 553
A++IF M +++V SW A+IS Y ++G + LF +M +P+ ++FL V AC
Sbjct: 382 AVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIM 613
SH GLV EG+R F M + Y PK EHY +VD+L R+G+ ++A +LI +P D
Sbjct: 442 SHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTA 501
Query: 614 WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV--GKVKKA 671
W ++L +CR++ N DL + +L M A + ++ A AG E ++ K
Sbjct: 502 WRALLAACRVYGNADLGESVMMRLAEMGETH-PADAILLAGTHAVAGNPEKSLDNELNKG 560
Query: 672 MRERGLTKVPAYSWVEIK 689
+E G YS +EI+
Sbjct: 561 RKEAG------YSAIEIE 572
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 215/451 (47%), Gaps = 8/451 (1%)
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
A IF+ + N + +I GYS SD+ AF +F ++ G D +F+T L C+
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR-DSVTYNA 210
+ +H ++ G + N+LI YC + A +++ EMPQ D+VT++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFST 197
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT 270
L+ GY A+ LF MR + T + L A L D++ + H +K
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG 257
Query: 271 LIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFR 330
L ++ + AL+ Y K + AR++F D V++N MI YA TGL++E + L R
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 331 KLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCR 390
++++ K + F +LS A +GR + + ++ ALVDMYAK
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVG 377
Query: 391 RPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN--VTADQATFASV 448
E+A IF ++ + WTAMIS +G E++ LF++M +N V ++ TF V
Sbjct: 378 LLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVV 437
Query: 449 LKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ER 506
L A ++ + G + ++ + F + +VD+ + G L++A ++ + +P
Sbjct: 438 LNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITS 497
Query: 507 NVVSWNALISA---YASNGDGEATLKLFEEM 534
+ +W AL++A Y + GE+ + EM
Sbjct: 498 DSTAWRALLAACRVYGNADLGESVMMRLAEM 528
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 3/259 (1%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVER-NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
N +I Y GK+S A+++FD M + +AVT++ L+ GY + + A LF M +S
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
+ T ++ LS +D + G H +K+G D + + +LI Y K + A +
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
++ ++D VT+N +I YA G +E + L +M+ + + TF +L + +
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLL-SSCAYSE 342
Query: 256 IAF-GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMIT 314
AF G+ + + + + +G AL+D Y+K L +A ++F +M + D S+ MI+
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 315 AYAWTGLIKESINLFRKLQ 333
Y GL +E++ LF K++
Sbjct: 403 GYGAHGLAREAVTLFNKME 421
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRM- 130
+ I ++ Y K G L A EIF+ M +++ ++T +I GY EA LF +M
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKME 421
Query: 131 ---CRSGTKPDYVTFVTLLSGCNDPKMI-------KGLFQVHSHVVKLGHDSAVIICNSL 180
C+ +P+ +TF+ +L+ C+ ++ K + + +S K+ H V
Sbjct: 422 EENCK--VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCV------ 473
Query: 181 IDSYCKMHCVDLASQLYKEMP-QRDSVTYNALIAG---YANEGFNKEAIKLFMEM 231
+D + ++ A +L + +P DS + AL+A Y N + + EM
Sbjct: 474 VDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEM 528
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/530 (27%), Positives = 285/530 (53%), Gaps = 7/530 (1%)
Query: 171 DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFME 230
D I N + K ++ A L+ EMP+RD V++N +I+G + GF++ I++F +
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 231 MRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLI-WNVFVGNALLDFYSKHD 289
M+ ++FTF ++L + + + G+QIHG A+ + + +N+ V N+++D Y +
Sbjct: 127 MQRWEIRPTEFTF-SILASLVTC--VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLG 183
Query: 290 CLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
A +F M + D VS+N +I + + +G + +++ F ++ + + + ++S
Sbjct: 184 VFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
+ +++ +L G+Q + I S +V A +DM++KC R +++ ++F +L +V
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
+MI + + E++L+LF +V D+ TF+SVL +S N + G +HS +I
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHGADVHSLVI 362
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLK 529
+ GF ++L++MY K GS+ A+ +F + ++++ WN +I A N +L
Sbjct: 363 KLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLA 422
Query: 530 LFEEMVL-LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDV 588
+F ++++ +PD V+ + + AC + G V EG++ F+SM K + + P EHYA I+++
Sbjct: 423 IFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIEL 482
Query: 589 LCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAP 648
LCR G ++A+ + ++PF+P +W IL + + LA+ A+ + E + + P
Sbjct: 483 LCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEP-KSSFP 541
Query: 649 YVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCAN 698
Y+ + I +WE+ K++ AM E L S + I+ V F A+
Sbjct: 542 YLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEAD 591
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 249/506 (49%), Gaps = 10/506 (1%)
Query: 23 PNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISG 82
P + + A++++ GF +T N + ++G + A +LFD +P +NTI+ NV + G
Sbjct: 20 PTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKG 79
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
K G L+ A ++FD M ER+ V++ +I G ++F M R +P TF
Sbjct: 80 LFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF 139
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDS-AVIICNSLIDSYCKMHCVDLASQLYKEMP 201
L S ++ Q+H + + G +++ NS++D Y ++ D A ++ M
Sbjct: 140 SILASLVT---CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
RD V++N LI ++ G + A+ F MR++ + ++T V+ L +++ G+Q
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGL 321
+K + N V A +D +SK + L ++ KLF ++ + D V N MI +Y+W
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 316
Query: 322 IKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN 380
++++ LF L T+ R + F F+++LS + N + L G +HS I D + VA
Sbjct: 317 GEDALRLF-ILAMTQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTAVAT 374
Query: 381 ALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD-NVT 439
+L++MY K + A +F K + + W +I +N ESL +F+++ + ++
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQ 498
D+ T +L A ++ G Q+ S + ++ G + ++++ + G + +A
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 499 IFKEMP-ERNVVSWNALISAYASNGD 523
I ++P E + W ++ A GD
Sbjct: 495 IADKIPFEPSSHIWEPILCASLDLGD 520
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 40/260 (15%)
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
F+ ++ S S +L K +H+ ++ +GF+ + Y G+ + +Y K GS+ +A+Q+F ++P
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 505 ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLR 564
++N ++WN + NG L LF+EM + D VS+ + + G E G+R
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMP----ERDVVSWNTMISGLVSCGFHEYGIR 122
Query: 565 YFNSMTK------------VYKLVPKREH--------------------YASIVDVLCRS 592
F M + + LV H + S++D+ R
Sbjct: 123 VFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRL 182
Query: 593 GKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM 652
G FD A + M D D + W+ ++ SC N+++A + ME+ D T+
Sbjct: 183 GVFDYALSVFLTME-DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDE---YTV 238
Query: 653 SNILAEAGQWESVGKVKKAM 672
S +++ + K K+A+
Sbjct: 239 SMVVSICSDLRELSKGKQAL 258
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 206/366 (56%), Gaps = 10/366 (2%)
Query: 359 MGRQLHSQAI---VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
+G+Q+H + V +DS V ++ +Y + + +A ++F ++ V W +++
Sbjct: 31 VGKQIHCWVVKNGVFLSDSHV--QTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMN 88
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
V+ G E L++F EM + D+ + + L A A + +++ GK +H ++ + ++
Sbjct: 89 GYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 148
Query: 476 S-IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEM 534
S ++ G+ALVDMYAKCG ++ A+++FK++ RNV SW ALI YA+ G + + E +
Sbjct: 149 SDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERL 208
Query: 535 VLL-GYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSG 593
G +PDSV L V AC+H G +EEG +M Y++ PK EHY+ IVD++CR+G
Sbjct: 209 EREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAG 268
Query: 594 KFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME---VLRDAAPYV 650
+ D A LI +MP P +W ++LN CR HKN +L + A + L ++E V + A V
Sbjct: 269 RLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALV 328
Query: 651 TMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIIL 710
+SNI + KV+ + +RG+ K P +S +E+ V F + D +HP + +I
Sbjct: 329 QLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHT 388
Query: 711 KIDILS 716
I +LS
Sbjct: 389 VIHLLS 394
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 137/284 (48%), Gaps = 5/284 (1%)
Query: 239 SDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT-TLIWNVFVGNALLDFYSKHDCLVEARKL 297
S TF ++ A + + G+QIH + VK + + V +L Y + L++ARK+
Sbjct: 12 SYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKV 71
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
F ++P+ D V +++++ Y GL E + +FR++ + F T L+ A + L
Sbjct: 72 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGAL 131
Query: 358 QMGRQLHSQAIVTT-ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA 416
G+ +H + +S+V V ALVDMYAKC E A +F KL+ R W A+I
Sbjct: 132 AQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGG 191
Query: 417 NVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQ-LHSYIIRSGFM 474
G+ ++++ + R D + D VL A A+ + G+ L + R
Sbjct: 192 YAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEIT 251
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVS-WNALISA 517
S +VD+ + G L DA+ + ++MP + + S W AL++
Sbjct: 252 PKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 295
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 22/327 (6%)
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG---HDSAVIICNSLIDSYCKMHCVDLA 193
P Y+TF L+ C Q+H VVK G DS V ++ Y + + A
Sbjct: 11 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQ--TGVLRIYVEDKLLLDA 68
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
+++ E+PQ D V ++ L+ GY G E +++F EM G E +F+ L A +
Sbjct: 69 RKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQV 128
Query: 254 DDIAFGQQIHGYAVKTTLIW-NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
+A G+ IH + K + I +VFVG AL+D Y+K C+ A ++F K+ + S+ +
Sbjct: 129 GALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAAL 188
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGR----QLHSQA 367
I YA G K+++ +L+ + + +L+ A+ L+ GR + ++
Sbjct: 189 IGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARY 248
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMISA-----NVQNG 421
+T + +VD+ + R ++A + K+ + W A+++ NV+ G
Sbjct: 249 EITPKHEHY---SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELG 305
Query: 422 HFEESLKLFSEMRRDNVTADQATFASV 448
E ++K ++ + NV ++A +
Sbjct: 306 --ELAVKNLLDLEKGNVEEEEAALVQL 330
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 45/286 (15%)
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSG-FMSSIYAGSALVDMYAKCGSLK 494
+++ TF ++ A S+GKQ+H +++++G F+S + + ++ +Y + L
Sbjct: 7 EDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLL 66
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
DA ++F E+P+ +VV W+ L++ Y G G L++F EM++ G +PD S TAC+
Sbjct: 67 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 126
Query: 555 HWGLVEEGLRYFNSMTK------------------------------VYKLVPKRE--HY 582
G + +G ++ + K V+K + +R +
Sbjct: 127 QVGALAQG-KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSW 185
Query: 583 ASIVDVLCRSGKFDKA----EKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLF 638
A+++ G KA E+L E PD ++ +L +C + + L
Sbjct: 186 AALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAAC---AHGGFLEEGRSMLE 242
Query: 639 NMEVLRDAAP----YVTMSNILAEAGQWESVGKVKKAMRERGLTKV 680
NME + P Y + +++ AG+ + + + M + L V
Sbjct: 243 NMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASV 288
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 83 YLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
Y+++ L A+++FD + + + V + +L+ GY + E ++F M G +PD +
Sbjct: 59 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 118
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGH-DSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
T L+ C + +H V K +S V + +L+D Y K C++ A +++K++
Sbjct: 119 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 178
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYA 249
+R+ ++ ALI GYA G+ K+A+ + R+ G + VL A
Sbjct: 179 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 227
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 23/221 (10%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNV-----MISGYLKEGKLSI 91
G +P + Q G L++ + + + + ++ I S+V ++ Y K G +
Sbjct: 110 GLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIET 169
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS-GTKPDYVTFVTLLSGC- 149
A E+F + RN ++ LIGGY+ +A R+ R G KPD V + +L+ C
Sbjct: 170 AVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACA 229
Query: 150 ------NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
M++ + + K H S + +D C+ +D A L ++MP +
Sbjct: 230 HGGFLEEGRSMLENMEARYEITPKHEHYSCI------VDLMCRAGRLDDALNLIEKMPMK 283
Query: 204 D-SVTYNALIAG---YANEGFNKEAIKLFMEMRDLGFETSD 240
+ + AL+ G + N + A+K +++ E +
Sbjct: 284 PLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 324
>AT1G09190.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, sperm cell,
embryo, flower, seed; EXPRESSED DURING: petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G56310.1); Has
12606 Blast hits to 4809 proteins in 101 species: Archae
- 0; Bacteria - 0; Metazoa - 13; Fungi - 33; Plants -
12368; Viruses - 0; Other Eukaryotes - 192 (source: NCBI
BLink). | chr1:2966263-2967717 REVERSE
Length = 484
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 218/426 (51%), Gaps = 34/426 (7%)
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
A ++F + + + +N MI Y+ G ES++ F ++ + +A +L ++
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 354 MLDLQMGRQLHSQAIVT-------------------------------TADSEVLVANAL 382
+ DL+ G+ +H + I T ++ V+V N +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
+ + E +F ++S R V W +MIS+ + G E+L+LF EM D+
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSG-FMSSIYAGSALVDMYAKCGSLKDAIQIFK 501
AT +VL SA+L + GK +HS SG F I G+ALVD Y K G L+ A IF+
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 502 EMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLVE 560
+M RNVVSWN LIS A NG GE + LF+ M+ G P+ +FL V CS+ G VE
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 561 EGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
G F M + +KL + EHY ++VD++ RSG+ +A K + MP + + MW S+L++
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 621 CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKV 680
CR H + LA+ AA +L +E ++ YV +SN+ AE G+W+ V KV+ M++ L K
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEP-GNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 681 PAYSWV 686
S +
Sbjct: 474 TGQSTI 479
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 193/410 (47%), Gaps = 53/410 (12%)
Query: 158 LFQVHSHVVK-LGHDSAVI------ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNA 210
L ++H+H+++ H S ++ IC SL +S D A++++ + + + +NA
Sbjct: 20 LPEIHAHLLRHFLHGSNLLLAHFISICGSLSNS-------DYANRVFSHIQNPNVLVFNA 72
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT 270
+I Y+ G E++ F M+ G ++T+ +L + L D+ FG+ +HG ++T
Sbjct: 73 MIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTG 132
Query: 271 L--IWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAY------------ 316
+ + +G +++ Y+ + +A+K+F +M E + V +N+MI +
Sbjct: 133 FHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHL 190
Query: 317 ----------AWTGLI---------KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
+W +I +E++ LF ++ +D T+L ++A++ L
Sbjct: 191 FKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVL 250
Query: 358 QMGRQLHSQAIVTTADSE-VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA 416
G+ +HS A + + + V NALVD Y K E A IF K+ R V W +IS
Sbjct: 251 DTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISG 310
Query: 417 NVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQLHSYII-RSGFM 474
+ NG E + LF M V ++ATF VL + + G++L ++ R
Sbjct: 311 SAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLE 370
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGD 523
+ A+VD+ ++ G + +A + K MP N W +L+SA S+GD
Sbjct: 371 ARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD 420
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 5/279 (1%)
Query: 28 CIDARIVKTGFDPSTSRSNYQIMDLVQTG-QLSEARELFDQMPYRNTISSNVMISGYLKE 86
C+ +++TGF + +++L +G ++ +A+++FD+M RN + N+MI G+
Sbjct: 123 CVHGELIRTGFH-RLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDS 181
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
G + +F M ER+ V++ +I SK + EA +LF M G PD T VT+L
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 147 SGCNDPKMIKGLFQVHSHVVKLG-HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
++ +HS G + + N+L+D YCK ++ A+ ++++M +R+
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLG-FETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
V++N LI+G A G + I LF M + G ++ TF VL + G+++ G
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 265 YAV-KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ + L A++D S+ + EA K MP
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP 400
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 193/350 (55%), Gaps = 5/350 (1%)
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
DR + P ++ A + D +G++LHS A+ + + + +Y K E A +
Sbjct: 116 DRYSLPI--VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARK 173
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
+F + R W A+I G E++++F +M+R + D T SV + L
Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGD 233
Query: 458 ISLGKQLHSYIIRSGF--MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALI 515
+SL QLH ++++ S I ++L+DMY KCG + A IF+EM +RNVVSW+++I
Sbjct: 234 LSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMI 293
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL 575
YA+NG+ L+ F +M G +P+ ++F+ V +AC H GLVEEG YF M ++L
Sbjct: 294 VGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFEL 353
Query: 576 VPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
P HY IVD+L R G+ +A+K++ EMP P+ ++W ++ C + ++A+ A
Sbjct: 354 EPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAP 413
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSW 685
+ +E D YV ++N+ A G W+ V +V+K M+ + + K+PAYS+
Sbjct: 414 YMVELEPWNDGV-YVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 164/342 (47%), Gaps = 6/342 (1%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+N ++ Y +AI++++ M ++ V+ A + + D G+++H AV
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
+ + + F + + Y K ARK+F + PE S+N +I G E++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIV--TTADSEVLVANALVDM 385
+F ++ + + +F ++ + + DL + QLH + T S++++ N+L+DM
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 386 YAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATF 445
Y KC R + A IF ++ R V W++MI NG+ E+L+ F +MR V ++ TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 446 ASVLKASANLASISLGKQLHSYIIRSGF--MSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
VL A + + GK + +++S F + +VD+ ++ G LK+A ++ +EM
Sbjct: 325 VGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 504 PER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSV 544
P + NV+ W L+ GD E + MV L D V
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV 425
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 123/229 (53%), Gaps = 9/229 (3%)
Query: 80 ISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDY 139
I+ Y K G+ A+++FD ER ++ +IGG + + + EA ++FV M RSG +PD
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 140 VTFVTLLSGCNDPKMIKGLFQVHSHVV--KLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
T V++ + C + FQ+H V+ K S +++ NSLID Y K +DLAS ++
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
+EM QR+ V+++++I GYA G EA++ F +MR+ G + TF VL A + +
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 258 FGQQIHGYAVKTTLIWNVFVG----NALLDFYSKHDCLVEARKLFYKMP 302
G+ Y + + G ++D S+ L EA+K+ +MP
Sbjct: 339 EGKT---YFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 129/283 (45%), Gaps = 17/283 (6%)
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
W ++ + +++ ++++++ M R V D+ + V+KA+ + +LGK+LHS +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLK 529
R GF+ + S + +Y K G ++A ++F E PER + SWNA+I G ++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLV--PKREHYA---- 583
+F +M G +PD + + V +C GL + +++K V K E +
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCG-------GLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 584 --SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
S++D+ + G+ D A + EM + + WSS++ + N A Q+
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYS 684
V + +V + + G E GK AM + P S
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEE-GKTYFAMMKSEFELEPGLS 358
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 20/257 (7%)
Query: 104 AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVH- 162
A + ++ Y + + ++A ++++ M RS PD + P +IK Q+H
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSL---------PIVIKAAVQIHD 132
Query: 163 --------SHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAG 214
S V+LG + I YCK + A +++ E P+R ++NA+I G
Sbjct: 133 FTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGG 192
Query: 215 YANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV--KTTLI 272
+ G EA+++F++M+ G E DFT +V + GL D++ Q+H + KT
Sbjct: 193 LNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEK 252
Query: 273 WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
++ + N+L+D Y K + A +F +M + + VS++ MI YA G E++ FR++
Sbjct: 253 SDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Query: 333 QFTKYDRRNFPFATMLS 349
+ F +LS
Sbjct: 313 REFGVRPNKITFVGVLS 329
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTK 136
N +I Y K G++ +A IF+ M +RN V+++ +I GY+ + +EA + F +M G +
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 137 PDYVTFVTLLSGCNDPKMI---KGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLA 193
P+ +TFV +LS C ++ K F + +L + C ++D + + A
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGC--IVDLLSRDGQLKEA 376
Query: 194 SQLYKEMPQRDSV-TYNALIAG 214
++ +EMP + +V + L+ G
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGG 398
>AT3G18840.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6496198-6498940 FORWARD
Length = 698
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 281/558 (50%), Gaps = 77/558 (13%)
Query: 178 NSLIDSYCKMHCVDLASQLYK-EMPQRDSVTYNALIAGYA-NEGFNKEAIKLFMEMR--- 232
N++I +Y K + V A +L++ + +RD +TYN L++G+A +G EAI++F EM
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 233 --DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT--------------------- 269
D+ + DFT ++ L ++ +G+Q+HG VKT
Sbjct: 118 KDDIWID--DFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGK 175
Query: 270 -TLIWNVFVG-----------NALLDFYSKHDCLVEARKLFYKMPEL-DGVSYNMMITAY 316
+ N+F G NA++ Y + + +A +F++ PEL D +S+N +I Y
Sbjct: 176 FKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGY 235
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
A G +E++ + ++ F +L++ +++ L++G+++H++ + + S
Sbjct: 236 AQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNK 295
Query: 377 LVANALVDMYAKCRRPE-------------------------------EAERIFVKLSSR 405
V++ +VD+Y KC + EA+R+F LS +
Sbjct: 296 FVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEK 355
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSE-MRRDNVTADQATFASVLKASANLASISLGKQL 464
V WTAM + + L+L + + T D SVL A + A + GK++
Sbjct: 356 NLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEI 415
Query: 465 HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDG 524
H + +R+G + +A VDMY+KCG+++ A +IF ER+ V +NA+I+ A +G
Sbjct: 416 HGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHE 475
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
+ + FE+M G++PD ++F+ + +AC H GLV EG +YF SM + Y + P+ HY
Sbjct: 476 AKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTC 535
Query: 585 IVDVLCRSGKFDKAEKLIAEM-PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVL 643
++D+ ++ + DKA +L+ + + D ++ + LN+C +KN +L K E+L +E
Sbjct: 536 MIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEG- 594
Query: 644 RDAAPYVTMSNILAEAGQ 661
+ + Y+ ++N A + +
Sbjct: 595 SNGSRYIQIANAYASSAR 612
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 151/583 (25%), Positives = 270/583 (46%), Gaps = 80/583 (13%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSI 91
R +K+G + SN + ++G L EAR +FD+M RN S N +I+ Y+K +
Sbjct: 13 RSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKE 72
Query: 92 AKEIFDS-MVERNAVTYTLLIGGYSKSDQF-IEAFKLFVRMCRSGTKPDYVTFVTLLSGC 149
A+E+F+S ER+ +TY L+ G++K+D EA ++F M R ++ T+ +
Sbjct: 73 ARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMV 132
Query: 150 NDPKMIKGLF---QVHSHVVKLGHD------SAVI-----------ICN----------- 178
+ +F Q+H +VK G+D S++I +CN
Sbjct: 133 KLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVD 192
Query: 179 -----SLIDSYCKMHCVDLASQLYKEMPQ-RDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
++I +YC+ +D A ++ P+ D++++N LIAGYA G+ +EA+K+ + M
Sbjct: 193 SVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME 252
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCL- 291
+ G + + +F AVL L + G+++H +K N FV + ++D Y K +
Sbjct: 253 ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMK 312
Query: 292 -VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ----------FTKY--- 337
E+ L Y L S + MI Y+ G + E+ LF L F Y
Sbjct: 313 YAESAHLLYGFGNL--YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 338 ---------------DRRNFPFATMLSLAANMLDLQM----GRQLHSQAIVTTADSEVLV 378
+ N P + ++ LQ G+++H ++ T + +
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
A VDMY+KC E AERIF R TV + AMI+ +GH +S + F +M
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGF 490
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG--SALVDMYAKCGSLKDA 496
D+ TF ++L A + + G++ +I + + S G + ++D+Y K L A
Sbjct: 491 KPDEITFMALLSACRHRGLVLEGEKYFKSMIEA-YNISPETGHYTCMIDLYGKAYRLDKA 549
Query: 497 IQIFK--EMPERNVVSWNALISAYASNGDGEATLKLFEEMVLL 537
I++ + + E++ V A ++A + N + E ++ E+++++
Sbjct: 550 IELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVI 592
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 198/425 (46%), Gaps = 73/425 (17%)
Query: 274 NVFVGNALLDFYSKHDCLVEARKLFYK-MPELDGVSYNMMITAYAWT-GLIKESINLFRK 331
NV+ NA++ Y K + + EAR+LF E D ++YN +++ +A T G E+I +F +
Sbjct: 53 NVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGE 112
Query: 332 LQFTKYDR---RNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK 388
+ + D +F TM+ L+A + ++ G QLH + T D ++L+ MY+K
Sbjct: 113 MHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSK 172
Query: 389 CRRPEEAERIF--------------VKLSSRC--------------------TVPWTAMI 414
C + +E IF +++ C T+ W +I
Sbjct: 173 CGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLI 232
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM 474
+ QNG+ EE+LK+ M + + D+ +F +VL ++L S+ +GK++H+ ++++G
Sbjct: 233 AGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSY 292
Query: 475 SSIYAGSALVDMYAKCGSLK-------------------------------DAIQIFKEM 503
S+ + S +VD+Y KCG++K +A ++F +
Sbjct: 293 SNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSL 352
Query: 504 PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ-PDSVSFLCVFTACSHWGLVEEG 562
E+N+V W A+ Y + ++ L+L + PDS+ + V ACS +E G
Sbjct: 353 SEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG 412
Query: 563 LRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCR 622
+ L+ K+ + VD+ + G + AE+ I + F+ D +M+++++ C
Sbjct: 413 KEIHGHSLRTGILMDKK-LVTAFVDMYSKCGNVEYAER-IFDSSFERDTVMYNAMIAGCA 470
Query: 623 IHKNQ 627
H ++
Sbjct: 471 HHGHE 475
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 148/311 (47%), Gaps = 23/311 (7%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
+ AR++K G + S+ + + G + A + N S++ MI GY +GK
Sbjct: 282 VHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGK 341
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGY---SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
+ AK +FDS+ E+N V +T + GY + D +E + F+ PD + V++
Sbjct: 342 MVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI--ANETNTPDSLVMVSV 399
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
L C+ ++ ++H H ++ G + + +D Y K V+ A +++ +RD+
Sbjct: 400 LGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDT 459
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA----GIGLD-DIAFGQ 260
V YNA+IAG A+ G ++ + F +M + GF+ + TF A+L A G+ L+ + F
Sbjct: 460 VMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKS 519
Query: 261 QIHGYAVKTTLIWNVFVGN--ALLDFYSKHDCLVEARKLFYKMPEL--DGVSYNMMITAY 316
I Y + G+ ++D Y K L +A +L + ++ D V + A
Sbjct: 520 MIEAYNISPE------TGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNAC 573
Query: 317 AW---TGLIKE 324
+W T L+KE
Sbjct: 574 SWNKNTELVKE 584
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 465 HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDG 524
H I+SG + + + LV++Y+K G L++A +F EM ERNV SWNA+I+AY +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 525 EATLKLFE 532
+ +LFE
Sbjct: 71 KEARELFE 78
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 203/366 (55%), Gaps = 10/366 (2%)
Query: 359 MGRQLHSQAI---VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
+G+Q+H + V +D V ++ +Y + + +A ++F ++ V W +++
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHV--QTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMN 191
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
V+ G E L++F EM + D+ + + L A A + +++ GK +H ++ + ++
Sbjct: 192 GYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 476 S-IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEM 534
S ++ G+ALVDMYAKCG ++ A+++F+++ RNV SW ALI YA+ G + + +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRI 311
Query: 535 VLL-GYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSG 593
G +PDSV L V AC+H G +EEG +M Y + PK EHY+ IVD++CR+G
Sbjct: 312 EREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAG 371
Query: 594 KFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME---VLRDAAPYV 650
+ D A LI +MP P +W ++LN CR HKN +L + A + L ++E V + A V
Sbjct: 372 RLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALV 431
Query: 651 TMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIIL 710
+SNI + KV+ + +RG+ K P +S +E+ V F + D +HP + +I
Sbjct: 432 QLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHT 491
Query: 711 KIDILS 716
I +LS
Sbjct: 492 LIHLLS 497
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 175/391 (44%), Gaps = 19/391 (4%)
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL------ASQLYKEMPQ 202
CN K IK HS + G + L+ ++ +H +L AS ++ +
Sbjct: 21 CNTVKQIK---STHSLFIIHGLHRNTYAISKLLTAF--LHLPNLNKHFHYASSIFDSIEI 75
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEM---RDLGFETSDFTFQAVLYAGIGLDDIAFG 259
+S Y+ +I + ++ F+ M + S TF ++ A + + G
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG 135
Query: 260 QQIHGYAVKT-TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
+QIH + VK + + V +L Y + L +ARK+F ++P+ D V +++++ Y
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT-ADSEVL 377
GL E + +F+++ + F T L+ A + L G+ +H +S+V
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM-RRD 436
V ALVDMYAKC E A +F KL+ R W A+I G+ +++ + R D
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315
Query: 437 NVTADQATFASVLKASANLASISLGK-QLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
+ D VL A A+ + G+ L + R G S +VD+ + G L D
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDD 375
Query: 496 AIQIFKEMPERNVVS-WNALISAYASNGDGE 525
A+ + ++MP + + S W AL++ ++ + E
Sbjct: 376 ALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 9/273 (3%)
Query: 70 YRNTISSNVMISGYLKEGKLS----IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFK 125
+RNT + + +++ +L L+ A IFDS+ N+ Y +I S+S Q +
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 126 LFVRMCRSGTK---PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLG-HDSAVIICNSLI 181
F+ M + + P Y+TF L+ C Q+H VVK G S + ++
Sbjct: 100 YFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVL 159
Query: 182 DSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
Y + + A +++ E+PQ D V ++ L+ GY G E +++F EM G E +F
Sbjct: 160 RIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEF 219
Query: 242 TFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIW-NVFVGNALLDFYSKHDCLVEARKLFYK 300
+ L A + +A G+ IH + K I +VFVG AL+D Y+K C+ A ++F K
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEK 279
Query: 301 MPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
+ + S+ +I YA G K++ +++
Sbjct: 280 LTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
>AT5G47460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19252463-19254193 REVERSE
Length = 576
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 242/502 (48%), Gaps = 66/502 (13%)
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
++ +Q+HGY K + N + N+L+ FY D L +A K+F +MP+ D +S+N +++
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSG 130
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI-VTTADS 374
Y +G +E I LF +L + F F L+ A + +G +HS+ + +
Sbjct: 131 YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA---------------------- 412
V+V N L+DMY KC ++A +F + + TV W A
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 413 ---------MISANVQNGHFE-------------------------------ESLKLFSE 432
+I A V++G F E+ + F++
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
M V D+ + + VL A A LA + G +H+ + G S + SAL+DMY+KCG
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGY-QPDSVSFLCVFT 551
LK A +F MP +N++ WN +IS YA NGD +KLF ++ + +PD +FL +
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 552 ACSHWGL-VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPD 610
CSH + +E L YF M Y++ P EH S++ + + G+ +A+++I E F D
Sbjct: 431 VCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYD 490
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNM-EVLRDAAPYVTMSNILAEAGQWESVGKVK 669
+ W ++L +C K+ AK A ++ + + +D Y+ MSN+ A +W VG+++
Sbjct: 491 GVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIR 550
Query: 670 KAMRERGLTKVPAYSWVEIKHK 691
K MRE G+ K SW++ + K
Sbjct: 551 KIMRESGVLKEVGSSWIDSRTK 572
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 217/489 (44%), Gaps = 75/489 (15%)
Query: 121 IEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSL 180
I + V + G KPD V LL + + Q+H +V K G S + NSL
Sbjct: 37 IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSL 96
Query: 181 IDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
+ Y ++ A +++ EMP D +++N+L++GY G +E I LF+E+ ++
Sbjct: 97 MRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNE 156
Query: 241 FTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGNALLDFYSKHDCLVEA----- 294
F+F A L A L G IH VK L NV VGN L+D Y K + +A
Sbjct: 157 FSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQ 216
Query: 295 --------------------RKL------FYKMPELDGVSYNMMITAY------------ 316
KL F++MP D V+YN +I A+
Sbjct: 217 HMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQV 276
Query: 317 ----------AW----TGLIK-----ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
+W TG + E+ F K+ + + + +L+ A + +
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISAN 417
G +H+ A DS V+VA+AL+DMY+KC + AE +F + + + W MIS
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 418 VQNGHFEESLKLFSEMRRDN-VTADQATFASVLKASANLA---SISLG---KQLHSYIIR 470
+NG E++KLF++++++ + D+ TF ++L ++ + LG ++ Y I+
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK 456
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGEATLK 529
S+ +L+ + G + A Q+ +E + V+W AL+ A ++ D +A
Sbjct: 457 ----PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKT 512
Query: 530 LFEEMVLLG 538
+ +M+ LG
Sbjct: 513 VAAKMIELG 521
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 175/389 (44%), Gaps = 55/389 (14%)
Query: 9 PLKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM 68
PL +L ++ Y ++ + + K GF +T SN + + L +A ++FD+M
Sbjct: 57 PLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEM 116
Query: 69 PYRNTISSNVMISGYLKEGK----LSIAKEIFDSMVERNAVTYT---------------- 108
P + IS N ++SGY++ G+ + + E+ S V N ++T
Sbjct: 117 PDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGA 176
Query: 109 --------------------LLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
LI Y K +A +F M + D V++ +++
Sbjct: 177 CIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM----EEKDTVSWNAIVAS 232
Query: 149 CN-DPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVT 207
C+ + K+ GL+ H + + N LID++ K + A Q+ +MP +S +
Sbjct: 233 CSRNGKLELGLWFFHQMP-----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSS 287
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
+N ++ GY N + EA + F +M G +++ VL A L + +G IH A
Sbjct: 288 WNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH 347
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
K L V V +AL+D YSK L A +F+ MP + + +N MI+ YA G E+I
Sbjct: 348 KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 328 LFRKLQ---FTKYDRRNFPFATMLSLAAN 353
LF +L+ F K DR F F +L++ ++
Sbjct: 408 LFNQLKQERFLKPDR--FTFLNLLAVCSH 434
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 6/263 (2%)
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
W+ ++ A + G L+ E+ D D + +L+ S N +SL +QLH Y+
Sbjct: 24 WSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLK 529
+ GF+S+ ++L+ Y SL+DA ++F EMP+ +V+SWN+L+S Y +G + +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVL 589
LF E+ P+ SF AC+ L G + + K+ ++D+
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMY 202
Query: 590 CRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPY 649
+ G D A + M + D + W++I+ SC + +L Q+ N D Y
Sbjct: 203 GKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTY 257
Query: 650 VTMSNILAEAGQWESVGKVKKAM 672
+ + ++G + + +V M
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDM 280
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 237/438 (54%), Gaps = 10/438 (2%)
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
F ++L L I G ++H L N+ + + L+ Y+ A ++F +M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 303 ELDG--VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG 360
+ D ++N +I+ YA G ++++ L+ ++ F F +L + +Q+G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQN 420
+H + +V V NALV MYAKC +A +F + + V W +M++ + +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG 480
G E+L +F M ++ + D+ +SVL A + S G+QLH ++IR G +
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
+AL+ +Y+K G L A IF +M ER+ VSWNA+ISA++ N +G LK FE+M +
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAK 388
Query: 541 PDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEK 600
PD ++F+ V + C++ G+VE+G R F+ M+K Y + PK EHYA +V++ R+G ++A
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 601 LIA-EMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEA 659
+I EM + +W ++L +C +H N D+ + AA++LF +E + + + I ++A
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEP-DNEHNFELLIRIYSKA 507
Query: 660 GQWESVGKVKKAMRERGL 677
+ E V +V++ M +RGL
Sbjct: 508 KRAEDVERVRQMMVDRGL 525
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 215/407 (52%), Gaps = 17/407 (4%)
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
T+P+ F +LL C + I +VH + + + I + L+ Y ++A
Sbjct: 90 TEPE--IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAH 147
Query: 195 QLYKEMPQRDS--VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
+++ M +RDS +N+LI+GYA G ++A+ L+ +M + G + FTF VL A G
Sbjct: 148 EVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGG 207
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
+ + G+ IH VK ++V+V NAL+ Y+K +V+AR +F +P D VS+N M
Sbjct: 208 IGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
+T Y GL+ E++++FR + + +++L A +L + GRQLH I
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM 324
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSE 432
+ E+ VANAL+ +Y+K + +A IF ++ R TV W A+ISA+ +N + LK F +
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQ 381
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCG 491
M R N D TF SVL AN + G++L S + + G + + +V++Y + G
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 492 SLKDAIQ-IFKEMP-ERNVVSWNALISAYASNGD---GE-ATLKLFE 532
+++A I +EM E W AL+ A +G+ GE A +LFE
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 187/382 (48%), Gaps = 21/382 (5%)
Query: 69 PY--RNTIS-SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTL--LIGGYSKSDQFIEA 123
PY RN + S+ ++ Y G +A E+FD M +R++ + LI GY++ Q+ +A
Sbjct: 120 PYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDA 179
Query: 124 FKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDS 183
L+ +M G KPD TF +L C ++ +H +VK G V + N+L+
Sbjct: 180 MALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVM 239
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
Y K + A ++ +P +D V++N+++ GY + G EA+ +F M G E
Sbjct: 240 YAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAI 299
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
+VL + G+Q+HG+ ++ + W + V NAL+ YSK L +A +F +M E
Sbjct: 300 SSVLARVLSFKH---GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
D VS+N +I+A++ + F ++ F ++LSL AN ++ G +L
Sbjct: 357 RDTVSWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERL 413
Query: 364 HS-QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK---LSSRCTVPWTAMISANVQ 419
S + D ++ +V++Y + EEA + V+ L + TV W A++ A
Sbjct: 414 FSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTV-WGALLYACYL 472
Query: 420 NGHFE----ESLKLFSEMRRDN 437
+G+ + + +LF E+ DN
Sbjct: 473 HGNTDIGEVAAQRLF-ELEPDN 493
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 227/442 (51%), Gaps = 27/442 (6%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
+QIH + L + + + LL S CL A + ++P YN +I++
Sbjct: 26 KQIHAQIITIGLSHHTYPLSKLLHLSST-VCLSYALSILRQIPNPSVFLYNTLISS---- 80
Query: 320 GLIKESINLFRKLQFTKYD-----RRNF----PFATMLSLAANMLDLQM---GRQLHSQA 367
++ + L F+ YD R NF F A+ D Q GR LH+
Sbjct: 81 -IVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHV 139
Query: 368 I--VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHF-- 423
+ + + + V ALV YA C + EA +F ++ W +++A +
Sbjct: 140 LKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDS 199
Query: 424 -EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
EE L LF M+ V ++ + +++K+ ANL G H Y++++ + + G++
Sbjct: 200 DEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTS 256
Query: 483 LVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
L+D+Y+KCG L A ++F EM +R+V +NA+I A +G G+ ++L++ ++ G PD
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 543 SVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLI 602
S +F+ +ACSH GLV+EGL+ FNSM VY + PK EHY +VD+L RSG+ ++AE+ I
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 603 AEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQW 662
+MP P+ +W S L S + H + + + A + L +E ++ YV +SNI A +W
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLE-FENSGNYVLLSNIYAGVNRW 435
Query: 663 ESVGKVKKAMRERGLTKVPAYS 684
V K ++ M++ + K P S
Sbjct: 436 TDVEKTRELMKDHRVNKSPGIS 457
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 183/414 (44%), Gaps = 42/414 (10%)
Query: 21 SYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMI 80
S N+K I A+I+ G T + +++ L T LS A + Q+P + N +I
Sbjct: 21 SLQNLKQ-IHAQIITIGLSHHTYPLS-KLLHLSSTVCLSYALSILRQIPNPSVFLYNTLI 78
Query: 81 SGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYV 140
S S+V + T T L +S DQ + + FVR P+
Sbjct: 79 S----------------SIVSNHNSTQTHL--AFSLYDQILSSRSNFVR-------PNEF 113
Query: 141 TFVTLLSGCN-DPKMIKGLFQVHSHVVK----LGHDSAVIICNSLIDSYCKMHCVDLASQ 195
T+ +L D + + +H+HV+K + HD + +L+ Y + A
Sbjct: 114 TYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDR--FVQAALVGFYANCGKLREARS 171
Query: 196 LYKEMPQRDSVTYNALIAGYANE---GFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
L++ + + D T+N L+A YAN ++E + LFM M+ ++ + A++ +
Sbjct: 172 LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCAN 228
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
L + G H Y +K L N FVG +L+D YSK CL ARK+F +M + D YN M
Sbjct: 229 LGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAM 288
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL-HSQAIVTT 371
I A G +E I L++ L + F +S ++ + G Q+ +S V
Sbjct: 289 IRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYG 348
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-WTAMISANVQNGHFE 424
+ +V LVD+ + R EEAE K+ + W + + ++ +G FE
Sbjct: 349 IEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFE 402
>AT1G10330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3388747-3390150 FORWARD
Length = 467
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 208/412 (50%), Gaps = 37/412 (8%)
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
YN +I +Y TG K S+ LF + + N F +++ A + + G LH QA+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP------------------- 409
+ V + V Y + E + ++F + + C V
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 410 ------------WTAMISANVQNGHFEESLKLFSEM---RRDNVTADQATFASVLKASAN 454
WT +I+ + G ++L +F EM R +T ++ATF SVL + AN
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 455 L--ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWN 512
I LGKQ+H Y++ + + G+AL+DMY K G L+ A+ IF ++ ++ V +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 513 ALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
A+ISA ASNG + L++FE M P+ ++ L + TAC+ LV+ G++ F+S+
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
YK++P EHY +VD++ R+G A I +PF+PD + ++L +C+IH+N +L
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 633 AAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYS 684
+QL ++ + YV +S A W K++KAM E G+ K+PAYS
Sbjct: 414 VGKQLIGLQP-QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 181/429 (42%), Gaps = 52/429 (12%)
Query: 186 KMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQA 245
++H V L S + YN LI Y G K ++ LF M + ++ TF +
Sbjct: 32 QIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPS 91
Query: 246 VLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLF------- 298
++ A +++G +HG A+K +W+ FV + + FY + L +RK+F
Sbjct: 92 LIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPC 151
Query: 299 ------------------------YKMPELDGVSYNMMITAYAWTGLIKESINLFRKL-- 332
+MP D VS+ +I ++ GL +++ +F ++
Sbjct: 152 VVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ 211
Query: 333 -QFTKYDRRNFPFATMLSLAANM--LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKC 389
+ F ++LS AN +++G+Q+H + + AL+DMY K
Sbjct: 212 NERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKA 271
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
E A IF ++ + W A+ISA NG +++L++F M+ V + T ++L
Sbjct: 272 GDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAIL 331
Query: 450 KASANLASISLGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERN 507
A A + LG QL S I + + +VD+ + G L DA + +P E +
Sbjct: 332 TACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPD 391
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS---FLCVFTAC-SHW------- 556
AL+ A + + E + ++ L+G QP L F A S+W
Sbjct: 392 ASVLGALLGACKIHENTELGNTVGKQ--LIGLQPQHCGQYVALSTFNALDSNWSEAEKMR 449
Query: 557 -GLVEEGLR 564
++E G+R
Sbjct: 450 KAMIEAGIR 458
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 38/301 (12%)
Query: 102 RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL-SGCNDPKMIKGLFQ 160
+ Y LI Y + ++ + LF M S +P+ +TF +L+ + C+ + G+
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV-A 107
Query: 161 VHSHVVKLGH-------------------------------DSAVIICNSLIDSYCKMHC 189
+H +K G + V+ CNSL+D+ +
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM---RDLGFETSDFTFQAV 246
+D A + ++ MP D V++ +I G++ +G + +A+ +F EM ++ TF +V
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 247 LYAGIGLDD--IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL 304
L + D I G+QIHGY + +I +G ALLD Y K L A +F ++ +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLH 364
++N +I+A A G K+++ +F ++ + +L+ A + +G QL
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 365 S 365
S
Sbjct: 348 S 348
>AT2G25580.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G32450.1); Has 7881 Blast hits to 3723
proteins in 97 species: Archae - 0; Bacteria - 6;
Metazoa - 6; Fungi - 16; Plants - 7829; Viruses - 0;
Other Eukaryotes - 24 (source: NCBI BLink). |
chr2:10888102-10889949 FORWARD
Length = 615
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 191/379 (50%), Gaps = 12/379 (3%)
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
N D + + K + K +H I S + + L++MY+ CG +A
Sbjct: 249 NYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEA 308
Query: 497 IQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW 556
+F++M E+N+ +W +I +A NG GE + +F G PD F +F AC
Sbjct: 309 ASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGML 368
Query: 557 GLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
G V+EGL +F SM++ Y + P E Y S+V++ G D+A + + MP +P+ +W +
Sbjct: 369 GDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWET 428
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
++N R+H N +L AE + ++ R E VK + E+
Sbjct: 429 LMNLSRVHGNLELGDYCAEVVEFLDPTR------------LNKQSREGFIPVKASDVEKE 476
Query: 677 LTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTSCALHNED 736
K + +K + F A D N P+ E+ + L M + GYV +T ALH+ D
Sbjct: 477 SLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDID 536
Query: 737 EDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVR 796
++ K L HSER+A A A++++ P V+KNLR C DCH A+K++S IVGRE+ R
Sbjct: 537 QESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITR 596
Query: 797 DSSRFHHFKDGICSCRDYW 815
D RFH K+G C+C+DYW
Sbjct: 597 DIKRFHQMKNGACTCKDYW 615
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 2/171 (1%)
Query: 357 LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISA 416
LQ + +H + + + ++ + L++MY+ C EA +F K+S + W +I
Sbjct: 270 LQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRC 329
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS-GFMS 475
+NG E+++ +FS + + D F + A L + G + R G
Sbjct: 330 FAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAP 389
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGDGE 525
SI +LV+MYA G L +A++ + MP E NV W L++ +G+ E
Sbjct: 390 SIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLE 440
>AT1G77010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28942710-28944797 FORWARD
Length = 695
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 180/674 (26%), Positives = 319/674 (47%), Gaps = 111/674 (16%)
Query: 1 MKLLHRKIPLKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTS-RSNYQIMDLVQTGQLS 59
M++ R+ ++ L S +++N + + ++K GF S +N+ + ++G++
Sbjct: 21 MEVDCRRYYVRLLQSCSSRNRETLWRQ-TNGLLLKKGFLSSIVIVANHLLQMYSRSGKMG 79
Query: 60 EARELFDQMPYRNTISSNVMISGYL-------------------------------KEGK 88
AR LFD+MP RN S N MI GY+ K G+
Sbjct: 80 IARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGE 139
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
LS+A+ +F++M E++ VT L+ GY + EA +LF + S D +T T+L
Sbjct: 140 LSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKA 196
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C + + +K Q+H+ ++ G + + +SL++ Y K + +AS + +++ + D +
Sbjct: 197 CAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSL 256
Query: 209 NALIAGYANEG--------FNK-----------------------EAIKLFMEMRDLGFE 237
+ALI+GYAN G F++ EA+ LF EMR+ E
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE 316
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
S T AV+ A IGL + G+Q+H +A K LI ++ V + LLD YSK +EA KL
Sbjct: 317 DSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ------------------------ 333
F ++ D + N MI Y G I ++ +F +++
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 334 --FTKYDRRNFP-----FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMY 386
F + + + P ++++S A++ L++G Q+ ++A + DS+ +V+++L+D+Y
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Query: 387 AKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA 446
KC E R+F + VPW +MIS NG E++ LF +M + Q TF
Sbjct: 496 CKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFM 555
Query: 447 SVLKASANLASISLGKQL-HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP- 504
VL A + G++L S + GF+ S +VD+ A+ G +++AI + +EMP
Sbjct: 556 VVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPF 615
Query: 505 ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDS----VSFLCVFTACSHW---G 557
+ + W++++ +NG K E+++ L +P++ V +F W
Sbjct: 616 DVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL--EPENSVAYVQLSAIFATSGDWESSA 673
Query: 558 LVEEGLRYFNSMTK 571
LV + +R N++TK
Sbjct: 674 LVRKLMRE-NNVTK 686
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
Query: 445 FASVLKASANLASISLGKQLHSYIIRSGFMSSIY-AGSALVDMYAKCGSLKDAIQIFKEM 503
+ +L++ ++ +L +Q + +++ GF+SSI + L+ MY++ G + A +F EM
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 504 PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGL 563
P+RN SWN +I Y ++G+ +L+ F+ M + D S+ V + + G +
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMP----ERDGYSWNVVVSGFAKAGELSVAR 144
Query: 564 RYFNSMTKVYKLVPKRE--HYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSC 621
R FN+M P+++ S++ +G ++A +L E+ F D I +++L +C
Sbjct: 145 RLFNAM-------PEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKAC 197
Query: 622 RIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
+ K+ Q+ V D+ ++ N+ A+ G + + +RE
Sbjct: 198 AELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
>AT1G03510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:876258-877547 REVERSE
Length = 429
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 210/422 (49%), Gaps = 45/422 (10%)
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFT---KYDRRNFPFATMLSLAANMLDLQMGRQL 363
+S +++YA G ++++NLF ++ + D F A L A +G +
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLA--LKSCAAAFRPVLGGSV 70
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHF 423
H+ ++ + S V AL+DMY KC A ++F ++ R V W AMIS G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 424 EESLKLFSEMRRDNVTADQATFASVLK--------------------------------- 450
+E+++L+ M +V ++++F +++K
Sbjct: 131 KEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 451 ---ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERN 507
A + + + L K++HSY R+ S LV+ Y +CGS+ +F M +R+
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFN 567
VV+W++LISAYA +GD E+ LK F+EM L PD ++FL V ACSH GL +E L YF
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 568 SMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ 627
M Y L ++HY+ +VDVL R G+F++A K+I MP P W ++L +CR +
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 628 DLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVE 687
+LA+ AA +L +E + A YV + I G+ E +++ M+E G+ P SW
Sbjct: 368 ELAEIAARELLMVEP-ENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCL 426
Query: 688 IK 689
K
Sbjct: 427 FK 428
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 160/353 (45%), Gaps = 42/353 (11%)
Query: 212 IAGYANEGFNKEAIKLFMEMRD-LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT 270
++ YAN+G +++A+ LF++M F L + G +H ++VK+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 271 LIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL-- 328
+ N FVG ALLD Y K + ARKLF ++P+ + V +N MI+ Y G +KE++ L
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 329 -------------------------------FRKLQFTKYDRRNFPFATMLSLAANMLDL 357
+RK+ ++ ++S + +
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISAN 417
++ +++HS A + + + LV+ Y +C + +F + R V W+++ISA
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 418 VQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS----GF 473
+G E +LK F EM VT D F +VLKA ++ L + Y R G
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSH---AGLADEALVYFKRMQGDYGL 315
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV-SWNALISAYASNGDGE 525
+S S LVD+ ++ G ++A ++ + MPE+ +W AL+ A + G+ E
Sbjct: 316 RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE 368
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 130/272 (47%), Gaps = 19/272 (6%)
Query: 58 LSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM-VERNAVTYTLLIGGY-S 115
+S AR+LFD++P RN + N MIS Y GK+ A E++++M V N ++ +I G
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVG 158
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVI 175
D A + + +M KP+ +T + L+S C+ + + ++HS+ + +
Sbjct: 159 TEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ 218
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
+ + L+++Y + + ++ M RD V +++LI+ YA G + A+K F EM
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAK 278
Query: 236 FETSDFTFQAVL----YAGIGLDDIAFGQQIHG-YAVKTTLIWNVFVGNALLDFYSKHDC 290
D F VL +AG+ + + + +++ G Y ++ + + L+D S+
Sbjct: 279 VTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHY----SCLVDVLSRVGR 334
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
EA K+ MPE TA W L+
Sbjct: 335 FEEAYKVIQAMPEKP--------TAKTWGALL 358
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 159/365 (43%), Gaps = 54/365 (14%)
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKP-DYVTFVTLLSGCNDP--KMIKGLFQV 161
++ T + Y+ +A LF++M S P D F L C ++ G V
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGG--SV 70
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFN 221
H+H VK S + +L+D Y K V A +L+ E+PQR++V +NA+I+ Y + G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFG---------------------- 259
KEA++L+ M + E+S F A++ +G +D ++
Sbjct: 131 KEAVELYEAMDVMPNESS---FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 260 --------------QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELD 305
++IH YA + + + + + L++ Y + +V + +F M + D
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 306 GVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA--ANMLD---LQMG 360
V+++ +I+AYA G + ++ F++++ K + F +L A + D +
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV-PWTAMISANVQ 419
R + + D + LVD+ ++ R EEA ++ + + T W A++ A
Sbjct: 308 RMQGDYGLRASKDH----YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRN 363
Query: 420 NGHFE 424
G E
Sbjct: 364 YGEIE 368
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 223/447 (49%), Gaps = 50/447 (11%)
Query: 277 VGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTK 336
VG++L+ Y K C+V ARK+F +MPE + ++N MI Y G + LF ++ +
Sbjct: 2 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 61
Query: 337 -----------YDRR-----------NFPF--------ATMLSLAANMLDLQMGRQLHSQ 366
Y +R PF + ML + N ++ R+
Sbjct: 62 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 121
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEES 426
+ V + ++ Y + EA IF ++ +R V W +I+ QNG+ +++
Sbjct: 122 ----IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDA 177
Query: 427 LKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
+ F M+ + D T +S+L A A + +G+++HS I G + + +AL+DM
Sbjct: 178 IDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDM 237
Query: 487 YAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
YAKCG L++A +F+ + R+V N++IS A +G G+ L++F M L +PD ++F
Sbjct: 238 YAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 297
Query: 547 LCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP 606
+ V TAC H G + EGL+ F+ M K + P +H+ ++ +L RSGK +A +L+ EM
Sbjct: 298 IAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 356
Query: 607 FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAP---------YVTMSNILA 657
P++ + ++L +C++H + ++A++ M+++ A ++SN+ A
Sbjct: 357 VKPNDTVLGALLGACKVHMDTEMAEQV------MKIIETAGSITNSYSENHLASISNLYA 410
Query: 658 EAGQWESVGKVKKAMRERGLTKVPAYS 684
+W++ ++ M +RGL K P S
Sbjct: 411 HTERWQTAEALRVEMEKRGLEKSPGLS 437
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 182/396 (45%), Gaps = 46/396 (11%)
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM--- 231
++ +SLI Y K CV A +++ EMP+R+ T+NA+I GY + G A LF E+
Sbjct: 1 MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVC 60
Query: 232 ----------------------RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKT 269
R+L FE F + V + L G ++ ++
Sbjct: 61 RNTVTWIEMIKGYGKRIEIEKAREL-FERMPFELKNVKAWSVML-----GVYVNNRKMED 114
Query: 270 TLIW-------NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
+ N FV + ++ Y + + EAR +FY++ D V +N +I YA G
Sbjct: 115 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 174
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
++I+ F +Q Y+ +++LS A L +GR++HS + V+NAL
Sbjct: 175 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNAL 234
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQ 442
+DMYAKC E A +F +S R +MIS +G +E+L++FS M ++ D+
Sbjct: 235 IDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDE 294
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
TF +VL A + + G ++ S + ++ L+ + + G LK+A ++ KE
Sbjct: 295 ITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE 354
Query: 503 M---PERNVVSWNALISAYASNGD---GEATLKLFE 532
M P V+ AL+ A + D E +K+ E
Sbjct: 355 MHVKPNDTVLG--ALLGACKVHMDTEMAEQVMKIIE 388
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 157/348 (45%), Gaps = 11/348 (3%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM-VERNAVTYTLLIG 112
+ G + AR++FD+MP RN + N MI GY+ G +A +F+ + V RN VT+ +I
Sbjct: 12 KCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIK 71
Query: 113 GYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKM--IKGLFQVHSHVVKLGH 170
GY K + +A +LF RM K V L N+ KM + F+
Sbjct: 72 GYGKRIEIEKARELFERMPFE-LKNVKAWSVMLGVYVNNRKMEDARKFFEDIP------- 123
Query: 171 DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFME 230
+ + + ++ Y ++ V A ++ + RD V +N LIAGYA G++ +AI F
Sbjct: 124 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 183
Query: 231 MRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDC 290
M+ G+E T ++L A + G+++H + N FV NAL+D Y+K
Sbjct: 184 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 243
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
L A +F + N MI+ A G KE++ +F ++ F +L+
Sbjct: 244 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 303
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ L G ++ S+ V L+ + + + +EA R+
Sbjct: 304 CVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRL 351
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 160/361 (44%), Gaps = 47/361 (13%)
Query: 53 VQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIG 112
V ++ +AR+ F+ +P +N ++M+SGY + G + A+ IF + R+ V + LI
Sbjct: 107 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIA 166
Query: 113 GYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDS 172
GY+++ +A F M G +PD VT ++LS C + +VHS + G +
Sbjct: 167 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL 226
Query: 173 AVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
+ N+LID Y K ++ A+ +++ + R N++I+ A G KEA+++F M
Sbjct: 227 NQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTME 286
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
L + + TF AVL A +HG L+
Sbjct: 287 SLDLKPDEITFIAVLTA-----------CVHG------------------------GFLM 311
Query: 293 EARKLFYKMPELDGVS----YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
E K+F +M D + +I +G +KE+ L +++ D +L
Sbjct: 312 EGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDT---VLGALL 368
Query: 349 SLAANMLDLQMGRQ----LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
+D +M Q + + +T + SE +A ++ ++YA R + AE + V++
Sbjct: 369 GACKVHMDTEMAEQVMKIIETAGSITNSYSENHLA-SISNLYAHTERWQTAEALRVEMEK 427
Query: 405 R 405
R
Sbjct: 428 R 428
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 71/310 (22%)
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
+V ++L+ MY KC A ++F ++ R W AMI + NG + LF E+
Sbjct: 1 MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI--- 57
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGF-MSSIYAGSALVDMYAKCGSLKD 495
+V + T+ ++K I ++L R F + ++ A S ++ +Y ++D
Sbjct: 58 SVCRNTVTWIEMIKGYGKRIEIEKARELFE---RMPFELKNVKAWSVMLGVYVNNRKMED 114
Query: 496 AIQIFKEMPERN-------------------------------VVSWNALISAYASNGDG 524
A + F+++PE+N +V WN LI+ YA NG
Sbjct: 115 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 174
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG-------------LRYF--NSM 569
+ + F M GY+PD+V+ + +AC+ G ++ G L F N++
Sbjct: 175 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNAL 234
Query: 570 TKVYKLVPKREHYASIVDVL-------CRS--------GKFDKAEKLIAEMP---FDPDE 611
+Y E+ S+ + + C S GK +A ++ + M PDE
Sbjct: 235 IDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDE 294
Query: 612 IMWSSILNSC 621
I + ++L +C
Sbjct: 295 ITFIAVLTAC 304
>AT3G26630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9791572-9792939 REVERSE
Length = 455
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 211/386 (54%), Gaps = 37/386 (9%)
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
+QIH +K L + + L+ S A +F ++ ++N+MI + +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 320 GLIKESINLFRKLQFT---KYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
+E++ LF + + ++D+ FPF LA++ +++G Q+H AI ++V
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS--SIRLGTQVHGLAIKAGFFNDV 154
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRC------------------------------ 406
N L+D+Y KC +P+ ++F K+ R
Sbjct: 155 FFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMR 214
Query: 407 -TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
V WTAMI+A V+N +E+ +LF M+ D+V ++ T ++L+AS L S+S+G+ +H
Sbjct: 215 NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVH 274
Query: 466 SYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
Y ++GF+ + G+AL+DMY+KCGSL+DA ++F M +++ +WN++I++ +G GE
Sbjct: 275 DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGE 334
Query: 526 ATLKLFEEMVLLG-YQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
L LFEEM +PD+++F+ V +AC++ G V++GLRYF M +VY + P REH A
Sbjct: 335 EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNAC 394
Query: 585 IVDVLCRSGKFDKAEKLIAEMPFDPD 610
++ +L ++ + +KA L+ M DPD
Sbjct: 395 MIQLLEQALEVEKASNLVESMDSDPD 420
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 157/359 (43%), Gaps = 36/359 (10%)
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
L C++ +K Q+H+ ++K + ++ LI AS ++ ++
Sbjct: 26 FLRTCSNFSQLK---QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPS 82
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIGLDDIAFGQQIH 263
+ T+N +I + +EA+ LF+ M D FTF V+ A + I G Q+H
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP------------------ELD 305
G A+K +VF N L+D Y K RK+F KMP +LD
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 306 G-------------VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
VS+ MITAY E+ LFR++Q F +L +
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ L MGR +H A + + AL+DMY+KC ++A ++F + + W +
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 413 MISANVQNGHFEESLKLFSEMRRD-NVTADQATFASVLKASANLASISLGKQLHSYIIR 470
MI++ +G EE+L LF EM + +V D TF VL A AN ++ G + + +I+
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 38/354 (10%)
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS-GTKPDYVTFVTL 145
G+ A +F+ + + T+ L+I S + + EA LF+ M S ++ D TF +
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHC---------------- 189
+ C I+ QVH +K G + V N+L+D Y K C
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFK--CGKPDSGRKVFDKMPGR 183
Query: 190 -----------------VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
+D A ++ +MP R+ V++ A+I Y EA +LF M+
Sbjct: 184 SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ 243
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
+ ++FT +L A L ++ G+ +H YA K + + F+G AL+D YSK L
Sbjct: 244 VDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQ 303
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLF-RKLQFTKYDRRNFPFATMLSLA 351
+ARK+F M ++N MIT+ G +E+++LF + + F +LS
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVANA-LVDMYAKCRRPEEAERIFVKLSS 404
AN +++ G + ++ I S + NA ++ + + E+A + + S
Sbjct: 364 ANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDS 417
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 27 TCIDARIVKTGFDPSTSRSNYQIMDL-VQTGQLSEARELFDQMPYRNTISSNVMISGYLK 85
T + +K GF N +MDL + G+ R++FD+MP R+ +S M+ G +
Sbjct: 139 TQVHGLAIKAGFFNDVFFQN-TLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVS 197
Query: 86 EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
+L A+ +F+ M RN V++T +I Y K+ + EAF+LF RM KP+ T V L
Sbjct: 198 NSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNL 257
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
L + VH + K G + +LID Y K + A +++ M +
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 206 VTYNALIAGYANEGFNKEAIKLFMEMRDLG-FETSDFTFQAVLYA 249
T+N++I G +EA+ LF EM + E TF VL A
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSA 362
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 266/556 (47%), Gaps = 48/556 (8%)
Query: 160 QVHSHVV--KLGHDSAVIICNSL-IDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYA 216
QVH+ +V + H +++ +L + V ++ K DS ++ L+ +
Sbjct: 290 QVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLS 349
Query: 217 NEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVF 276
KE + ++++M + G S +VL A ++++ G+ IH A+K L V+
Sbjct: 350 QHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVY 409
Query: 277 VGNALLDFYSK--------------------------HDCLV-----EARKLFYKMPELD 305
V L+ YS+ H L EAR++F K+PE D
Sbjct: 410 VQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKD 469
Query: 306 GVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHS 365
VS+N++I++YA G + + +LF + N ++ N ++++ R
Sbjct: 470 AVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI----LIGGYVNCREMKLARTYFD 525
Query: 366 QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEE 425
S + ++ Y K + AE +F +S + + + AMI+ QNG ++
Sbjct: 526 AMPQKNGVSWI----TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKD 581
Query: 426 SLKLFSEM--RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSAL 483
+LKLF++M R + D+ T +SV+ A++ L + S G + SYI G ++L
Sbjct: 582 ALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSL 641
Query: 484 VDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDS 543
+D+Y K G A ++F + +++ VS++A+I NG LF M+ P+
Sbjct: 642 IDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNV 701
Query: 544 VSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIA 603
V+F + +A SH GLV+EG + FNSM K + L P +HY +VD+L R+G+ ++A +LI
Sbjct: 702 VTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 760
Query: 604 EMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVT-MSNILAEAGQW 662
MP P+ +W ++L + +H N + + A +E D Y++ ++ I + G+W
Sbjct: 761 SMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLET--DPTGYLSHLAMIYSSVGRW 818
Query: 663 ESVGKVKKAMRERGLT 678
+ V+ +++E+ L+
Sbjct: 819 DDARTVRDSIKEKKLS 834
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 10/342 (2%)
Query: 56 GQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYS 115
G + A++ FD + +NT+S N ++ GYL+ G+L A+ +FD + E++AV++ L+I Y+
Sbjct: 422 GYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYA 481
Query: 116 KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVI 175
K A LF M + + + C + K+ + F K G +
Sbjct: 482 KKGDMGNACSLFSAMPLK-SPASWNILIGGYVNCREMKLARTYFDAMPQ--KNG-----V 533
Query: 176 ICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM--RD 233
++I Y K+ V A +L++ M ++D + Y+A+IA Y G K+A+KLF +M R+
Sbjct: 534 SWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERN 593
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
+ + T +V+ A L + +FG + Y + + + + +L+D Y K +
Sbjct: 594 SYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAK 653
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
A K+F + + D VSY+ MI G+ E+ +LF + K F +LS ++
Sbjct: 654 AFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSH 713
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEA 395
+Q G + + + +VDM + R EEA
Sbjct: 714 SGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEA 755
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 202/466 (43%), Gaps = 48/466 (10%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
++ K I ++ ++ L+ S+ +F E +++ M SG P ++L
Sbjct: 323 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 382
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
C + + +H+ +K G V + L+ Y ++ ++LA + + ++ ++++V++
Sbjct: 383 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 442
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI-HGYAV 267
N+L+ GY G EA ++F D E ++ ++ + D+ + +
Sbjct: 443 NSLLHGYLESGELDEARRVF----DKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPL 498
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESIN 327
K+ WN+ +G Y + AR F MP+ +GVS+ MI+ Y G ++ +
Sbjct: 499 KSPASWNILIGG-----YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE 553
Query: 328 LFRKLQFTKYDR-----------RNFPFATMLSLAANMLD---------------LQMGR 361
LFR + +K D+ +N L L A ML+ +
Sbjct: 554 LFRLM--SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 611
Query: 362 QLHSQAIVTTADSEV---------LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
QL + + T +S + L++ +L+D+Y K +A ++F L+ + TV ++A
Sbjct: 612 QLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSA 671
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
MI NG E+ LF+ M + + TF +L A ++ + G + + +
Sbjct: 672 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHN 731
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISA 517
S +VDM + G L++A ++ K MP + N W AL+ A
Sbjct: 732 LEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLA 777
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 14/252 (5%)
Query: 7 KIPLKN-------LSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLS 59
KIP K+ +SS A K N + A +K S + N I V ++
Sbjct: 464 KIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK-----SPASWNILIGGYVNCREMK 518
Query: 60 EARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQ 119
AR FD MP +N +S MISGY K G + A+E+F M +++ + Y +I Y+++ +
Sbjct: 519 LARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGK 578
Query: 120 FIEAFKLFVRMCRSGT--KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+A KLF +M + +PD +T +++S + V S++ + G ++
Sbjct: 579 PKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS 638
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
SLID Y K A +++ + ++D+V+Y+A+I G G EA LF M +
Sbjct: 639 TSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP 698
Query: 238 TSDFTFQAVLYA 249
+ TF +L A
Sbjct: 699 PNVVTFTGLLSA 710
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 137/330 (41%), Gaps = 71/330 (21%)
Query: 357 LQMGRQLHSQAIVTTADS-EVLVANALVDMYAKCRRP--EEAERIFVKLSSRCTVPWTAM 413
L+ +Q+H+Q +V + E ++ + + + R +RI + + W +
Sbjct: 285 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCL 344
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
+ Q+ F+E++ ++ +M + SVL+A + ++ GK +H+ +++G
Sbjct: 345 VRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGL 404
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNAL------------------- 514
+Y + LV +Y++ G ++ A + F ++ E+N VSWN+L
Sbjct: 405 CGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDK 464
Query: 515 ------------ISAYASNGDGEATLKLFEEMVLL----------GY------------- 539
IS+YA GD LF M L GY
Sbjct: 465 IPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYF 524
Query: 540 ----QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKF 595
Q + VS++ + + + G V+ F M+K KLV Y +++ ++GK
Sbjct: 525 DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV-----YDAMIACYTQNGKP 579
Query: 596 DKAEKLIAEMP-----FDPDEIMWSSILNS 620
A KL A+M PDEI SS++++
Sbjct: 580 KDALKLFAQMLERNSYIQPDEITLSSVVSA 609
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 204/375 (54%), Gaps = 21/375 (5%)
Query: 344 FATMLSLA--ANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK 401
FA +S A A+ LD GRQ+H+ ++ + + +LV Y+ + A ++F +
Sbjct: 69 FAIKVSSAQKASSLD---GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDE 125
Query: 402 LSSRCT-VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISL 460
+ V WTAMISA +N + E+++LF M + + D L A A+L ++ +
Sbjct: 126 TPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQM 185
Query: 461 GKQLHSYIIRSG--FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAY 518
G++++S I+ + ++L++MY K G + A ++F E ++V ++ ++I Y
Sbjct: 186 GEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGY 245
Query: 519 ASNGDGEATLKLFEEMVLLGYQ------PDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
A NG + +L+LF++M + P+ V+F+ V ACSH GLVEEG R+F SM
Sbjct: 246 ALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMD 305
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
Y L P+ H+ +VD+ CRSG A + I +MP P+ ++W ++L +C +H N +L +
Sbjct: 306 YNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEE 365
Query: 633 AAEQLFNMEVLRD-AAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHK 691
++F ++ RD YV +SNI A G W+ K++ +R+R ++P SW+E+
Sbjct: 366 VQRRIFELD--RDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIELGSI 420
Query: 692 VHIFCAN-DKNHPQM 705
++ F + D N Q+
Sbjct: 421 INEFVSGPDNNDEQL 435
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 54/381 (14%)
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS-VTYNALIAGYANE 218
Q+H+ V KLG ++ + I SL+ Y + VD A Q++ E P++ + V + A+I+ Y
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 219 GFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT--LIWNVF 276
+ EAI+LF M E L A L + G++I+ ++K L ++
Sbjct: 146 ENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT 205
Query: 277 VGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL---- 332
+ N+LL+ Y K +ARKLF + D +Y MI YA G +ES+ LF+K+
Sbjct: 206 LRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTID 265
Query: 333 --QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN--ALVDMYAK 388
Q T + F +L ++ ++ G++ H ++++ + + A+ +VD++ +
Sbjct: 266 QSQDTVITPNDVTFIGVLMACSHSGLVEEGKR-HFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 389 CRRPEEAERIFVKLSSR-CTVPWTAMISA-----NVQNGHFEESLKLFSEMRRDNVTADQ 442
++A ++ + TV W ++ A NV+ G EE + E+ RD+V
Sbjct: 325 SGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELG--EEVQRRIFELDRDHVG--- 379
Query: 443 ATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKE 502
Y+ +S+IYA + D +K ++D ++ +
Sbjct: 380 -----------------------DYVA----LSNIYASKGMWDEKSK---MRDRVRK-RR 408
Query: 503 MPERNVVSWNALISAYASNGD 523
MP ++ + ++I+ + S D
Sbjct: 409 MPGKSWIELGSIINEFVSGPD 429
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVER-NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKP 137
++ Y G + A+++FD E+ N V +T +I Y++++ +EA +LF RM +
Sbjct: 106 LVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIEL 165
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA--VIICNSLIDSYCKMHCVDLASQ 195
D V LS C D ++ +++S +K A + + NSL++ Y K + A +
Sbjct: 166 DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARK 225
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMR------DLGFETSDFTFQAVLYA 249
L+ E ++D TY ++I GYA G +E+++LF +M+ D +D TF VL A
Sbjct: 226 LFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMA 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 26 KTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLK 85
K +D IV Q+ + + + + R L + RN+ +++ Y+K
Sbjct: 162 KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS-----LLNMYVK 216
Query: 86 EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR------SGTKPDY 139
G+ A+++FD + ++ TYT +I GY+ + Q E+ +LF +M + P+
Sbjct: 217 SGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPND 276
Query: 140 VTFVTLLSGCNDPKMI-KGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
VTF+ +L C+ ++ +G S ++ ++D +C+ + A +
Sbjct: 277 VTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFIN 336
Query: 199 EMP-QRDSVTYNALIAG---YANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYAGIGL 253
+MP + ++V + L+ + N +E + E+ RD D+ + +YA G+
Sbjct: 337 QMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD---HVGDYVALSNIYASKGM 393
Query: 254 DD 255
D
Sbjct: 394 WD 395
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 173/299 (57%), Gaps = 6/299 (2%)
Query: 393 EEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRR-DNVTADQATFASVLKA 451
E+A K+ +R V WT +I + +E++ LFS M D + ++ T ++L A
Sbjct: 40 EKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPA 99
Query: 452 SANLASISLGKQLHSYIIRSGFMS-SIYAGSALVDMYAKCGSLKDAIQIFKEMP--ERNV 508
NL + + +H+Y+ + GF+ I ++L+D YAKCG ++ A + F E+P +N+
Sbjct: 100 VWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNL 159
Query: 509 VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG-LRYFN 567
VSW +ISA+A +G G+ + +F++M LG +P+ V+ + V ACSH GL EE L +FN
Sbjct: 160 VSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFN 219
Query: 568 SMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQ 627
+M YK+ P +HY +VD+L R G+ ++AEK+ E+P + ++W +L +C ++ +
Sbjct: 220 TMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDA 279
Query: 628 DLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWV 686
+LA+R +L +E YV MSNI G++ + +K M RG+ K+P +S V
Sbjct: 280 ELAERVTRKLMELE-RSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 138/267 (51%), Gaps = 7/267 (2%)
Query: 56 GQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYS 115
G + +A ++FD+MP RN ++ NVMI+G G A + M R V++T +I GY+
Sbjct: 6 GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 65
Query: 116 KSDQFIEAFKLFVRMCR-SGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV 174
+ D+ EA LF RM KP+ +T + +L + +K VH++V K G
Sbjct: 66 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 125
Query: 175 I-ICNSLIDSYCKMHCVDLASQLYKEMP--QRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
I + NSLID+Y K C+ A + + E+P +++ V++ +I+ +A G KEA+ +F +M
Sbjct: 126 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 185
Query: 232 RDLGFETSDFTFQAVLYAGI--GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
LG + + T +VL A GL + F + + + + +V L+D +
Sbjct: 186 ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKG 245
Query: 290 CLVEARKLFYKMP-ELDGVSYNMMITA 315
L EA K+ ++P E V + M++ A
Sbjct: 246 RLEEAEKIALEIPIEEKAVVWRMLLGA 272
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 291 LVEARKLFYKMPELDGVSYNMMITAY----------------------AWTGLI------ 322
+++A K+F +MPE + V++N+MIT +WT +I
Sbjct: 8 MIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARV 67
Query: 323 ---KESINLFRKLQFTKYDRRN-FPFATMLSLAANMLDLQMGRQLHSQ-AIVTTADSEVL 377
KE+I LF ++ + N +L N+ DL+M +H+ ++
Sbjct: 68 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 127
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSS--RCTVPWTAMISANVQNGHFEESLKLFSEMRR 435
V N+L+D YAKC + A + F+++ + + V WT MISA +G +E++ +F +M R
Sbjct: 128 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 187
Query: 436 DNVTADQATFASVLKASAN--LASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
+ ++ T SVL A ++ LA + ++ + + LVDM + G L
Sbjct: 188 LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRL 247
Query: 494 KDAIQIFKEMP-ERNVVSWNALISAYASNGDGE----ATLKLFE 532
++A +I E+P E V W L+ A + D E T KL E
Sbjct: 248 EEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 291
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 491 GSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLL-GYQPDSVSFLCV 549
G + A+ ++MP R VVSW +I YA + + LF MV +P+ ++ L +
Sbjct: 37 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAI 96
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA-------SIVDVLCRSGKFDKAEKLI 602
A W L + L+ S V+ V KR S++D + G A K
Sbjct: 97 LPAV--WNLGD--LKMCGS---VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 149
Query: 603 AEMPFDPDEIM-WSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNIL 656
E+P ++ W++++++ IH + K A +ME L VTM ++L
Sbjct: 150 IEIPNGRKNLVSWTTMISAFAIH---GMGKEAVSMFKDMERLGLKPNRVTMISVL 201
>AT5G61800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24830054-24831553 REVERSE
Length = 499
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 185/385 (48%), Gaps = 37/385 (9%)
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAI--------------------VTTADS--- 374
D FPF A DL + + LH QA+ + DS
Sbjct: 114 DFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQ 173
Query: 375 --------EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEES 426
+V+ N L+D K R A +F + R V W ++IS Q H E+
Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREA 233
Query: 427 LKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
+KLF EM + D S L A A GK +H Y R + + LVD
Sbjct: 234 IKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDF 293
Query: 487 YAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
YAKCG + A++IF+ ++ + +WNA+I+ A +G+GE T+ F +MV G +PD V+F
Sbjct: 294 YAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTF 353
Query: 547 LCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP 606
+ V CSH GLV+E F+ M +Y + + +HY + D+L R+G ++A ++I +MP
Sbjct: 354 ISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP 413
Query: 607 FDPDE----IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQW 662
D + WS +L CRIH N ++A++AA ++ + D Y M + A A +W
Sbjct: 414 KDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSP-EDGGVYKVMVEMYANAERW 472
Query: 663 ESVGKVKKAM-RERGLTKVPAYSWV 686
E V KV++ + R++ + K +S V
Sbjct: 473 EEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 13/270 (4%)
Query: 58 LSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKS 117
+ A +LFD+ P R+ ++ NV+I G +K ++ A+E+FDSM R+ V++ LI GY++
Sbjct: 168 IDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQM 227
Query: 118 DQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+ EA KLF M G KPD V V+ LS C + +H + + +
Sbjct: 228 NHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLA 287
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
L+D Y K +D A ++++ + T+NA+I G A G + + F +M G +
Sbjct: 288 TGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK 347
Query: 238 TSDFTFQAVLY--AGIGLDDIA---FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
TF +VL + GL D A F Q Y V + + D + +
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY----GCMADLLGRAGLIE 403
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLI 322
EA ++ +MP+ DG + ++ AW+GL+
Sbjct: 404 EAAEMIEQMPK-DGGNREKLL---AWSGLL 429
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 132/294 (44%), Gaps = 45/294 (15%)
Query: 426 SLKLFSEMRRDNVTADQATFASVLKASA--NLASISLGKQLHSYIIRSGFMSSIYAGSAL 483
S + F EMRR +V D TF V KA A ++L K LH +R G +S ++ + L
Sbjct: 99 SKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTL 158
Query: 484 VDMYAKCGSLKDAIQIFKEMPERNVV-------------------------------SWN 512
+ +Y+ + A+Q+F E P+R+VV SWN
Sbjct: 159 IRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWN 218
Query: 513 ALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKV 572
+LIS YA +KLF+EMV LG +PD+V+ + +AC+ G ++G + + TK
Sbjct: 219 SLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG-KAIHDYTKR 277
Query: 573 YKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKR 632
+L +VD + G D A + I E+ D W++++ +H N +L
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAME-IFELCSDKTLFTWNAMITGLAMHGNGELTVD 336
Query: 633 AAEQLFNMEVLRDAAPYVTM------SNILAEA----GQWESVGKVKKAMRERG 676
++ + + D ++++ S ++ EA Q S+ V + M+ G
Sbjct: 337 YFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYG 390
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 160/384 (41%), Gaps = 56/384 (14%)
Query: 190 VDLASQLYKEMPQRDSVTYNALI-AGYANEGFNKEAIKLFMEMRDLG----FETSDFTFQ 244
V A+ +++ + + +N +I +E + + + F+EMR F T F F+
Sbjct: 64 VSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 245 AVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYS------------------ 286
A G D+ + +H A++ L+ ++F N L+ YS
Sbjct: 124 ACAAKKNG--DLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQR 181
Query: 287 -------------KHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
K +V AR+LF MP D VS+N +I+ YA +E+I LF ++
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 334 FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
N + LS A D Q G+ +H + +A LVD YAKC +
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 394 EAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASA 453
A IF S + W AMI+ +G+ E ++ F +M + D TF SVL +
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 454 NLASISLGKQLHSYIIRSGFMSSIYAGS-------ALVDMYAKCGSLKDAIQIFKEMPE- 505
+ + + L M S+Y + + D+ + G +++A ++ ++MP+
Sbjct: 362 HSGLVDEARNLFDQ------MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKD 415
Query: 506 ----RNVVSWNALISAYASNGDGE 525
+++W+ L+ +G+ E
Sbjct: 416 GGNREKLLAWSGLLGGCRIHGNIE 439
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 39/244 (15%)
Query: 125 KLFVRMCRSGTKPDYVTFVTLLSGC-----NDPKMIKGLFQVHSHVVKLGHDSAVIICNS 179
+ FV M R PD+ TF + C D ++K L H ++ G S + N+
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTL---HCQALRFGLLSDLFTLNT 157
Query: 180 LIDSYCKMHCVDLASQLYKEMPQRDSVTYN------------------------------ 209
LI Y + +D A QL+ E PQRD VTYN
Sbjct: 158 LIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSW 217
Query: 210 -ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
+LI+GYA +EAIKLF EM LG + + + L A D G+ IH Y +
Sbjct: 218 NSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 269 TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINL 328
L + F+ L+DFY+K + A ++F + ++N MIT A G + +++
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDY 337
Query: 329 FRKL 332
FRK+
Sbjct: 338 FRKM 341
>AT1G14470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4954080-4955702 FORWARD
Length = 540
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 251/569 (44%), Gaps = 82/569 (14%)
Query: 48 QIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTY 107
Q + Q Q+ +F+ +P ++ +S ++ + IFDS+ N
Sbjct: 15 QALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVV 74
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVK 167
+ +SK D + +L+ + R G PD +F ++ + LFQ + V K
Sbjct: 75 NSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI---LFQ--ALVEK 129
Query: 168 LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKL 227
LG + N ++D Y K V+ A +++ ++ QR +N +I+GY G +EA KL
Sbjct: 130 LGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKL 189
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
F D+ E D +++ I G+A K
Sbjct: 190 F----DMMPEN---------------DVVSWTVMITGFA--------------------K 210
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
L ARK F +MPE VS+N M++ YA G ++++ LF + + +
Sbjct: 211 VKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIV 270
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS-RC 406
+S + D + R L V AL+DM+AKCR + A RIF +L + R
Sbjct: 271 ISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRN 330
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA-------------------------- 440
V W AMIS + G + +LF M + NV +
Sbjct: 331 LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 441 ------DQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
D+ T SVL A ++A + LG + YI ++ + +L+ MYA+ G+L
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
+A ++F EM ER+VVS+N L +A+A+NGDG TL L +M G +PD V++ V TAC+
Sbjct: 451 EAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN 510
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
GL++EG R F S+ P +HYA
Sbjct: 511 RAGLLKEGQRIFKSIRN-----PLADHYA 534
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 162/321 (50%), Gaps = 33/321 (10%)
Query: 46 NYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAV 105
N I + G EA +LFD MP + +S VMI+G+ K L A++ FD M E++ V
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 106 TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCN---DPKMIK------ 156
++ ++ GY+++ +A +LF M R G +P+ T+V ++S C+ DP + +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 157 -------------GLFQVHSHVV----------KLGHDSAVIICNSLIDSYCKMHCVDLA 193
L +H+ +LG ++ N++I Y ++ + A
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD-FTFQAVLYAGIG 252
QL+ MP+R+ V++N+LIAGYA+ G AI+ F +M D G D T +VL A
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMM 312
+ D+ G I Y K + N +L+ Y++ L EA+++F +M E D VSYN +
Sbjct: 411 MADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
Query: 313 ITAYAWTGLIKESINLFRKLQ 333
TA+A G E++NL K++
Sbjct: 471 FTAFAANGDGVETLNLLSKMK 491
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/547 (22%), Positives = 224/547 (40%), Gaps = 105/547 (19%)
Query: 189 CVDLASQLYKEMPQRDSVTY------NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
C L + Y DSVT+ N++ ++ + ++L+ + G F+
Sbjct: 49 CTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFS 108
Query: 243 FQAVL-YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
F V+ AG FG K + +V N ++D Y KH+ + ARK+F ++
Sbjct: 109 FPVVIKSAG------RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQI 162
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR 361
+ G +N+MI+ Y G +E+ LF +
Sbjct: 163 SQRKGSDWNVMISGYWKWGNKEEACKLFDMM----------------------------- 193
Query: 362 QLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNG 421
+++V+ ++ +AK + E A + F ++ + V W AM+S QNG
Sbjct: 194 ----------PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG 243
Query: 422 HFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGS 481
E++L+LF++M R V ++ T+ V+ A + A SL + L I + + +
Sbjct: 244 FTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKT 303
Query: 482 ALVDMYAKCGSLKDAIQIFKEM-PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
AL+DM+AKC ++ A +IF E+ +RN+V+WNA+IS Y GD + +LF+ M +
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP----K 359
Query: 541 PDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEK 600
+ VS+ + +H G + +F E
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFF--------------------------------ED 387
Query: 601 LIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
+I PDE+ S+L++C + +L + + ++ + + Y ++ + A G
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG 447
Query: 661 QWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQME 720
+V M+ER + V F AN + +++LS +M+
Sbjct: 448 NLWEAKRVFDEMKERDV--------VSYNTLFTAFAANGDG-------VETLNLLS-KMK 491
Query: 721 KEGYVPD 727
EG PD
Sbjct: 492 DEGIEPD 498
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 178/347 (51%), Gaps = 18/347 (5%)
Query: 357 LQMGRQLHS--QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
L++GR +H + + +SE L+ L+ YAK A ++F ++ R +V W AMI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESE-LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 415 SA-----NVQNGHFEESLKLFSEMR--RDNVTADQATFASVLKASANLASISLGKQLHSY 467
+ N + +++ LF V T VL A + + +G +H Y
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 468 IIRSGFMSSI--YAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGE 525
I + GF + + G+ALVDMY+KCG L +A +F+ M +NV +W ++ + A NG G
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
T L M G +P+ ++F + +A H GLVEEG+ F SM + + P EHY I
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 586 VDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME---- 641
VD+L ++G+ +A + I MP PD I+ S+ N+C I+ + + + L +E
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDE 425
Query: 642 --VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWV 686
+ YV +SN+LA G+W V K++K M+ER + P YS+V
Sbjct: 426 KLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 70 YRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGY-SKSDQ----FIEAF 124
Y + + ++ Y K G L A+++FD M ER +VT+ +IGGY S D+ +A
Sbjct: 144 YESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAM 203
Query: 125 KLFVRM--CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGH--DSAVIICNSL 180
LF R C SG +P T V +LS + +++ VH ++ KLG + V I +L
Sbjct: 204 VLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTAL 263
Query: 181 IDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
+D Y K C++ A +++ M ++ T+ ++ G A G E L M + G + ++
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNE 323
Query: 241 FTFQAVL--YAGIGL 253
TF ++L Y IGL
Sbjct: 324 ITFTSLLSAYRHIGL 338
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 11/246 (4%)
Query: 161 VHSHVVKLGH-DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYAN-- 217
VH V KLG + +I +L+ Y K + A +++ EMP+R SVT+NA+I GY +
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 218 EGFNKEAIKLFMEMRDL-----GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLI 272
+ N A K + R G +D T VL A + G +HGY K
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 273 --WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFR 330
+VF+G AL+D YSK CL A +F M + ++ M T A G E+ NL
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLN 312
Query: 331 KLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA-NALVDMYAKC 389
++ + F ++LS ++ ++ G +L + V+ +VD+ K
Sbjct: 313 RMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKA 372
Query: 390 RRPEEA 395
R +EA
Sbjct: 373 GRIQEA 378
>AT2G34370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14510482-14511891 FORWARD
Length = 469
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 174/334 (52%), Gaps = 12/334 (3%)
Query: 482 ALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
+++MY+ C S DA+ +F EMP+RN +W +I A NG+GE + +F + G +P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
D F VF AC G + EGL +F SM + Y +V E Y +++++L G D+A
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 602 IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
+ M +P MW +++N C + +L R AE + ++ R + + + ++A
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKE--SNAGLVAAKAS 325
Query: 662 WESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEK 721
++ K+K+ + + P K ++H F A D +H + + QM
Sbjct: 326 DSAMEKLKELRYCQMIRDDP-------KKRMHEFRAGDTSHLGTVSAFRSLKV---QMLD 375
Query: 722 EGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAA 781
G+VP T +E+ K E L + S +LA A A+I++ P+ V++N+R C D H
Sbjct: 376 IGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNT 435
Query: 782 IKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
K+IS I GR + RD ++H +K+G+CSC+DYW
Sbjct: 436 FKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 341 NFP-FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF 399
+FP + L + L+ R +H +T D+ + +++MY+ CR ++A +F
Sbjct: 111 DFPRLLGLAKLCGEVEALEEARVVHD--CITPLDARSY--HTVIEMYSGCRSTDDALNVF 166
Query: 400 VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
++ R + W MI +NG E ++ +F+ + D+ F +V A ++ I+
Sbjct: 167 NEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDIN 226
Query: 460 LGKQLHSYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNAL--- 514
G + R G + S+ +++M A CG L +A+ + M E +V W L
Sbjct: 227 EGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNL 286
Query: 515 --ISAYASNGDGEATL 528
+ Y GD A L
Sbjct: 287 CWVQGYLELGDRFAEL 302
>AT3G51320.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 12158 Blast hits to 4373
proteins in 95 species: Archae - 0; Bacteria - 0;
Metazoa - 23; Fungi - 18; Plants - 12009; Viruses - 0;
Other Eukaryotes - 108 (source: NCBI BLink). |
chr3:19049853-19051445 REVERSE
Length = 530
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 206/418 (49%), Gaps = 35/418 (8%)
Query: 310 NMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIV 369
N + AY + K+++ + + + ++ F +++S + G+ H QAI
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 370 TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGH------- 422
D + V N+L+ MY C + A+++FV++ R V W ++I+ V+NG
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 423 FEE------------------------SLKLFSEMRRDNVTADQATFASVLKASANLASI 458
F+E S+ LF EM R +++T +L A A +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 459 SLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAY 518
G+ +H+ +IR+ SS+ +AL+DMY KC + A +IF + RN V+WN +I A+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 519 ASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPK 578
+G E L+LFE M+ +PD V+F+ V C+ GLV +G Y++ M +++ P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 579 REHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAE 635
H + ++ +G ++AE+ + +P P+ W+++L+S R N L + A+
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVH 693
L + L + Y + NI + G+WE V +V++ ++ER + ++P V++K VH
Sbjct: 447 SLIETDPL-NYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 187/431 (43%), Gaps = 45/431 (10%)
Query: 151 DPKMIKGLFQVHSHVVKLGH--DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTY 208
D I LFQVH+ ++ G+ DS+ I L+ S + +Y+ + +
Sbjct: 31 DSNSITHLFQVHARLITSGNFWDSSWAI--RLLKSSSRFGDSSYTVSIYRSIGKL--YCA 86
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK 268
N + Y K+A+ + ++ GF +TF +++ + G+ HG A+K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 269 TTLIWNVFVGNALLDFYS-------------------------------KHDCLVEARKL 297
+ V N+L+ Y+ ++ ++ A KL
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
F +MP+ + +S+N+MI+AY SI+LFR++ + +L+ L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISAN 417
+ GR +H+ I T +S V++ AL+DMY KC+ A RIF LS R V W MI A+
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 418 VQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSI 477
+G E L+LF M + D+ TF VL A +S G+ +S ++ +
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 478 YAGS-ALVDMYAKCGSLKDAIQIFKEMPERNV----VSWNALISAYASNGD---GEATLK 529
+ + ++Y+ G ++A + K +P+ +V W L+S+ G+ GE+ K
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 530 LFEEMVLLGYQ 540
E L Y+
Sbjct: 447 SLIETDPLNYK 457
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 135/285 (47%), Gaps = 7/285 (2%)
Query: 28 CIDA------RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMIS 81
C+D+ + +K G D N + G L A++LF ++P R+ +S N +I+
Sbjct: 133 CVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIA 192
Query: 82 GYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVT 141
G ++ G + A ++FD M ++N +++ ++I Y ++ + LF M R+G + + T
Sbjct: 193 GMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNEST 252
Query: 142 FVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
V LL+ C +K VH+ +++ +S+V+I +LID Y K V LA +++ +
Sbjct: 253 LVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS 312
Query: 202 QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
R+ VT+N +I + G + ++LF M + + TF VL ++ GQ
Sbjct: 313 IRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQS 372
Query: 262 IHGYAVKTTLIWNVFVGN-ALLDFYSKHDCLVEARKLFYKMPELD 305
+ V I F + + YS EA + +P+ D
Sbjct: 373 YYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDED 417
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 190/469 (40%), Gaps = 87/469 (18%)
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
S+ +S Y GKL A +F + Y S +A + + R G
Sbjct: 70 SSYTVSIYRSIGKLYCANPVFKA---------------YLVSSSPKQALGFYFDILRFGF 114
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
PD TFV+L+S + H +K G D + + NSL+ Y +DLA +
Sbjct: 115 VPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKK 174
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRD---------------------- 233
L+ E+P+RD V++N++IAG G A KLF EM D
Sbjct: 175 LFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVS 234
Query: 234 ---------LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDF 284
GF+ ++ T +L A + G+ +H ++T L +V + AL+D
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDM 294
Query: 285 YSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPF 344
Y K + AR++F + + V++N+MI A+ G + + LF + F
Sbjct: 295 YGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTF 354
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVAN-----ALVDMYAKCRRPEEAERIF 399
+L A + G+ +S + D + N + ++Y+ PEEA
Sbjct: 355 VGVLCGCARAGLVSQGQSYYSLMV----DEFQIKPNFGHQWCMANLYSSAGFPEEA---- 406
Query: 400 VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
EE+LK + ++VT + +A++L +S + +
Sbjct: 407 ------------------------EEALK---NLPDEDVTPESTKWANLLSSSRFTGNPT 439
Query: 460 LGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV 508
LG+ + +I + ++ Y L+++Y+ G +D ++ + + ER +
Sbjct: 440 LGESIAKSLIETDPLNYKYY-HLLMNIYSVTGRWEDVNRVREMVKERKI 487
>AT1G29710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10387673-10389100 FORWARD
Length = 475
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 212/447 (47%), Gaps = 42/447 (9%)
Query: 376 VLVANALVDMYAKCRRPEEAERIFVK-LSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
L N++V Y P A+ + ++ S C G++ E++++ +
Sbjct: 64 TLTQNSMVGQYKTTVSPSVAQNVTIETFDSLCI------------QGNWREAVEVLDYLE 111
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
D + K ++ + +H II + A +A+++MY+ C S+
Sbjct: 112 NKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVD 171
Query: 495 DAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
DA+++F+EMPE N + ++ + +NG GE + LF G +P+ F VF+ C+
Sbjct: 172 DALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCT 231
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMW 614
G V+EG F +M + Y +VP EHY S+ +L SG D+A + MP +P +W
Sbjct: 232 LTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVW 291
Query: 615 SSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRE 674
+++N R+H + +L R AE + ++ R V+ + ++A K +++
Sbjct: 292 ETLMNLSRVHGDVELGDRCAELVEKLDATR--LDKVSSAGLVAT--------KASDFVKK 341
Query: 675 RGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKIDILSEQMEKEGYVPDTS----- 729
T+ Y + F D +HPQM I + L Q+++ GYVPDT
Sbjct: 342 EPSTRSEPYFY-------STFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSL 394
Query: 730 -CALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKI 788
A+ N+ E + + E +A+ +L+ + S I ++ N+R DCH +K++S I
Sbjct: 395 IMAMENK------EQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVI 448
Query: 789 VGREITVRDSSRFHHFKDGICSCRDYW 815
GR++ RD+ +H FK+G+C C + W
Sbjct: 449 TGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 8/244 (3%)
Query: 299 YKMPELDGVSYNMMITAY---AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
YK V+ N+ I + G +E++ + L+ Y + L
Sbjct: 74 YKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPE 133
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMIS 415
L+ R +H I + +V NA+++MY+ C ++A ++F ++ + M+
Sbjct: 134 ALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMR 193
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGK-QLHSYIIRSGFM 474
V NG+ EE++ LF+ + + + F V + G Q + G +
Sbjct: 194 CFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIV 253
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMP-ERNVVSWNALISAYASNGD---GEATLKL 530
S+ ++ M A G L +A+ + MP E +V W L++ +GD G+ +L
Sbjct: 254 PSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAEL 313
Query: 531 FEEM 534
E++
Sbjct: 314 VEKL 317
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 19/192 (9%)
Query: 72 NTISSNVMISGYLKEGKLSIAK----EIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLF 127
+T++ N M+ Y S+A+ E FDS L I G + EA ++
Sbjct: 63 HTLTQNSMVGQYKTTVSPSVAQNVTIETFDS----------LCIQG-----NWREAVEVL 107
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
+ G D + + L C P+ ++ VH ++ L V N++I+ Y
Sbjct: 108 DYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGC 167
Query: 188 HCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
VD A ++++EMP+ +S T ++ + N G+ +EAI LF ++ G + + F V
Sbjct: 168 CSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVF 227
Query: 248 YAGIGLDDIAFG 259
D+ G
Sbjct: 228 STCTLTGDVKEG 239
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 153/592 (25%), Positives = 252/592 (42%), Gaps = 144/592 (24%)
Query: 49 IMDLVQTGQLSEARELFDQMPYRNTISSNV----MISGYLKEGKLSIAKEIFDSMVERNA 104
I+ + G L AR L D++P R +I+ V ++S Y K G L A+ +F+ M ERN
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNI 108
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRM--------------CRSGTKPDYV---------- 140
VT ++ GY K + EA+ LF M C G D V
Sbjct: 109 VTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 141 -----TFVTLLSGCNDPKMIKGLFQ-------------VHSHVVKLGHDSA--------- 173
T VT L D + K +F + ++ G + A
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE 228
Query: 174 --VIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
V+ S++ YC+ V A +L+ EMP+R+ V++ A+I+G+A +EA+ LF+EM
Sbjct: 229 KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 232 -RDL-GFETSDFTFQAVLYA--GIGLDDIAFGQQIHGYAV-------------------- 267
+D+ + T ++ YA G+G++ G+Q+H +
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 268 --KTTLI----------WNVFVGNALLDFYSKHDCLVEARKLFYKMPEL-DGVSYNMMIT 314
+ LI +++ N +++ Y K+ L A LF ++ L D VS+ MI
Sbjct: 349 YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID 408
Query: 315 AYAWTGLIKESINLFRKLQFTKYDR-------------RNFPFATMLSLAANML------ 355
Y G + + LF+KL +D+ +N FA SL ++M+
Sbjct: 409 GYLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 356 ----------------DLQMGRQLHSQAIVTTA--DSEVLVANALVDMYAKCRRPEEAER 397
+L G+ +H TTA D ++++ N+LV MYAKC E+A
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 398 IFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLAS 457
IF K+ + TV W +MI +G +++L LF EM + TF VL A ++
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 458 ISLGKQL-----HSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP 504
I+ G +L +Y I+ G I +++D+ + G LK+A + +P
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGRAGKLKEAEEFISALP 632
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 3/207 (1%)
Query: 46 NYQIMDLVQTGQLSEARELFDQM-PYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNA 104
N I ++ G L A LF+++ + +S MI GYL+ G +S A +F + +++
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSH 164
VT+T++I G +++ F EA L M R G KP T+ LLS + +H
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCV 491
Query: 165 VVKLG--HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNK 222
+ K +D +I+ NSL+ Y K ++ A +++ +M Q+D+V++N++I G ++ G
Sbjct: 492 IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLAD 551
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYA 249
+A+ LF EM D G + + TF VL A
Sbjct: 552 KALNLFKEMLDSGKKPNSVTFLGVLSA 578
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 196/475 (41%), Gaps = 72/475 (15%)
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLF 228
G + V+ SL+ Y K +D A L++ MP+R+ VT NA++ GY EA LF
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 229 MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKH 288
EM + A+ G D + ++ + + WN V + ++
Sbjct: 132 REMPK-NVVSWTVMLTALCDDGRSEDAVELFDEM---PERNVVSWNTLVTGLI-----RN 182
Query: 289 DCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
+ +A+++F MP D VS+N MI Y ++E+ KL F +N
Sbjct: 183 GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEA-----KLLFGDMSEKN------- 230
Query: 349 SLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE--EAERIFVKLSSRC 406
V T S V Y CR + EA R+F ++ R
Sbjct: 231 --------------------VVTWTSMV---------YGYCRYGDVREAYRLFCEMPERN 261
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRR--DNVTADQATFASVLKASANLAS--ISLGK 462
V WTAMIS N + E+L LF EM++ D V+ + T S+ A L LG+
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 463 QLHSYIIRSGFMSSIYAG---SALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYA 519
QLH+ +I +G+ + + G +LV MYA G + A + E ++ S N +I+ Y
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYL 379
Query: 520 SNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR 579
NGD E LFE + L D VS+ + G V F + +
Sbjct: 380 KNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT--- 433
Query: 580 EHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAK 631
+ ++ L ++ F +A L+++M P +S +L+S N D K
Sbjct: 434 --WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 193/449 (42%), Gaps = 77/449 (17%)
Query: 30 DARIVKTGFDPSTSRS----NYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLK 85
D K FD SR N I ++ + EA+ LF M +N ++ M+ GY +
Sbjct: 184 DMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCR 243
Query: 86 EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR--SGTKPDYVTFV 143
G + A +F M ERN V++T +I G++ ++ + EA LF+ M + P+ T +
Sbjct: 244 YGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLI 303
Query: 144 TLLSGCNDPKM-IKGLF-QVHSHVVKLG-----HD-------------SAVII------- 176
+L C + + L Q+H+ V+ G HD S +I
Sbjct: 304 SLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN 363
Query: 177 -------CNSLIDSYCK----------------MH----------------CVDLASQLY 197
CN +I+ Y K +H V A L+
Sbjct: 364 ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLF 423
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
+++ +D VT+ +I+G EA L +M G + + T+ +L + ++
Sbjct: 424 QKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLD 483
Query: 258 FGQQIHGYAVKTTLIW--NVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITA 315
G+ IH KTT + ++ + N+L+ Y+K + +A ++F KM + D VS+N MI
Sbjct: 484 QGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMG 543
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
+ GL +++NLF+++ + + F +LS ++ + G +L +A+ T +
Sbjct: 544 LSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF-KAMKETYSIQ 602
Query: 376 VLVAN--ALVDMYAKCRRPEEAERIFVKL 402
+ + +++D+ + + +EAE L
Sbjct: 603 PGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 173/410 (42%), Gaps = 93/410 (22%)
Query: 291 LVEARKLFYKMPELDGVS----YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFAT 346
LV AR L K+P+ ++ + +++ YA TG + E+ LF + RN
Sbjct: 58 LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP-----ERN----- 107
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
++ NA++ Y KCRR EA +F ++ +
Sbjct: 108 -----------------------------IVTCNAMLTGYVKCRRMNEAWTLFREMP-KN 137
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTA------------DQATFASVLKASAN 454
V WT M++A +G E++++LF EM NV + D V A +
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS 197
Query: 455 LASISLGKQLHSYIIRSGF---------MS--SIYAGSALVDMYAKCGSLKDAIQIFKEM 503
+S + YI G MS ++ +++V Y + G +++A ++F EM
Sbjct: 198 RDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Query: 504 PERNVVSWNALISAYASNGDGEATLKLFEEMV--LLGYQPDSVSFLCVFTACSHWGL--- 558
PERN+VSW A+IS +A N L LF EM + P+ + + + AC G+
Sbjct: 258 PERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR 317
Query: 559 -VEEGLRYFNSMTKVYKLVPKREHYA-SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSS 616
+ E L + ++ ++ V A S+V + SG A+ L+ E FD
Sbjct: 318 RLGEQL-HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE-SFD-------- 367
Query: 617 ILNSC-----RIHKNQDLAKRAAEQLFN-MEVLRDAAPYVTMSNILAEAG 660
L SC R KN DL + AE LF ++ L D + +M + EAG
Sbjct: 368 -LQSCNIIINRYLKNGDLER--AETLFERVKSLHDKVSWTSMIDGYLEAG 414
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
+ I N ++S Y K G + A EIF MV+++ V++ +I G S +A LF M
Sbjct: 502 DLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMI-KG--LFQV--HSHVVKLGHDSAVIICNSLIDSYCK 186
SG KP+ VTF+ +LS C+ +I +G LF+ ++ ++ G D + S+ID +
Sbjct: 562 DSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI----SMIDLLGR 617
Query: 187 MHCVDLASQLYKEMP-QRDSVTYNALIA--GYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
+ A + +P D Y AL+ G + E I MR L + +
Sbjct: 618 AGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPG 677
Query: 244 QAVL---YAGIGLDDI 256
L YAG+G D+
Sbjct: 678 HVALCNVYAGLGRHDM 693
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/574 (23%), Positives = 242/574 (42%), Gaps = 62/574 (10%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNV-----MISGYLKEG 87
+ G PS + N + LV+ + + E FD + +S +V I+ + K G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC--KGVSPDVYLFTTAINAFCKGG 274
Query: 88 KLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
K+ A ++F M V N VT+ +I G ++ EAF +M G +P +T+
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 144 TLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
L+ G K I + V + K G VI+ N+LIDS+ + ++ A ++ M +
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 204 D----SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY----------- 248
S TYN LI GY G A +L EM +GF + +F +V+
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 249 --------------AGIGLDDIAFGQQIHGYAVKTTLIWNVFVG----------NALLDF 284
G L + G HG K +W F+ NALL
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 285 YSKHDCLVEA----RKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRR 340
+ L EA +++ + +D VSYN +I+ + E+ ++
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 341 NFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFV 400
N+ ++ ++ NM ++ Q +V + ++D K R EE + F
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 401 KLSSRC----TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA 456
++ S+ TV + +I A ++G +L+L +M+ ++ + AT+ S++K + ++
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 457 SISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV----VSWN 512
+ K L + G +++ +AL+D Y K G + + +EM +NV +++
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 513 ALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
+I YA +G+ +L EM G PDS+++
Sbjct: 755 VMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 143/662 (21%), Positives = 260/662 (39%), Gaps = 73/662 (11%)
Query: 52 LVQTGQLSEARELFDQMPYRNTISSNV-MISGYLKEGKLSIAKEI------FDSMVERNA 104
L+ LS AR + ++ I+ NV ++ L++ +++IA + FD + R
Sbjct: 136 LLDANLLSAARVVLIRL-----INGNVPVLPCGLRDSRVAIADAMASLSLCFDEEIRRK- 189
Query: 105 VTYTLLIGGYS---KSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQV 161
LLI Y K D A +F + G P T LL+ + +
Sbjct: 190 -MSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEA 248
Query: 162 HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYAN 217
V K G V + + I+++CK V+ A +L+ +M + + VT+N +I G
Sbjct: 249 FDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
G EA +M + G E + T+ ++ I + K NV V
Sbjct: 308 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 367
Query: 278 GNALLDFYSKHDCL---VEARKLFY-KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
N L+D + + L +E + L K L +YN +I Y G + L +++
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 334 FTKYDRRNFPFATMLSLAANML----------DLQMGRQLHSQAIVTTADS--------- 374
++ F +++ L + L ++ + ++TT S
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 487
Query: 375 ----------------EVLVANALVDMYAKCRRPEEAERIFVKLSSR-CT---VPWTAMI 414
+ +NAL+ + + +EA RI ++ R C V + +I
Sbjct: 488 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM 474
S +E+ EM + + D T++ ++ N+ + Q R+G +
Sbjct: 548 SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML 607
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV----VSWNALISAYASNGDGEATLKL 530
+Y S ++D K ++ + F EM +NV V +N LI AY +G L+L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 531 FEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLC 590
E+M G P+S ++ + S VEE F M ++ L P HY +++D
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYG 726
Query: 591 RSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAA 647
+ G+ K E L+ EM P++I ++ ++ N A R ++ ++ D+
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 786
Query: 648 PY 649
Y
Sbjct: 787 TY 788
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEA----RELFDQMPYRNTISSNVMISGYLKEG 87
+ + GF T SN + L + G+L EA +E+ + + +S N +ISG +
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 88 KLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
KL A D MV+R + TY++LI G ++ EA + + R+G PD T+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 144 TLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
++ GC + + + ++ ++ N LI +YC+ + +A +L ++M +
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 204 ----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL--YAGIG--LDD 255
+S TY +LI G + +EA LF EMR G E + F + A++ Y +G +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 256 IAFGQQIHGYAVKTTLI-WNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYN 310
+++H V I + V +G Y++ + EA +L +M E D ++Y
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGG-----YARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 311 MMITAYAWTGLIKES 325
I Y G + E+
Sbjct: 790 EFIYGYLKQGGVLEA 804
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 35 KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRN----TISSNVMISGYLKEGKLS 90
+ G P + I + + E +E FD+M +N T+ N +I Y + G+LS
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 91 IAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
+A E+ + M + N+ TYT LI G S + EA LF M G +P+ + L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 147 SGCND-PKMIKG---LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
G +M+K L ++HS V H + + +I Y + V AS+L EM +
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNV---HPNKITY-TVMIGGYARDGNVTEASRLLNEMRE 778
Query: 203 R----DSVTYNALIAGYANEGFNKEAIK 226
+ DS+TY I GY +G EA K
Sbjct: 779 KGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 112/274 (40%), Gaps = 8/274 (2%)
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
+T I+A + G EE++KLFS+M V + TF +V+ ++
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGE 525
G ++ S LV + + DA + KEM ++ NV+ +N LI ++ G
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
+++ + MV G S ++ + G + R M + V + + S+
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV-NQGSFTSV 441
Query: 586 VDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV 642
+ +LC FD A + + EM P + +++++ H A Q N
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 643 LRDAAPYVTMSNILAEAGQWESVGKVKKAMRERG 676
+ D + + L EAG+ + +++K + RG
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
>AT1G47580.1 | Symbols: | lipoyltransferase, putative |
chr1:17484753-17486387 FORWARD
Length = 416
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 78/106 (73%)
Query: 710 LKIDILSEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSERLAIAFALISTPEGSPILVM 769
+K+ L +++ GYVP+T LH+ DE+ K ++L +HSERLAIAF +I+TP G+ I VM
Sbjct: 311 VKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVM 370
Query: 770 KNLRACTDCHAAIKVISKIVGREITVRDSSRFHHFKDGICSCRDYW 815
KNLR C DCH IK++S I REI VRD+ RFHHF+DG CSC DYW
Sbjct: 371 KNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 416
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 154/713 (21%), Positives = 290/713 (40%), Gaps = 53/713 (7%)
Query: 13 LSSLAAKNSYPNVKTCID-------ARIVKTGFD-----------PSTSRSNYQIMDLVQ 54
L ++ P+V TCI+ A ++ G+D P+ S I
Sbjct: 121 LGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSA 180
Query: 55 TGQLSEARELFDQMP---YRNTIS-SNVMISGYLKEGKLSIAKEIFDSM----VERNAVT 106
LF QM Y T+ +I G+ KEG++ A + D M ++ + V
Sbjct: 181 VNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVL 240
Query: 107 YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV 166
Y + I + K + A+K F + +G KPD VT+ +++ + ++ H+
Sbjct: 241 YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 167 KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS----VTYNALIAGYANEGFNK 222
K N++I Y D A L + + S + YN ++ G
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 223 EAIKLFMEM-RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNAL 281
EA+K+F EM +D S + + G D AF ++ K L NV N +
Sbjct: 361 EALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF--ELRDSMQKAGLFPNVRTVNIM 418
Query: 282 LDFYSKHDCLVEARKLF----YKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKY 337
+D K L EA +F YK+ D +++ +I G + ++ ++ K+ +
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 338 DRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAER 397
+ + +++ N + G +++ I ++ + N +D K PE+
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 398 IFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASA 453
+F ++ +R VP ++ +I ++ G E+ +LF M+ D + V+
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 454 NLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP----ERNVV 509
++ QL + GF ++ +++D AK L +A +F+E E NVV
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 510 SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM 569
+++LI + G + + EE++ G P+ ++ + A + E L F SM
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 570 TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKN 626
K K P + Y +++ LC+ KF+KA EM P I ++++++ + K
Sbjct: 719 -KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG--LAKA 775
Query: 627 QDLAKRAA--EQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
++A+ A ++ + D+A Y M L+ + + + R RGL
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/615 (22%), Positives = 268/615 (43%), Gaps = 32/615 (5%)
Query: 32 RIVKTGFDPSTSRSNYQIMD-LVQTGQLSEARE---LFDQMPYR-NTISSNVMISGYLKE 86
++ + G +PS ++ ++D L G++++A + L + +R +S N ++ G L
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSV 264
Query: 87 GKLSIAKE----IFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
++ +A + D N VT+ LI G+ K + AF LF M + G +PD + +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
TL+ G M+ ++ S + G V++ +S ID Y K + AS +YK M
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
+ + VTY LI G +G EA ++ ++ G E S T+ +++ ++
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM----PELDGVSYNMMIT 314
G ++ +K +V + L+D SK ++ A + KM L+ V +N +I
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
+ E++ +FR + F T++ ++ L+ L + +
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 375 EVLVANALVDMYAKCRRPEEAERIF-----VKLSSRCTVPWTAMISANVQNGHFEESLKL 429
+ L L+D + K +P ++F K+S+ V +I + E++ K
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV-CNVVIHLLFKCHRIEDASKF 623
Query: 430 FSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAK 489
F+ + + D T+ +++ +L + +++ + + F + + L+ + K
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 490 CGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
+ AI++F M E+ N V++ L+ ++ + D E + KLFEEM G P VS
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 546 FLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
+ + G V+E F+ KL+P YA ++ C+ G+ +A L M
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDA-KLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Query: 606 ---PFDPDEIMWSSI 617
PD+++ ++
Sbjct: 803 LRNGVKPDDLLQRAL 817
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 152/642 (23%), Positives = 278/642 (43%), Gaps = 81/642 (12%)
Query: 11 KNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELF----D 66
K+ S++A ++ +KT G P+ N + L + G+ EA+++F D
Sbjct: 445 KSGDSVSALETFEKMKT--------KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 67 QMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIE 122
++++ N+M+ Y K G++ A ++ M+E + + LI K+D+ E
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 123 AFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLID 182
A+K+F+RM KP VT+ TLL+G I+ ++ +V+ G I N+L D
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Query: 183 SYCKMHCVDLA-SQLYKEMPQ---RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFET 238
CK V LA L+K M D TYN +I G G KEA+ F +M+ L +
Sbjct: 617 CLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-- 674
Query: 239 SDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLF 298
DF L G+ VK +LI + + + +F ++C + LF
Sbjct: 675 PDFVTLCTLLPGV---------------VKASLIEDAY--KIITNFL--YNCADQPANLF 715
Query: 299 YK------MPEL---DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
++ + E + VS++ + A G+ ++ ++ + +Y ++ +
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVA---NGICRDGDSIL--VPIIRYSCKHNNVS---- 766
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP 409
A L + + L Q + T N L+ + E A+ +F+++ S +P
Sbjct: 767 -GARTLFEKFTKDLGVQPKLPT-------YNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 410 ----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
+ ++ A ++G +E +L+ EM A+ T V+ ++ L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 466 SYIIRS-GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE----RNVVSWNALISAYAS 520
++ F + L+D +K G L +A Q+F+ M + N +N LI+ +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 521 NGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE 580
G+ +A LF+ MV G +PD ++ + G V+EGL YF + K L P
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVV 997
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEMP----FDPDEIMWSSIL 618
Y I++ L +S + ++A L EM PD ++S++
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 211/493 (42%), Gaps = 57/493 (11%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPY----RNTISSNVMISGYLKEG 87
R++ GF PS + ++ L + + L +M N + + I + G
Sbjct: 213 RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 88 KLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
K++ A EI M + + VTYT+LI + + A ++F +M KPD VT++
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 144 TLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
TLL +D + + + Q S + K GH V+ L+D+ CK A M +
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 204 DSV----TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL-YAGIGLDDIAF 258
+ TYN LI G +A++LF M LG + + +T+ + Y G D ++
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMIT 314
+ K + N+ NA L +K EA+++FY + ++ D V+YNMM+
Sbjct: 453 LETFEKMKTKG-IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
Y+ G I E+I L S+ + +
Sbjct: 512 CYSKVGEIDEAIKLL-----------------------------------SEMMENGCEP 536
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSR----CTVPWTAMISANVQNGHFEESLKLF 430
+V+V N+L++ K R +EA ++F+++ V + +++ +NG +E+++LF
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
M + + TF ++ ++L ++ ++ G + ++ + ++ K
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 491 GSLKDAIQIFKEM 503
G +K+A+ F +M
Sbjct: 657 GQVKEAMCFFHQM 669
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 131/641 (20%), Positives = 249/641 (38%), Gaps = 44/641 (6%)
Query: 41 STSRSNYQIMDLVQTGQLSEARELFDQMPYRN---------TISSNVMISGYLKEGKLSI 91
+T NY + L G+L E +FD M R TI ++ + G LK+ ++
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 92 AKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
K V NA +Y LI KS EA +++ RM G +P T+ +L+ G
Sbjct: 177 RKMREFGFV-LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVT 207
+ I + + + LG V I + ++ A ++ K M D VT
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
Y LI A ++F +M+ + T+ +L D+ +Q
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM------PELDGVSYNMMITAYAWTGL 321
K + +V L+D K EA M P L +YN +I
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH--TYNTLICGLLRVHR 413
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD----LQMGRQLHSQAIVTTADSEVL 377
+ +++ LF ++ + + + D L+ ++ ++ I ++
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA----PNIV 469
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEM 433
NA + AK R EA++IF L VP + M+ + G +E++KL SEM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
+ D S++ + ++ + ++ + L+ K G +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 494 KDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCV 549
++AI++F+ M ++ N +++N L N + LK+ +M+ +G PD ++ +
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD- 608
G V+E + +F+ M K+ + P +++ + ++ + A K+I ++
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 609 ---PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDA 646
P + W ++ S D A +E+L + RD
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 56/299 (18%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYL--- 84
++ TG P + N+ + ++G++ E EL+ +M NTI+ N++ISG +
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Query: 85 ---------------------------------KEGKLSIAKEIFDSMVE----RNAVTY 107
K G+L AK++F+ M++ N Y
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVV 166
+LI G+ K+ + A LF RM + G +PD T+ L+ C ++ +GL +
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL-HYFKELK 988
Query: 167 KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR-----DSVTYNALIAGYANEGFN 221
+ G + V+ N +I+ K H ++ A L+ EM D TYN+LI G
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
+EA K++ E++ G E + FTF A L G L G+ H YAV T++ F N
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNA-LIRGYSLS----GKPEHAYAVYQTMVTGGFSPNT 1102
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/535 (20%), Positives = 214/535 (40%), Gaps = 67/535 (12%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEG 87
R+ + P+ N + L + G++ EA ELF+ M + NTI+ N + K
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 88 KLSIAKEIFDSMVERNAV----TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
++++A ++ M++ V TY +I G K+ Q EA F +M + PD+VT
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLC 681
Query: 144 TLLSGCNDPKMIKGLFQVHSHVV-KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
TLL G +I+ +++ ++ + A + LI S +D A + +
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVA 741
Query: 203 ----RDSVTYNALIAGYANEGFNKEAIKLFME--MRDLGFETSDFTFQAVLYAGIGLDDI 256
RD + I Y+ + N + E +DLG + T+ ++ + D I
Sbjct: 742 NGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMI 801
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP----ELDGVSYNMM 312
Q + T I +V N LLD Y K + E +L+ +M E + +++N++
Sbjct: 802 EIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIV 861
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD----LQMGRQLHSQAI 368
I+ G + ++++L+ L DR P A + L L +QL +
Sbjct: 862 ISGLVKAGNVDDALDLYYDLM---SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP------------------- 409
+ N L++ + K + A +F ++ P
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 410 --------------------WTAMISANVQNGHFEESLKLFSEMRRD-NVTADQATFASV 448
+ +I+ ++ EE+L LF+EM+ +T D T+ S+
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Query: 449 LKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
+ + ++++ I R+G +++ +AL+ Y+ G + A +++ M
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 121/276 (43%), Gaps = 16/276 (5%)
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS- 471
M+ A +G EE +F M++ + D T+ ++ K+ S+ G + Y +R
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKS----LSVKGGLKQAPYALRKM 179
Query: 472 ---GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP----ERNVVSWNALISAYASNGDG 524
GF+ + Y+ + L+ + K +A+++++ M ++ ++++L+ D
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
++ + L +EM LG +P+ +F G + E M P Y
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD-EGCGPDVVTYTV 298
Query: 585 IVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
++D LC + K D A+++ +M PD + + ++L+ +++ D K+ ++
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
+ D + + + L +AG + MR++G+
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 51/258 (19%)
Query: 39 DPSTSRSNYQIMDLVQTGQLSEARELF-DQMPYRN----TISSNVMISGYLKEGKLSIAK 93
+ +T N I LV+ G + +A +L+ D M R+ + +I G K G+L AK
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 94 EIFDSMVE----RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG- 148
++F+ M++ N Y +LI G+ K+ + A LF RM + G +PD T+ L+
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP------- 201
C ++ +GL + + G + V+ N +I+ K H ++ A L+ EM
Sbjct: 972 CMVGRVDEGL-HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 202 ----------------------------QRDSV-----TYNALIAGYANEGFNKEAIKLF 228
QR + T+NALI GY+ G + A ++
Sbjct: 1031 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1090
Query: 229 MEMRDLGFETSDFTFQAV 246
M GF + T++ +
Sbjct: 1091 QTMVTGGFSPNTGTYEQL 1108
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/506 (22%), Positives = 224/506 (44%), Gaps = 48/506 (9%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMV----ERNAVTYTLLIGGYSKSDQFIEAFKLF 127
N ++ + +++GY ++S A + D M + N VT+ LI G ++ EA L
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
RM G +PD VT+ +++G F + + + + + V+I N++ID CK
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 188 HCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
+D A L+KEM + + VTY++LI+ N G +A +L +M + FTF
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
A++ A + + ++++ VK ++ ++ ++L++ + HD L EA+++F M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 304 ----LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
D V+YN +I + ++E + +FR++ + ++ D M
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQ 419
+++ + + ++ N L+D K
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCK------------------------------- 478
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
NG E+++ +F ++R + T+ +++ + G L + G + A
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMV 535
+ ++ + + GS ++A +FKEM E N +N LI A +GD EA+ +L +EM
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 536 LLGYQPDSVSFLCVFTACSHWGLVEE 561
G+ D+ S + + T H G +++
Sbjct: 599 SCGFAGDA-STIGLVTNMLHDGRLDK 623
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 125/565 (22%), Positives = 231/565 (40%), Gaps = 92/565 (16%)
Query: 35 KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM----PYRNTISSNVMISGYLKEGKLS 90
KT +D S + +L +L +A LF +M P+ + I + ++S K K
Sbjct: 43 KTSYDYREKLSRNGLSEL----KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD 98
Query: 91 IAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
+ + + M + N TY++LI + + Q A + +M + G +P+ VT +LL
Sbjct: 99 VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL 158
Query: 147 SG-CNDPK-------------------------MIKGLFQVHS----------HVVKLGH 170
+G C+ + +I GLF +H+ +V G
Sbjct: 159 NGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF-LHNKASEAMALIDRMVAKGC 217
Query: 171 DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIK 226
++ +++ CK DLA L +M Q + YN +I G +A+
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 227 LFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYS 286
LF EM G + T+ +++ + ++ ++ + +VF +AL+D +
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 287 KHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFAT 346
K LVEA KL+ +M V ++ + ++ LI F +DR
Sbjct: 338 KEGKLVEAEKLYDEM-----VKRSIDPSIVTYSSLIN---------GFCMHDR------- 376
Query: 347 MLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
L A M + + + +V+ N L+ + K +R EE +F ++S R
Sbjct: 377 -LDEAKQMFEFMVSKHCF---------PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 407 ----TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGK 462
TV + +I Q G + + ++F EM D V + T+ ++L +
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 463 QLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAY 518
+ Y+ RS +IY + +++ K G ++D +F + + +VV++N +IS +
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 519 ASNGDGEATLKLFEEMVLLGYQPDS 543
G E LF+EM G P+S
Sbjct: 547 CRKGSKEEADALFKEMKEDGTLPNS 571
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 115/576 (19%), Positives = 236/576 (40%), Gaps = 57/576 (9%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P + F LLS + + + LG + LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 182 DSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA + +M + + VT ++L+ GY + EA+ L +M G++
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
+ TF +++ G +H A + AL+D C
Sbjct: 184 PNTVTFNTLIH----------GLFLHNKASEAM---------ALIDRMVAKGC------- 217
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
P+L V+Y +++ G + NL K++ K + + T++ +
Sbjct: 218 ---QPDL--VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAM 413
L + V+ ++L+ R +A R+ + R P ++A+
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
I A V+ G E+ KL+ EM + ++ T++S++ + KQ+ +++
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLK 529
+ + L+ + K +++ +++F+EM +R N V++N LI GD + +
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVL 589
+F+EMV G P+ +++ + G +E+ + F + + K+ P Y +++ +
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGM 511
Query: 590 CRSGKFDKAEKLIAEMPF---DPDEIMWSSILNS-CRIHKNQDLAKRAAEQLFNM----E 641
C++GK + L + PD + ++++++ CR +K A+ LF
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG-----SKEEADALFKEMKEDG 566
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
L ++ Y T+ G E+ ++ K MR G
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 149/336 (44%), Gaps = 22/336 (6%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIA 92
G P+ + I L G+ S+A L M R + + + +I ++KEGKL A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 93 KEIFDSMVERNA----VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
++++D MV+R+ VTY+ LI G+ D+ EA ++F M PD VT+ TL+ G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----D 204
K ++ +V + + G + N LI + D+A +++KEM +
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
+TYN L+ G G ++A+ +F ++ E + +T+ ++ + G +
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV-----SYNMMITAYAWT 319
+ +V N ++ + + EA LF +M E DG YN +I A
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNTLIRARLRD 584
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
G + S L ++++ + A+ + L NML
Sbjct: 585 GDREASAELIKEMRSCGFAGD----ASTIGLVTNML 616
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 222/533 (41%), Gaps = 86/533 (16%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFD---QMPYRNT-ISSNVMISGYLKE 86
+I+K G++P T + I L G++SEA EL D +M ++ T I+ N +++G
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 87 GKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
GK+S A + D MVE N VTY ++ KS Q A +L +M K D V +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
++ G + F + + + G + +II +LI +C D ++L ++M +
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
R D V ++ALI + EG +EA +L EM + GI D + +
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEM---------------IQRGISPDTVTY 355
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
I G+ + L N +LD C R ++N++I Y
Sbjct: 356 TSLIDGFCKENQLDK----ANHMLDLMVSKGCGPNIR------------TFNILINGYCK 399
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
LI + + LFRK+ + +V ++ +
Sbjct: 400 ANLIDDGLELFRKMSL-------------------------------RGVV----ADTVT 424
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMR 434
N L+ + + + E A+ +F ++ SR P + ++ NG E++L++F ++
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
+ + D + ++ N + + L + G + + ++ K GSL
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 495 DAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDS 543
+A +F++M E N ++N LI A+ GD + KL EE+ G+ D+
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 109/584 (18%), Positives = 240/584 (41%), Gaps = 52/584 (8%)
Query: 67 QMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKL 126
++ YR + S ++ ++ + + +E+ S + ++ L +++ Q+ L
Sbjct: 37 KVSYRERLRSGIV--DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDL 94
Query: 127 FVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
+M G + T +++ C + + F ++KLG++ + ++LI+ C
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154
Query: 187 MHCVDLASQLYKEMPQRDS----VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
V A +L M + +T NAL+ G G +A+ L M + GF+ ++ T
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ VL ++ + +T L + RK+ +
Sbjct: 215 YGPVL-------------KVMCKSGQTALAMELL------------------RKMEERKI 243
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ 362
+LD V Y+++I G + + NLF +++ + + T++ G +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANV 418
L I +V+ +AL+D + K + EAE + ++ R TV +T++I
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 419 QNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIY 478
+ +++ + M + TF ++ I G +L + G ++
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 479 AGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEM 534
+ L+ + + G L+ A ++F+EM R ++VS+ L+ NG+ E L++FE++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 535 VLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGK 594
+ D + + + V++ F S+ + + P + Y ++ LC+ G
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPDVKTYNIMIGGLCKKGS 542
Query: 595 FDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAE 635
+A+ L +M D P+ ++ ++ R H + A ++A+
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILI---RAHLGEGDATKSAK 583
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/576 (21%), Positives = 246/576 (42%), Gaps = 50/576 (8%)
Query: 52 LVQTGQLSEARELFDQMP----YRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNA--- 104
L+ G L EA + F +M + T S N ++ + K GK K F M+ A
Sbjct: 70 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 129
Query: 105 -VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHS 163
TY ++I K A LF M G PD VT+ +++ G +
Sbjct: 130 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189
Query: 164 HVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEG 219
+ + + VI N+LI+ +CK + + + Y+EM + + V+Y+ L+ + EG
Sbjct: 190 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 249
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
++AIK +++MR +G +++T+ +++ A + +++ ++ ++ + WNV
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 309
Query: 280 ALLDFYSKHDCLVEARKLFYKM------PELDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
AL+D + + EA +LF KM P L SYN +I + + ++ L +L+
Sbjct: 310 ALIDGLCDAERMKEAEELFGKMDTAGVIPNL--ASYNALIHGFVKAKNMDRALELLNELK 367
Query: 334 FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
+ T + ++ ++ + + ++ + L+ L+D Y K P
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 427
Query: 394 EAERIFVKLSSR----CTVPWTAMISANVQNGHFEESLKLFSEMRRD-NVTADQATFASV 448
E + ++ V + +I +N +++ F+ + D + A+ A F ++
Sbjct: 428 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 487
Query: 449 LKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE--- 505
+ + L +++ G + A ++L+D K G++ +A+ + +M E
Sbjct: 488 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 547
Query: 506 -RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHW--GLVEEG 562
+++++ +L+ + + EEM+ G PD V LC+ H+ G ++E
Sbjct: 548 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV--LCISVLKKHYELGCIDEA 605
Query: 563 LR---YF-----------NSMTKVY---KLVPKREH 581
+ Y N++ +Y LV REH
Sbjct: 606 VELQSYLMKHQLLTSDNDNALPNIYSDQNLVSSREH 641
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 125/635 (19%), Positives = 260/635 (40%), Gaps = 69/635 (10%)
Query: 137 PDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQL 196
P + F L S D M++ Q S + + CN L+ + K+ D +
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 197 YKEM---PQRDSV-TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL--YAG 250
+K+M R +V TYN +I EG + A LF EM+ G T+ +++ +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 251 IG-LDD-IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-- 306
+G LDD + F +++ + +V NAL++ + K L + FY+ + +G
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEP----DVITYNALINCFCKFGKLPIGLE-FYREMKGNGLK 232
Query: 307 ---VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
VSY+ ++ A+ G+++++I + ++ + + +++ + +L +L
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQ 419
++ + + V+ AL+D R +EAE +F K+ + +P + A+I V+
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
+ + +L+L +E++ + D + + + +L I A
Sbjct: 353 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE-------------------A 393
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
+++ +CG + N + + L+ AY +G+ L L +EM L
Sbjct: 394 AKVVMNEMKECGI------------KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 441
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
+ V+F + LV + + YFN ++ + L + +++D LC+ + + A
Sbjct: 442 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAAT 501
Query: 600 KLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNIL 656
L +M PD ++S+++ N A +++ + + D Y ++ L
Sbjct: 502 TLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGL 561
Query: 657 AEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCAND-KNHPQMKEIILKIDIL 715
+ Q + + M G+ H + C + K H ++ I +++
Sbjct: 562 SHCNQLQKARSFLEEMIGEGI------------HPDEVLCISVLKKHYELGCIDEAVELQ 609
Query: 716 SEQMEKEGYVPDTSCALHNEDEDIKVESLKYHSER 750
S M+ + D AL N D + S + H E+
Sbjct: 610 SYLMKHQLLTSDNDNALPNIYSDQNLVSSREHEEQ 644
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 225/509 (44%), Gaps = 55/509 (10%)
Query: 57 QLSEARELFDQM------PYRNTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVT 106
QLS A + +M P T+SS +++GY ++S A + D MVE + T
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSS--LLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 107 YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVV 166
+T LI G ++ EA L +M + G +PD VT+ T+++G I + +
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 167 KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNK 222
K ++ V+I N++ID CK +D A L+ EM + D TY++LI+ N G
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALL 282
+A +L +M + + TF A++ A + + ++++ +K ++ ++F ++L+
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 283 DFYSKHDCLVEARKLFYKMPELDG----VSYNMMITAYAWTGLIKESINLFRKLQFTKYD 338
+ + HD L EA+ +F M D V+Y+ +I + ++E + LFR++
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ T++ D + + Q + +L N L+D K
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK---------- 480
Query: 399 FVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASI 458
NG +++ +F ++R + D T+ +++ +
Sbjct: 481 ---------------------NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 459 SLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM----PERNVVSWNAL 514
G +L + G ++ A + ++ + + GS ++A + K+M P N ++N L
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 515 ISAYASNGDGEATLKLFEEMVLLGYQPDS 543
I A +GD EA+ +L +EM G+ D+
Sbjct: 580 IRARLRDGDREASAELIKEMRSCGFAGDA 608
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 150/695 (21%), Positives = 284/695 (40%), Gaps = 65/695 (9%)
Query: 40 PSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEI 95
P+ + I + ++ E ELF +M R NT++ +I G+ + A+ +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 96 FDSMV----ERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
F MV N +TY +L+ G K+ + +A +F + RS +PD T+ ++ G
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 152 PKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM----PQRDSVT 207
++ +++ ++ G VI N++I +C+ + A L K+M P +S T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
YN LI +G + + +L EMR GF T IGL F ++I
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDAST--------IGLSS-KFKREIEK-PN 625
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL--DGVSYNMMITAYAWTGLIKES 325
+ N+ +S+ C E+ Y E+ G+S + A G++ +S
Sbjct: 626 RENACKNII--------FSEEICSSESCGESYDYREVLRTGLSDIELDDAIGLFGVMAQS 677
Query: 326 INLFRKLQFTKYDRRNFP----FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
R FP F+ +LS A M + + + + N
Sbjct: 678 --------------RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 723
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDN 437
L++ + +C R A + K+ P ++++ +++ L +M
Sbjct: 724 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 783
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
D TF +++ S L +++ G + A+V+ K G A+
Sbjct: 784 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 843
Query: 498 QIFKEMP----ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+ +M E NVV ++ +I + + L LF EM G +P+ +++ + +
Sbjct: 844 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 903
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPD 610
++G + R + M + K+ P +++++D + GK KAEKL EM DP+
Sbjct: 904 CNYGRWSDASRLLSDMIE-RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 962
Query: 611 EIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKK 670
+SS++N + AK+ E + + L + Y T+ N +A + + ++ +
Sbjct: 963 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 1022
Query: 671 AMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQM 705
M +RGL ++ + H F A D ++ QM
Sbjct: 1023 EMSQRGLVG-NTVTYTTLIH--GFFQARDCDNAQM 1054
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 158/770 (20%), Positives = 307/770 (39%), Gaps = 110/770 (14%)
Query: 13 LSSLAAKNSYPNVKTCIDA-----RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQ 67
LSSL N Y + K DA ++V+ G+ P T I L + SEA L DQ
Sbjct: 156 LSSLL--NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 68 MPYR----NTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQ 119
M R + ++ +++G K G + +A + M +E + V Y +I G K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 120 FIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNS 179
+A LF M G +PD T+ +L+S + ++ S +++ + V+ ++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 180 LIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
LID++ K + A +LY EM +R D TY++LI G+ EA +F M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 236 FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALL-DFYSKHDCLVEA 294
+ T+ ++ + G ++ + L+ N L+ F+ DC A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC-DNA 452
Query: 295 RKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
+ +F +M + + ++YN+++ G + +++ +F LQ + + + + M+
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP- 409
++ G +L + V+ N ++ + + EEA+ + K+ +P
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 410 ---WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA-------------------S 447
+ +I A +++G E S +L EMR D +T +
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLSSKFKREIEKPNRENACKN 632
Query: 448 VLKASANLASISLGKQL-HSYIIRSGF--------------------MSSIYAGSALVDM 486
++ + +S S G+ + ++R+G SI S L+
Sbjct: 633 IIFSEEICSSESCGESYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSA 692
Query: 487 YAKCGSLKDAIQIFKEMP----ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
AK I ++M N+ ++N LI+ + L L +M+ LGY+PD
Sbjct: 693 IAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPD 752
Query: 543 SVSFLCVFTACSHWGLVEE-------------------------GLRYFNSMTKVYKLV- 576
V+ + H + + GL N ++ L+
Sbjct: 753 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 812
Query: 577 --------PKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHK 625
P Y ++V+ LC+ G D A L+ +M + + +++S++++S ++
Sbjct: 813 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 872
Query: 626 NQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
++D A ++ N V + Y ++ + L G+W ++ M ER
Sbjct: 873 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 922
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/504 (20%), Positives = 220/504 (43%), Gaps = 19/504 (3%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P V F LLS + + + + LG + + I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 182 DSYCKMHCVDLA----SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA +++ K + D VT ++L+ GY + +A+ L +M ++G++
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 238 TSDFTFQAVLYAGIGLDD-----IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
FTF +++ G+ L + +A Q+ + L+ V N L L
Sbjct: 186 PDTFTFTTLIH-GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
+K+ E D V YN +I + +++NLF ++ F +++++S
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP--- 409
N +L S I + V+ +AL+D + K + EAE+++ ++ R P
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 410 -WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI 468
++++I+ + +E+ +F M + + T+++++K + G +L +
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP----ERNVVSWNALISAYASNGDG 524
+ G + + + L+ + + +A +FK+M N++++N L+ NG
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
+ +FE + +PD ++ + G VE+G F +++ + + P Y +
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS-LKGVSPNVIAYNT 543
Query: 585 IVDVLCRSGKFDKAEKLIAEMPFD 608
++ CR G ++A+ L+ +M D
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKED 567
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/492 (19%), Positives = 204/492 (41%), Gaps = 56/492 (11%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P + F LLS + + LG + N LI
Sbjct: 666 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 725
Query: 182 DSYCK----MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + L ++ K + D VT N+L+ G+ + +A+ L +M ++G++
Sbjct: 726 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 785
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN------ALLDFYSKHDCL 291
TF TTLI +F+ N AL+D + C
Sbjct: 786 PDTVTF-------------------------TTLIHGLFLHNKASEAVALIDRMVQRGC- 819
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
P+L V+Y ++ G ++NL K++ K + ++T++
Sbjct: 820 ---------QPDL--VTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 868
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-- 409
L ++ V+ ++L+ R +A R+ + R P
Sbjct: 869 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 928
Query: 410 --WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
++A+I A V+ G ++ KL+ EM + ++ + T++S++ L + KQ+
Sbjct: 929 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 988
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGD 523
+IR + ++ + L++ + K + +++F+EM +R N V++ LI + D
Sbjct: 989 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 1048
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ +F++MV +G P+ +++ + G + + + F + + + P Y
Sbjct: 1049 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR-STMEPDIYTYN 1107
Query: 584 SIVDVLCRSGKF 595
+++ +C++GK+
Sbjct: 1108 IMIEGMCKAGKW 1119
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 195/477 (40%), Gaps = 32/477 (6%)
Query: 46 NYQIMDLVQTG----QLSEARELFDQM----PYRNTISSNVMISGYLKEGKLSIAKEIFD 97
+Y ++++TG +L +A LF M P+ + I + ++S K K + +
Sbjct: 648 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 707
Query: 98 SM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPK 153
M + N TY +LI + + + A L +M + G +PD VT +LL+G
Sbjct: 708 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 767
Query: 154 MIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYN 209
I + +V++G+ + +LI + A L M QR D VTY
Sbjct: 768 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 827
Query: 210 ALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL----DDIAFGQQIHGY 265
A++ G G A+ L +M E + + V+ + D + ++
Sbjct: 828 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 887
Query: 266 AVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITAYAWTGL 321
V+ NV ++L+ + +A +L M E + V+++ +I A+ G
Sbjct: 888 GVRP----NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 943
Query: 322 IKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANA 381
+ ++ L+ ++ D F ++++++ + L +Q+ I V+ N
Sbjct: 944 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 1003
Query: 382 LVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
L++ + K +R ++ +F ++S R TV +T +I Q + + +F +M
Sbjct: 1004 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 1063
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
V + T+ +L ++ + Y+ RS IY + +++ K G K
Sbjct: 1064 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 1120
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/541 (19%), Positives = 210/541 (38%), Gaps = 84/541 (15%)
Query: 146 LSGCNDPKMIKGLFQV------HSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE 199
L G +P + F + D I+ N L D VDL + K
Sbjct: 18 LQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKS 77
Query: 200 MPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFG 259
P V +N L++ A + I L +M+ LG +T+
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF------------- 124
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWT 319
I+ + ++ L + V L + KL Y E D V+ + ++ Y +
Sbjct: 125 --INCFCRRSQLSLALAV-------------LAKMMKLGY---EPDIVTLSSLLNGYCHS 166
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA 379
I +++ L ++ Y F F T++ G LH++A SE A
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIH----------GLFLHNKA------SE---A 207
Query: 380 NALVD-MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
ALVD M + +P+ V + +++ + G + +L L +M + +
Sbjct: 208 VALVDQMVQRGCQPD-------------LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
AD + +++ + L + + G ++ S+L+ G DA +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 499 IFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
+ +M ER NVV+++ALI A+ G KL++EM+ PD ++ +
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 555 HWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDE 611
++E F M P Y++++ C++ + ++ +L EM +
Sbjct: 375 MHDRLDEAKHMFELMIS-KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKA 671
+ ++++++ ++ D A+ +Q+ ++ V P + NIL + G ++ GK+ KA
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGV----HPNILTYNILLD-GLCKN-GKLAKA 487
Query: 672 M 672
M
Sbjct: 488 M 488
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 26/206 (12%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGK 88
+++ +P+ + I V+ G+L +A +L+++M R N + + +I+G+ +
Sbjct: 919 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 978
Query: 89 LSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
L AK++ + M+ + N VTY LI G+ K+ + + +LF M + G + VT+ T
Sbjct: 979 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 1038
Query: 145 LLSG------CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
L+ G C++ +M V +V +G ++ N L+D CK + A ++
Sbjct: 1039 LIHGFFQARDCDNAQM------VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF- 1091
Query: 199 EMPQR-----DSVTYNALIAGYANEG 219
E QR D TYN +I G G
Sbjct: 1092 EYLQRSTMEPDIYTYNIMIEGMCKAG 1117
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 135/645 (20%), Positives = 273/645 (42%), Gaps = 106/645 (16%)
Query: 52 LVQTGQLSEARELFDQMPYRNTISS---------------------NVMISGYLKEGKLS 90
LV++G+LS+A+ +M R+ +S +++I Y++ KL
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 182
Query: 91 IAKEIFDSMVERNAVTYTL-----LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
A E F +++ T ++ LIG + A+ ++ + RSG + T +
Sbjct: 183 EAHEAF-TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIM 241
Query: 146 LSG-CNDPKMIK-GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
++ C D KM K G F S V + G ++ N+LI +Y ++ A +L MP +
Sbjct: 242 VNALCKDGKMEKVGTFL--SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299
Query: 204 D----SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFG 259
TYN +I G G + A ++F EM G T++++L D+
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITA 315
+++ ++ ++ ++++ +++ L +A F + E D V Y ++I
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
Y G+I ++NL ++ LQ G + +
Sbjct: 420 YCRKGMISVAMNLRNEM------------------------LQQGCAM-----------D 444
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFS 431
V+ N ++ K + EA+++F +++ R P T +I + + G+ + +++LF
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+M+ + D T+ ++L + I K++ + ++ + + + S LV+ G
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 492 SLKDAIQIFKEMPERN----VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
L +A +++ EM +N V+ N++I Y +G+ E+M+ G+ PD +S+
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 548 CVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH-----------YASIVDVLCRSGKFD 596
+ +G V E +M+K + LV K E Y SI+ CR +
Sbjct: 625 TLI-----YGFVRE-----ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 597 KAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLF 638
+AE ++ +M +PD ++ ++N N A R +++
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 120/582 (20%), Positives = 243/582 (41%), Gaps = 71/582 (12%)
Query: 41 STSRSNYQIMDL-----VQTGQLSEARELFDQMPYRN-TIS---SNVMISGYLKEGKLSI 91
S SN + DL VQ +L EA E F + + T+S N +I ++ G + +
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 92 A----KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
A +EI S V N T +++ K + + ++ G PD VT+ TL+S
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR---- 203
+ +++ F++ + + G V N++I+ CK + A +++ EM +
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEMR------DL--------------GFETSDFTF 243
DS TY +L+ +G E K+F +MR DL + + F
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
+V AG+ D++ + I GY K + + + N +L + C
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML----QQGC------------A 442
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN----MLDLQM 359
+D V+YN ++ ++ E+ LF ++ +R FP + L++ + + +LQ
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMT----ERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMIS 415
+L + +V+ N L+D + K + A+ I+ + S+ +P ++ +++
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
A GH E+ +++ EM N+ S++K + S G+ +I GF+
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPER------NVVSWNALISAYASNGDGEATLK 529
+ + L+ + + ++ A + K+M E +V ++N+++ + +
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
+ +M+ G PD ++ C+ + E R + M +
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 182/433 (42%), Gaps = 34/433 (7%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQM------PYRNTISSNVMISGYLKEGKLS 90
GF P N I L + G+ A+E+F +M P T S +M + K+G +
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA--CKKGDVV 357
Query: 91 IAKEIFDSMVERNA----VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
+++F M R+ V ++ ++ +++S +A F + +G PD V + L+
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR--- 203
G MI + + +++ G V+ N+++ CK + A +L+ EM +R
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 204 -DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
DS T LI G+ G + A++LF +M++ T+ +L + DI ++I
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM------PELDGVSYNMMITAY 316
V ++ + L++ L EA +++ +M P + + N MI Y
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV--MICNSMIKGY 595
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATML---SLAANMLD-LQMGRQLHSQAIVTTA 372
+G + + K+ + + T++ NM + +++ +
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLK 428
D V N+++ + + + +EAE + K+ R P +T MI+ V + E+ +
Sbjct: 656 D--VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 429 LFSEMRRDNVTAD 441
+ EM + + D
Sbjct: 714 IHDEMLQRGFSPD 726
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
N ++ + F +++ + + + + GF SI A +AL+ + G ++ A
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 497 IQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
+++E+ NV + N +++A +G E ++ G PD V++ + +A
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDP 609
S GL+EE N+M P Y ++++ LC+ GK+++A+++ AEM P
Sbjct: 280 YSSKGLMEEAFELMNAMPG-KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 610 DEIMWSSIL-NSCRIHKNQDLAKRAAEQLFNMEVLRDAAP----YVTMSNILAEAGQWES 664
D + S+L +C K D+ + E++F+ RD P + +M ++ +G +
Sbjct: 339 DSTTYRSLLMEAC---KKGDVVE--TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 665 VGKVKKAMRERGL 677
+++E GL
Sbjct: 394 ALMYFNSVKEAGL 406
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 49/236 (20%)
Query: 54 QTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAV 105
+ G L A ELF +M + + ++ N ++ G+ K G + AKEI+ MV + +
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 106 TYTLLIGGYSKSDQFIEAFKLFVRM-------------------CRSGTK---------- 136
+Y++L+ EAF+++ M CRSG
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 137 ------PDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKLGH-DSAVIICNSLIDSYCKMH 188
PD +++ TL+ G + M K V + G V NS++ +C+ +
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 189 CVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
+ A + ++M +R D TY +I G+ ++ EA ++ EM GF D
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 218/496 (43%), Gaps = 63/496 (12%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLF 127
+TI+ + +++G+ EG++S A + D MVE + VT + LI G + EA L
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 128 VRMCRSGTKPDYVTFVTLLS---GCNDPKMIKGLF-QVHSHVVKLGHDSAVIICNSLIDS 183
RM G +PD VT+ +L+ + + LF ++ +K ++V+ + +IDS
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK----ASVVQYSIVIDS 254
Query: 184 YCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETS 239
CK D A L+ EM + D VTY++LI G N+G + K+ EM
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 240 DFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY 299
TF A++ + + ++++ + + + N+L+D + K +CL EA ++F
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 300 KMP----ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
M E D V+Y+++I +Y + + + LF
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF-------------------------- 408
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WT 411
R++ S+ ++ + N LV + + + A+ +F ++ SR P +
Sbjct: 409 -----REISSKGLIPNT----ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
++ NG ++L++F +M++ +T + ++ N + + L +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGDGEAT 527
G + + ++ K GSL +A +F++M E ++N LI A+ ++
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 528 LKLFEEMVLLGYQPDS 543
++L EEM + G+ DS
Sbjct: 580 VELIEEMKVCGFSADS 595
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 139/298 (46%), Gaps = 16/298 (5%)
Query: 52 LVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSMVERN---- 103
L + G +A LF++M + + ++ + +I G +GK ++ M+ RN
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 104 AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHS 163
VT++ LI + K + +EA +L+ M G PD +T+ +L+ G + Q+
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 164 HVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEG 219
+V G + ++ + LI+SYCK VD +L++E+ + +++TYN L+ G+ G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 220 FNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN 279
A +LF EM G S T+ +L ++ +I K+ + + + N
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 280 ALLDFYSKHDCLVEARKLFYKMPE----LDGVSYNMMITAYAWTGLIKESINLFRKLQ 333
++ + +A LF + + D V+YN+MI G + E+ LFRK++
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 154/328 (46%), Gaps = 22/328 (6%)
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
L A KL Y E D ++++ ++ + G + E++ L ++ + + P +S
Sbjct: 128 LGRAWKLGY---EPDTITFSTLVNGFCLEGRVSEAVALVDRM----VEMKQRPDLVTVST 180
Query: 351 AANMLDLQMGRQLHSQAIVTTA-----DSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
N L L+ GR + ++ + + +++ K A +F K+ R
Sbjct: 181 LINGLCLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 406 ----CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
V ++ +I + ++G F+++L LF+EM + AD T++S++ N G
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV----VSWNALISA 517
++ +I + + SAL+D++ K G L +A +++ EM R + +++N+LI
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVP 577
+ ++F+ MV G +PD V++ + + V++G+R F ++ L+P
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIP 418
Query: 578 KREHYASIVDVLCRSGKFDKAEKLIAEM 605
Y ++V C+SGK + A++L EM
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEM 446
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 111/553 (20%), Positives = 223/553 (40%), Gaps = 88/553 (15%)
Query: 88 KLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
K++ A ++F+SM++ + + L +++ Q+ M +G + D T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 144 TLLSG-CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK---E 199
+++ C K++ F V KLG++ I ++L++ +C V A L E
Sbjct: 110 IMINCYCRKKKLLFA-FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 200 MPQR-DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
M QR D VT + LI G +G EA+ L M + GF+ D++ +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQP---------------DEVTY 213
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELD----GVSYNMMIT 314
G ++ GN+ L A LF KM E + V Y+++I
Sbjct: 214 GPVLNRLCKS---------GNSAL-----------ALDLFRKMEERNIKASVVQYSIVID 253
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
+ G ++++LF +++ +++++ N G ++ + I
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMR 434
+V+ +AL+D++ V+ G E+ +L++EM
Sbjct: 314 DVVTFSALIDVF-------------------------------VKEGKLLEAKELYNEMI 342
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
+ D T+ S++ + Q+ ++ G I S L++ Y K +
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 495 DAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
D +++F+E+ + N +++N L+ + +G A +LF+EMV G P V++ +
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 551 TACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL---IAEMPF 607
G + + L F M K ++ Y I+ +C + K D A L +++
Sbjct: 463 DGLCDNGELNKALEIFEKMQK-SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 608 DPDEIMWSSILNS 620
PD + ++ ++
Sbjct: 522 KPDVVTYNVMIGG 534
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 8/277 (2%)
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
V + +I+ G E+L L M D+ T+ VL + +L L
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGD 523
+ +S+ S ++D K GS DA+ +F EM + +VV++++LI ++G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ K+ EM+ PD V+F + G + E +N M + P Y
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYN 354
Query: 584 SIVDVLCRSGKFDKAEK---LIAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
S++D C+ +A + L+ +PD + +S ++NS K D R ++ +
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 641 EVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
++ + Y T+ ++G+ + ++ + M RG+
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 54/246 (21%)
Query: 20 NSYPNVKTCIDA-----RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR--- 71
NSY K D I G P+T N ++ Q+G+L+ A+ELF +M R
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 72 -NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVT-----YTLLIGGYSKSDQFIEAFK 125
+ ++ +++ G G+L+ A EIF+ M +++ +T Y ++I G + + +A+
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 126 LFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYC 185
LF + G KPD VT+ N +I C
Sbjct: 512 LFCSLSDKGVKPDVVTY-----------------------------------NVMIGGLC 536
Query: 186 KMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
K + A L+++M + D TYN LI + +++L EM+ GF
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Query: 242 TFQAVL 247
T + V+
Sbjct: 597 TIKMVI 602
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 129/557 (23%), Positives = 248/557 (44%), Gaps = 46/557 (8%)
Query: 90 SIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG- 148
++ KE+ +S V N TY +LI G+ + A LF +M G P+ VT+ TL+ G
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----D 204
C K+ G + S +K G + +I N +I+ C+ + S + EM +R D
Sbjct: 251 CKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
VTYN LI GY EG +A+ + EM G S T+ +++++ ++ +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-----VSYNMMITAYAWT 319
L N L+D +S+ + EA ++ +M + +G V+YN +I + T
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND-NGFSPSVVTYNALINGHCVT 428
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA 379
G ++++I + ++ ++T+LS D+ ++ + + + +
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVP-----WTAMISANVQNGHFEESLKLFSEMR 434
++L+ + + RR +EA ++ ++ R +P +TA+I+A G E++L+L +EM
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEM-LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 435 RDNVTADQATFASVLKASANLASISLGKQL---------------HSYIIRSGFMSSIYA 479
V D T++ ++ + K+L + +I + +
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPERN----VVSWNALISAYASNGDGEATLKLFEEMV 535
+L+ + G + +A Q+F+ M +N ++N +I + GD L++EMV
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 536 LLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL----VPKREHYASIVDVLCR 591
G+ +V+ + + A G V E NS+ V+ L + + E +V++ R
Sbjct: 668 KSGFLLHTVTVIALVKALHKEGKVNE----LNSVI-VHVLRSCELSEAEQAKVLVEINHR 722
Query: 592 SGKFDKAEKLIAEMPFD 608
G D ++AEM D
Sbjct: 723 EGNMDVVLDVLAEMAKD 739
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 195/509 (38%), Gaps = 70/509 (13%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLF 127
N IS NV+I+G +EG++ + M R + VTY LI GY K F +A +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
M R G P +T+ SLI S CK
Sbjct: 334 AEMLRHGLTPSVITYT-----------------------------------SLIHSMCKA 358
Query: 188 HCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
++ A + +M R + TY L+ G++ +G+ EA ++ EM D GF S T+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 244 QAVL----YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFY 299
A++ G D IA + + + ++ V + Y + L R++
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 300 KMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
K + D ++Y+ +I + KE+ +L+ ++ F + +++ DL+
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP---------- 409
QLH++ + +V+ + L++ K R EA+R+ +KL +VP
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 410 ---------WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISL 460
++I G E+ ++F M N D + ++ I
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 461 GKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD----AIQIFKEMPERNVVSWNALIS 516
L+ +++SGF+ ALV K G + + + + + L+
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVE 718
Query: 517 AYASNGDGEATLKLFEEMVLLGYQPDSVS 545
G+ + L + EM G+ P+ +S
Sbjct: 719 INHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 218/499 (43%), Gaps = 38/499 (7%)
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI-GLDDIAFGQQIH 263
S ++ ++ Y+ +A+ + + GF ++ AVL A I +I+F + +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-----VSYNMMITAYAW 318
+++ + NVF N L+ + + A LF KM E G V+YN +I Y
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCK 252
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS---- 374
I + L R + + P ++ N L + GR ++T +
Sbjct: 253 LRKIDDGFKLLRSMALKGLE----PNLISYNVVINGL-CREGRMKEVSFVLTEMNRRGYS 307
Query: 375 -EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKL 429
+ + N L+ Y K +A + ++ P +T++I + + G+ +++
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 430 FSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAK 489
+MR + ++ T+ +++ + ++ ++ + +GF S+ +AL++ +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 490 CGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVS 545
G ++DAI + ++M E+ +VVS++ ++S + + D + L++ EMV G +PD+++
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 546 FLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
+ + +E + M +V L P Y ++++ C G +KA +L EM
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 606 ---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM----SNILAE 658
PD + +S ++N AKR +LF E + Y T+ SNI
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI--- 603
Query: 659 AGQWESVGKVKKAMRERGL 677
+++SV + K +G+
Sbjct: 604 --EFKSVVSLIKGFCMKGM 620
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 182/441 (41%), Gaps = 70/441 (15%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKE 86
A +++ G PS I + + G ++ A E DQM R N + ++ G+ ++
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 87 GKLS----IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
G ++ + +E+ D+ + VTY LI G+ + + +A + M G PD V++
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
T+LSG +C+ + VD A ++ +EM +
Sbjct: 454 STVLSG-----------------------------------FCRSYDVDEALRVKREMVE 478
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
+ D++TY++LI G+ + KEA L+ EM +G +FT+ A++ A D+
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEAR----KLFYKMPELDGVSYNM--- 311
Q+H V+ ++ +V + L++ +K EA+ KLFY+ V+Y+
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 312 ------------MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
+I + G++ E+ +F + + + M+ D++
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWT----AMIS 415
L+ + + + + ALV K + E + V + C + ++
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVE 718
Query: 416 ANVQNGHFEESLKLFSEMRRD 436
N + G+ + L + +EM +D
Sbjct: 719 INHREGNMDVVLDVLAEMAKD 739
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 131/588 (22%), Positives = 245/588 (41%), Gaps = 39/588 (6%)
Query: 49 IMDLVQTGQLSEARELFDQM------PYRNTISSNVMISGYLKEGK----LSIAKEIFDS 98
+ L + + E+ D+M P +SS ++ G K GK L++ K + D
Sbjct: 304 VYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS--LVEGLRKRGKIEEALNLVKRVVDF 361
Query: 99 MVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKG 157
V N Y LI K +F EA LF RM + G +P+ VT+ L+ C K+
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD----SVTYNALIA 213
L +V G +V NSLI+ +CK + A EM + VTY +L+
Sbjct: 422 L-SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 214 GYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL----YAGIGLDDIAFGQQIHGYAVKT 269
GY ++G +A++L+ EM G S +TF +L AG+ D + ++ + VK
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE----LDGVSYNMMITAYAWTGLIKES 325
N N +++ Y + + +A + +M E D SY +I TG E+
Sbjct: 541 ----NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 326 INLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDM 385
L + + +L L+ + + + D +++ L+D
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 386 YAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTAD 441
K + + + ++ R P +T+MI A + G F+E+ ++ M + +
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 442 QATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG-SLKDAIQIF 500
+ T+ +V+ ++ + L S + + + +D+ K ++ A+++
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776
Query: 501 KEMPE---RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWG 557
+ + N ++N LI + G E +L M+ G PD +++ +
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 558 LVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
V++ + +NSMT+ + P R Y +++ C +G+ KA +L EM
Sbjct: 837 DVKKAIELWNSMTE-KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/602 (20%), Positives = 256/602 (42%), Gaps = 60/602 (9%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMVERNAV-----TYTLLIGGYSKSDQFIEAFKLFVRMC 131
+++I Y++ ++ +F M+ + ++ T + L+ G K F A +LF M
Sbjct: 160 DLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV 219
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
G +PD + ++ + K + ++ +H+ G D ++ N LID CK V
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 192 LASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
A + K++ + D VTY L+ G + +++ EM L F S+ +++
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL--- 304
I + V + N+FV NAL+D K EA LF +M ++
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLR 399
Query: 305 -DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
+ V+Y+++I + G + +++ ++ T +P+ ++++ D+
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGF 459
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQ 419
++ I + V+ +L+ Y + +A R++ +++ + P +T ++S +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG------- 472
G +++KLF+EM NV ++ T+ +++ +S + + G
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 473 -------------------FMSSIYAG---------SALVDMYAKCGSLKDAIQIFKEMP 504
F+ ++ G + L+ + + G L++A+ + +EM
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 505 ERNV----VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVE 560
+R V V + LI + D + L +EM G +PD V + + A S G +
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 561 EGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM-PFD--PDEIMWSSI 617
E ++ M VP Y ++++ LC++G ++AE L ++M P P+++ +
Sbjct: 700 EAFGIWDLMIN-EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 618 LN 619
L+
Sbjct: 759 LD 760
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 145/692 (20%), Positives = 281/692 (40%), Gaps = 68/692 (9%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGK 88
+V G P I L + LS A+E+ M N + NV+I G K+ K
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 89 L----SIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
+ I K++ ++ + VTY L+ G K +F ++ M P +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ-- 202
L+ G I+ + VV G + + N+LIDS CK A L+ M +
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 203 --RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
+ VTY+ LI + G A+ EM D G + S + + +++ DI+ +
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM------PELDGVSYNMMIT 314
+ L V +L+ Y + +A +L+++M P + ++ +++
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI--YTFTTLLS 515
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG----RQLHSQAIVT 370
GLI++++ LF ++ + M+ D+ +++ + IV
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 371 TADSEVLVANALVDMYAKCRRPEEAE-RIFV--------KLSSRCTVPWTAMISANVQNG 421
S + + L C + +E ++FV +L+ C +T ++ + G
Sbjct: 576 DTYSYRPLIHGL------CLTGQASEAKVFVDGLHKGNCELNEIC---YTGLLHGFCREG 626
Query: 422 HFEESLKLFSEMRRDNVTADQATFASVLKASANLAS----ISLGKQLHSYIIRSGFMSSI 477
EE+L + EM + V D + ++ S L K++H ++ I
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD--DVI 684
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEE 533
Y ++++D +K G K+A I+ M N V++ A+I+ G L +
Sbjct: 685 Y--TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 534 MVLLGYQPDSVSFLCVFTACSHWGL-VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRS 592
M + P+ V++ C + + +++ + N++ K L+ Y ++ CR
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK--GLLANTATYNMLIRGFCRQ 800
Query: 593 GKFDKAEKLIAEMPFD---PDEIMWSSILNS-CRIHKNQDLAKRAAEQLFNME---VLRD 645
G+ ++A +LI M D PD I +++++N CR ++ K+A E +M + D
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCR----RNDVKKAIELWNSMTEKGIRPD 856
Query: 646 AAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
Y T+ + AG+ +++ M +GL
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 123/573 (21%), Positives = 233/573 (40%), Gaps = 101/573 (17%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM----------PYRNTISSNVMIS 81
R+ K G P+ + I + G+L A +M PY N +I+
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY------NSLIN 445
Query: 82 GYLKEGKLSIAK----EIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKP 137
G+ K G +S A+ E+ + +E VTYT L+GGY + +A +L+ M G P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
TF TLLSG +I+ ++ + + + + N +I+ YC+ + A +
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 198 KEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGL 253
KEM ++ D+ +Y LI G G EA K+F++ G + + Y G+
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVD----GLHKGNCELNEICYTGL-- 618
Query: 254 DDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMI 313
+HG+ + L + L +++ + +LD V Y ++I
Sbjct: 619 --------LHGFCREGKL----------------EEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
G +K DR+ F L M D R L ++ T
Sbjct: 655 -----DGSLKHK------------DRKLF-----FGLLKEMHD----RGLKPDDVIYT-- 686
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKL 429
+++D +K +EA I+ + + VP +TA+I+ + G E+ L
Sbjct: 687 -------SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Query: 430 FSEMRRDNVTADQATFASVLKA-SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYA 488
S+M+ + +Q T+ L + + +LH+ I++ G +++ + L+ +
Sbjct: 740 CSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFC 798
Query: 489 KCGSLKDAIQIFKEMPERNV----VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSV 544
+ G +++A ++ M V +++ +I+ D + ++L+ M G +PD V
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 545 SFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVP 577
++ + C G + + N M + L+P
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLR-QGLIP 890
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 118/592 (19%), Positives = 238/592 (40%), Gaps = 86/592 (14%)
Query: 107 YTLLIGGYSKSDQFIEAFKLFVRM-CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHV 165
+ LLI Y +S + ++ +F M + P+ T LL G + ++ + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 166 VKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFN 221
V +G V I +I S C++ + A ++ M + V YN LI G +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 222 KEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNAL 281
EA+ + ++ + T+ ++Y + + G
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIG---------------------- 316
Query: 282 LDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN 341
L+ + CL + P VS ++ G I+E++NL +++ +
Sbjct: 317 LEMMDEMLCLRFS-------PSEAAVSS--LVEGLRKRGKIEEALNLVKRVV-------D 360
Query: 342 FPFATMLSLAANMLD-LQMGRQLHSQAIVTTADSEV------LVANALVDMYAKCRRPE- 393
F + L + ++D L GR+ H ++ ++ + + L+DM+ CRR +
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF--CRRGKL 418
Query: 394 --------EAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATF 445
E +KLS P+ ++I+ + + G + +EM + T+
Sbjct: 419 DTALSFLGEMVDTGLKLS---VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 446 ASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE 505
S++ + I+ +L+ + G SIY + L+ + G ++DA+++F EM E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 506 RNV----VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF------LCVFTACSH 555
NV V++N +I Y GD + +EM G PD+ S+ LC+ S
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 556 WGLVEEGLRYFN-SMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDE 611
+ +GL N + ++ Y ++ CR GK ++A + EM D D
Sbjct: 596 AKVFVDGLHKGNCELNEIC--------YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 612 IMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWE 663
+ + +++ HK++ L +++ + + D Y +M + ++ G ++
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYL---KEGKL 89
++ G P+ I L + G ++EA L +M +++ + V +L +G++
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 90 SIAK--EIFDSMVE---RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
+ K E+ +++++ N TY +LI G+ + + EA +L RM G PD +T+ T
Sbjct: 768 DMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTT 827
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
+++ +K ++ + + + G + N+LI C + A++L EM ++
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 205 SVTYN 209
+ N
Sbjct: 888 LIPNN 892
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/598 (21%), Positives = 258/598 (43%), Gaps = 29/598 (4%)
Query: 62 RELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKS 117
R++ + + N +S + ++ Y++ K A + M++R N + +L+ G ++
Sbjct: 96 RKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRN 155
Query: 118 DQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+ +A L M R+ PD ++ T++ G + K ++ ++ + + G +++
Sbjct: 156 LECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 178 NSLIDSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
LID++CK +D A KEM + D V Y +LI G+ + G LF E+ +
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
G T+ ++ L + +I + ++ + NV+ L+D E
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 294 ARKLFYKMPELD----GVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
A +L M E D V+YN++I GL+ +++ + ++ + N + +L
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 350 LAANMLDLQMGRQLHSQAIVTTA--DSEVLVANALVDMYAKCRRPEEAERIF----VKLS 403
DL +L + ++ D +V+ NAL+ K R +A I+ KL
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 404 SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
+ V ++++ ++ G ++++L+ ++ + + T+ +++ +++ K
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERN----VVSWNALISAYA 519
L + S S++ + L+ K GSL A ++F+EM N VVS+N +I
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 520 SNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR 579
GD ++ L M G PD ++ + G ++E + +F+ M P
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD-SGFEPDA 634
Query: 580 EHYASIVDVLCRSGKFDKAEKLIAEMPFDPD-----EIMWSSILNSCRIHKNQDLAKR 632
S++ G+ DK +L+ ++ D D E+ + + C N DLAKR
Sbjct: 635 HICDSVLKYCISQGETDKLTELVKKL-VDKDIVLDKELTCTVMDYMCNSSANMDLAKR 691
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 226/509 (44%), Gaps = 50/509 (9%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTI-----SSNVMISGYLK 85
A ++K GF + N + L + + +A L +M RN++ S N +I G+
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR-RNSLMPDVFSYNTVIRGFC- 188
Query: 86 EGK-----LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYV 140
EGK L +A E+ S + VT+ +LI + K+ + EA M G + D V
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 141 TFVTLLSG---CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
+ +L+ G C + K LF V++ G I N+LI +CK+ + AS+++
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFD---EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 198 KEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA---- 249
+ M +R + TY LI G G KEA++L M + E + T+ ++
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 250 GIGLDDIAFGQQIHGYAVK-TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM------P 302
G+ D + + + + + +N+ +G +K D L EA KL Y M
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGG----LCAKGD-LDEASKLLYLMLKDSSYT 420
Query: 303 ELDGVSYNMMITAYAWTGLIKESINLFRKL--QFTKYDRRNFPFATMLSLAANMLD--LQ 358
+ D +SYN +I + ++++++ L + DR +L A ++ ++
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 359 MGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMI 414
+ +Q+ IV +D+ A++D + K A+ + K+ P + ++
Sbjct: 481 LWKQISDSKIVRNSDT----YTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM 474
S+ + G +++ +LF EM+RDN D +F ++ S I + L + R+G
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
++ S L++ + K G L +AI F +M
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 24/278 (8%)
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
V W +I A + G +E++ EM+ + AD + S+++ + + GK L
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGD 523
++ G + L+ + K G LK+A +IF+ M ER NV ++ LI G
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ L+L M+ +P++V++ + GLV + + M K + P Y
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK-RRTRPDNITYN 391
Query: 584 SIVDVLCRSGKFDKAEKLIAEMP-----FDPDEIMWSSILNSC----RIHKNQDLAKRAA 634
++ LC G D+A KL+ M DPD I ++++++ R+H+ D+
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV 451
Query: 635 EQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAM 672
E+L A VT +NIL + G V KAM
Sbjct: 452 EKL-------GAGDRVT-TNILLNSTL--KAGDVNKAM 479
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/547 (22%), Positives = 245/547 (44%), Gaps = 70/547 (12%)
Query: 115 SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV 174
S +++F+ +F+ +M R G P +L D +M+ V+ +++ G V
Sbjct: 182 SMAEKFLLSFE---KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQRD----SVTYNALIAGYANEGFNKEAIKLFME 230
I N+++DS K ++ +++ EM +R+ VTYN LI G++ G +EA + +
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 298
Query: 231 MRDLGFETSDFTFQAVL--YAGIGLDDIAFG---QQIHGYAVKTTLIWNVFVGNALLDFY 285
MR GF + ++F ++ Y GL D A+G + ++ TT +N+++ AL DF
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC-ALCDFG 357
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
D AR+L M D VSYN ++ Y G E+ LF
Sbjct: 358 RIDD----ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFD--------------- 398
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
DL+ G +H +IVT N L+D + E A+R+ +++++
Sbjct: 399 ----------DLRAG-DIHP-SIVT--------YNTLIDGLCESGNLEGAQRLKEEMTTQ 438
Query: 406 CTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
P +T ++ V+NG+ + +++ EM R + D + + L
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498
Query: 462 KQLHSYIIRSGFMS---SIYAGSALVDMYAKCGSLKDAIQ----IFKEMPERNVVSWNAL 514
+LH ++ + + +IY + +D K G+L AI+ IF+ + V++ +
Sbjct: 499 FRLHEEMVATDHHAPDLTIY--NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 515 ISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYK 574
I Y NG + L++EM+ P +++ + + G +E+ +Y M K
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK-RG 615
Query: 575 LVPKREHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILN-SCRIHKNQDLA 630
+ P + +++ +C++G D+A + + +M P++ ++ +++ +C K +++
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVV 675
Query: 631 KRAAEQL 637
K E L
Sbjct: 676 KLYKEML 682
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/536 (21%), Positives = 209/536 (38%), Gaps = 48/536 (8%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRN----TISSNVMISGYLKEG 87
++++ GF PS N + L + +++A +++ M I+ N M+ K G
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 88 KLSIAKEIFDSMVERN----AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFV 143
L +I+ M RN VTY +LI G+SK+ + EA + M RSG +F
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 144 TLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
L+ G + + V ++ G N I + C +D A +L M
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIH 263
D V+YN L+ GY G EA LF ++R S T+ ++ G+ G Q
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI-DGLCESGNLEGAQRL 431
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIK 323
+ T LI+ D ++Y ++ + G +
Sbjct: 432 KEEMTTQLIFP------------------------------DVITYTTLVKGFVKNGNLS 461
Query: 324 ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS-EVLVANAL 382
+ ++ ++ + + T + D +LH + + T + ++ + N
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNV 438
+D K +A K+ VP +T +I ++NG F+ + L+ EM R +
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
T+ ++ A + Q + + + G ++ +AL+ K G++ +A +
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 499 IFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVF 550
+M E N S+ LIS E +KL++EM+ +PD + +F
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 196/482 (40%), Gaps = 58/482 (12%)
Query: 24 NVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNT----ISSNVM 79
N + + +++ G P+ N + + G L +++ +M RN ++ N++
Sbjct: 220 NKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 80 ISGYLKEGKLSIAKEIFDSMVERN-AVT---YTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
I+G+ K GK+ A+ M AVT + LI GY K F +A+ + M +G
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 136 KPDYVTF----------------VTLLSGCNDPKMIKGLFQVHSHVVKLGH--------- 170
P T+ LLS P ++ +H ++ K+G
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYI-KMGKFVEASLLFD 398
Query: 171 -------DSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEG 219
+++ N+LID C+ ++ A +L +EM + D +TY L+ G+ G
Sbjct: 399 DLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNG 458
Query: 220 FNKEAIKLFMEMRDLGFETSDFTF--QAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVF 276
A +++ EM G + + + +AV +G D AF ++H V T ++
Sbjct: 459 NLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF--RLHEEMVATDHHAPDLT 516
Query: 277 VGNALLDFYSKHDCLVEA----RKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKL 332
+ N +D K LV+A RK+F D V+Y +I Y G K + NL+ ++
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Query: 333 QFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRP 392
+ + ++ A L+ Q ++ V+ NAL+ K
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 393 EEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASV 448
+EA R K+ P +T +IS N +EE +KL+ EM + D T ++
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 449 LK 450
K
Sbjct: 697 FK 698
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 12/251 (4%)
Query: 408 VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
+ + M+ + + G E K++ EM+R N+ + T+ ++ + + ++ H
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 298
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGD 523
+ RSGF + Y+ + L++ Y K G DA + EM + ++N I A G
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ +L M PD VS+ + G E F+ + + + P Y
Sbjct: 359 IDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIVTYN 413
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNM 640
+++D LC SG + A++L EM PD I +++++ + N +A +++
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 641 EVLRDAAPYVT 651
+ D Y T
Sbjct: 474 GIKPDGYAYTT 484
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/376 (18%), Positives = 151/376 (40%), Gaps = 42/376 (11%)
Query: 344 FATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF--VK 401
F TML DL+ ++ + + + N L++ ++K + EEA R ++
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 402 LSSRCTVPWT--AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
S P++ +I + G F+++ + EM + +T+ + A + I
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 460 LGKQL----------------HSYI--------------IRSG-FMSSIYAGSALVDMYA 488
++L H YI +R+G SI + L+D
Sbjct: 361 DARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 489 KCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSV 544
+ G+L+ A ++ +EM + +V+++ L+ + NG+ ++++EM+ G +PD
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 545 SFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKA---EKL 601
++ G ++ R M P Y +D LC+ G KA ++
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540
Query: 602 IAEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQ 661
I + PD + +++++ + +A+ +++ + Y + A+AG+
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGR 600
Query: 662 WESVGKVKKAMRERGL 677
E + M++RG+
Sbjct: 601 LEQAFQYSTEMKKRGV 616
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 17/245 (6%)
Query: 18 AKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISS- 76
KN ++ T + +++ G P + + ++ G +A L ++M + +
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 77 ----NVMISGYLKEGKLSIA----KEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFV 128
NV I G K G L A ++IF + + VTYT +I GY ++ QF A L+
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 129 RMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMH 188
M R P +T+ L+ G ++ FQ + + K G V+ N+L+ CK
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 189 CVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNK--EAIKLFMEMRDLGFETSDFT 242
+D A + +M + + +Y LI+ N F K E +KL+ EM D E +T
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTMLIS--KNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 243 FQAVL 247
+A+
Sbjct: 693 HRALF 697
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 135/580 (23%), Positives = 255/580 (43%), Gaps = 51/580 (8%)
Query: 78 VMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
++IS KEG++S A +F+ + E + +YT LI ++ S ++ EA +F +M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 134 GTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA---VIICNSLIDSYCKMHCV 190
G KP +T+ +L+ KM ++ S V K+ D N+LI +
Sbjct: 238 GCKPTLITYNVILNVFG--KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 191 DLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
A+Q+++EM D VTYNAL+ Y KEA+K+ EM GF S T+ ++
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 247 L--YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM--- 301
+ YA G+ D A ++ + +VF LL + + + A +F +M
Sbjct: 356 ISAYARDGMLDEAM--ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 302 ---PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL-AANMLDL 357
P + ++N I Y G E + +F ++ + T+L++ N +D
Sbjct: 414 GCKPNI--CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 358 QMG---RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----W 410
++ +++ V ++ N L+ Y++C E+A ++ ++ P +
Sbjct: 472 EVSGVFKEMKRAGFVPERET----FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
+++A + G +E+S K+ +EM ++ T+ S+L A AN I L L +
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEA 526
LV + +KC L +A + F E+ ER ++ + N+++S Y
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 527 TLKLFEEMVLLGYQPDSVSF---LCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ + M G+ P ++ + + + + +G EE LR + K K P Y
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI--LAKGIK--PDIISYN 703
Query: 584 SIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNS 620
+++ CR+ + A ++ +EM PD I +++ + S
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/571 (20%), Positives = 253/571 (44%), Gaps = 53/571 (9%)
Query: 194 SQLYKEMPQRDSVTYNALIAGYANEGFNKE------AIKLFMEMRDLGFETSDFTFQAVL 247
S+L++ + T + L+A GF+K+ A FM+ +D D + A++
Sbjct: 121 SELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQ-SMLDNSVVAII 179
Query: 248 YAGIGLD-------DIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYK 300
+ +G + ++ G Q G+++ +V+ +L+ ++ EA +F K
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSL------DVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 301 MPELDG-----VSYNMMITAYAWTGLIKESI-NLFRKLQFTKYDRRNFPFATMLSLAANM 354
M E DG ++YN+++ + G I +L K++ + + T+++
Sbjct: 234 MEE-DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLS----SRCTVPW 410
Q Q+ + + + NAL+D+Y K RP+EA ++ ++ S V +
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
++ISA ++G +E+++L ++M D T+ ++L + + +
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP----ERNVVSWNALISAYASNGDGEA 526
+G +I +A + MY G + ++IF E+ ++V+WN L++ + NG
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 527 TLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIV 586
+F+EM G+ P+ +F + +A S G E+ + + M + P Y +++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVL 531
Query: 587 DVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVL 643
L R G ++++EK++AEM P+E+ + S+L++ K L AE++++ +
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 644 RDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHP 703
A T+ + ++ + ++ERG + + V I+
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP----DITTLNSMVSIY-------- 639
Query: 704 QMKEIILKIDILSEQMEKEGYVPDTSCALHN 734
++++ K + + + M++ G+ P S A +N
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTP--SMATYN 668
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/573 (20%), Positives = 227/573 (39%), Gaps = 92/573 (16%)
Query: 60 EARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSMV----ERNAVTYTLLI 111
EA ++F++M + ++ N ++ Y K + A ++ + MV + VTY LI
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 112 GGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHD 171
Y++ EA +L +M GTKPD T+ TLLSG ++ + + G
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 172 SAVIICNSLIDSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKL 227
+ N+ I Y +++ E+ D VT+N L+A + G + E +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
F EM+ GF TF N L+ YS+
Sbjct: 477 FKEMKRAGFVPERETF-----------------------------------NTLISAYSR 501
Query: 288 HDCLVEARKLFYKM------PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN 341
+A ++ +M P+L +YN ++ A A G+ ++S + +++ +
Sbjct: 502 CGSFEQAMTVYRRMLDAGVTPDLS--TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 342 FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK 401
+ ++L AN ++ + L + + ++ LV + +KC EAER F
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF-- 617
Query: 402 LSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
SE++ + D T S++ ++
Sbjct: 618 -----------------------------SELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISA 517
+ Y+ GF S+ ++L+ M+++ + +I +E+ + +++S+N +I A
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVP 577
Y N ++F EM G PD +++ + + + EE + M K + P
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRP 767
Query: 578 KREHYASIVDVLCRSGKFDKAEKLIAEM-PFDP 609
+ Y SIVD C+ + D+A+ + ++ DP
Sbjct: 768 NQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 196/471 (41%), Gaps = 20/471 (4%)
Query: 5 HRKIPLKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEAREL 64
+ K+ L + K+ P + +V GF PS N I + G L EA EL
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 65 FDQMPYRNT----ISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSK 116
+QM + T + ++SG+ + GK+ A IF+ M + N T+ I Y
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 117 SDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVII 176
+F E K+F + G PD VT+ TLL+ M + V + + G
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 177 CNSLIDSYCKMHCVDLASQLYKEM----PQRDSVTYNALIAGYANEGFNKEAIKLFMEMR 232
N+LI +Y + + A +Y+ M D TYN ++A A G +++ K+ EM
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 233 DLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
D + ++ T+ ++L+A +I + + + L+ SK D L
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 293 EARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATML 348
EA + F ++ E D + N M++ Y ++ ++ + ++ + + +++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 349 SLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV 408
+ + D ++ + + +++ N ++ Y + R +A RIF ++ + V
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 409 P----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
P + I + + FEE++ + M + +Q T+ S++ L
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 58 LSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTL 109
L EA F ++ R + + N M+S Y + ++ A + D M ER + TY
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKL 168
L+ +S+S F ++ ++ + G KPD +++ T++ C + +M + ++ S +
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM-RDASRIFSEMRNS 728
Query: 169 GHDSAVIICNSLIDSYCK----MHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEA 224
G VI N+ I SY + + + K + + TYN+++ GY EA
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Query: 225 IKLFME-MRDL 234
KLF+E +R+L
Sbjct: 789 -KLFVEDLRNL 798
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 8/176 (4%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISS----NVMISGYLKEGKLS-- 90
GF P + N + + +++A + D M R S N ++ + +
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 91 --IAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
I +EI ++ + ++Y +I Y ++ + +A ++F M SG PD +T+ T +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
M + V +++K G NS++D YCK++ D A +++ D
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 219/533 (41%), Gaps = 86/533 (16%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKE 86
+I+K G++P+T + I L G++SEA EL D+M + I+ N +++G
Sbjct: 147 GKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS 206
Query: 87 GKLSIAKEIFDSMVE----RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
GK + A + D MVE NAVTY ++ KS Q A +L +M K D V +
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
++ G + F + + + G + +I N LI +C D ++L ++M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
R + VT++ LI + EG +EA +L EM ++ GI D I +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEM---------------IHRGIAPDTITY 371
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAW 318
I G+ + L N ++D C R ++N++I Y
Sbjct: 372 TSLIDGFCKENHLDK----ANQMVDLMVSKGCDPNIR------------TFNILINGYCK 415
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
I + + LFRK+ + +V ++ +
Sbjct: 416 ANRIDDGLELFRKMSL-------------------------------RGVV----ADTVT 440
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMR 434
N L+ + + + A+ +F ++ SR P + ++ NG E++L++F ++
Sbjct: 441 YNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Query: 435 RDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLK 494
+ + D + ++ N + + L + G + + ++ K G L
Sbjct: 501 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 495 DAIQIFKEMPERNVV----SWNALISAYASNGDGEATLKLFEEMVLLGYQPDS 543
+A +F++M E ++N LI A+ +GD ++KL EE+ G+ D+
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/532 (19%), Positives = 202/532 (37%), Gaps = 83/532 (15%)
Query: 92 AKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
A ++F M+ + ++ L +K+ Q+ L +M G + T +++
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 148 GCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR---- 203
+ + F ++KLG++ I ++LI+ C V A +L M +
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIH 263
D +T N L+ G G EA+ L +M + G + + T+ VL +
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL-------------NVM 238
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIK 323
+ +T L + RK+ + +LD V Y+++I G +
Sbjct: 239 CKSGQTALAMELL------------------RKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 324 ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
+ NLF +++ + I T ++ N L+
Sbjct: 281 NAFNLFNEMEM-------------------------------KGITTN----IITYNILI 305
Query: 384 DMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVT 439
+ R ++ ++ + R P ++ +I + V+ G E+ +L EM +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
D T+ S++ + Q+ ++ G +I + L++ Y K + D +++
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 500 FKEMPERNVV----SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
F++M R VV ++N LI + G +LF+EMV P+ V++ +
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPF 607
G E+ L F + K K+ Y I+ +C + K D A L +P
Sbjct: 486 NGESEKALEIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 124/292 (42%), Gaps = 17/292 (5%)
Query: 395 AERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASAN 454
ER F S R + + + + + + ++++ LF +M F+ + A A
Sbjct: 42 CERGFSAFSDR-NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAK 100
Query: 455 LASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI----QIFKEMPERNVVS 510
L L + G ++Y S +++ + +C L A +I K E N ++
Sbjct: 101 TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 511 WNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMT 570
++ LI+ G L+L + MV +G++PD ++ + G E + + M
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 571 KVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQ 627
+ Y P Y +++V+C+SG+ A +L+ +M D + +S I++ H +
Sbjct: 221 E-YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 628 DLAKRAAEQLFNMEVLRDAAPYVTMSNIL----AEAGQWESVGKVKKAMRER 675
D A LFN ++ + NIL AG+W+ K+ + M +R
Sbjct: 280 D----NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 481 SALVDMYAKCGSLKDAIQIFKEM----PERNVVSWNALISAYASNGDGEATLKLFEEMVL 536
S LVD+ A DAI +F++M P V+ ++ L SA A + L L ++M L
Sbjct: 62 SGLVDIKAD-----DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMEL 116
Query: 537 LGYQPD----SVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL--VPKREHYASIVDVLC 590
G + S+ C F C L F++M K+ KL P ++++++ LC
Sbjct: 117 KGIAHNLYTLSIMINC-FCRCRKLCLA------FSAMGKIIKLGYEPNTITFSTLINGLC 169
Query: 591 RSGKFDKAEKLI---AEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAA 647
G+ +A +L+ EM PD I ++++N + + A +++ +A
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 648 PYVTMSNILAEAGQWESVGKVKKAMRERGL 677
Y + N++ ++GQ ++ + M ER +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNI 259
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 150/695 (21%), Positives = 276/695 (39%), Gaps = 99/695 (14%)
Query: 10 LKNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLV--QTGQLSEARELFDQ 67
LK LS ++ K+S+ R+ + +PS Y I+ V + G + ++ E+F
Sbjct: 95 LKELSLMSGKSSFVFGALMTTYRLCNS--NPSV----YDILIRVYLREGMIQDSLEIFRL 148
Query: 68 MPYR----NTISSNVMISGYLKEGK----LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQ 119
M + + N ++ +K G+ S KE+ + + T+ +LI
Sbjct: 149 MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGS 208
Query: 120 FIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNS 179
F ++ L +M +SG P VT+ T+L K ++ H+ G D+ V N
Sbjct: 209 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 268
Query: 180 LIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
LI C+ + + L ++M +R + VTYN LI G++NEG A +L EM G
Sbjct: 269 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 328
Query: 236 FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEAR 295
+ TF NAL+D + EA
Sbjct: 329 LSPNHVTF-----------------------------------NALIDGHISEGNFKEAL 353
Query: 296 KLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
K+FY M E G++ + + GL K + F A +
Sbjct: 354 KMFYMM-EAKGLTPSEVSYGVLLDGLCKNA---------------EFDLARGFYMRMKRN 397
Query: 356 DLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WT 411
+ +GR I T + L N +D EA + ++S P ++
Sbjct: 398 GVCVGR------ITYTGMIDGLCKNGFLD---------EAVVLLNEMSKDGIDPDIVTYS 442
Query: 412 AMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRS 471
A+I+ + G F+ + ++ + R ++ + +++++ + + +++ +I
Sbjct: 443 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 502
Query: 472 GFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEAT 527
G + + LV K G + +A + + M N VS++ LI+ Y ++G+G
Sbjct: 503 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 562
Query: 528 LKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVD 587
+F+EM +G+ P ++ + G + E ++ S+ V V Y +++
Sbjct: 563 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT-VMYNTLLT 621
Query: 588 VLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNS-CRIHKNQDLAKRAAEQLFNMEVL 643
+C+SG KA L EM PD ++S+++ CR K A E VL
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 681
Query: 644 RDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
+ Y + + +AGQW++ ++ M G T
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 140/613 (22%), Positives = 251/613 (40%), Gaps = 47/613 (7%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPY----RNTISSNVMISGYL 84
I RI + G P+ + I + + G L EA +++ M R+ + NV+++
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519
Query: 85 KEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYV 140
K GK++ A+E M + N V++ LI GY S + ++AF +F M + G P +
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579
Query: 141 TFVTLLSG-CNDPKMIKG-LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
T+ +LL G C + + F H V D+ ++ N+L+ + CK + A L+
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT--VMYNTLLTAMCKSGNLAKAVSLFG 637
Query: 199 EMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF-----QAVLYA 249
EM QR DS TY +LI+G +G AI E G + + A
Sbjct: 638 EMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 250 GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG--- 306
G I F +Q+ ++ NA++D YS+ + + L +M +G
Sbjct: 698 GQWKAGIYFREQMDNLGHTP----DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 753
Query: 307 -VSYNMMITAYAWTGLIKESINLFRKLQFTKY--DRRNFPFATMLSLAANMLDLQMGRQL 363
+YN+++ Y+ + S L+R + D+ + +NML++ G ++
Sbjct: 754 LTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI--GLKI 811
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIF--VKLSSRCTVPWT-----AMISA 416
I + + N L+ +KC E F VK+ + + AM+S
Sbjct: 812 LKAFICRGVEVDRYTFNMLI---SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSS 476
+N F+ES + EM + ++ + + ++ + I + +I
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 928
Query: 477 IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGDGEATLKLFE 532
A SA+V AKCG +A + + M + +V S+ L+ NG+ L+L
Sbjct: 929 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 988
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRS 592
M G + D VS+ + T G + + M L + A I +L R
Sbjct: 989 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1048
Query: 593 GKFDKAEKLIAEM 605
F A+ ++ ++
Sbjct: 1049 TAFSGADIILKDL 1061
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/532 (23%), Positives = 217/532 (40%), Gaps = 86/532 (16%)
Query: 35 KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLS 90
K GF P + I DL + G+L +A ELFD+M R + N++I G+LKE
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 91 IAKEIFDSMVERNAV-----TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
A E++D ++E ++V T+ ++I G SK + + K++ RM ++ + D T+ +L
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
+ G D + V + + + V+ N+++ +C+ + + +L++ M ++S
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS 356
Query: 206 V---TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
V +YN LI G G EA ++ M G+ D +G I
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA---------------DKTTYGIFI 401
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
HG V N +V AL VE+ LD +Y +I +
Sbjct: 402 HGLCV------NGYVNKALGVMQE-----VESSG-----GHLDVYAYASIIDCLCKKKRL 445
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
+E+ NL +++ + G +L+S V NAL
Sbjct: 446 EEASNLVKEMS------------------------KHGVELNSH-----------VCNAL 470
Query: 383 VDMYAKCRRPEEAE---RIFVKLSSRCTV-PWTAMISANVQNGHFEESLKLFSEMRRDNV 438
+ + R EA R K R TV + +I + G F E+ EM +
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 439 TADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQ 498
D T++ +L I L +L ++SG + + + L+ G L DA+
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 499 IFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
+ M R N+V++N L+ + GD ++ M +G QPD +S+
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 21/245 (8%)
Query: 52 LVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIA----KEIFDSMVERN 103
L + +L EA L +M N+ N +I G +++ +L A +E+ +
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPT 498
Query: 104 AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVH 162
V+Y +LI G K+ +F EA M +G KPD T+ LL G C D K+ L H
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 163 SHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS----VTYNALIAGYANE 218
++ G ++ V++ N LI C + +D A + M R+ VTYN L+ G+
Sbjct: 559 -QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKV 617
Query: 219 GFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI------HGYAVKTTLI 272
G + A ++ M +G + ++ ++ +++ + HG T
Sbjct: 618 GDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG-IFPTVYT 676
Query: 273 WNVFV 277
WN+ V
Sbjct: 677 WNILV 681
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 378 VANALVDMYAKCRRPEEAERIFVKL-----SSRCTVPWTAMISANVQNGHFEESLKLFSE 432
VA +++ Y K P++A +F ++ + +++A V+ + + LF+
Sbjct: 80 VALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAY 139
Query: 433 MRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGS 492
V + T+ ++K S + ++ + GF +++ S +++ AK G
Sbjct: 140 FETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK 199
Query: 493 LKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVL-LGYQPDSVSFL 547
L DA+++F EM ER +V +N LI + D + ++L++ ++ P+ +
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 548 CVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREH----YASIVDVLCRSGKFDKAEKLIA 603
+ + S G V++ L+ + M + +RE Y+S++ LC +G DKAE +
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQ-----NEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 604 EM 605
E+
Sbjct: 315 EL 316
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 152/357 (42%), Gaps = 34/357 (9%)
Query: 342 FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVK 401
F ++T+++ A L +L + +V N L+D + K + + A ++ +
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 402 LSSRCTV-----PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLA 456
L +V MIS + G ++ LK++ M+++ D T++S++ +
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 457 SISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER---NVVSWNA 513
++ + + + + + + ++ + +CG +K+++++++ M + N+VS+N
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI 364
Query: 514 LISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVY 573
LI NG + ++ M GY D ++ G+ GL + K
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTY----------GIFIHGLCVNGYVNKAL 414
Query: 574 KLVPKREH---------YASIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNSCRIH 624
++ + E YASI+D LC+ + ++A L+ EM E+ S + N+
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN-SHVCNALIGG 473
Query: 625 KNQDLAKRAAEQLFNMEVLRDAA-PYVTMSNI----LAEAGQWESVGKVKKAMRERG 676
+D ++ F E+ ++ P V NI L +AG++ K M E G
Sbjct: 474 LIRD-SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/483 (21%), Positives = 213/483 (44%), Gaps = 55/483 (11%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLF 127
+ ++ N +++G+ ++S A + MVE ++ T+ LI G + ++ EA L
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
RM G +PD VT+ +++G I + + + + V+I N++ID+ C
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 188 HCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
V+ A L+ EM + + VTYN+LI N G +A +L +M + + TF
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
A++ A + + ++++ +K ++ ++F ++L++ + HD L EA+ +F M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 304 LDG----VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
D V+YN +I + + E + LFR++
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS-------------------------- 423
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMIS 415
R L + T L+ + + R + A+ +F ++ S +P ++ ++
Sbjct: 424 QRGLVGNTVTYT---------TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 416 ANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMS 475
NG E +L +F ++R + D T+ +++ + G L + G
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 476 SIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGDGEATLKLF 531
++ + ++ + + G ++A +F+EM E + ++N LI A+ +GD A+ +L
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 532 EEM 534
EM
Sbjct: 595 REM 597
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 227/546 (41%), Gaps = 88/546 (16%)
Query: 57 QLSEARELFDQM----PYRNTISSNVMISGYLKEGK----LSIAKEIFDSMVERNAVTYT 108
+L +A LF M P+ + + + ++S K K +S+ +++ + + N TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 109 LLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPK-------------- 153
+LI + + Q A + +M + G +PD VT +LL+G C+ +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 154 -----------MIKGLFQ----------VHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
+I GLF+ V VVK G ++ +++ CK +DL
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 193 ASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
A L K+M Q V YN +I N +A+ LF EM + G + T+ +++
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS 308
+ ++ ++ + NV +AL+D + K LVEA KL+ +M +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-----IK 354
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
++ + ++ LI F +DR L A +M +L + +
Sbjct: 355 RSIDPDIFTYSSLIN---------GFCMHDR--------LDEAKHMFELMISKDCFPN-- 395
Query: 369 VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANVQNGHFE 424
V+ N L+ + K +R +E +F ++S R TV +T +I Q +
Sbjct: 396 -------VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 425 ESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALV 484
+ +F +M D V D T++ +L N + + Y+ RS IY + ++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 485 DMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
+ K G ++D +F + + NVV++ ++S + G E LF EM G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 541 PDSVSF 546
PDS ++
Sbjct: 569 PDSGTY 574
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/560 (20%), Positives = 237/560 (42%), Gaps = 26/560 (4%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P V F LLS + + + LG + + LI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 182 DSYCKMHCVDLA----SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA +++ K + D VT N+L+ G+ + +A+ L +M ++G++
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 238 TSDFTFQAVLYA----GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
FTF +++ + +A ++ + L+ V N L L
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
+K+ E V YN +I A + +++NLF ++ + +++ N
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP---- 409
+L S I + V+ +AL+D + K + EAE+++ ++ R P
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
++++I+ + +E+ +F M + + T+ +++K + G +L +
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGDGE 525
+ G + + + L+ + + +A +FK+M V+ +++ L+ +NG E
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
L +FE + +PD ++ + G VE+G F S++ + + P Y ++
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTM 542
Query: 586 VDVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV 642
+ CR G ++A+ L EM + PD +++++ R H +AE + M
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI---RAHLRDGDKAASAELIREMRS 599
Query: 643 LR---DAAPYVTMSNILAEA 659
R DA+ ++N+L +
Sbjct: 600 CRFVGDASTIGLVTNMLHDG 619
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 187/440 (42%), Gaps = 24/440 (5%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKE 86
++V+ G+ P + N I L + + SEA L D+M + + ++ ++++G K
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 87 GKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
G + +A + M +E V Y +I +A LF M G +P+ VT+
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
+L+ + ++ S +++ + V+ ++LID++ K + A +LY EM +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
R D TY++LI G+ EA +F M + T+ ++ +
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 259 GQQIHGYAVKTTLIWNVFVGNALL-DFYSKHDCLVEARKLFYKMPELDGV-----SYNMM 312
G ++ + L+ N L+ F+ +C + ++ +K DGV +Y+++
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQAREC--DNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
+ G ++ ++ +F LQ +K + + + M+ ++ G L +
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLK 428
V+ ++ + + EEA+ +F ++ +P + +I A++++G S +
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 429 LFSEMRRDNVTADQATFASV 448
L EMR D +T V
Sbjct: 593 LIREMRSCRFVGDASTIGLV 612
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 17/274 (6%)
Query: 414 ISANVQNG-HFEESLKLFSEMRRDNVTADQATFASVLKASANLAS----ISLGKQLHSYI 468
IS N N ++++ LF +M + F+ +L A A + ISLG+Q+ +
Sbjct: 52 ISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL- 110
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP----ERNVVSWNALISAYASNGDG 524
G ++Y S L++ + + L A+ + +M E ++V+ N+L++ +
Sbjct: 111 ---GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
+ L +MV +GYQPDS +F + E + + M V P Y
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGI 226
Query: 585 IVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
+V+ LC+ G D A L+ +M +P +++++I+++ +KN + A ++ N
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRER 675
+ + Y ++ L G+W ++ M ER
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/420 (19%), Positives = 175/420 (41%), Gaps = 47/420 (11%)
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNM 311
I+ G+Q+ + N++ + L++ + + L A + KM +L D V+ N
Sbjct: 101 ISLGEQMQNLGIS----HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS 156
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
++ + I ++++L ++ Y +F F T++ G H++A
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH----------GLFRHNRA---- 202
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
SE A ALVD R+ VK V + +++ + G + +L L
Sbjct: 203 --SE---AVALVD------------RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+M + + + +++ A N +++ L + + G ++ ++L+ G
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 492 SLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
DA ++ +M ER NVV+++ALI A+ G KL++EM+ PD ++
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 548 CVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP- 606
+ ++E F M P Y +++ C++ + D+ +L EM
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMIS-KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 607 --FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWES 664
+ + ++++++ + D A+ +Q+ + VL D Y + + L G+ E+
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 184/427 (43%), Gaps = 47/427 (11%)
Query: 35 KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLS 90
+ G P++ I L + +L+EA E F +M + +T+ +I G+ K G +
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 91 IAKEIFDSMVERN----AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
A + F M R+ +TYT +I G+ + +EA KLF M G +PD VTF L+
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM----PQ 202
+G +K F+VH+H+++ G V+ +LID CK +D A++L EM Q
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
+ TYN+++ G G +EA+KL E G T+ ++ A ++ Q+I
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
+ L + N L++ + H L + KL M ++ + A + L+
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-----LAKGIAPNATTFNSLV 1046
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
K+ Y RN +L+ ++ + L
Sbjct: 1047 KQ------------YCIRN--------------NLKAATAIYKDMCSRGVGPDGKTYENL 1080
Query: 383 VDMYAKCRRPEEAERIFVKLSSR----CTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
V + K R +EA +F ++ + ++ +I ++ F E+ ++F +MRR+ +
Sbjct: 1081 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Query: 439 TADQATF 445
AD+ F
Sbjct: 1141 AADKEIF 1147
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 168/402 (41%), Gaps = 57/402 (14%)
Query: 273 WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-----VSYNMMITAYAWTGLIKESIN 327
WNV N ++ F + + EA L M EL G +SY+ ++ Y G + +
Sbjct: 687 WNVASYNIVIHFVCQLGRIKEAHHLLLLM-ELKGYTPDVISYSTVVNGYCRFGELDKVWK 745
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
L ++ ++ + +++ L + L + S+ I + +V L+D +
Sbjct: 746 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805
Query: 388 KCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQA 443
K A + F ++ SR P +TA+IS Q G E+ KLF EM + D
Sbjct: 806 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 444 TFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
TF ++ + ++H+++I++G ++ + L+D K G L A ++ EM
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Query: 504 ----PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLV 559
+ N+ ++N++++ +G+ E +KL E G D+V+
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT-------------- 971
Query: 560 EEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSS 616
Y +++D C+SG+ DKA++++ EM P + ++
Sbjct: 972 ----------------------YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
++N +H + E+L N + + AP T N L +
Sbjct: 1010 LMNGFCLHGMLE----DGEKLLNWMLAKGIAPNATTFNSLVK 1047
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 199/453 (43%), Gaps = 26/453 (5%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLF 127
N S N++I + G++ A + M + + ++Y+ ++ GY + + + +KL
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 128 VRMCRSGTKPD---YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
M R G KP+ Y + + LL C K+ + + S +++ G ++ +LID +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLL--CRICKLAEAE-EAFSEMIRQGILPDTVVYTTLIDGF 804
Query: 185 CKMHCVDLASQLYKEMPQRD----SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
CK + AS+ + EM RD +TY A+I+G+ G EA KLF EM G E
Sbjct: 805 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 864
Query: 241 FTFQAVL--YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLF 298
TF ++ Y G AF ++H + ++ NV L+D K L A +L
Sbjct: 865 VTFTELINGYCKAGHMKDAF--RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 922
Query: 299 YKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANM 354
++M ++ + +YN ++ +G I+E++ L + + + + T++
Sbjct: 923 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
++ +++ + + ++ N L++ + E+ E++ + ++ P
Sbjct: 983 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042
Query: 415 SANVQNGHFEESLK----LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
++ V+ +LK ++ +M V D T+ +++K ++ L +
Sbjct: 1043 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 1102
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
GF S+ S L+ + K +A ++F +M
Sbjct: 1103 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/449 (17%), Positives = 189/449 (42%), Gaps = 31/449 (6%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCND--PKMIKGLFQVHSHVVKLGHDSAVIIC-- 177
EA ++F +M G V + CN ++ K ++ + ++ V +C
Sbjct: 636 EARRVFEKMLNYG-------LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN 688
Query: 178 ----NSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFM 229
N +I C++ + A L M + D ++Y+ ++ GY G + KL
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 230 EMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
M+ G + + + + +++ + +A ++ ++ ++ + V L+D + K
Sbjct: 749 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808
Query: 290 CLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
+ A K FY+M D ++Y +I+ + G + E+ LF ++ + + F
Sbjct: 809 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
+++ ++ ++H+ I V+ L+D K + A + ++
Sbjct: 869 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 928
Query: 406 CTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
P + ++++ ++G+ EE++KL E + AD T+ +++ A +
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISA 517
+++ ++ G +I + L++ + G L+D ++ M + N ++N+L+
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSF 546
Y + +A ++++M G PD ++
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVGPDGKTY 1077
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 12/227 (5%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM----PYRNTISSNVMISGYLKEGK 88
+++ G P+ I L + G L A EL +M N + N +++G K G
Sbjct: 890 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 949
Query: 89 LSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
+ A ++ + + VTYT L+ Y KS + +A ++ M G +P VTF
Sbjct: 950 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR- 203
L++G M++ ++ + ++ G NSL+ YC + + A+ +YK+M R
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 204 ---DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
D TY L+ G+ KEA LF EM+ GF S T+ ++
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 184/427 (43%), Gaps = 47/427 (11%)
Query: 35 KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLS 90
+ G P++ I L + +L+EA E F +M + +T+ +I G+ K G +
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 91 IAKEIFDSMVERN----AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
A + F M R+ +TYT +I G+ + +EA KLF M G +PD VTF L+
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM----PQ 202
+G +K F+VH+H+++ G V+ +LID CK +D A++L EM Q
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 931
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
+ TYN+++ G G +EA+KL E G T+ ++ A ++ Q+I
Sbjct: 932 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 991
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
+ L + N L++ + H L + KL M ++ + A + L+
Sbjct: 992 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-----LAKGIAPNATTFNSLV 1046
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
K+ Y RN +L+ ++ + L
Sbjct: 1047 KQ------------YCIRN--------------NLKAATAIYKDMCSRGVGPDGKTYENL 1080
Query: 383 VDMYAKCRRPEEAERIFVKLSSR----CTVPWTAMISANVQNGHFEESLKLFSEMRRDNV 438
V + K R +EA +F ++ + ++ +I ++ F E+ ++F +MRR+ +
Sbjct: 1081 VKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
Query: 439 TADQATF 445
AD+ F
Sbjct: 1141 AADKEIF 1147
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 168/402 (41%), Gaps = 57/402 (14%)
Query: 273 WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-----VSYNMMITAYAWTGLIKESIN 327
WNV N ++ F + + EA L M EL G +SY+ ++ Y G + +
Sbjct: 687 WNVASYNIVIHFVCQLGRIKEAHHLLLLM-ELKGYTPDVISYSTVVNGYCRFGELDKVWK 745
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
L ++ ++ + +++ L + L + S+ I + +V L+D +
Sbjct: 746 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805
Query: 388 KCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQA 443
K A + F ++ SR P +TA+IS Q G E+ KLF EM + D
Sbjct: 806 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 444 TFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
TF ++ + ++H+++I++G ++ + L+D K G L A ++ EM
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Query: 504 ----PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLV 559
+ N+ ++N++++ +G+ E +KL E G D+V+
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT-------------- 971
Query: 560 EEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSS 616
Y +++D C+SG+ DKA++++ EM P + ++
Sbjct: 972 ----------------------YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009
Query: 617 ILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAE 658
++N +H + E+L N + + AP T N L +
Sbjct: 1010 LMNGFCLHGMLE----DGEKLLNWMLAKGIAPNATTFNSLVK 1047
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 199/453 (43%), Gaps = 26/453 (5%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLF 127
N S N++I + G++ A + M + + ++Y+ ++ GY + + + +KL
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 128 VRMCRSGTKPD---YVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSY 184
M R G KP+ Y + + LL C K+ + + S +++ G ++ +LID +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLL--CRICKLAEAE-EAFSEMIRQGILPDTVVYTTLIDGF 804
Query: 185 CKMHCVDLASQLYKEMPQRD----SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSD 240
CK + AS+ + EM RD +TY A+I+G+ G EA KLF EM G E
Sbjct: 805 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 864
Query: 241 FTFQAVL--YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLF 298
TF ++ Y G AF ++H + ++ NV L+D K L A +L
Sbjct: 865 VTFTELINGYCKAGHMKDAF--RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 922
Query: 299 YKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANM 354
++M ++ + +YN ++ +G I+E++ L + + + + T++
Sbjct: 923 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982
Query: 355 LDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMI 414
++ +++ + + ++ N L++ + E+ E++ + ++ P
Sbjct: 983 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1042
Query: 415 SANVQNGHFEESLK----LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
++ V+ +LK ++ +M V D T+ +++K ++ L +
Sbjct: 1043 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 1102
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
GF S+ S L+ + K +A ++F +M
Sbjct: 1103 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/449 (17%), Positives = 189/449 (42%), Gaps = 31/449 (6%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCND--PKMIKGLFQVHSHVVKLGHDSAVIIC-- 177
EA ++F +M G V + CN ++ K ++ + ++ V +C
Sbjct: 636 EARRVFEKMLNYG-------LVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWN 688
Query: 178 ----NSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFM 229
N +I C++ + A L M + D ++Y+ ++ GY G + KL
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 230 EMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHD 289
M+ G + + + + +++ + +A ++ ++ ++ + V L+D + K
Sbjct: 749 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808
Query: 290 CLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
+ A K FY+M D ++Y +I+ + G + E+ LF ++ + + F
Sbjct: 809 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 868
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
+++ ++ ++H+ I V+ L+D K + A + ++
Sbjct: 869 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 928
Query: 406 CTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
P + ++++ ++G+ EE++KL E + AD T+ +++ A +
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISA 517
+++ ++ G +I + L++ + G L+D ++ M + N ++N+L+
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSF 546
Y + +A ++++M G PD ++
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVGPDGKTY 1077
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 12/227 (5%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM----PYRNTISSNVMISGYLKEGK 88
+++ G P+ I L + G L A EL +M N + N +++G K G
Sbjct: 890 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 949
Query: 89 LSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
+ A ++ + + VTYT L+ Y KS + +A ++ M G +P VTF
Sbjct: 950 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR- 203
L++G M++ ++ + ++ G NSL+ YC + + A+ +YK+M R
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 204 ---DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
D TY L+ G+ KEA LF EM+ GF S T+ ++
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 214/500 (42%), Gaps = 31/500 (6%)
Query: 34 VKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKL 89
V + F SN + +V+TG+L E + + M Y + I +I G+ + GK
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 90 SIAKEIFDSMVERNAV----TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
A +I + + AV TY ++I GY K+ + A + RM S PD VT+ T+
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTI 210
Query: 146 LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR-- 203
L D +K +V +++ VI LI++ C+ V A +L EM R
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 204 --DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
D VTYN L+ G EG EAIK +M G + + T +L + ++
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP----ELDGVSYNMMITAYA 317
+ ++ +V N L++F + L A + KMP + + +SYN ++ +
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFP----FATMLSLAANMLDLQMGRQLHSQAIVTTAD 373
+ +I ++ R +P + TML+ ++ ++ +Q
Sbjct: 391 KEKKMDRAIEYLERM----VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 374 SEVLVANALVDMYAKCRRPEEAERIFVKLSSR----CTVPWTAMISANVQNGHFEESLKL 429
++ N ++D AK + +A ++ ++ ++ T+ +++++ + G +E++K
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 430 FSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAK 489
F E R + + TF S++ ++I G + + + L++ A
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 490 CGSLKDAIQIFKEMPERNVV 509
G K+A+++ E+ + ++
Sbjct: 567 EGMAKEALELLNELCNKGLM 586
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 152/335 (45%), Gaps = 31/335 (9%)
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFT----KYDR--RNFPFATMLSLAANMLDLQ 358
D ++YN+MI+ Y G I ++++ ++ + Y+ R+ + L A +LD
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 359 MGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE--EAERIFVKLSSR-CT---VPWTA 412
+ R + I T + + A CR A ++ ++ R CT V +
Sbjct: 231 LQRDCYPDVITYT-----------ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
+++ + G +E++K ++M + T +L++ + ++L + ++R G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATL 528
F S+ + L++ + G L AI I ++MP+ N +S+N L+ + + +
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 529 KLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDV 588
+ E MV G PD V++ + TA G VE+ + N ++ P Y +++D
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDG 458
Query: 589 LCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNS 620
L ++GK KA KL+ EM PD I +SS++
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 41/228 (17%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKE 86
A +++ GF PS N I L + G L A ++ ++MP N++S N ++ G+ KE
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 87 GKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
K+ A E + MV R G PD VT+ T+L
Sbjct: 393 KKMDRAIEYLERMVSR-------------------------------GCYPDIVTYNTML 421
Query: 147 SG-CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR-- 203
+ C D K ++ ++ + + G +I N++ID K A +L EM +
Sbjct: 422 TALCKDGK-VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 204 --DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
D++TY++L+ G + EG EAIK F E +G + TF +++
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 139/686 (20%), Positives = 292/686 (42%), Gaps = 92/686 (13%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQM---------PYRNTISSNVMISGYLKEG 87
GF+ + NY + ++ ++ A + F M PY N + S+++ S + E
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDE- 222
Query: 88 KLSIAKEIFDSMV----ERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF- 142
AKEI++ MV + VT LL+ + + EA K+F R+ G +PD + F
Sbjct: 223 ----AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFS 278
Query: 143 VTLLSGCNDPKMIKGL-----------------------------------FQVHSHVVK 167
+ + + C P ++ L +V +V
Sbjct: 279 LAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVG 338
Query: 168 LGHDSAVIICNSLIDSYCKMH----CVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKE 223
G +VI SL++ YCK + +DL +++ +E D V ++ ++ + ++
Sbjct: 339 FGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEK 398
Query: 224 AIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLD 283
AI+ +M M+ + S ++ + + +I + ++ I + F+ N +
Sbjct: 399 AIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFES-WIAHGFMCNKIFL 457
Query: 284 FYSKHDCLVEARKLFYKMPELDGVS-----YNMMITAYAWTGLIKESINLFRKLQFTKYD 338
+ K V+A F KM E G+ YN M+ A+ + + ++F ++ +
Sbjct: 458 LFCKQGK-VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLE 516
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
NF ++ ++ D Q + +Q + ++ ++ N +++ K + +A+ +
Sbjct: 517 PNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEM 576
Query: 399 FVKL------SSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKAS 452
L S CT + ++I V+ G + +++ + EM + + + TF S++
Sbjct: 577 LQNLIKEKRYSMSCT-SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 453 ANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE----RNV 508
+ L ++ + + A AL+D + K +K A +F E+PE NV
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNV 695
Query: 509 VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNS 568
+N+LIS + + G +A + L+++MV G D ++ + GL+++G N
Sbjct: 696 SVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID-----GLLKDG--NINL 748
Query: 569 MTKVYK------LVPKREHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILN 619
+ +Y +VP + +V+ L + G+F KA K++ EM P+ +++S+++
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Query: 620 SCRIHKNQDLAKRAAEQLFNMEVLRD 645
N + A R +++ ++ D
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHD 834
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/544 (19%), Positives = 235/544 (43%), Gaps = 40/544 (7%)
Query: 35 KTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM-----PYRNTISSNVMISGYLKEGKL 89
K G S I+ V+ G + EA + D+M P + I++ +++GY K +L
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM-SVIAATSLVNGYCKGNEL 361
Query: 90 SIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
A ++F+ M E + V +++++ + K+ + +A + ++RM P V T+
Sbjct: 362 GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421
Query: 146 LSGCNDPKMIKGLFQVHSHVVK--LGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR 203
+ GC + + ++ + + + H +CN + +CK VD A+ K M Q+
Sbjct: 422 IQGCLKAESPEAALEIFNDSFESWIAHG---FMCNKIFLLFCKQGKVDAATSFLKMMEQK 478
Query: 204 ----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFG 259
+ V YN ++ + A +F EM + G E ++FT+ ++ D
Sbjct: 479 GIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNA 538
Query: 260 QQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE-----LDGVSYNMMIT 314
+ + N + N +++ K +A+++ + + + SYN +I
Sbjct: 539 WDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIID 598
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS--LAANMLDL--QMGRQLHSQAIVT 370
+ G ++ +R++ F ++++ +N +DL +M ++ S +
Sbjct: 599 GFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL-- 656
Query: 371 TADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEES 426
++ AL+D + K + A +F +L +P + ++IS G + +
Sbjct: 657 --KLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 427 LKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
+ L+ +M D ++ D T+ +++ +I+L L+S ++ G + LV+
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 487 YAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPD 542
+K G A ++ +EM ++ NV+ ++ +I+ + G+ +L +EM+ G D
Sbjct: 775 LSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Query: 543 SVSF 546
F
Sbjct: 835 DTVF 838
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 79 MISGYLKEGKLSIAKEIFDSMVE----RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSG 134
+I G+ K+ + A +F + E N Y LI G+ + A L+ +M G
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG 725
Query: 135 TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLAS 194
D T+ T++ G I ++S ++ LG I+ L++ K AS
Sbjct: 726 ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKAS 785
Query: 195 QLYKEMPQRDS----VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
++ +EM ++D + Y+ +IAG+ EG EA +L EM + G D F ++
Sbjct: 786 KMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 209/488 (42%), Gaps = 47/488 (9%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMV----ERNAVTYTLLIGGYSKSDQFIEAFKLF 127
N + N++I+ + + ++S+A + M+ E + VT + L+ GY + +A L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
+M G +PD +TF TL+ G + +V+ G ++ +++ CK
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 188 HCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
+DLA L +M + + V Y+ +I +A+ LF EM + G + T+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
+++ + + ++ ++ + NV NAL+D + K LVEA KL+ +M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM-- 356
Query: 304 LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQL 363
+ ++ + ++ LI F +DR L A +M +L + +
Sbjct: 357 ---IKRSIDPDIFTYSSLIN---------GFCMHDR--------LDEAKHMFELMISKDC 396
Query: 364 HSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANVQ 419
V+ N L++ + K +R +E +F ++S R TV +T +I Q
Sbjct: 397 FPN---------VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYA 479
+ + +F +M D V + T+ ++L + + Y+ RS +IY
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 480 GSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMV 535
+ +++ K G ++D +F + + +V+ +N +IS + G E LF +M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 536 LLGYQPDS 543
G PDS
Sbjct: 568 EDGPLPDS 575
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 208/491 (42%), Gaps = 60/491 (12%)
Query: 11 KNLSSLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM-- 68
K LS++A + V + + ++ + G + N I + Q+S A L +M
Sbjct: 90 KLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 69 ----PYRNTISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQF 120
P T+SS +++GY ++S A + D MVE + +T+T LI G ++
Sbjct: 149 LGYEPSIVTLSS--LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 121 IEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSL 180
EA L RM + G +P+ VT+ +++G I F + + + ++ V+I +++
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 181 IDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGF 236
IDS CK D A L+ EM + + +TY++LI+ N +A +L +M +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 237 ETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARK 296
+ TF A++ A + + ++++ +K ++ ++F ++L++ + HD L EA+
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 297 LFYKMPELDG----VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
+F M D V+YN +I + I E + LFR++ + T++
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAK------------------------ 388
D + + Q + ++ N L+D K
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 389 ---------CR--RPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEM 433
C+ + E+ +F LS + P + MIS + G EE+ LF +M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 434 RRDNVTADQAT 444
R D D T
Sbjct: 567 REDGPLPDSGT 577
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 219/514 (42%), Gaps = 32/514 (6%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P F LLS K + + + +LG + N LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 182 DSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA L +M + VT ++L+ GY + +A+ L +M ++G+
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 238 TSDFTFQAVLYAGIGLDD-----IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
TF +++ G+ L + +A ++ + L+ V N L K +
Sbjct: 188 PDTITFTTLIH-GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL----CKRGDID 242
Query: 293 EARKLFYKMPELDGVSYNMMITAYAWTGLIK-----ESINLFRKLQFTKYDRRNFPFATM 347
A L KM E + N++I + L K +++NLF +++ ++++
Sbjct: 243 LAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT 407
+S N +L S I + V+ NAL+D + K + EAE+++ ++ R
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 408 VP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
P ++++I+ + +E+ +F M + + T+ +++ I G +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYA 519
L + + G + + + L+ + + +A +FK+M N++++N L+
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 520 SNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR 579
NG E + +FE + +P ++ + G VE+G F S++ + + P
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS-LKGVKPDV 540
Query: 580 EHYASIVDVLCRSGKFDKAEKLIAEMPFD---PD 610
Y +++ CR G ++A+ L +M D PD
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/447 (19%), Positives = 182/447 (40%), Gaps = 24/447 (5%)
Query: 236 FETSDFTFQAVLYAGI---GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLV 292
F + ++ +L G+ LDD A G + G VK+ + ++F N LL +K
Sbjct: 46 FSSGSGDYREILRNGLHSMKLDD-AIG--LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 293 EARKLFYKMPELDGVS-----YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
L KM L G+S YN++I + I ++ L K+ Y+ +++
Sbjct: 103 LVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSL 161
Query: 348 LSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT 407
L+ + + L Q + + + L+ + EA + ++ R
Sbjct: 162 LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 408 VP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQ 463
P + +++ + G + + L ++M + A+ +++V+ +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 464 LHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYA 519
L + + G ++ S+L+ DA ++ +M ER NVV++NALI A+
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 520 SNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKR 579
G KL++EM+ PD ++ + ++E F M P
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS-KDCFPNV 400
Query: 580 EHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQ 636
Y ++++ C++ + D+ +L EM + + ++++++ ++ D A+ +Q
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 637 LFNMEVLRDAAPYVTMSNILAEAGQWE 663
+ + V + Y T+ + L + G+ E
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLE 487
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 154/673 (22%), Positives = 271/673 (40%), Gaps = 108/673 (16%)
Query: 52 LVQTGQLSEAREL----------FDQMPYRNTISSNVMISGYLKEGKLSIA----KEIFD 97
L Q G++ E R+L FD + Y N I GY K G L A +E+ +
Sbjct: 217 LCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN------WIHGYFKGGALVDALMQDREMVE 270
Query: 98 SMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKG 157
+ R+ V+Y++LI G SK EA L +M + G +P+ +T+ ++ G ++
Sbjct: 271 KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEE 330
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIA 213
F + + ++ +G + + +LID C+ ++ A + +M QR +TYN +I
Sbjct: 331 AFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN 390
Query: 214 GYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIW 273
G G EA ++ G T+ +L + I + +I +I ++ +
Sbjct: 391 GLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM 445
Query: 274 NVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLF 329
++ + N LL + EA L+ MPE+ D +Y MI Y TG I+E++ +F
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 330 RKLQFTK------YDR--RNFPFATMLSLAANM----------LDLQMGRQLHSQAIVTT 371
+L+ + Y+R ML A + LD+ R L
Sbjct: 506 NELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
D +L LV + S C I + G FE +++++
Sbjct: 566 GDKGIL---GLVYGLEQLN------------SDVCLGMLNDAILLLCKRGSFEAAIEVYM 610
Query: 432 EMRRDNVTADQATFAS-VLKASA-NLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAK 489
MRR +T TF S +LK NL S L +Y++ + AG
Sbjct: 611 IMRRKGLT---VTFPSTILKTLVDNLRS------LDAYLL------VVNAGET------- 648
Query: 490 CGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCV 549
+ +V+ + +I+ G L L G +++++ +
Sbjct: 649 ------------TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSL 696
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---P 606
G + E LR F+S+ + LVP Y ++D LC+ G F AEKL+ M
Sbjct: 697 INGLCQQGCLVEALRLFDSLENI-GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG 755
Query: 607 FDPDEIMWSSILNS-CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESV 665
P+ I+++SI++ C++ + +D A R + V DA +M + G E
Sbjct: 756 LVPNIIIYNSIVDGYCKLGQTED-AMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Query: 666 GKVKKAMRERGLT 678
V +++ ++
Sbjct: 815 LSVFTEFKDKNIS 827
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 134/623 (21%), Positives = 249/623 (39%), Gaps = 69/623 (11%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSN----VMISGYLKE 86
+++K G +P+ I L + G+L EA LF+++ +I G ++
Sbjct: 301 GKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRK 360
Query: 87 GKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
G L+ A + M +R + +TY +I G + + EA ++ G D +T+
Sbjct: 361 GNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITY 415
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
TLL + I + ++ ++ +++CN L+ ++ M A LY+ MP+
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI------- 251
D+ TY +I GY G +EA+++F E+R AV Y I
Sbjct: 476 MDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA------AVCYNRIIDALCKK 529
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-VSYN 310
G+ D A I + + L ++ LL + L Y + +L+ V
Sbjct: 530 GMLDTATEVLIELW--EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLG 587
Query: 311 MM---ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
M+ I G + +I ++ ++ K FP + +L N+ R L +
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMR-RKGLTVTFPSTILKTLVDNL------RSLDAYL 640
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC-----------TVPWTAMISA 416
+V A L + ++D Y E VK + C T+ + ++I+
Sbjct: 641 LVVNAGETTLSSMDVID-YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLING 699
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSS 476
Q G E+L+LF + + + T+ ++ ++L ++ G + +
Sbjct: 700 LCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPN 759
Query: 477 IYAGSALVDMYAKCGSLKDAIQIF-KEMPER---NVVSWNALISAYASNGDGEATLKLFE 532
I +++VD Y K G +DA+++ ++M R + + +++I Y GD E L +F
Sbjct: 760 IIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFT 819
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEEG---LRYFNSMTKVYKLVPK-------REHY 582
E D FL + G +EE LR V KL+ + E
Sbjct: 820 EFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESI 879
Query: 583 ASIVDVLCRSGKFDKAEKLIAEM 605
+ LC G+ +A K++ E+
Sbjct: 880 RGFLVELCEQGRVPQAIKILDEI 902
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 411 TAMISANVQNGHFEESLKLF-SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
+A+IS + G E +L F S + + + T+ +++ A L + + L +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE----RNVVSWNALISAYASNGDGE 525
GF S + Y K G+L DA+ +EM E R+VVS++ LI + G+ E
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
L L +M+ G +P+ +++ + G +EE FN + V V + Y ++
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF-LYVTL 353
Query: 586 VDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSC----RIHKNQDLAKRAAEQLF 638
+D +CR G ++A ++ +M P + +++++N R+ + +++K +
Sbjct: 354 IDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVI 413
Query: 639 NMEVLRDAAPYVTMSNI 655
L D+ Y+ + NI
Sbjct: 414 TYSTLLDS--YIKVQNI 428
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 146/706 (20%), Positives = 269/706 (38%), Gaps = 128/706 (18%)
Query: 40 PSTSRSNYQIMDLVQTGQLSEARELFDQM-------PYRNTISSNVMISGYLKEGKLSIA 92
PS+ I V+ G++ A E+ + M P+ N + S V ISG+ K GK +A
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAV-ISGFCKIGKPELA 190
Query: 93 KEIFDSMVER-----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
F+S V+ N VTYT L+ + + E L R+ G + D V + +
Sbjct: 191 LGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 148 G-CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD----LASQLYKEMPQ 202
G ++ L Q V K G + V+ + LID K V+ L ++ KE +
Sbjct: 251 GYFKGGALVDALMQDREMVEK-GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 203 RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
+ +TY A+I G G +EA LF + +G E +F + + I
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTL---------------I 354
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
G K GN F D +E R + P + ++YN +I G +
Sbjct: 355 DGICRK---------GNLNRAFSMLGD--MEQRGI---QPSI--LTYNTVINGLCMAGRV 398
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
E+ + + + ++T+L + ++ ++ + + ++++ N L
Sbjct: 399 SEADEVSKGVVGDV-----ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNIL 453
Query: 383 VDMYAKCRRPEEAERIFVKLSSRCTVPWTA----MISANVQNGHFEESLKLFSEMRRDNV 438
+ + EA+ ++ + P TA MI + G EE+L++F+E+R+ +V
Sbjct: 454 LKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV 513
Query: 439 TA-----------------DQATFASVLKASANL-----ASISLGKQLHSYIIRSGFMSS 476
+A D AT + L S +L +H+ G +
Sbjct: 514 SAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGL 573
Query: 477 IYAGSAL------------VDMYAKCGSLKDAIQIFKEMPERN--VVSWNALISAYASN- 521
+Y L + + K GS + AI+++ M + V + ++ N
Sbjct: 574 VYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNL 633
Query: 522 ----------GDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
GE TL D + + + G + + L S K
Sbjct: 634 RSLDAYLLVVNAGETTLS----------SMDVIDYTIIINGLCKEGFLVKALN-LCSFAK 682
Query: 572 VYKLVPKREHYASIVDVLCRSGKFDKAEKL---IAEMPFDPDEIMWSSIL-NSCRIHKNQ 627
+ Y S+++ LC+ G +A +L + + P E+ + ++ N C+
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFL 742
Query: 628 DLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMR 673
D AE+L + V + P + + N + + + +G+ + AMR
Sbjct: 743 D-----AEKLLDSMVSKGLVPNIIIYNSIVDG--YCKLGQTEDAMR 781
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 138/680 (20%), Positives = 280/680 (41%), Gaps = 108/680 (15%)
Query: 100 VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF 159
+ + ++T+LI + + + A + +M + G +P VTF +LL G I F
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGY 215
+ +VK G++ V++ N+LID CK +++A +L EM ++ D VTYN L+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 216 ANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNV 275
G +A ++ +M TF A++ + ++ Q+++ +++++ N
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 276 FVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRK 331
N++++ H L +A+K F M + V+YN +I+ + ++ E + LF++
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 332 LQFTKYDRRNFPFATM---------LSLAANMLDLQMGRQ-----------LHSQAIVTT 371
+ ++ F + T+ L +A ++ + R+ LH +
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 372 ADSE---------------VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTA 412
+S ++ N ++ K + E+A +F +L P +T
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTAD-QATFASVLKASANLASISLGK--------- 462
MI +NG E+ +L M+ + + A + + S++ ISLG
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLGSAQSLREIWE 521
Query: 463 -------------------------QLHSYIIRSG-----FMSSIYAGSALVDMYAK--- 489
+ H ++ G +S ++G++ Y +
Sbjct: 522 RSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLR 581
Query: 490 ----CGSLKDAIQIFKEM----PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
C DA +F EM P ++V + +++ A + + L+ +M LG
Sbjct: 582 NELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISH 641
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
D SF + + L M K+ P S+++ C+ +F +A L
Sbjct: 642 DLYSFTILIHCFCRCSRLSLALALLGKMMKL-GFRPSIVTLGSLLNGFCQGNRFQEAVSL 700
Query: 602 IAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME---VLRDAAPYVTMSNI 655
+ M F P+ +++++++N + KN+DL A E + ME + DA Y T+ +
Sbjct: 701 VDSMDGFGFVPNVVIYNTVING--LCKNRDL-NNALEVFYCMEKKGIRADAVTYNTLISG 757
Query: 656 LAEAGQWESVGKVKKAMRER 675
L+ +G+W ++ + M +R
Sbjct: 758 LSNSGRWTDAARLLRDMVKR 777
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 157/751 (20%), Positives = 297/751 (39%), Gaps = 97/751 (12%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGK 88
+VK+G++P+ N I L + G+L+ A EL ++M + + ++ N +++G G+
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 89 LSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
S A + M++R + VT+T LI + K EA +L+ M +S P+ VT+ +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP--- 201
+++G + + + G V+ N+LI +CK VD +L++ M
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 202 -QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
D TYN LI GY G + A+ +F M T D +L G+ ++
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV-TPDIITHCILLHGLCVNG----- 400
Query: 261 QIHGYAVK------TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP----ELDGVSYN 310
+I VK + + N ++ K D + +A +LF ++P + D +Y
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 311 MMITAYAWTGLIKESINLFRKLQFTKYD-RRNFPFATMLSLAANMLDLQMGRQLHSQAIV 369
+MI G +E+ L R+++ + N + +++ ++ +G + I
Sbjct: 461 IMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLGSAQSLREIW 520
Query: 370 TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAM---ISANVQNGHFEES 426
+ S L+ + R ++ L R P T++ S + H+ E
Sbjct: 521 ERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLL-ERGNNPETSLSRSFSGASHHHHYRER 579
Query: 427 LK-------------LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
L+ LF EM + F VL A + + L+ + G
Sbjct: 580 LRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGI 639
Query: 474 MSSIYAGSALVDMYAKCG-----------------------------------------S 492
+Y+ + L+ + +C S
Sbjct: 640 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 699
Query: 493 LKDAIQIFKEMPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
L D++ F +P NVV +N +I+ N D L++F M G + D+V++ + +
Sbjct: 700 LVDSMDGFGFVP--NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 757
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDP 609
S+ G + R M K K+ P + +++D + G +A L EM P
Sbjct: 758 LSNSGRWTDAARLLRDMVK-RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 816
Query: 610 DEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVK 669
+ ++S++N IH AK + + + D Y T+ ++ + E K+
Sbjct: 817 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 876
Query: 670 KAMRERGLTKVPAYSWVEIKHKVHIFCANDK 700
M +GL A+++ + +H +C K
Sbjct: 877 CEMTYQGLVG-DAFTYNTL---IHGYCQAGK 903
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 141/335 (42%), Gaps = 16/335 (4%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMP----YRNTISSNVMISGYLKE 86
+++K GF PS + Q + EA L D M N + N +I+G K
Sbjct: 667 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 726
Query: 87 GKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
L+ A E+F M + +AVTY LI G S S ++ +A +L M + P+ + F
Sbjct: 727 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 786
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
L+ + ++ +++ V NSLI+ +C C+ A ++ M
Sbjct: 787 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 846
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
+ D VTYN LI G+ ++ +KLF EM G FT+ +++ +
Sbjct: 847 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 906
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHD----CLVEARKLFYKMPELDGVSYNMMIT 314
Q++ V + ++ N LLD + LV L ++D ++YN++I
Sbjct: 907 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 966
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
T +KE+ LFR L + TM+S
Sbjct: 967 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 1001
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 191/431 (44%), Gaps = 18/431 (4%)
Query: 63 ELFDQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSD 118
E+ P + + +++ K K I ++ M + + ++T+LI + +
Sbjct: 598 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 657
Query: 119 QFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKLGHDSAVIIC 177
+ A L +M + G +P VT +LL+G C + + + V S + G V+I
Sbjct: 658 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS-MDGFGFVPNVVIY 716
Query: 178 NSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRD 233
N++I+ CK ++ A +++ M ++ D+VTYN LI+G +N G +A +L +M
Sbjct: 717 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 776
Query: 234 LGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
+ + F A++ + ++ + ++ ++ +++ NVF N+L++ + H CL +
Sbjct: 777 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 836
Query: 294 ARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
A+ +F M D V+YN +IT + + +++ + LF ++ + F + T++
Sbjct: 837 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 896
Query: 350 LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR---- 405
L + +++ ++ + +++ N L+D + E+A + L
Sbjct: 897 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 956
Query: 406 CTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLH 465
+ + +I + +E+ LF + R V D + +++ +L
Sbjct: 957 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 1016
Query: 466 SYIIRSGFMSS 476
+ GFM S
Sbjct: 1017 RRMKEDGFMPS 1027
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 49/263 (18%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGK 88
+VK DP+ I V+ G L EAR L+ +M R N + N +I+G+ G
Sbjct: 774 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 833
Query: 89 LSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFV---------------- 128
L AK +FD MV + + VTY LI G+ KS + + KLF
Sbjct: 834 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 893
Query: 129 -------------------RMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKL 168
RM G PD VT+ LL CN+ K+ K L V + K
Sbjct: 894 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED-LQKS 952
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEA 224
D +I N +I C+ + A L++ + ++ D++ Y +I+G +G +EA
Sbjct: 953 EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREA 1012
Query: 225 IKLFMEMRDLGFETSDFTFQAVL 247
KL M++ GF S+ + L
Sbjct: 1013 DKLCRRMKEDGFMPSERIYDETL 1035
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 151/348 (43%), Gaps = 47/348 (13%)
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFS 431
++ +L++ + + R +EA + + VP + +I+ +N +L++F
Sbjct: 678 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 737
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
M + + AD T+ +++ +N + +L +++ ++ +AL+D + K G
Sbjct: 738 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 797
Query: 492 SLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
+L +A ++KEM R NV ++N+LI+ + +G +F+ MV G PD V++
Sbjct: 798 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 857
Query: 548 CVFTACSHWGLVEEGLRYFNSMT----------------------------KVYK----- 574
+ T VE+G++ F MT KV+
Sbjct: 858 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 917
Query: 575 -LVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNS-CRIHKNQDL 629
+ P Y ++D LC +GK +KA ++ ++ D D I ++ I+ CR K ++
Sbjct: 918 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE- 976
Query: 630 AKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
A L V DA Y+TM + L G K+ + M+E G
Sbjct: 977 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 1024
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 16/277 (5%)
Query: 391 RPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFA 446
R E+A +F ++ +P +T +++A +E + +M ++ D +F
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 447 SVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA----IQIFKE 502
++ + +S + +++ G+ SI +L+ + + DA I + K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 503 MPERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEG 562
E NVV +N LI NG+ L+L EM G D V++ + T + G +
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 563 LRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILN 619
R M K + P + +++DV + G D+A++L EM DP+ + ++SI+N
Sbjct: 231 ARMLRDMMK-RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 620 SCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNIL 656
+H AK+ F++ + P V N L
Sbjct: 290 GLCMHGRLYDAKKT----FDLMASKGCFPNVVTYNTL 322
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 49/210 (23%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISS----NVMISGYLKEGK 88
+V G P N I ++ ++ + +LF +M Y+ + N +I GY + GK
Sbjct: 844 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 903
Query: 89 LSIAKEIFDSMVE---------------------------------------RNAVTYTL 109
L++A+++F+ MV+ + +TY +
Sbjct: 904 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 963
Query: 110 LIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKL 168
+I G ++D+ EA+ LF + R G KPD + ++T++SG C KGL + + +
Sbjct: 964 IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR-----KGLQREADKLCRR 1018
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLASQLYK 198
+ + + D + H L+++L K
Sbjct: 1019 MKEDGFMPSERIYDETLRDHYTSLSAELIK 1048
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 169/416 (40%), Gaps = 57/416 (13%)
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFAT---MLSLAANM 354
F + EL G+S+++ Y++T LI F + R +F + M+ L
Sbjct: 93 FSQKMELYGISHDL----YSFTILIH---------CFCRCSRLSFALSVLGKMMKLGYEP 139
Query: 355 LDLQMGRQLHSQAIV---------------TTADSEVLVANALVDMYAKCRRPEEAERIF 399
+ G LH +V + + V+V N L+D K A +
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 400 VKLSSRC----TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANL 455
++ + V + +++ +G + ++ ++ +M + ++ D TF +++
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 456 ASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSW 511
++ ++L+ +I+S + +++++ G L DA + F M + NVV++
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 512 NALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK 571
N LIS + + +KLF+ M G+ D ++ + G + L F M
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 572 VYKLVPKREHYASIVDVLCRSG-------KFD---KAEKLIAEMPFDPDEIMWSSILNSC 621
++ P + ++ LC +G KFD ++EK I + ++ IM + +
Sbjct: 380 -RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN---IMIHGLCKAD 435
Query: 622 RIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
++ K +L R + V DA Y M L + G ++ + M+E G+
Sbjct: 436 KVEKAWELFCRLPVE----GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/480 (21%), Positives = 211/480 (43%), Gaps = 28/480 (5%)
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
L K++ + + N T ++I + + + A+ + ++ + G +PD TF TL+ G
Sbjct: 98 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 157
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----D 204
+ + +V+ G V+ NS+++ C+ LA L ++M +R D
Sbjct: 158 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
TY+ +I +G AI LF EM G ++S T+ +++ G +
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM------PELDGVSYNMMITAYAW 318
V ++ NV N LLD + K L EA +L+ +M P + ++YN ++ Y
Sbjct: 278 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI--ITYNTLMDGYCM 335
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLS---LAANMLD-LQMGRQLHSQAIVTTADS 374
+ E+ N+ + K F +++ + + D +++ R + + +V A
Sbjct: 336 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANA-- 393
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLF 430
+ + LV + + + + AE +F ++ S +P + ++ NG E++L++F
Sbjct: 394 --VTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451
Query: 431 SEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKC 490
++++ + + ++++ + L + G ++ + ++ K
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511
Query: 491 GSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF 546
GSL +A + ++M E N ++N LI A+ +GD A+ KL EEM G+ D+ S
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 571
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 141/657 (21%), Positives = 261/657 (39%), Gaps = 82/657 (12%)
Query: 26 KTC----IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSN 77
KTC + +++K G++P T+ N I L G++SEA L D+M + ++ N
Sbjct: 128 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 187
Query: 78 VMISGYLKEGKLSIAKEIFDSMVERN----AVTYTLLIGGYSKSDQFIEAFKLFVRMCRS 133
+++G + G S+A ++ M ERN TY+ +I + A LF M
Sbjct: 188 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 247
Query: 134 GTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
G K VT+ +L+ G C K G + V + VI N L+D + K +
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQE 306
Query: 193 ASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
A++LYKEM R + +TYN L+ GY + EA + M TF +++
Sbjct: 307 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 366
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE----L 304
+ + G ++ K L+ N + L+ + + + A +LF +M
Sbjct: 367 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 426
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLH 364
D ++Y +++ G +++++ +F LQ +K D + T++ ++ L
Sbjct: 427 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 486
Query: 365 SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQN 420
V+ ++ K EA + K+ P + +I A++++
Sbjct: 487 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 546
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG 480
G S KL EM+ +AD AS +K ++ ++ + Y + G S
Sbjct: 547 GDLTASAKLIEEMKSCGFSAD----ASSIKMVIDMLLSAMKRLTLRYCLSKGSKSR---- 598
Query: 481 SALVDMYAKCGSLKDAIQ--IFKEMPERNVVSWNALISAYASNGDGEATL-----KLFEE 533
D+ GS K + F +M N ++ + ++ + G A L KL
Sbjct: 599 ---QDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRS 655
Query: 534 MVLLGYQPDSVSFLCVFTACSHWGLVE-------------EGLRYFNSMTKVYK------ 574
VL ++ V L V WGL + + + Y + ++ +
Sbjct: 656 SVLKKFKNRDVRVL-VTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMT 714
Query: 575 ---------------LVPKREHYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIM 613
+ P Y+S++D C+ + D+A +++ M DPD+I+
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGCDPDDIL 771
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 147/338 (43%), Gaps = 17/338 (5%)
Query: 298 FYKMPELDGVSYNM-----MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAA 352
F K EL+G+++N+ MI + + ++ K+ Y+ F T++
Sbjct: 100 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF 159
Query: 353 NMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCT----V 408
+ L + + +V+ N++V+ + A + K+ R
Sbjct: 160 LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 219
Query: 409 PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI 468
++ +I + ++G + ++ LF EM + + T+ S+++ + G L +
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 279
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDG 524
+ + ++ + L+D++ K G L++A +++KEM R N++++N L+ Y
Sbjct: 280 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 339
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
+ + MV PD V+F + V++G++ F +++K LV Y+
Sbjct: 340 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSI 398
Query: 585 IVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILN 619
+V C+SGK AE+L EM PD + + +L+
Sbjct: 399 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 436
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 224/509 (44%), Gaps = 58/509 (11%)
Query: 73 TISSNVMISGYLKEGKLSIAKEIFDSMV----ERNAVTYTLLIGGYSKSDQFIEAFKLFV 128
T+SS +++GY ++S A + D M + N VT+ LI G ++ EA L
Sbjct: 152 TLSS--LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 129 RMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMH 188
RM G +PD T+ T+++G I + + K ++ V+I ++ID+ C
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 189 CVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQ 244
V+ A L+ EM + + VTYN+LI N G +A +L +M + + TF
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 245 AVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL 304
A++ A + + ++++ +K ++ ++F ++L++ + HD L EA+ +F M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 305 DG----VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG 360
D V+YN +I + ++E + LF
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELF------------------------------- 418
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISA 416
R++ + +V + N L+ + + A++IF K+ S P ++ ++
Sbjct: 419 REMSQRGLV----GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSS 476
+ G E++L +F +++ + D T+ +++ + G L + G +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 477 IYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFE 532
+ + ++ + + G ++A +F+EM E N ++N LI A +GD A+ +L +
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 533 EMVLLGYQPDSVSFLCVFTACSHWGLVEE 561
EM G+ D+ + V H G +E+
Sbjct: 595 EMRSCGFVGDASTISMVINML-HDGRLEK 622
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 205/488 (42%), Gaps = 47/488 (9%)
Query: 75 SSNVMISGYLKEGKLSIAKEIFDSMV----ERNAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
S N++I+ + + +L +A + M+ E + VT + L+ GY + EA L +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
+P+ VTF TL+ G + +V G + ++++ CK +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 191 DLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
DLA L K+M + D V Y +I N +A+ LF EM + G + T+ ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
+ + ++ ++ + NV +AL+D + K LVEA KL+ +M
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM----- 351
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
+ ++ + ++ LI F +DR L A +M +L + +
Sbjct: 352 IKRSIDPDIFTYSSLIN---------GFCMHDR--------LDEAKHMFELMISKDCFPN 394
Query: 367 AIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANVQNGH 422
V+ N L+ + K +R EE +F ++S R TV + +I Q G
Sbjct: 395 ---------VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 423 FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSA 482
+ + K+F +M D V D T++ +L + + Y+ +S IY +
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 483 LVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLG 538
+++ K G ++D +F + + NV+ + +IS + G E LF EM G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 539 YQPDSVSF 546
P+S ++
Sbjct: 566 TLPNSGTY 573
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 120/577 (20%), Positives = 240/577 (41%), Gaps = 57/577 (9%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P V F LLS + + + L + N LI
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 182 DSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA + +M + D VT ++L+ GY + EA+ L +M + ++
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
+ TF +++ G +H A + AL+D C
Sbjct: 183 PNTVTFNTLIH----------GLFLHNKASEAV---------ALIDRMVARGC------- 216
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
P+L +Y ++ G I +++L +K++ K + + T++ N ++
Sbjct: 217 ---QPDL--FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAM 413
L ++ V+ N+L+ R +A R+ + R P ++A+
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
I A V+ G E+ KL+ EM + ++ D T++S++ + K + +I
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLK 529
++ + L+ + K +++ +++F+EM +R N V++N LI GD + K
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVL 589
+F++MV G PD +++ + +G +E+ L F + K K+ P Y +++ +
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGM 510
Query: 590 CRSGKFDKAEKLIAEMPF---DPDEIMWSSILNS-CRIHKNQDLAKRAAEQLFNM----E 641
C++GK + L + P+ I+++++++ CR K A+ LF
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG-----LKEEADALFREMKEDG 565
Query: 642 VLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
L ++ Y T+ G + ++ K MR G
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 201/480 (41%), Gaps = 28/480 (5%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQM---PYR-NTISSNVMISGYLKE 86
+++K G++P + + ++SEA L DQM Y+ NT++ N +I G
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 87 GKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTF 142
K S A + D MV R + TY ++ G K A L +M + + D V +
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 143 VTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQ 202
T++ + K + + + + G V+ NSLI C AS+L +M +
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 203 R----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAF 258
R + VT++ALI + EG EA KL+ EM + FT+ +++ D +
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 259 GQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMIT 314
+ + + NV N L+ + K + E +LF +M + + V+YN +I
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 315 AYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADS 374
G + +F+K+ ++ +L L+ + + +
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 375 EVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLF 430
++ N +++ K + E+ +F LS + P +T MIS + G EE+ LF
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALF 558
Query: 431 SEMRRDNVTADQATFASVLKA----SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDM 486
EM+ D + T+ ++++A AS L K++ S GF+ S +++M
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS----CGFVGDASTISMVINM 614
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 156/354 (44%), Gaps = 24/354 (6%)
Query: 21 SYPNVKTCID--ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTI 74
+Y NV ++ + G P+ N I L G+ S+A L M R N +
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 75 SSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
+ + +I ++KEGKL A++++D M++R + TY+ LI G+ D+ EA +F M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
P+ VT+ TL+ G K ++ ++ + + G + N+LI +
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 191 DLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
D+A +++K+M D +TY+ L+ G G ++A+ +F ++ E +T+ +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG 306
+ + G + + NV + ++ + + EA LF +M E DG
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE-DG 565
Query: 307 V-----SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML 355
+YN +I A G S L ++++ + A+ +S+ NML
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGF----VGDASTISMVINML 615
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/542 (20%), Positives = 242/542 (44%), Gaps = 46/542 (8%)
Query: 40 PSTSRSNYQIMDLVQTGQLSEARELFDQM----PYRNTISSNVMISGYLKEGKLSIAKEI 95
PS I+ V+ G + +A L D+M N +++ +I+G+ K L A +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 96 FDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCND 151
FD M + N+VT+++LI + K+ + +A + + +M G P T++ G
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG--- 418
Query: 152 PKMIKGLFQVHSHVVKLGHDS------AVIICNSLIDSYCKMHCVDLASQLYKEMPQR-- 203
+KG Q H +KL +S V +CN+++ CK D A++L +M R
Sbjct: 419 --WLKG--QKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 204 --DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
+ V+YN ++ G+ + A +F + + G + +++T+ ++ D +
Sbjct: 475 GPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE 534
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE-----LDGVSYNMMITAY 316
+ + + + N V +++ K +AR+L M E + +SYN +I +
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF 594
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLS--LAANMLD--LQMGRQLHSQAIVTTA 372
G + ++ + ++ + ++++ N +D L+M ++ ++ +
Sbjct: 595 FKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL-- 652
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLK 428
++ AL+D + K E A +F +L P + ++IS G+ +L
Sbjct: 653 --DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD 710
Query: 429 LFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYA 488
L+ +M +D + D T+ +++ ++ L +L++ + G + + +V+ +
Sbjct: 711 LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770
Query: 489 KCGSLKDAIQIFKEMPERNVVS----WNALISAYASNGDGEATLKLFEEMVLLGYQPDSV 544
K G +++F+EM + NV +NA+I+ + G+ + +L +EM+ G PD
Sbjct: 771 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGA 830
Query: 545 SF 546
+F
Sbjct: 831 TF 832
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 143/665 (21%), Positives = 287/665 (43%), Gaps = 56/665 (8%)
Query: 46 NYQIMDLVQTGQLSEARELFDQMPY----RNTISSNVMISGYLKEGKLSIAKEIFDSMVE 101
N + LVQ L+EA+EL+ +M + +++ +++ L+E K + A E+ +E
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 102 RNA----VTYTLLIGGYSKSDQFIEAFKLFVRMC-RSGTKPDYVTFVTLLSGCNDPKMIK 156
R A + Y+L + K+ A L M + P T+ +++ +
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 157 GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY------KEMPQRDSVTYNA 210
++ ++ G V+ SLI +CK + DL S L KE P +SVT++
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNN--DLVSALVLFDKMEKEGPSPNSVTFSV 379
Query: 211 LIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVK-- 268
LI + G ++A++ + +M LG S F ++ + GQ+ H A+K
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK------GQK-HEEALKLF 432
Query: 269 ----TTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-----VSYNMMITAYAWT 319
T + NVFV N +L + K EA +L KM E G VSYN ++ +
Sbjct: 433 DESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQ 491
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA 379
+ + +F + N+ ++ ++ D Q ++ + + + +V
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 380 NALVDMYAKCRRPEEAERIFV------KLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
+++ K + +A + +L C + + ++I + G + ++ + EM
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSC-MSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
+ ++ + T+ S++ + ++ + G I A AL+D + K ++
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 494 KDAIQIFKEMPERNVVS----WNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCV 549
+ A +F E+ E + +N+LIS + + G+ A L L+++M+ G + D ++ +
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD- 608
G + + M V LVP Y IV+ L + G+F K K+ EM +
Sbjct: 731 IDGLLKDGNLILASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 609 --PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVG 666
P+ +++++++ N D A R +++ + +L D A + +IL +GQ ++
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF----DILV-SGQVGNLQ 844
Query: 667 KVKKA 671
V+ A
Sbjct: 845 PVRAA 849
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 130/690 (18%), Positives = 280/690 (40%), Gaps = 92/690 (13%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTY----TLLIGGYSKSDQFIEAFKLF 127
N+ + N +++ Y K+ + A +I + M+E + + + + + + EA +L+
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
RM G D VT L+ + +V S ++ G + ++ + + + CK
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281
Query: 188 HCVDLASQLYKEMPQR-----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
+ +A+ L +EM ++ TY ++I +G +AI+L EM
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEM----------- 330
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM- 301
L GI + NV +L+ + K++ LV A LF KM
Sbjct: 331 ----LSDGISM--------------------NVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 302 ---PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
P + V+++++I + G +++++ ++K++ F T++
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ-------GW 419
Query: 359 MGRQLHSQAI------VTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTA 412
+ Q H +A+ T + V V N ++ K + +EA + K+ SR P
Sbjct: 420 LKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP-NV 478
Query: 413 MISANVQNGHFEE-----SLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
+ NV GH + + +FS + + + T++ ++ ++ ++
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER-----NVVSWNALISAYASNG 522
+ S + +++ K G A ++ M E + +S+N++I + G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 523 DGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSM-TKVYKL-VPKRE 580
+ ++ + +EEM G P+ +++ + +++ L + M K KL +P
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA-- 656
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQL 637
Y +++D C+ + A L +E+ +P + +++S+++ R N A +++
Sbjct: 657 -YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 638 FNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCA 697
+ D Y T+ + L + G ++ M+ GL VP EI + V +
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL--VPD----EIIYTVIV--- 766
Query: 698 NDKNHPQMKEIILKIDILSEQMEKEGYVPD 727
N K +K+ + E+M+K P+
Sbjct: 767 ---NGLSKKGQFVKVVKMFEEMKKNNVTPN 793
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/433 (20%), Positives = 187/433 (43%), Gaps = 28/433 (6%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQ---MPYRNTISSNVMISGYLKEGKLSIAK 93
G PS + I ++ + EA +LFD+ N N ++S K+GK A
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEAT 463
Query: 94 EIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGC 149
E+ M R N V+Y ++ G+ + A +F + G KP+ T+ L+ GC
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 150 NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV--- 206
+ +V +H+ + ++ ++I+ CK+ A +L M + +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 207 --TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHG 264
+YN++I G+ EG A+ + EM G + T+ +++ + + ++
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 265 YAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVS-----YNMMITAYAWT 319
+ ++ AL+D + K + A LF ++ E +G++ YN +I+ +
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLE-EGLNPSQPIYNSLISGFRNL 702
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANML---DLQMGRQLHSQAIVTTADSEV 376
G + +++L++K+ D T +L +L +L + +L+++ +
Sbjct: 703 GNMVAALDLYKKML---KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSE 432
++ +V+ +K + + ++F ++ P + A+I+ + + G+ +E+ +L E
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 433 MRRDNVTADQATF 445
M + D ATF
Sbjct: 820 MLDKGILPDGATF 832
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 16/231 (6%)
Query: 36 TGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSI 91
G P+ + L + ++ +A E+ D+M + + + +I G+ K +
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 92 AKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
A +F ++E + Y LI G+ + A L+ +M + G + D T+ TL+
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 148 GC-NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV 206
G D +I ++++ + +G II +++ K ++++EM ++++V
Sbjct: 733 GLLKDGNLILA-SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM-KKNNV 790
Query: 207 T-----YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIG 252
T YNA+IAG+ EG EA +L EM D G TF ++ +G
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 202/490 (41%), Gaps = 55/490 (11%)
Query: 77 NVMISGYLKEGKLSIAKEIFDSMV----ERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR 132
N++I+ + + ++S+A + M+ E + VT + L+ GY + +A L +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 133 SGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
G +PD +TF TL+ G + +V+ G ++ +++ CK DL
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 193 ASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
A L +M + D V +N +I +A+ LF EM G + T+ +++
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP----EL 304
+ Q+ ++ + N+ NAL+D + K VEA KL+ M +
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLH 364
D +YN ++ F +DR L +Q+
Sbjct: 364 DIFTYNSLVNG------------------FCMHDR-----------------LDKAKQMF 388
Query: 365 SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANVQN 420
+ +V+ N L+ + K +R E+ +F ++S R TV +T +I +
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG 480
G + + K+F +M D V D T++ +L N + ++ Y+ +S IY
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVL 536
+ +++ K G + D +F + + NVV++N +IS S + L ++M
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 537 LGYQPDSVSF 546
G P+S ++
Sbjct: 569 DGPLPNSGTY 578
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 215/520 (41%), Gaps = 59/520 (11%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P V F LLS K + + + +L + N LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 182 DSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA L +M + VT ++L+ GY + +A+ L +M ++G+
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN------ALLDFYSKHDCL 291
TF TTLI +F+ N AL+D + C
Sbjct: 188 PDTITF-------------------------TTLIHGLFLHNKASEAVALVDRMVQRGC- 221
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
P L V+Y +++ G ++NL K++ K + F T++
Sbjct: 222 ---------QPNL--VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-- 409
+ L + V+ ++L+ R +A ++ + + P
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 410 --WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
+ A+I A V+ G F E+ KL+ +M + ++ D T+ S++ + KQ+ +
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGD 523
++ + + L+ + K ++D ++F+EM R + V++ LI +GD
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
+ K+F++MV G PD +++ + + G +E+ L F+ M K ++ Y
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYT 509
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPF---DPDEIMWSSILNS 620
++++ +C++GK D L + P+ + ++++++
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 198/497 (39%), Gaps = 99/497 (19%)
Query: 13 LSSLAAKNSYPNVKTCIDA-----RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQ 67
LSSL N Y + K DA ++V+ G+ P T I L + SEA L D+
Sbjct: 158 LSSLL--NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 68 MPYR----NTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQ 119
M R N ++ V+++G K G +A + + M +E + V + +I K
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 120 FIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CN-------------------DPKMI---- 155
+A LF M G +P+ VT+ +L+S C+ +P ++
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 156 -------KGLF----QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
+G F +++ ++K D + NSL++ +C +D A Q+++ M +D
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 205 S----VTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
VTYN LI G+ ++ +LF EM G T+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY----------------- 438
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV-----SYNMMITA 315
TTLI +F DC A+K+F +M DGV +Y++++
Sbjct: 439 --------TTLIQGLF---------HDGDC-DNAQKVFKQMVS-DGVPPDIMTYSILLDG 479
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
G +++++ +F +Q ++ + + TM+ + G L +
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFS 431
V+ N ++ R +EA + K+ +P + +I A++++G S +L
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIR 599
Query: 432 EMRRDNVTADQATFASV 448
EMR D +T V
Sbjct: 600 EMRSCRFVGDASTIGLV 616
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 213/497 (42%), Gaps = 58/497 (11%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVE----RNAVTYTLLIGGYSKSDQFIEAFKLF 127
N + ++ I+ + + +LS+A I M++ + VT L+ G+ ++ EA L
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 128 VRMCRSGTKPDYVTFVTLLSGC-NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
+M G +PD VTF TL+ G K + + V VVK G ++ ++I+ CK
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCK 227
Query: 187 MHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
DLA L +M + D V YN +I G +A LF +M G + FT
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ ++ + ++ ++ + ++ NAL+D + K LVEA KL+ +M
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 303 E-----LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
+ D V+YN +I + ++E + +FR++
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS------------------------ 383
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAM 413
R L + T L+ + + R + A+ +F ++ S P + +
Sbjct: 384 --QRGLVGNTVTYT---------TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
+ NG+ E +L +F M++ ++ D T+ ++++A + G L + G
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEM----PERNVVSWNALISAYASNGDGEATLK 529
++ + ++ + + G ++A +F EM P N ++N LI A +GD A+ +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 530 LFEEMVLLGYQPDSVSF 546
L +EM G+ D+ +F
Sbjct: 553 LIKEMRSCGFAGDASTF 569
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 110/554 (19%), Positives = 228/554 (41%), Gaps = 48/554 (8%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P V F LLS + + + LG + + I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 182 DSYCKMHCVDLASQLYKEMPQ----RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA + +M + VT N+L+ G+ + EA+ L +M ++G++
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKL 297
TF TTL+ +F N S+ LVE ++
Sbjct: 178 PDTVTF-------------------------TTLVHGLFQHNK----ASEAVALVE--RM 206
Query: 298 FYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
K + D V+Y +I G ++NL K++ K + + T++ +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAM 413
L ++ +V N L+ R +A R+ + + P + A+
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 414 ISANVQNGHFEESLKLFSEM-RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
I A V+ G E+ KL+ EM + + D + +++K + G ++ + + G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATL 528
+ + + L+ + + +A +FK+M +++++N L+ +NG+ E L
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 529 KLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDV 588
+FE M + D V++ + A G VE+G F S++ + + P Y +++
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSG 505
Query: 589 LCRSGKFDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRD 645
CR G ++A+ L EM D P+ +++++ + ++ + +++ + D
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 646 AAPYVTMSNILAEA 659
A+ + ++N+L +
Sbjct: 566 ASTFGLVTNMLHDG 579
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 175/420 (41%), Gaps = 48/420 (11%)
Query: 256 IAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG----VSYNM 311
I+ G+Q+ + N++ + ++++ + L A + KM +L V+ N
Sbjct: 95 ISLGEQMQNLGIS----HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTT 371
++ + I E++ L ++ Y F T++ G H++A
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH----------GLFQHNKA---- 196
Query: 372 ADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFS 431
SE A ALV ER+ VK V + A+I+ + G + +L L +
Sbjct: 197 --SE---AVALV------------ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 432 EMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCG 491
+M + + AD + +++ + L + + G ++ + L+ G
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 492 SLKDAIQIFKEMPERNV----VSWNALISAYASNGDGEATLKLFEEMVLLGYQ-PDSVSF 546
DA ++ +M E+N+ V +NALI A+ G KL++EMV + PD V++
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 547 LCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP 606
+ + VEEG+ F M++ LV Y +++ ++ D A+ + +M
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 607 FD---PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWE 663
D PD + ++ +L+ + N + A E + ++ D Y TM L +AG+ E
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 60/267 (22%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNT----ISSNVMISGYLKEGKLSIA 92
G P N I L G+ S+A L M +N + N +I ++KEGKL A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 93 KEIFDSMVER-----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
++++D MV+ + V Y LI G+ K + E ++F M + G + VT+ TL+
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 148 G------CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP 201
G C++ +M V +V G ++ N L+D C V+ A +++ M
Sbjct: 400 GFFQARDCDNAQM------VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 202 QRD---------------------------------------SVTYNALIAGYANEGFNK 222
+RD VTY +++G+ +G +
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYA 249
EA LF+EM++ G + T+ ++ A
Sbjct: 514 EADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 162/398 (40%), Gaps = 26/398 (6%)
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
+VE KL + +++ ++++I+ + S NL+ F Y R + L++
Sbjct: 75 IVEFSKLLSAIAKMN--KFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC---- 406
M+ L G +IVT N+L++ + R EA + ++
Sbjct: 133 LGKMMKLGYG-----PSIVTL--------NSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
TV +T ++ Q+ E++ L M D T+ +V+ L L +
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNG 522
+ + + + + ++D K + DA +F +M + +V ++N LIS + G
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Query: 523 DGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHY 582
+L +M+ PD V F + A G + E + ++ M K P Y
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Query: 583 ASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFN 639
+++ C+ + ++ ++ EM + + ++++++ ++ D A+ +Q+ +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 640 MEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
V D Y + + L G E+ V + M++R +
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/543 (20%), Positives = 217/543 (39%), Gaps = 57/543 (10%)
Query: 37 GFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTI----SSNVMISGYLKEGKLSIA 92
G PS+ N + V+ G + A +FD+M R + S +M+ G ++GK+ A
Sbjct: 778 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 837
Query: 93 KEIFDSMVERNAV----TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
M++R + T TL++ ++ A F +M G KP+ + F +L+ G
Sbjct: 838 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 897
Query: 149 CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSV-- 206
IK F++ +V+ G V +LID CK + A +L+ ++ + D+
Sbjct: 898 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 957
Query: 207 ---TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIH 263
TY ++I GY E A LF M++ G + T+ ++ ++
Sbjct: 958 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 1017
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM----PELDGVSYNMMITAYAWT 319
+ N++ NA +D K EA +L K E DGV+Y ++I
Sbjct: 1018 NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 1077
Query: 320 GLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVA 379
I +++ F ++ T ++ +++ +
Sbjct: 1078 NDINQALAFFCRMNKTGFE-----------------------------------ADMRLN 1102
Query: 380 NALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRR 435
N L+ + + ++ +E+ER+F + S +P +T+MIS + G + +LK F M+R
Sbjct: 1103 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 1162
Query: 436 DNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKD 495
D T+ S++ + + +L+ +I G L Y K +
Sbjct: 1163 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSAN 1222
Query: 496 AIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACS 554
A+ + + + ++ + + L+ S F++++ D V+ TACS
Sbjct: 1223 AMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACS 1282
Query: 555 HWG 557
G
Sbjct: 1283 ESG 1285
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/452 (19%), Positives = 176/452 (38%), Gaps = 17/452 (3%)
Query: 184 YCKMHCVDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTF 243
+ +++ V S L Q+ ++ ++ G EA+ + M+M++ G S T
Sbjct: 727 FMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITM 786
Query: 244 QAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE 303
VL + L I + + + ++ + ++ + + EA + M +
Sbjct: 787 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 846
Query: 304 L----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQM 359
D + +++TA GL+ +I FRK+ + F +++ ++
Sbjct: 847 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 906
Query: 360 GRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV-----PWTAMI 414
++ + + V AL+D K E+A R+F+KL T +T+MI
Sbjct: 907 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 966
Query: 415 SANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFM 474
+ + LFS M+ + + T+ +++ S +L + + GFM
Sbjct: 967 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 1026
Query: 475 SSIYAGSALVDMYAKCGSLKDAIQIFKEM----PERNVVSWNALISAYASNGDGEATLKL 530
+IY +A +D K +A ++ + E + V++ LI D L
Sbjct: 1027 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 1086
Query: 531 FEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLC 590
F M G++ D + A ++E R F + + L+P +E Y S++ C
Sbjct: 1087 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL-GLIPTKETYTSMISCYC 1145
Query: 591 RSGKFDKAEKLIAEMPFD---PDEIMWSSILN 619
+ G D A K M PD + S+++
Sbjct: 1146 KEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 1177
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 131/320 (40%), Gaps = 21/320 (6%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNV-----MISGYLKE 86
+++ GF P+ I L + G + +A E+ ++M RN NV +I G K
Sbjct: 878 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM-VRNGWKPNVYTHTALIDGLCKR 936
Query: 87 GKLSIAKEIFDSMVER-----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVT 141
G A +F +V N TYT +IGGY K D+ A LF RM G P+ T
Sbjct: 937 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 996
Query: 142 FVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM----HCVDLASQLY 197
+ TL++G +++ + + G + N+ IDS CK +L ++ +
Sbjct: 997 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 1056
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLD-DI 256
+ D VTY LI + +A+ F M GFE +D +L A +
Sbjct: 1057 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE-ADMRLNNILIAAFCRQKKM 1115
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE----LDGVSYNMM 312
+++ V LI +++ Y K + A K F+ M D +Y +
Sbjct: 1116 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 1175
Query: 313 ITAYAWTGLIKESINLFRKL 332
I+ ++ E+ L+ +
Sbjct: 1176 ISGLCKKSMVDEACKLYEAM 1195
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 104/242 (42%), Gaps = 18/242 (7%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKE 86
+R+ + G P+ + I + G A EL + M N + N I K+
Sbjct: 983 SRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK 1042
Query: 87 GKLSIAKEI----FDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDY-VT 141
+ A E+ F +E + VTYT+LI K + +A F RM ++G + D +
Sbjct: 1043 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 1102
Query: 142 FVTLLSGCNDPKMIKG--LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKE 199
+ + + C KM + LFQ+ VV LG S+I YCK +DLA + +
Sbjct: 1103 NILIAAFCRQKKMKESERLFQL---VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 1159
Query: 200 MPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD 255
M + DS TY +LI+G + EA KL+ M D G + T + Y +D
Sbjct: 1160 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 1219
Query: 256 IA 257
A
Sbjct: 1220 SA 1221
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/413 (18%), Positives = 154/413 (37%), Gaps = 41/413 (9%)
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIH 263
D+ T ++ G AI F +M DLGF+ + F +++ I ++
Sbjct: 852 DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 911
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIK 323
V+ NV+ AL+D K +A +LF K+ D N+ G K
Sbjct: 912 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCK 971
Query: 324 ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
E K +R F+ M Q + ++ L+
Sbjct: 972 ED----------KLNRAEMLFSRM----------------KEQGLFPNVNT----YTTLI 1001
Query: 384 DMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVT 439
+ + K A + + +P + A I + + E+ +L ++ +
Sbjct: 1002 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 1061
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
AD T+ +++ I+ + ++GF + + + L+ + + +K++ ++
Sbjct: 1062 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 1121
Query: 500 FKEMPERNVV----SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
F+ + ++ ++ ++IS Y GD + LK F M G PDS ++ + +
Sbjct: 1122 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCK 1181
Query: 556 WGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD 608
+V+E + + +M L P ++ C+ + D A +I P D
Sbjct: 1182 KSMVDEACKLYEAMID-RGLSPPEVTRVTLAYEYCK--RNDSANAMILLEPLD 1231
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 134/655 (20%), Positives = 270/655 (41%), Gaps = 63/655 (9%)
Query: 46 NYQIMDLVQTGQLSEARELFDQMP----YRNTISSNVMISGYLKEGKLSIAKEIFDSMVE 101
N I L + G EA + +M +T+S N +I G+ K G AK + D + E
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Query: 102 RNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKG--- 157
N +T+T+L+ Y EA++ M SG PD VTF ++++ C K+++G
Sbjct: 225 LNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDSVTYNALIAGYAN 217
L ++ V H + + +SL + H + L SQ+ D V Y L+ G
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFV 277
G +EA K TF+ +L + + NV
Sbjct: 342 AGDLREAEK---------------TFKMLL--------------------EDNQVPNVVT 366
Query: 278 GNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQ 333
AL+D K L A + +M E + V+Y+ MI Y G+++E+++L RK++
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 334 FTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPE 393
F + T++ +M +L + + + + +ALV+ + R +
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 394 EAERIFVKLSSRCT----VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
E + + + S+ + +T++I + G E +L EM+ + D ++ ++
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMP----E 505
+ + + G I + +++ K G + ++++ +M +
Sbjct: 547 SGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605
Query: 506 RNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRY 565
+++S N ++ NG E + + +M+L+ P+ ++ S + +
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKT 665
Query: 566 FNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNSCR 622
++ Y + R+ Y +++ LC+ G KA ++ +M F PD + ++S+++
Sbjct: 666 HETLLS-YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF 724
Query: 623 IHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGL 677
+ + A + + + A Y T+ L++AG + V K M+ RG+
Sbjct: 725 VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 124/561 (22%), Positives = 236/561 (42%), Gaps = 32/561 (5%)
Query: 138 DYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLY 197
D VT+ T++SG + + +Q S +VK+G + N+LID +CK+ A L
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 198 KEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQA----------VL 247
E+ + + +T+ L++ Y N +EA + +M GF+ TF + VL
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV 307
G+ L ++ + TTL+ ++F N +H + ++ + +P +D V
Sbjct: 277 EGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIY-----RHALALYSQMVVRGIP-VDLV 330
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQA 367
Y +++ G ++E+ F+ L + ++ DL + +Q
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390
Query: 368 IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHF 423
+ + V+ +++++ Y K EEA + K+ + VP + +I + G
Sbjct: 391 LEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKE 450
Query: 424 EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSAL 483
E +++L EMR V + +++ + I K L ++ G ++L
Sbjct: 451 EMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSL 510
Query: 484 VDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
+D++ K G + A+ +EM ER +VVS+N LIS G A ++ M G
Sbjct: 511 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGI 569
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
+PD +F + + G E L+ ++ M K + P +V +LC +GK ++A
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 600 KLIAE---MPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNIL 656
++ + M P+ + L++ HK D + E L + + Y T+ L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 657 AEAGQWESVGKVKKAMRERGL 677
+ G + V M RG
Sbjct: 689 CKLGMTKKAAMVMGDMEARGF 709
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 132/627 (21%), Positives = 260/627 (41%), Gaps = 74/627 (11%)
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQ-----VHSHVVKL 168
Y ++ A + MC G PD + +L+ N + GL ++S ++
Sbjct: 68 YLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFN----VNGLVHDQVSLIYSKMIAC 123
Query: 169 GHDSAVIICNSLIDSYCKMHCVDLA-SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKL 227
G V N LI S+CK+ + A S L + D+VTYN +I+G G EA +
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 228 FMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSK 287
EM +G I D +++ N L+D + K
Sbjct: 184 LSEMVKMG---------------ILPDTVSY--------------------NTLIDGFCK 208
Query: 288 HDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATM 347
V A+ L ++ EL+ +++ +++++Y I+E+ +R + + +D F+++
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSI 265
Query: 348 LS-LAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC 406
++ L L+ G L ++ + V LVD K A ++ ++ R
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHV-TYTTLVDSLFKANIYRHALALYSQMVVRG 324
Query: 407 T----VPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGK 462
V +T ++ + G E+ K F + DN + T+ +++ +S +
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384
Query: 463 QLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAY 518
+ + ++ + ++ S++++ Y K G L++A+ + ++M ++NVV ++ +I
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444
Query: 519 ASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPK 578
G E ++L +EM L+G + ++ + G ++E M V K V
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM--VSKGVTL 502
Query: 579 RE-HYASIVDVLCRSGKFDKAEKLIAEMPFD--PDEIMWSSILNSCRIHKNQDLAKRAAE 635
+ +Y S++DV + G + A EM P +++ ++L S + + A A +
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYK 562
Query: 636 QLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIF 695
+ + D A + M N + G E + K+ M+ G+ S + V +
Sbjct: 563 GMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP----SLMSCNIVVGML 618
Query: 696 CANDKNHPQMKEIILKIDILSEQMEKE 722
C N K M+E I IL++ M E
Sbjct: 619 CENGK----MEE---AIHILNQMMLME 638
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/559 (21%), Positives = 242/559 (43%), Gaps = 76/559 (13%)
Query: 49 IMD-LVQTGQLSEARELF------DQMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVE 101
+MD L + G L EA + F +Q+P N ++ ++ G K G LS A+ I M+E
Sbjct: 335 LMDGLFKAGDLREAEKTFKMLLEDNQVP--NVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 102 R----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKG 157
+ N VTY+ +I GY K EA L +M P+ T+ T++ G +
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 158 LFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIA 213
++ + +G + I ++L++ ++ + L K+M + D + Y +LI
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 214 GYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTT--- 270
+ G + A+ EM++ G ++ VL +G+ + FG+ +A K
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYN-VLISGM----LKFGKVGADWAYKGMREK 567
Query: 271 -LIWNVFVGNALLDFYSKHDCLVEARKLFYKM------PELDGVSYNMMITAYAWTGLIK 323
+ ++ N +++ K KL+ KM P L +S N+++ G ++
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSL--MSCNIVVGMLCENGKME 625
Query: 324 ESINLFRKLQF-----------------TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQ 366
E+I++ ++ +K+ R + F T +L + +++ RQ+++
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS--YGIKLSRQVYNT 683
Query: 367 AIVTTADSEVLVANALV--DMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFE 424
I T + A+V DM A+ P+ TV + +++ H
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPD-------------TVTFNSLMHGYFVGSHVR 730
Query: 425 ESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALV 484
++L +S M ++ + AT+ ++++ ++ I + S + G + +AL+
Sbjct: 731 KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI 790
Query: 485 DMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGDGEATLKLFEEMVLLGYQ 540
AK G++K ++ I+ EM +V ++N LIS +A+ G +L +EM G
Sbjct: 791 SGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVS 850
Query: 541 PDSVSFLCVFTA----CSH 555
P++ ++ + + C+H
Sbjct: 851 PNTSTYCTMISGLCKLCTH 869
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 131/642 (20%), Positives = 265/642 (41%), Gaps = 81/642 (12%)
Query: 20 NSYPNVKTCIDA--RIVKTGFDPSTSRSNYQIMDLVQTGQLSEA----RELFDQMPYRNT 73
+SY N+ +A +V +GFDP + I L + G++ E RE+ + Y N
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 294
Query: 74 ISSNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVR 129
++ ++ K A ++ MV R + V YT+L+ G K+ EA K F
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 130 MCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMH 188
+ P+ VT+ L+ G C + F + + +++ V+ +S+I+ Y K
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII-TQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 189 CVDLASQLYKEMPQRDSV----TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQ 244
++ A L ++M ++ V TY +I G G + AI+L EMR +G E +++
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 245 AVLYAGIGLDDIAFGQQIHGYA---VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
A++ L I +++ G V + + +L+D + K A +M
Sbjct: 474 ALVNH---LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 302 PE----LDGVSYNMMITA----------YAWTGLIKESI-------NLFRKLQFTKYDRR 340
E D VSYN++I+ +A+ G+ ++ I N+ Q + D
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 341 NF-------------PFATMLSLAANML--DLQMGRQLH--SQAIVTTADSEVLVANALV 383
P ++ ML + +M +H +Q ++ + +
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 384 DMYAKCRRPEEAERIF----------VKLSSRCTVPWTAMISANVQNGHFEESLKLFSEM 433
D +K +R A+ IF +KLS + + +I+ + G +++ + +M
Sbjct: 651 DTSSKHKR---ADAIFKTHETLLSYGIKLSRQV---YNTLIATLCKLGMTKKAAMVMGDM 704
Query: 434 RRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSL 493
D TF S++ + + +S ++ +G ++ + ++ + G +
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 764
Query: 494 KDAIQIFKEMPERNV----VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCV 549
K+ + EM R + ++NALIS A G+ + ++ ++ EM+ G P + ++ +
Sbjct: 765 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824
Query: 550 FTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCR 591
+ ++ G + + M K + P Y +++ LC+
Sbjct: 825 ISEFANVGKMLQARELLKEMGK-RGVSPNTSTYCTMISGLCK 865
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 132/672 (19%), Positives = 261/672 (38%), Gaps = 109/672 (16%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLK----- 85
+ +VK G P T N I + G A+ L D++ N I+ +++S Y
Sbjct: 185 SEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIE 244
Query: 86 --------------------------------EGKLSIAKEIFDSMVERNAVTYTLLIGG 113
EG L + +E+ + V N VTYT L+
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL-LLREMEEMSVYPNHVTYTTLVDS 303
Query: 114 YSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSA 173
K++ + A L+ +M G D V + L+ G ++ + +++
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 174 VIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFM 229
V+ +L+D CK + A + +M ++ + VTY+++I GY +G +EA+ L
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 230 EMRDLGFETSDFTFQAVL----YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY 285
+M D + FT+ V+ AG I +++ V+ N ++ +AL++
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE----NNYILDALVNHL 479
Query: 286 SKHDCLVEARKLFYKMPE----LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN 341
+ + E + L M LD ++Y +I + G + ++ ++Q R
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ-----ERG 534
Query: 342 FPF--ATMLSLAANMLDL-QMGRQLHSQAIVTTA-DSEVLVANALVDMYAKCRRPEEAER 397
P+ + L + ML ++G + + + ++ N +++ K E +
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 398 IFVKLSSRCTVPWTAMISANV------QNGHFEESLKLFSEMRRDNVTADQATFASVLKA 451
++ K+ S P +++S N+ +NG EE++ + ++M + + T+ L
Sbjct: 595 LWDKMKSCGIKP--SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 452 SANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----N 507
S+ + H ++ G S + L+ K G K A + +M R +
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 508 VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEE------ 561
V++N+L+ Y L + M+ G P+ ++ + S GL++E
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 562 -----GLR----YFNSMTK-------------VY------KLVPKREHYASIVDVLCRSG 593
G+R +N++ +Y LVPK Y ++ G
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832
Query: 594 KFDKAEKLIAEM 605
K +A +L+ EM
Sbjct: 833 KMLQARELLKEM 844
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/517 (19%), Positives = 220/517 (42%), Gaps = 56/517 (10%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
+A LF M +S P V F LLS + + + + LG + + I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 182 DSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ +C+ + LA + +M + D VT ++L+ GY + +A+ L +M ++G++
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 238 TSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN------ALLDFYSKHDCL 291
FTF TTLI +F+ N AL+D + C
Sbjct: 186 PDTFTF-------------------------TTLIHGLFLHNKASEAVALVDQMVQRGC- 219
Query: 292 VEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLA 351
P+L V+Y ++ G I ++NL K++ + F T++
Sbjct: 220 ---------QPDL--VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 352 ANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP-- 409
+++ L ++ V+ N+L++ R +A R+ + + P
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 410 --WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSY 467
+ A+I A + G E+ KL EM + ++ D T+ ++ + KQ+ +
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGD 523
++ + +I + L++ + KC ++D +++F+EM +R N V++ +I + GD
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
++ +F++MV D +++ + +G ++ L F + K ++ Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK-SEMELNIFIYN 507
Query: 584 SIVDVLCRSGKFDKAEKLIAEMPFDPDEIMWSSILNS 620
++++ +C++GK +A L + PD + ++++++
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/547 (20%), Positives = 225/547 (41%), Gaps = 93/547 (17%)
Query: 57 QLSEARELFDQM----PYRNTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYT 108
++ +A +LF M P+ + + N ++S K K + + + M + + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 109 LLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPK-------------- 153
+ I + + Q A + +M + G +PD VT +LL+G C+ +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 154 -----------MIKGLFQVHS----------HVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
+I GLF +H+ +V+ G ++ ++++ CK +DL
Sbjct: 183 GYKPDTFTFTTLIHGLF-LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 193 ASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLY 248
A L +M + + V +N +I + A+ LF EM G + T+ +++
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 249 AGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL---- 304
+ ++ ++ + NV NAL+D + K LVEA KL +M +
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 305 DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLH 364
D ++YN++I + + E+ +F+ + + P
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFM----VSKDCLP--------------------- 396
Query: 365 SQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANVQN 420
+ N L++ + KC+R E+ +F ++S R TV +T +I Q
Sbjct: 397 ----------NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 421 GHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAG 480
G + + +F +M + V D T++ +L + + + Y+ +S +I+
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPER-NVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
+ +++ K G + +A +F + + +VV++N +IS S + LF +M G
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566
Query: 540 QPDSVSF 546
P+S ++
Sbjct: 567 LPNSGTY 573
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 167/384 (43%), Gaps = 58/384 (15%)
Query: 22 YPNVKTCID--ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTIS 75
Y +V+ +D + G P+ N I L G+ S+A L M + N ++
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMC 131
N +I + KEGKL A+++ + M++R + +TY LLI G+ ++ EA ++F M
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 132 RSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
P+ T+ N+LI+ +CK V+
Sbjct: 391 SKDCLPNIQTY-----------------------------------NTLINGFCKCKRVE 415
Query: 192 LASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
+L++EM QR ++VTY +I G+ G A +F +M T T+ +L
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 248 YAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP-ELDG 306
+ + I Y K+ + N+F+ N +++ K + EA LF + + D
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDV 535
Query: 307 VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL------QMG 360
V+YN MI+ L++E+ +LFRK++ + + T++ AN+ D ++
Sbjct: 536 VTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR--ANLRDCDRAASAELI 593
Query: 361 RQLHSQAIVTTADSEVLVANALVD 384
+++ S V A + LV N L D
Sbjct: 594 KEMRSSGFVGDASTISLVTNMLHD 617
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/504 (20%), Positives = 209/504 (41%), Gaps = 79/504 (15%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLS 90
A+++K G++P D+V T+SS +++GY ++S
Sbjct: 142 AKMMKLGYEP----------DIV-------------------TLSS--LLNGYCHSKRIS 170
Query: 91 IAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
A + D MVE + T+T LI G ++ EA L +M + G +PD VT+ T++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR--- 203
+G I + + + + V+I N++IDS CK V++A L+ EM +
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 204 -DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
+ VTYN+LI N G +A +L M + + TF A++ A + +++
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV----SYNMMITAYAW 318
H ++ ++ + N L++ + H+ L EA+++F M D + +YN +I +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL- 377
+++ + LFR++ + T++ D + + Q + ++++
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 378 ----------------------------------VANALVDMYAKCRRPEEAERIFVKLS 403
+ N +++ K + EA +F LS
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 404 SRC-TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGK 462
+ V + MIS +E+ LF +M+ D + T+ ++++A+ +
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 463 QLHSYIIRSGFMSSIYAGSALVDM 486
+L + SGF+ S + +M
Sbjct: 591 ELIKEMRSSGFVGDASTISLVTNM 614
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 202/462 (43%), Gaps = 32/462 (6%)
Query: 13 LSSLAAKNSYPNVKTCIDA-----RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQ 67
LSSL N Y + K DA ++V+ G+ P T I L + SEA L DQ
Sbjct: 156 LSSLL--NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 68 MPYR----NTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQ 119
M R + ++ +++G K G + +A + + M ++ N V + +I K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 120 FIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNS 179
A LF M G +P+ VT+ +L++ + ++ S++++ + V+ N+
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 180 LIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
LID++ K + A +L++EM QR D++TYN LI G+ EA ++F M
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 236 FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLD-FYSKHDCLVEA 294
+ T+ ++ + G ++ + L+ N ++ F+ DC A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC-DSA 452
Query: 295 RKLFYKMPE----LDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
+ +F +M D ++Y++++ G + ++ +F+ LQ ++ + F + TM+
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP- 409
+ L + +V+ N ++ R +EA+ +F K+ T+P
Sbjct: 513 MCKAGKVGEAWDLFCS---LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Query: 410 ---WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASV 448
+ +I AN+++ S +L EMR D +T + V
Sbjct: 570 SGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 224/480 (46%), Gaps = 43/480 (8%)
Query: 49 IMDLVQTGQLSEARELFDQM---PYRNTISS-NVMISGYLKEGKLSIAKEIFDSMVE--- 101
I L + G+++ A+ +F+ Y NT+ + + +IS Y + G A +F+SM E
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 102 -RNAVTYTLLIGGYSKSD-QFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLF 159
N VTY +I K +F + K F M R+G +PD +TF +LL+ C+ + +
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 160 QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGY 215
+ + + V N+L+D+ CK +DLA ++ +MP + + V+Y+ +I G+
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 216 ANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL--YAGIGLDDIAFG--QQIHGYAVKTTL 271
A G EA+ LF EMR LG ++ +L Y +G + A +++ +K
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK-- 477
Query: 272 IWNVFVGNALLDFYSKHDCLVEARKLFYKM------PELDGVSYNMMITAYAWTGLIKES 325
+V NALL Y K E +K+F +M P L ++Y+ +I Y+ GL KE+
Sbjct: 478 --DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL--LTYSTLIDGYSKGGLYKEA 533
Query: 326 INLFRKLQFTKYDRRNFPFATML-SLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVD 384
+ +FR+ + ++ ++ +L N L + L + V+ N+++D
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGL-VGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 385 MYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQAT 444
+ + + + S+ ++P+++ + + ++LF ++ ++ T
Sbjct: 593 AFGRSATMDRS----ADYSNGGSLPFSSSALSALTETEGNRVIQLFGQL---TTESNNRT 645
Query: 445 FASVLKASANLASI-SLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
+ L+ I + +++H I+ ++ SA+++ ++C S +DA + +E+
Sbjct: 646 TKDCEEGMQELSCILEVFRKMHQLEIK----PNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 162/372 (43%), Gaps = 46/372 (12%)
Query: 208 YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAV 267
++ALI+ Y G ++EAI +F M++ G + T+ AV+ A
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA------------------ 312
Query: 268 KTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP----ELDGVSYNMMITAYAWTGLIK 323
G ++F + K F +M + D +++N ++ + GL +
Sbjct: 313 ---------CGKGGMEFK-------QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 324 ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
+ NLF ++ + ++ F + T+L + + ++ +Q V V+ + ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 384 DMYAKCRRPEEAERIFVKLS----SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
D +AK R +EA +F ++ + V + ++S + G EE+L + EM +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
D T+ ++L K++ + + R + ++ S L+D Y+K G K+A++I
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 500 FKEMP----ERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSH 555
F+E +VV ++ALI A NG + + L +EM G P+ V++ + A
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 556 WGLVEEGLRYFN 567
++ Y N
Sbjct: 597 SATMDRSADYSN 608
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 13/287 (4%)
Query: 345 ATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSS 404
+ M+S + + +++ A + V +AL+ Y + EEA +F +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 405 RCTVP----WTAMISANVQNG-HFEESLKLFSEMRRDNVTADQATFASVLKASANLASIS 459
P + A+I A + G F++ K F EM+R+ V D+ TF S+L +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 460 LGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALI 515
+ L + +++ + L+D K G + A +I +MP + NVVS++ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 516 SAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKL 575
+A G + L LF EM LG D VS+ + + + G EE L M V +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GI 475
Query: 576 VPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSILN 619
Y +++ + GK+D+ +K+ EM + P+ + +S++++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 481 SALVDMYAKCGSLKDAIQIFKEMPE----RNVVSWNALISAYASNGDGEATLKLFEEMVL 536
SA++ + G + A +IF+ V +++ALISAY +G E + +F M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 537 LGYQPDSVSFLCVFTACSHWGL-VEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKF 595
G +P+ V++ V AC G+ ++ ++F+ M + + P R + S++ V R G +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGGLW 355
Query: 596 DKAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTM 652
+ A L EM + D ++++L++ DLA Q+ ++ + Y T+
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 653 SNILAEAGQWESVGKVKKAMRERGL 677
+ A+AG+++ + MR G+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGI 440
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 208/498 (41%), Gaps = 61/498 (12%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVE----RNAVTYTLLIGGYSKSDQFIEAFKLF 127
N + N+MI+ + +LS A I M++ + VT L+ G+ ++ EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 128 VRMCRSGTKPDYVTFVTLLSGC-NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
+M G +PD VTF TL+ G K + + V VVK G ++ ++I+ CK
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCK 217
Query: 187 MHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
DLA L +M + D V Y+ +I +A+ LF EM + G FT
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM- 301
+ +++ + ++ ++ + NV N+L+D ++K L+EA KLF +M
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 302 -----PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLD 356
P + V+YN +I F +DR
Sbjct: 338 QRSIDPNI--VTYNSLING------------------FCMHDR----------------- 360
Query: 357 LQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTA 412
L +Q+ + + +V+ N L++ + K ++ + +F +S R TV +T
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 413 MISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSG 472
+I Q + + +F +M D V + T+ ++L + + Y+ +S
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 473 FMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATL 528
IY + + + K G ++D +F + + +V+++N +IS + G E
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 529 KLFEEMVLLGYQPDSVSF 546
LF +M G PDS ++
Sbjct: 541 TLFIKMKEDGPLPDSGTY 558
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/550 (21%), Positives = 229/550 (41%), Gaps = 77/550 (14%)
Query: 29 IDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGK 88
I +++K G+ PS N + ++SEA L DQM + GY
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM----------VEMGY----- 166
Query: 89 LSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG 148
+ + VT+T L+ G + ++ EA L RM G +PD VT+ +++G
Sbjct: 167 ------------QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 149 C---NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR-- 203
+P + L + + K ++ V+I +++IDS CK VD A L+ EM +
Sbjct: 215 LCKRGEPDLALNLL---NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 204 --DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQ 261
D TY++LI+ N G +A +L +M + + TF +++ A + ++
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG----VSYNMMITAYA 317
+ ++ ++ N+ N+L++ + HD L EA+++F M D V+YN +I +
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 318 WTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVL 377
+ + + LFR + + T++ D + + Q + ++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 378 VANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDN 437
N L+D K NG E+++ +F +++
Sbjct: 452 TYNTLLDGLCK-------------------------------NGKLEKAMVVFEYLQKSK 480
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
+ D T+ + + + G L + G + A + ++ + K G ++A
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 498 QIFKEMPERNVV----SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+F +M E + ++N LI A+ +GD A+ +L +EM + D+ ++ V T
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV-TDM 599
Query: 554 SHWGLVEEGL 563
H G +++G
Sbjct: 600 LHDGRLDKGF 609
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/560 (20%), Positives = 237/560 (42%), Gaps = 26/560 (4%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLI 181
EA LF M +S P V F LLS K + + LG + N +I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 182 DSYCKMHCVDLASQLYKEMPQ----RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFE 237
+ C+ + A + +M + VT N+L+ G+ + EA+ L +M ++G++
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 238 TSDFTFQAVLYA----GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVE 293
TF +++ + +A +++ + L+ V N L L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 294 ARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAAN 353
K+ E D V Y+ +I + + +++NLF ++ F +++++S N
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 354 MLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP---- 409
+L S + + V+ N+L+D +AK + EAE++F ++ R P
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 410 WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYII 469
+ ++I+ + +E+ ++F+ M + D T+ +++ + G +L +
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 470 RSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGE 525
R G + + + L+ + + +A +FK+M N++++N L+ NG E
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 526 ATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASI 585
+ +FE + +PD ++ + G VE+G F S++ + + P Y ++
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS-LKGVKPDVIAYNTM 526
Query: 586 VDVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEV 642
+ C+ G ++A L +M D PD +++++ R H +AE + M
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI---RAHLRDGDKAASAELIKEMRS 583
Query: 643 LR---DAAPYVTMSNILAEA 659
R DA+ Y ++++L +
Sbjct: 584 CRFAGDASTYGLVTDMLHDG 603
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 200/462 (43%), Gaps = 28/462 (6%)
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDD----IAFGQQIHGYAVKTTLIWNVFVG 278
EA+ LF EM S F +L A + I+FG+++ V N++
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS----HNLYTY 103
Query: 279 NALLDFYSKHDCLVEARKLFYKMPELDG----VSYNMMITAYAWTGLIKESINLFRKLQF 334
N +++ + L A + KM +L V+ N ++ + I E++ L ++
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 335 TKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEE 394
Y F T++ L + +V +++ A+++ K P+
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 395 AERIFVKLS----SRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLK 450
A + K+ V ++ +I + + H +++L LF+EM + D T++S++
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 451 ASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER---- 506
N S +L S ++ ++ ++L+D +AK G L +A ++F EM +R
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 507 NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYF 566
N+V++N+LI+ + + + ++F MV PD V++ + V +G+ F
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 567 NSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSILNSCRI 623
M++ LV Y +++ ++ D A+ + +M D P+ + ++++L+ +
Sbjct: 404 RDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG--L 460
Query: 624 HKNQDLAKRAA--EQLFNMEVLRDAAPYVTMSNILAEAGQWE 663
KN L K E L ++ D Y MS + +AG+ E
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 224/501 (44%), Gaps = 61/501 (12%)
Query: 86 EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
+ LS+ +++ N+V Y LI SK ++ EA +L M G PD TF +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 146 LSG-CNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
+ G C ++ + V+ +++ G I L++ CK+ VD A L+ +P+ +
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 205 SVTYNALIAGYANEGFNKEAIKLFMEM-RDLGFETSDFTFQAVLYA--GIGLDDIAFGQQ 261
V +N LI G+ G +A + +M G T+ +++Y GL +A +
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL-EV 411
Query: 262 IHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-----VSYNMMITAY 316
+H K NV+ L+D + K + EA + +M DG V +N +I+A+
Sbjct: 412 LHDMRNKGCKP-NVYSYTILVDGFCKLGKIDEAYNVLNEMSA-DGLKPNTVGFNCLISAF 469
Query: 317 AWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
I E++ +FR++ + F +++S + +++ H+ ++ SE
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK-----HALWLLRDMISEG 524
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
+VAN TV + +I+A ++ G +E+ KL +EM
Sbjct: 525 VVAN--------------------------TVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
D+ T+ S++K + + L ++R G S + + L++ + G +++A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 497 IQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSF------ 546
++ KEM R ++V++N+LI+ G E L +F ++ G PD+V+F
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 547 LC----VFTACSHWGLVEEGL 563
LC V+ AC L++EG+
Sbjct: 679 LCKGGFVYDACL---LLDEGI 696
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 183/437 (41%), Gaps = 52/437 (11%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSI 91
R++ GF P Y + L + G++ A++LF ++P + N +I G++ G+L
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 92 AKEIFDSMVERNAV-----TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL 146
AK + MV + TY LI GY K A ++ M G KP+ ++ L+
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 147 SGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR--- 203
G I + V + + G + N LI ++CK H + A ++++EMP++
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 204 -DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI 262
D T+N+LI+G K A+ L +M
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDM------------------------------- 520
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM----PELDGVSYNMMITAYAW 318
+ ++ N N L++ + + + EARKL +M LD ++YN +I
Sbjct: 521 ----ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 319 TGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLV 378
G + ++ +LF K+ + N +++ ++ + + ++ + +++
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 379 ANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAMISANVQNGHFEESLKLFSEMR 434
N+L++ + R E+ +F KL + TV + ++S + G ++ L E
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGI 696
Query: 435 RDNVTADQATFASVLKA 451
D + T++ +L++
Sbjct: 697 EDGFVPNHRTWSILLQS 713
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 100/494 (20%), Positives = 213/494 (43%), Gaps = 35/494 (7%)
Query: 207 TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYA 266
+YN ++ + +K A +F +M + FTF V+ A +++I +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 267 VKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLI 322
K + N + L+ SK + + EA +L +M + D ++N +I I
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 323 KESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANAL 382
E+ + ++ + + + +++ + + + L + E+++ N L
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR----IPKPEIVIFNTL 359
Query: 383 VDMYAKCRRPEEAERIFVKL-SSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDN 437
+ + R ++A+ + + +S VP + ++I + G +L++ +MR
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 438 VTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAI 497
+ ++ ++ L I + + + G + + L+ + K + +A+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 498 QIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTAC 553
+IF+EMP + +V ++N+LIS + + L L +M+ G ++V++ + A
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 554 SHWGLVEEGLRYFNSMTKVYKLVPKRE-HYASIVDVLCRSGKFDKAEKLIAEMPFD---P 609
G ++E + N M V++ P E Y S++ LCR+G+ DKA L +M D P
Sbjct: 540 LRRGEIKEARKLVNEM--VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 610 DEIMWSSILNS-CRIHKNQDLAKRAAEQLFNME-VLRDAAP----YVTMSNILAEAGQWE 663
I + ++N CR + + A E F E VLR + P + ++ N L AG+ E
Sbjct: 598 SNISCNILINGLCR----SGMVEEAVE--FQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 664 SVGKVKKAMRERGL 677
+ + ++ G+
Sbjct: 652 DGLTMFRKLQAEGI 665
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 136/338 (40%), Gaps = 43/338 (12%)
Query: 24 NVKTCIDARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVM 79
+ K + + G P N I + G + A E+ M + N S ++
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 80 ISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGT 135
+ G+ K GK+ A + + M ++ N V + LI + K + EA ++F M R G
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 136 KPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQ 195
KPD TF +L+SG + IK + ++ G + + N+LI+++ + + A +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 196 LYKEM----PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGI 251
L EM D +TYN+LI G G +A LF +M G S+ +
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS--------- 601
Query: 252 GLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNM 311
N+ + N L + + +++ + D V++N
Sbjct: 602 ---------------------CNILI-NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 312 MITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS 349
+I G I++ + +FRKLQ F T++S
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 142/653 (21%), Positives = 249/653 (38%), Gaps = 114/653 (17%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGY----LKE 86
R+ F PS S N I ++ +L A + +M N + + K
Sbjct: 183 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 242
Query: 87 GKLSIAKEIFDSM-VERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTL 145
GK A + ++ + V YT LI G ++ F EA RM + P+ VT+ TL
Sbjct: 243 GKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 302
Query: 146 LSGCNDPK------------MIKGLFQ--------VHSH---------------VVKLGH 170
L GC + K M++G + VH++ +VK GH
Sbjct: 303 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 362
Query: 171 DSAVIICNSLIDSYC----KMHC--VDLASQLYKEMPQRDSVTYNALIAGYA----NEGF 220
++ N LI S C ++C +DLA + Y EM V ++ + + G
Sbjct: 363 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 422
Query: 221 NKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNA 280
++A + EM GF T+ VL + + + L+ +V+
Sbjct: 423 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 482
Query: 281 LLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTK 336
++D + K + +ARK F +M E+ + V+Y +I AY L+ K
Sbjct: 483 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY---------------LKAKK 527
Query: 337 YDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAE 396
N F TMLS ++ +AL+D + K + E+A
Sbjct: 528 VSYANELFETMLSEGCL--------------------PNIVTYSALIDGHCKAGQVEKAC 567
Query: 397 RIFVKLSSRCTVP--------------------WTAMISANVQNGHFEESLKLFSEMRRD 436
+IF ++ VP + A++ ++ EE+ KL M +
Sbjct: 568 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 627
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
+Q + +++ + + +++ + + GF +++Y S+L+D Y K A
Sbjct: 628 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 687
Query: 497 IQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTA 552
++ +M E NVV + +I G + KL + M G QP+ V++ +
Sbjct: 688 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 747
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
G +E L M + P Y ++D C++G D A L+ EM
Sbjct: 748 FGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 799
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 203/484 (41%), Gaps = 84/484 (17%)
Query: 46 NYQIM--DLVQTGQLSEARELFDQMP----YRNTISSNVMISGYLKEGKLSIAKEIFDSM 99
Y IM + G + +AR+ F++M N ++ +I YLK K+S A E+F++M
Sbjct: 479 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 538
Query: 100 VER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMI 155
+ N VTY+ LI G+ K+ Q +A ++F RMC S PD + ++
Sbjct: 539 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE---- 594
Query: 156 KGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMP----QRDSVTYNAL 211
+VV G +L+D +CK H V+ A +L M + + + Y+AL
Sbjct: 595 ------RPNVVTYG---------ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 639
Query: 212 IAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL--YAGIGLDDIAFGQQIHGYAVKT 269
I G G EA ++ EM + GF + +T+ +++ Y + D+A ++ ++
Sbjct: 640 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA--SKVLSKMLEN 697
Query: 270 TLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPE----LDGVSYNMMITAYAWTGLIKES 325
+ NV + ++D K EA KL M E + V+Y MI + G I+
Sbjct: 698 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 757
Query: 326 INLFRKLQFTKYDRRNFPFATM---------LSLAANMLDLQMGRQLH-------SQAIV 369
+ L ++ + + L +A N+L+ +M +Q H + ++
Sbjct: 758 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE-EM-KQTHWPTHTAGYRKVI 815
Query: 370 TTADSEVL-------------------VANALVDMYAKCRRPEEAERIFVKLSSRCTV-- 408
+ E + V L+D K +R E A R+ ++++
Sbjct: 816 EGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLV 875
Query: 409 ----PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQL 464
+ ++I + E + +LFSEM + V + +F S++K + IS L
Sbjct: 876 DYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLL 935
Query: 465 HSYI 468
+I
Sbjct: 936 LDFI 939
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 130/701 (18%), Positives = 266/701 (37%), Gaps = 109/701 (15%)
Query: 3 LLHRKIPLKNLS-----------SLAAKNSYPNVKTCIDARIVKTGFDPSTSRSNYQIMD 51
L+HR++ L NL SL + T ++ F P T I
Sbjct: 215 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETE----NFVPDTVFYTKLISG 270
Query: 52 LVQTGQLSEARELFDQMP----YRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAV-- 105
L + EA + ++M N ++ + ++ G L + +L K + + M+
Sbjct: 271 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPS 330
Query: 106 --TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL-SGCNDPKMI------- 155
+ L+ Y S A+KL +M + G P YV + L+ S C D +
Sbjct: 331 PKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 390
Query: 156 ---------------------------------KGLFQVHSHVVKLGHDSAVIICNSLID 182
+ F V ++ G + +++
Sbjct: 391 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 450
Query: 183 SYCKMHCVDLASQLYKEMPQ----RDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFET 238
C ++LA L++EM + D TY ++ + G ++A K F EMR++G
Sbjct: 451 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 510
Query: 239 SDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLF 298
+ T+ A+++A + +++ ++ + + N+ +AL+D + K + +A ++F
Sbjct: 511 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 570
Query: 299 YKM------PELDG--------------VSYNMMITAYAWTGLIKESINLFRKLQFTKYD 338
+M P++D V+Y ++ + + ++E+ L + +
Sbjct: 571 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 630
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ ++ + L +++ ++ + + ++L+D Y K +R + A ++
Sbjct: 631 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 690
Query: 399 FVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASAN 454
K+ P +T MI + G +E+ KL M + T+ +++
Sbjct: 691 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 750
Query: 455 LASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNAL 514
+ I +L + G + L+D K G+L A + +EM + + W
Sbjct: 751 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH---WPTH 807
Query: 515 ISAYAS-----NGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGL----VEEGLRY 565
+ Y N + +L L +E+ Q D+ FL V+ + +E LR
Sbjct: 808 TAGYRKVIEGFNKEFIESLGLLDEIG----QDDTAPFLSVYRLLIDNLIKAQRLEMALRL 863
Query: 566 FNSM-TKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
+ T LV Y S+++ LC + K + A +L +EM
Sbjct: 864 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 904
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 131/623 (21%), Positives = 248/623 (39%), Gaps = 75/623 (12%)
Query: 77 NVMISGYLKEGKLSIAKE----IFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR 132
NV++ + + G SIA E + D + TY LI + K+D+ A + M
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222
Query: 133 SGTKPDYVTFVTL-LSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVD 191
+ + D T S C K + L V + + LI C+ +
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETE----NFVPDTVFYTKLISGLCEASLFE 278
Query: 192 LASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
A M + VTY+ L+ G N+ ++ M G S F +++
Sbjct: 279 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 338
Query: 248 YAGIGLDDIAFGQQIHGYAVKTT-----LIWNVFVGNALLDFYSKH-DCLVEARKLFYKM 301
+A D ++ ++ VK +++N+ +G+ D S + D L A K
Sbjct: 339 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK----- 393
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR 361
+Y+ M+ A G++ IN+ FT+ + S + R
Sbjct: 394 ------AYSEMLAA----GVVLNKINVS---SFTR---------CLCSAGKYEKAFSVIR 431
Query: 362 QLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISAN 417
++ Q + + V N L + + E A +F ++ V +T M+ +
Sbjct: 432 EMIGQGFIPDTSTYSKVLNYLCNA----SKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 487
Query: 418 VQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSI 477
+ G E++ K F+EMR T + T+ +++ A +S +L ++ G + +I
Sbjct: 488 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 547
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEM-PERNVVSWNALISAYASNGDGEATLKLFEEMVL 536
SAL+D + K G ++ A QIF+ M ++V + Y N +
Sbjct: 548 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE------------- 594
Query: 537 LGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFD 596
+P+ V++ + VEE + ++M+ + P + Y +++D LC+ GK D
Sbjct: 595 ---RPNVVTYGALLDGFCKSHRVEEARKLLDAMS-MEGCEPNQIVYDALIDGLCKVGKLD 650
Query: 597 KAEKLIAEMP---FDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMS 653
+A+++ EM F +SS+++ K QDLA + ++ + Y M
Sbjct: 651 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 710
Query: 654 NILAEAGQWESVGKVKKAMRERG 676
+ L + G+ + K+ + M E+G
Sbjct: 711 DGLCKVGKTDEAYKLMQMMEEKG 733
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 407 TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHS 466
TV +T +IS + FEE++ + MR + + T++++L N + K++ +
Sbjct: 261 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 320
Query: 467 YIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVVSWNALISAYASNGDGEA 526
++ G S +IF N+L+ AY ++GD
Sbjct: 321 MMMMEGCYPSP--------------------KIF-----------NSLVHAYCTSGDHSY 349
Query: 527 TLKLFEEMVLLGYQPDSVSF-LCVFTACS-----HWGLVEEGLRYFNSMTKVYKLVPKRE 580
KL ++MV G+ P V + + + + C + L++ + ++ M +V +
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA-GVVLNKI 408
Query: 581 HYASIVDVLCRSGKFDKAEKLIAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQL 637
+ +S LC +GK++KA +I EM F PD +S +LN +LA E++
Sbjct: 409 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468
Query: 638 FNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
++ D Y M + +AG E K MRE G T
Sbjct: 469 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 509
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 126/583 (21%), Positives = 227/583 (38%), Gaps = 69/583 (11%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISS----NVMISGYLKEGK 88
++ +G P I + + + EL +M RN + S ++ G G
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 89 L----SIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
L +I KE+ S N V YT LI + ++ +F +A ++ M G PD + +
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 145 LLSGCNDPKMI------------KGL-------------------FQVHSHVVKLGHDSA 173
L+ G + K + GL F VK +
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 174 V----IICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAI 225
V ++C LI+ YCK V A Y+ M + D+ TY L+ G +A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 226 KLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFY 285
++F EMR G F++ ++ L ++ I V+ L NV + N LL +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 286 SKHDCLVEARKLFYKMP----ELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRN 341
+ + +A++L +M + V+Y +I Y +G + E+ LF +++ +
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 342 FPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI--- 398
F + T++ + D++ + A S NAL++ K + E +
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPF-NALINWVFKFGKTELKTEVLNR 791
Query: 399 -----FVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASA 453
F + V + MI + G+ E + +LF +M+ N+ T+ S+L
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 454 NLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV---- 509
+ + + I +G S +++ + K G A+ + +M +N V
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 510 -----SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFL 547
+ AL+S +A G+ E K+ E MV L Y PDS + +
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/608 (18%), Positives = 246/608 (40%), Gaps = 65/608 (10%)
Query: 85 KEGKLSIAKEIFDSMVERN----AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYV 140
KEG + AK +FD M+ A Y LI GY + + ++L V M +
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 141 TFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEM 200
T+ T++ G + G + + ++ G V+I +LI ++ + A ++ KEM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 201 PQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDI 256
++ D YN+LI G + EA +EM + G + + FT+ A + I +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 257 AFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMM 312
A + + ++ N + L++ Y K ++EA + M + D +Y ++
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 313 ITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTA 372
+ + ++ +FR+++ F + +++ + + ++Q + + +
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 373 DSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLK 428
V++ N L+ + + E+A+ + ++S + P + +I ++G E+ +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 429 LFSEMRRDNVTADQATFASVLKASANL------------------ASISLGKQLHSYIIR 470
LF EM+ + D + +++ L +S + L +++ +
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778
Query: 471 SG-------FMSSIYAGS-------------ALVDMYAKCGSLKDAIQIFKEMPERN--- 507
G ++ + GS ++D K G+L+ A ++F +M N
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 508 -VVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYF 566
V+++ +L++ Y G +F+E + G +PD + + + A G+ + L
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 567 NSMTKVYKLVPKREHYASIVDVL----CRSGKFDKAEKLIAEM---PFDPDEIMWSSILN 619
+ M + + S L + G+ + AEK++ M + PD ++N
Sbjct: 899 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Query: 620 SCRIHKNQ 627
I NQ
Sbjct: 959 ESCISSNQ 966
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 203/459 (44%), Gaps = 50/459 (10%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISG----YLKEGK 88
+V+ G P+ I ++ + + A + +M + + V+ +G Y K+GK
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 89 LSIAKEIFDSMVER----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVT 144
+ A + SMV++ +A TYT+L+ G K+D+ +A ++F M G PD ++
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 145 LLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR- 203
L++G + ++ + +V+ G VII N L+ +C+ ++ A +L EM +
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 204 ---DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA--- 257
++VTY +I GY G EA +LF EM+ G F + ++ L+D+
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 258 --FGQQIHGYAVKTTLIWNVFVGNALLDF---YSKHDCLVEARKL-----FYKMPELDGV 307
FG G A T NAL+++ + K + E F + + + V
Sbjct: 753 TIFGTNKKGCASSTAPF------NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 308 SYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQ----- 362
+YN+MI G ++ + LF ++Q + ++L N D +MGR+
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL----NGYD-KMGRRAEMFP 861
Query: 363 LHSQAIVTTADSEVLVANALVDMYAKCRRPEEA----ERIFVK--LSSRCTVPWT---AM 413
+ +AI + + ++ + +++ + K +A +++F K + C + + A+
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKAS 452
+S + G E + K+ M R D AT ++ S
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINES 960
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 125/671 (18%), Positives = 255/671 (38%), Gaps = 95/671 (14%)
Query: 40 PSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTI----SSNVMISGYLKEGKLSIAKEI 95
P SR + L++ +L +++ M RN + + +++I + + G + + K++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 96 F---------------------DSMVERNAV----TYTLLIGGYSKSDQFIEAFKLFVRM 130
+SM+ + V TY +LI G K + +A L V M
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 131 CRSGTKPDYVTFVTLLSGC---NDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
G D T+ L+ G + KGL VH +V G + + + I K
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGL--VH-EMVSHGINIKPYMYDCCICVMSKE 360
Query: 188 HCVDLASQLYKEM------PQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
++ A L+ M PQ + Y +LI GY E ++ +L +EM+ S +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQA--YASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 242 TFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
T+ V+ D+ I + + NV + L+ + ++ +A ++ +M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 302 PEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
E D YN +I + + E+ + ++ F + +S +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTV----PWTAM 413
+ + ++ L++ Y K + EA + + + + +T +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
++ +N +++ ++F EMR + D ++ ++ + L ++ + ++ G
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLK 529
++ + L+ + + G ++ A ++ EM + N V++ +I Y +GD +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTK---------------VYK 574
LF+EM L G PDS + + C VE + F + K V+K
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778
Query: 575 L----------------------VPKREHYASIVDVLCRSGKFDKAEKLIAEMP---FDP 609
P Y ++D LC+ G + A++L +M P
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 610 DEIMWSSILNS 620
I ++S+LN
Sbjct: 839 TVITYTSLLNG 849
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 168/413 (40%), Gaps = 60/413 (14%)
Query: 204 DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIH 263
D V + L GY +G+ +EA+ +F +G E + + LD + ++
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSS--SMGLE----LVPRLSRCKVLLDALLRWNRLD 203
Query: 264 GYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIK 323
L W+V+ G +VE +F D +Y+M+I A+ G ++
Sbjct: 204 -------LFWDVYKG------------MVERNVVF------DVKTYHMLIIAHCRAGNVQ 238
Query: 324 ESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALV 383
++ K + + F AT L++ +L I + L+
Sbjct: 239 LGKDVLFKTE------KEFRTAT--------LNVDGALKLKESMICKGLVPLKYTYDVLI 284
Query: 384 DMYAKCRRPEEAERIFVKLSSRCTV----PWTAMISANVQNGHFEESLKLFSEMRRDNVT 439
D K +R E+A+ + V++ S ++ +I ++ + + + L EM +
Sbjct: 285 DGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344
Query: 440 ADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQI 499
+ + + + K L +I SG + A ++L++ Y + +++ ++
Sbjct: 345 IKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 500 FKEMPERNVV----SWNALISAYASNGDGEATLKLFEEMVLLGYQPDSV---SFLCVFTA 552
EM +RN+V ++ ++ S+GD + + +EM+ G +P+ V + + F
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 553 CSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEM 605
S +G + +R M K + P Y S++ L ++ + D+A + EM
Sbjct: 465 NSRFG---DAMRVLKEM-KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 129/637 (20%), Positives = 252/637 (39%), Gaps = 155/637 (24%)
Query: 23 PNVKTCIDARIVKTGFDPSTSRSNYQIMDLVQ---TGQLSEARELFDQMPY----RNTIS 75
P+V I ++++ P+ N ++ LV+ + +S ARE+FD M N +
Sbjct: 147 PHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQT 206
Query: 76 SNVMISGYLKEGKLSIAKEIFDSMVER-----NAVTYTLLIGGYSKSDQFIEAFKLFVRM 130
NV+++GY EGKL A + + MV + VTY ++ SK + + +L + M
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 131 CRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
++G P+ VT+ N+L+ YCK+ +
Sbjct: 267 KKNGLVPNRVTY-----------------------------------NNLVYGYCKLGSL 291
Query: 191 DLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
A Q+ + M Q D TYN LI G N G +E ++L M+ L + T+ +
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 247 LYA----GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP 302
+ G+ L+ +Q+ VK N N L + K + + ++
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKA----NQVTHNISLKWLCKEEKREAVTRKVKELV 407
Query: 303 ELDG-----VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDL 357
++ G V+Y+ +I AY G + ++ + R++
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG------------------------ 443
Query: 358 QMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRC----TVPWTAM 413
Q G ++++ + N ++D K R+ +EA + R V + +
Sbjct: 444 QKGIKMNT-----------ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 414 ISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGF 473
I + E++L+++ EM++ +T +TF S+ +G H
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL-----------IGGLCHH------- 534
Query: 474 MSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGDGEATLK 529
G + A++ F E+ E ++ ++N++I Y G E +
Sbjct: 535 -----------------GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 530 LFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKRE----HYASI 585
+ E + ++PD+ + + G+ E+ L +FN+ L+ +RE Y ++
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT------LIEEREVDTVTYNTM 631
Query: 586 VDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILN 619
+ C+ K +A L++EM +PD ++S ++
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 120/574 (20%), Positives = 234/574 (40%), Gaps = 65/574 (11%)
Query: 123 AFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKM--IKGLFQVHSHVVKLGHDSAVIICNS 179
A ++F +M R KP+ +T TLL G P I +V +VK+G V N
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 180 LIDSYCKMHCVDLASQLYKEMPQR-----DSVTYNALIAGYANEGFNKEAIKLFMEMRDL 234
L++ YC ++ A + + M D+VTYN ++ + +G + +L ++M+
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 235 GFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEA 294
G + T+ ++Y L + QI +T ++ ++ N L++ + E
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 295 RKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
+L M L D V+YN +I GL E+ L +++ +
Sbjct: 330 LELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND-------------GV 376
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLV--ANALVDMYAKCRRPEEAERIFVKLSSRCTV 408
AN Q+ + + + E + LVDM+ S V
Sbjct: 377 KAN----QVTHNISLKWLCKEEKREAVTRKVKELVDMHG---------------FSPDIV 417
Query: 409 PWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYI 468
+ +I A ++ G +L++ EM + + + T ++L A + L +
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 469 IRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPE----RNVVSWNALISAYASNGDG 524
+ GF+ L+ + + ++ A++++ EM + V ++N+LI +G
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 525 EATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYAS 584
E ++ F+E+ G PD +F + G VE+ ++N K + P
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK-HSFKPDNYTCNI 596
Query: 585 IVDVLCRSGKFDKA----EKLIAEMPFDPDEIMWSSILNS-CRIHKNQDLAKRAAEQLFN 639
+++ LC+ G +KA LI E + D + +++++++ C+ K K A + L
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKK----LKEAYDLLSE 650
Query: 640 ME---VLRDAAPYVTMSNILAEAGQWESVGKVKK 670
ME + D Y + ++L E G+ ++ K
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 41/300 (13%)
Query: 60 EARELFDQMPYR-NTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGY 114
+ +EL D + + ++ + +I YLK G LS A E+ M ++ N +T ++
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 115 SKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAV 174
K + EA L + G D VT+ TL+ G + ++ ++ + K+ V
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 175 IICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFME 230
NSLI C +LA + + E+ + D T+N++I GY EG ++A + + E
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 231 MRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDC 290
F+ ++T +L G G K L+F+ +
Sbjct: 582 SIKHSFKPDNYTCNILLN----------GLCKEGMTEKA------------LNFF---NT 616
Query: 291 LVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
L+E R E+D V+YN MI+A+ +KE+ +L +++ + F + + +SL
Sbjct: 617 LIEER-------EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/541 (20%), Positives = 229/541 (42%), Gaps = 65/541 (12%)
Query: 62 RELFDQMPYRNTISSNVMISGYLK----EGKLSIAKEIFDSMVERNAVTYTLLIGGYSKS 117
R++ P I N + S K E L++ K++ + + T +++I + +
Sbjct: 77 RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 118 DQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVVKLGHDSAVII 176
+ AF ++ + G +PD V F TLL+G C + ++ + L ++ +V++GH +I
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL-ELVDRMVEMGHKPTLIT 195
Query: 177 CNSLIDSY-----------------------------------CKMHCVDLASQLYKEMP 201
N+L++ CK LA +L ++M
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 202 QR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIA 257
+R D+V Y+ +I G +G A LF EM GF+ T+ ++
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 258 FGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPEL----DGVSYNMMI 313
G ++ +K + NV + L+D + K L EA +L +M + + ++YN +I
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 314 TAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLS--LAANMLD--LQMGRQLHSQAIV 369
+ ++E+I + + D F +++ AN +D L++ R++ + ++
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 370 TTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEE 425
+ + N LV + + + E A+++F ++ SR P + ++ NG E+
Sbjct: 436 ----ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 426 SLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVD 485
+L++F ++ + + D + ++ N + + L + G A + ++
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 486 MYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
+ SL A +F++M E + +++N LI A+ + D +L EEM G+
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 542 D 542
D
Sbjct: 612 D 612
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/592 (19%), Positives = 244/592 (41%), Gaps = 56/592 (9%)
Query: 67 QMPYRNTISSNVMISGYLKEGKLSIAKEIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKL 126
+ YR+ +SS ++ G + + + +++ S + + L +K+ Q+ L
Sbjct: 53 NLSYRDKLSSGLV--GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLAL 110
Query: 127 FVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCK 186
+M G T +++ + + F ++KLG++ +I N+L++ C
Sbjct: 111 CKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC- 169
Query: 187 MHC-----VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDF 241
+ C ++L ++ + + +T N L+ G G +A+ L M + GF+ ++
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 242 TFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM 301
T+ VL + + +T L + RK+ +
Sbjct: 230 TYGPVL-------------NVMCKSGQTALAMELL------------------RKMEERN 258
Query: 302 PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGR 361
+LD V Y+++I G + + NLF +++ + + T++ N G
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 362 QLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISAN 417
+L I V+ + L+D + K + EA+++ ++ R P + ++I
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 418 VQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSI 477
+ EE++++ M D TF ++ I G +L + G +++
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 478 YAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEE 533
+ LV + + G L+ A ++F+EM R ++VS+ L+ NG+ E L++F +
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 534 MVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMT-KVYKLVPKREHYASIVDVLCRS 592
+ + D ++ + + V++ F S+ K KL + Y ++ LCR
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR--AYNIMISELCRK 556
Query: 593 GKFDKAEKLIAEMPFD---PDEIMWSSILNSCRIHKNQDLAKRAAEQLFNME 641
KA+ L +M + PDE+ ++ ++ R H D A AAE + M+
Sbjct: 557 DSLSKADILFRKMTEEGHAPDELTYNILI---RAHLGDDDATTAAELIEEMK 605
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 202/475 (42%), Gaps = 57/475 (12%)
Query: 31 ARIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFD---QMPYRNT-ISSNVMISGYLKE 86
+I+K G++P T N + L ++SEA EL D +M ++ T I+ N +++G
Sbjct: 147 GKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN 206
Query: 87 GKLSIAKEIFDSMV-----------------------------------ERN----AVTY 107
GK+S A + D MV ERN AV Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 108 TLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIKGLFQVHSHVV 166
+++I G K AF LF M G K D +T+ TL+ G CN + G ++ ++
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA-KLLRDMI 325
Query: 167 KLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGFNK 222
K V+ + LIDS+ K + A QL KEM QR +++TYN+LI G+ E +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 223 EAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALL 282
EAI++ M G + TF ++ + I G ++ +I N N L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 283 DFYSKHDCLVEARKLFYKMPEL----DGVSYNMMITAYAWTGLIKESINLFRKLQFTKYD 338
+ + L A+KLF +M D VSY +++ G +++++ +F K++ +K +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 339 RRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERI 398
+ ++ N + L + + N ++ + +A+ +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 399 FVKLSSRCTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
F K++ P + +I A++ + + +L EM+ AD +T V+
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/555 (20%), Positives = 231/555 (41%), Gaps = 67/555 (12%)
Query: 190 VDLASQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA 249
VDL + + P + +N L + A + + L +M G S +T ++
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 250 GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG--- 306
+++ G +K + + N LL+ + EA +L +M E+
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 307 -VSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHS 365
++ N ++ G + +++ L ++ T + + +L+
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN---------------- 236
Query: 366 QAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEE 425
V + +A L+ R+ EE +KL + V ++ +I ++G +
Sbjct: 237 ---VMCKSGQTALAMELL------RKMEERN---IKLDA---VKYSIIIDGLCKDGSLDN 281
Query: 426 SLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVD 485
+ LF+EM AD T+ +++ N G +L +I+ ++ S L+D
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 486 MYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGYQP 541
+ K G L++A Q+ KEM +R N +++N+LI + E +++ + M+ G P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 542 DSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKL 601
D ++F + +++GL F M+ + ++ Y ++V C+SGK + A+KL
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 602 IAEM---PFDPDEIMWSSILNSCRIHKNQDLAKRAAEQLFN------MEVLRDAAPYVTM 652
EM PD + + +L+ + N +L K A ++F ME+ D Y+ +
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDG--LCDNGELEK--ALEIFGKIEKSKMEL--DIGIYMII 514
Query: 653 SNILAEAGQWESVGKVKKAMRERGLTKVPAYSWVEIKHKVHIFCANDKNHPQMKEIILKI 712
+ + A + + + ++ +G+ K+ A ++ + C D + K
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGV-KLDARAY---NIMISELCRKDS--------LSKA 562
Query: 713 DILSEQMEKEGYVPD 727
DIL +M +EG+ PD
Sbjct: 563 DILFRKMTEEGHAPD 577
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 359 MGRQLHSQA-------IVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWT 411
M R+L SQA ++ T + + N ++ C ER F S R + +
Sbjct: 5 MIRRLSSQASRFVQPRLLETGTLRIALINCPNELLFCC------ERGFSTFSDR-NLSYR 57
Query: 412 AMISANVQNGHFEESLKLFSEMRRD----NVTADQATFASVLKASANLASISLGKQLHSY 467
+S+ + ++++ LF +M + V F+++ K ++L KQ+ S
Sbjct: 58 DKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES- 116
Query: 468 IIRSGFMSSIYAGSALVDMYAKCGSLKDAI----QIFKEMPERNVVSWNALISAYASNGD 523
G SIY S +++ + +C L A +I K E + V +N L++
Sbjct: 117 ---KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 524 GEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYA 583
L+L + MV +G++P ++ + G V + + + M + P Y
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNEVTYG 232
Query: 584 SIVDVLCRSGKFDKAEKLIAEMP---FDPDEIMWSSILNS-CRIHKNQDLAKRAAEQLFN 639
+++V+C+SG+ A +L+ +M D + +S I++ C+ D + A LFN
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK-----DGSLDNAFNLFN 287
Query: 640 -MEV---LRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLT 678
ME+ D Y T+ AG+W+ K+ + M +R ++
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 216/504 (42%), Gaps = 37/504 (7%)
Query: 72 NTISSNVMISGYLKEGKLSIAKEIFDSMVERNAV----TYTLLIGGYSKSDQFIEAFKLF 127
+ +S N ++SGY K G + +AK F ++++ V ++ +LI G EA +L
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 128 VRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM 187
M + G +PD VT+ L G + MI G ++V ++ G VI L+ C++
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 188 HCVDLASQLYKEMPQR-----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFT 242
+D+ L K+M R + + +++G G EA+ LF +M+ G
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 400
Query: 243 FQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM- 301
+ V++ L ++ ++ N ALL + L+EAR L +
Sbjct: 401 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 302 ---PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQ 358
LD V YN++I YA +G I+E++ LF+ + T F +++ ++
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 359 MGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANV 418
R++ + V+ L+D YA C + + + ++ + +P T + + +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE-GIPPTNVTYSVI 579
Query: 419 QNGH-----------------FEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
G FE+ + +M + + DQ T+ ++++ + +S G
Sbjct: 580 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS-G 638
Query: 462 KQLHSYIIRSGFMSSIYAG-SALVDMYAKCGSLKDAIQIFKEMPERNV----VSWNALIS 516
+ I++S + + A + L+D G ++ A + E+NV ++ LI
Sbjct: 639 AFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 698
Query: 517 AYASNGDGEATLKLFEEMVLLGYQ 540
A+ GD E +KLF +++ G+
Sbjct: 699 AHCVKGDPEMAVKLFHQLLHRGFN 722
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 197/460 (42%), Gaps = 36/460 (7%)
Query: 196 LYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFM---EMRDLGFETSDFTFQAVLYAGIG 252
+YKE+ ++ TY+ ++ G + ++A+ LF+ E +D+G F Y +G
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLG 236
Query: 253 LDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMP----ELDGVS 308
D+A + +K L+ +V+ N L++ + EA +L M E D V+
Sbjct: 237 FVDMA--KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 309 YNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAI 368
YN++ + G+I + + R + + +L + ++ MG L +
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 369 VTTAD-SEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHF 423
+ + ++ + ++ K R +EA +F ++ + P ++ +I + G F
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 424 EESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSAL 483
+ +L L+ EM + + T ++L + + L +I SG I + +
Sbjct: 415 DMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIV 474
Query: 484 VDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISAYASNGDGEATLKLFEEMVLLGY 539
+D YAK G +++A+++FK + E +V ++N+LI Y + K+ + + L G
Sbjct: 475 IDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL 534
Query: 540 QPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAE 599
P VS+ + A ++ G + + K + P Y+ I LCR K +
Sbjct: 535 APSVVSYTTLMDAYANCGNTKS-IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 600 KLIAEMPFD---------------PDEIMWSSILNS-CRI 623
++ E F+ PD+I +++I+ CR+
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 133/603 (22%), Positives = 243/603 (40%), Gaps = 93/603 (15%)
Query: 94 EIFDSMVERNAVTYTLLIGGYSKSDQFIEAFKLFVRMCR-SGTKPDYVTFVTLLSGCNDP 152
+++ + ++N TY+ ++ G + + +A LF+R P V+F +++SG
Sbjct: 177 DVYKEIKDKNEHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKL 235
Query: 153 KMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKM----HCVDLASQLYKEMPQRDSVTY 208
+ V+K G +V N LI+ C + ++LAS + K + DSVTY
Sbjct: 236 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 295
Query: 209 NALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQI------ 262
N L G+ G A ++ +M D G T+ +L L +I G +
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 263 HGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLI 322
G+ + + + +V +L K + EA LF +M + DG+S +++ + GL
Sbjct: 356 RGFELNSIIPCSV-----MLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIVIHGLC 409
Query: 323 K-ESINLFRKLQFTKYDRRNFP-----FATMLSLAANMLDLQMGRQLHSQAIVTTADSEV 376
K ++ L D+R P A +L L + L+ R L I + ++
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE-ARSLLDSLISSGETLDI 468
Query: 377 LVANALVDMYAKCRRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRD 436
++ N ++D YAK +G EE+L+LF +
Sbjct: 469 VLYNIVIDGYAK-------------------------------SGCIEEALELFKVVIET 497
Query: 437 NVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDA 496
+T ATF S++ +I+ +++ I G S+ + + L+D YA CG+ K
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 497 IQIFKEM-----PERNV---VSWNALISAYA-SNGDGEATLKLFE-------EMVLLGYQ 540
++ +EM P NV V + L + N + ++FE +M G
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 541 PDSVS------FLCVFTACSHWGLVEEGLRYFNSMTKVYKLVPKREHYASIVDVLCRSGK 594
PD ++ +LC S G F + K L Y ++D LC G
Sbjct: 618 PDQITYNTIIQYLCRVKHLS-------GAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 595 FDKAEKLI---AEMPFDPDEIMWSSILNSCRIHKNQDLAKRAAEQL----FNMEVLRDAA 647
KA+ I E + +++++ + + + ++A + QL FN+ + RD +
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI-RDYS 729
Query: 648 PYV 650
+
Sbjct: 730 AVI 732
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 182/463 (39%), Gaps = 87/463 (18%)
Query: 52 LVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSMVER----N 103
L +TG++ EA LF+QM + ++ +++I G K GK +A ++D M ++ N
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 104 AVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHS 163
+ T+ L+ G + +EA L + SG D V + ++ G I+ ++
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 164 HVVKLGHDSAVIICNSLIDSYCKMHCVDLAS------QLYKEMPQRDSVTYNALIAGYAN 217
V++ G +V NSLI YCK + A +LY P V+Y L+ YAN
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS--VVSYTTLMDAYAN 550
Query: 218 EGFNKEAIKLFMEMRDLGFETSDFTFQAVLYA---------------------------- 249
G K +L EM+ G ++ T+ +
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRD 610
Query: 250 ----GIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELD 305
GI D I + I Y + + FV L+ ++++R L +
Sbjct: 611 MESEGIPPDQITYNTIIQ-YLCRVKHLSGAFV---FLE-------IMKSRNL-----DAS 654
Query: 306 GVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHS 365
+YN++I + G I+++ + LQ F + T++ D +M +L
Sbjct: 655 SATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Query: 366 QAIVTTADSEVLVANALVDMYAKCRR------PEEAERIFVKLSSRCTVPWTAMISANVQ 419
Q + + + +A+++ CRR P ++ + +S+ + + ++SAN
Sbjct: 715 QLLHRGFNVSIRDYSAVINRL--CRRHLMNCFPGQSNGVCCLISNERSFVYCPILSANC- 771
Query: 420 NGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGK 462
RR ++ ++ + +LK + L G+
Sbjct: 772 --------------RRHTLSVEKLSHEVLLKMKSQLGQKRTGE 800
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/283 (16%), Positives = 127/283 (44%), Gaps = 17/283 (6%)
Query: 390 RRPEEAERIFVKLSSRCTVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVL 449
R ++ ++ ++ + ++ ++ + E+++ ++ +F S++
Sbjct: 170 RETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 229
Query: 450 KASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV- 508
L + + K +++ G + S+Y+ + L++ GS+ +A+++ +M + V
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 509 ---VSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRY 565
V++N L + G ++ +M+ G PD +++ + G ++ GL
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 566 FNSMT----KVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFD---PDEIMWSSIL 618
M ++ ++P + ++ LC++G+ D+A L +M D PD + +S ++
Sbjct: 350 LKDMLSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 619 NS-CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAG 660
+ C++ K D+A +++ + +L ++ + + L + G
Sbjct: 406 HGLCKLGKF-DMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 33 IVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGK 88
+++TG PS + N I +T ++EAR++ D + + +S ++ Y G
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 89 LSIAKEIFDSM----VERNAVTYTLLIGGYSKS-----------DQFIEAFKLFVR-MCR 132
E+ M + VTY+++ G + ++ E K +R M
Sbjct: 554 TKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Query: 133 SGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDL 192
G PD +T+ T++ K + G F + D++ N LIDS C +
Sbjct: 614 EGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRK 673
Query: 193 A-SQLYKEMPQRDSVT---YNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVL 247
A S +Y Q S++ Y LI + +G + A+KLF ++ GF S + AV+
Sbjct: 674 ADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 226/488 (46%), Gaps = 29/488 (5%)
Query: 69 PYRNTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQFIEAF 124
P+R++ +S ++S K G++ A++I SM E + ++Y LI G+ ++ I +
Sbjct: 54 PHRSSFNS--VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD-IRSA 110
Query: 125 KLFVRMCRSG----TKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKLGHDSAVIICNSL 180
L + R+ KPD V+F +L +G + KM+ +F V+ V+ V+ ++
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTW 169
Query: 181 IDSYCKMHCVDLASQLYKEMPQRDS-----VTYNALIAGYANEGFNKEAIKLFMEMRDLG 235
ID++CK + LA + + M +RD+ VT+ LI GY G + A+ L+ EMR +
Sbjct: 170 IDTFCKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 236 FETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLD-FYSKHDCLVEA 294
+ T+ A++ ++ ++++ V+ + N V ++D F+ + D A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS-DNA 287
Query: 295 RKLFYKM----PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSL 350
K KM LD +Y ++I+ G +KE+ + ++ + F TM++
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 351 AANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVPW 410
++ ++ + I + +V+ + ++D AK + EA ++ + V +
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-IVYFCIEKANDVMY 406
Query: 411 TAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIR 470
T +I A + G F E +LFS++ + D+ + S + ++ +L + +++
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 471 SGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPERNV----VSWNALISAYASNGDGEA 526
G + + A + L+ A G + +A Q+F EM + ++ LI AY G+ A
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526
Query: 527 TLKLFEEM 534
L +M
Sbjct: 527 ASDLLLDM 534
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 119/621 (19%), Positives = 239/621 (38%), Gaps = 108/621 (17%)
Query: 122 EAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSHVVKL---------GHDS 172
EA + R+ +S PD T CN K I L + ++ L G+
Sbjct: 4 EALQFLSRLRKSSNLPDPFT-------CN--KHIHQLINSNCGILSLKFLAYLVSRGYTP 54
Query: 173 AVIICNSLIDSYCKMHCVDLASQLYKEMP----QRDSVTYNALIAGYANEGFNKEAIKLF 228
NS++ CK+ V A + MP + D ++YN+LI G+ G + A +
Sbjct: 55 HRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVL 114
Query: 229 MEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALL------ 282
+R + F + D ++F +G++ K ++ VFV ++
Sbjct: 115 ESLR----ASHGFICKP--------DIVSFNSLFNGFS-KMKMLDEVFVYMGVMLKCCSP 161
Query: 283 ---------DFYSKHDCLVEARKLFYKM------PELDGVSYNMMITAYAWTGLIKESIN 327
D + K L A K F+ M P + V++ +I Y G ++ +++
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNV--VTFTCLIDGYCKAGDLEVAVS 219
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYA 387
L+++++ + + ++ ++Q +++S+ + + LV ++D +
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 388 KCRRPEEAERIFVKLSSRC----TVPWTAMISANVQNGHFEESLKLFSEMRRDNVTADQA 443
+ + A + K+ ++ + +IS NG +E+ ++ +M + ++ D
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 444 TFASVLKASANLASISLGKQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEM 503
F +++ A + ++ +I GF + A S ++D AK G L +AI F +
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC-I 398
Query: 504 PERNVVSWNALISAYASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGL 563
+ N V + LI A GD +LF ++ G
Sbjct: 399 EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAG------------------------- 433
Query: 564 RYFNSMTKVYKLVPKREHYASIVDVLCRSGKFDKAEKLIAEMPFDP---DEIMWSSILNS 620
LVP + Y S + LC+ G A KL M + D + +++++
Sbjct: 434 -----------LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482
Query: 621 CRIHKNQDLAKRAAEQLFNMEVLRDAAPYVTMSNILAEAGQWESVGKVKKAMRERGLTKV 680
A++ +++ N + D+A + + + G + + M+ RGL V
Sbjct: 483 LASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL--V 540
Query: 681 PAYSWVEIKHKVHIFCANDKN 701
A S + + C N+ N
Sbjct: 541 TAVSDADCSKQ----CGNEVN 557
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 22/286 (7%)
Query: 54 QTGQLSEARELFDQMPYRNTISSNV-----MISGYLKEGKLSIAKEIFDSM----VERNA 104
++G+L A + F M R+ +S NV +I GY K G L +A ++ M + N
Sbjct: 175 KSGELQLALKSFHSMK-RDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNV 233
Query: 105 VTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSGCNDPKMIKGLFQVHSH 164
VTYT LI G+ K + A +++ RM +P+ + + T++ G + +
Sbjct: 234 VTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK 293
Query: 165 VVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALIAGYANEGF 220
++ G + +I C + A+++ ++M + D V + ++ Y G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 221 NKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTL-IWNVFVGN 279
K A+ ++ ++ + GFE V+ +D IA Q+H V + N +
Sbjct: 354 MKAAVNMYHKLIERGFEPD------VVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYT 407
Query: 280 ALLDFYSKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKES 325
L+D K +E +LF K+ E V M T++ GL K+
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI-AGLCKQG 452
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 32 RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQMPYRNTISSNVMISGYLKEGKLSI 91
++++ GF+P + I + + GQL EA F + N + V+I KEG
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVMYTVLIDALCKEGDFIE 421
Query: 92 AKEIFDSMVERNAV----TYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLS 147
+ +F + E V YT I G K ++AFKL RM + G D + + TL+
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 148 GCNDPKMIKGLFQVHSHVVKLG--HDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRDS 205
G ++ QV ++ G DSAV + LI +Y K + AS L +M +R
Sbjct: 482 GLASKGLMVEARQVFDEMLNSGISPDSAVF--DLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Query: 206 VT 207
VT
Sbjct: 540 VT 541
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 117/542 (21%), Positives = 227/542 (41%), Gaps = 102/542 (18%)
Query: 57 QLSEARELFDQM----PYRNTISSNVMISGYLKEGK--LSIAKEIFDSMV----ERNAVT 106
+L +A LF M P + N ++S K K L I+ + M+ E + VT
Sbjct: 22 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81
Query: 107 YTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLL-------------------- 146
+ L+ GY + +A L +M G +PD +TF TL+
Sbjct: 82 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141
Query: 147 -SGCNDPKM------IKGL---------FQVHSHVVKLGHDSAVIICNSLIDSYCKMHCV 190
GC P + + GL F + + + ++ V+I N++IDS CK V
Sbjct: 142 QRGCQ-PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200
Query: 191 DLASQLYKEMPQR----DSVTYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAV 246
D A L+KEM + + VTY++LI+ + G +A +L +M + + TF A+
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260
Query: 247 LYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKM----- 301
+ A + +++H +K ++ ++F N+L++ + HD L +A+++F M
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 302 -PELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMG 360
P+LD +YN +I + + +++ LFR++
Sbjct: 321 FPDLD--TYNTLIKGFCKSKRVEDGTELFREMS--------------------------- 351
Query: 361 RQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISA 416
H + T L+ D C + A+++F ++ S P ++ ++
Sbjct: 352 ---HRGLVGDTVTYTTLIQGLFHD--GDC---DNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Query: 417 NVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLGKQLHSYIIRSGFMSS 476
NG E++L++F M++ + D + ++++ + G L + G +
Sbjct: 404 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 463
Query: 477 IYAGSALVDMYAKCGSLKDAIQIFKEMPERNVV----SWNALISAYASNGDGEATLKLFE 532
+ + ++ L++A + K+M E + ++N LI A+ +GD A+ +L
Sbjct: 464 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 523
Query: 533 EM 534
EM
Sbjct: 524 EM 525
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 192/466 (41%), Gaps = 61/466 (13%)
Query: 178 NSLIDSYCKMHCVDLA------SQLYKEMPQRDSVTYNALIAGYANEGFNKEAIKLFMEM 231
N L+ + KM DL ++ K + VT ++L+ GY + +A+ L +M
Sbjct: 46 NKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 105
Query: 232 RDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLIWNVFVGN------ALLDFY 285
++G+ TF TTLI +F+ N AL+D
Sbjct: 106 VEMGYRPDTITF-------------------------TTLIHGLFLHNKASEAVALVDRM 140
Query: 286 SKHDCLVEARKLFYKMPELDGVSYNMMITAYAWTGLIKESINLFRKLQFTKYDRRNFPFA 345
+ C P L V+Y +++ G I + NL K++ K + F
Sbjct: 141 VQRGC----------QPNL--VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188
Query: 346 TMLSLAANMLDLQMGRQLHSQAIVTTADSEVLVANALVDMYAKCRRPEEAERIFVKLSSR 405
T++ + L + V+ ++L+ R +A ++ + +
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248
Query: 406 CTVP----WTAMISANVQNGHFEESLKLFSEMRRDNVTADQATFASVLKASANLASISLG 461
P + A+I A V+ G F E+ KL +M + ++ D T+ S++ +
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308
Query: 462 KQLHSYIIRSGFMSSIYAGSALVDMYAKCGSLKDAIQIFKEMPER----NVVSWNALISA 517
KQ+ +++ + + L+ + K ++D ++F+EM R + V++ LI
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368
Query: 518 YASNGDGEATLKLFEEMVLLGYQPDSVSFLCVFTACSHWGLVEEGLRYFNSMTKVYKLVP 577
+GD + K+F++MV G PD +++ + + G +E+ L F+ M K ++
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKL 427
Query: 578 KREHYASIVDVLCRSGKFDKAEKLIAEMPF---DPDEIMWSSILNS 620
Y ++++ +C++GK D L + P+ + ++++++
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 473
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 198/497 (39%), Gaps = 99/497 (19%)
Query: 13 LSSLAAKNSYPNVKTCIDA-----RIVKTGFDPSTSRSNYQIMDLVQTGQLSEARELFDQ 67
LSSL N Y + K DA ++V+ G+ P T I L + SEA L D+
Sbjct: 82 LSSLL--NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 139
Query: 68 MPYR----NTISSNVMISGYLKEGKLSIAKEIFDSM----VERNAVTYTLLIGGYSKSDQ 119
M R N ++ V+++G K G + +A + + M +E + V + +I K
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199
Query: 120 FIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CN-------------------DPKMI---- 155
+A LF M G +P+ VT+ +L+S C+ +P ++
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259
Query: 156 -------KGLF----QVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQRD 204
+G F ++H ++K D + NSLI+ +C +D A Q+++ M +D
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319
Query: 205 SV----TYNALIAGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQ 260
TYN LI G+ ++ +LF EM G T+
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY----------------- 362
Query: 261 QIHGYAVKTTLIWNVFVGNALLDFYSKHDCLVEARKLFYKMPELDGV-----SYNMMITA 315
TTLI +F DC A+K+F +M DGV +Y++++
Sbjct: 363 --------TTLIQGLF---------HDGDC-DNAQKVFKQMVS-DGVPPDIMTYSILLDG 403
Query: 316 YAWTGLIKESINLFRKLQFTKYDRRNFPFATMLSLAANMLDLQMGRQLHSQAIVTTADSE 375
G +++++ +F +Q ++ + + TM+ + G L +
Sbjct: 404 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 463
Query: 376 VLVANALVDMYAKCRRPEEAERIFVKLSSRCTVP----WTAMISANVQNGHFEESLKLFS 431
V+ N ++ R +EA + K+ +P + +I A++++G S +L
Sbjct: 464 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 523
Query: 432 EMRRDNVTADQATFASV 448
EMR D +T V
Sbjct: 524 EMRSCRFVGDASTIGLV 540
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 166/363 (45%), Gaps = 28/363 (7%)
Query: 46 NYQIMDLVQTGQLSEARELFDQMPYR----NTISSNVMISGYLKEGKLSIAKEIFDSMVE 101
N I L + + +A LF +M + N ++ + +IS G+ S A ++ M+E
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247
Query: 102 R----NAVTYTLLIGGYSKSDQFIEAFKLFVRMCRSGTKPDYVTFVTLLSG-CNDPKMIK 156
+ N VT+ LI + K +F+EA KL M + PD T+ +L++G C ++ K
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307
Query: 157 GLFQVHSHVVKLGHDSAVIICNSLIDSYCKMHCVDLASQLYKEMPQR----DSVTYNALI 212
Q+ +V + N+LI +CK V+ ++L++EM R D+VTY LI
Sbjct: 308 AK-QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 366
Query: 213 AGYANEGFNKEAIKLFMEMRDLGFETSDFTFQAVLYAGIGLDDIAFGQQIHGYAVKTTLI 272
G ++G A K+F +M G T+ +L + ++ Y K+ +
Sbjct: 367 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 426
Query: 273 WNVFVGNALLDFYSKHDCLVEARKLFYKMPELDG-----VSYNMMITAYAWTGLIKESIN 327
++++ +++ K + + LF + L G V+YN MI+ L++E+
Sbjct: 427 LDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485
Query: 328 LFRKLQFTKYDRRNFPFATMLSLAANMLD------LQMGRQLHSQAIVTTADSEVLVANA 381
L +K++ + + T++ A++ D ++ R++ S V A + LVAN
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIR--AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANM 543
Query: 382 LVD 384
L D
Sbjct: 544 LHD 546