Jatropha Genome Database
- JcCB0067191.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0067191.20 - phase: 0 /pseudo/partial
(323 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50250.1 | Symbols: FTSH1 | FTSH1 (FtsH protease 1); ATP-depe... 354 4e-98
AT5G42270.1 | Symbols: VAR1, FTSH5 | VAR1 (VARIEGATED 1); ATP-de... 328 3e-90
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FTSH PROTEASE 6);... 113 2e-25
AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2); ATP-de... 112 4e-25
AT2G26140.1 | Symbols: ftsh4 | ftsh4 (FtsH protease 4); ATP-depe... 111 6e-25
AT1G06430.1 | Symbols: FTSH8 | FTSH8; ATP-dependent peptidase/ A... 110 1e-24
AT5G53170.1 | Symbols: FTSH11 | FTSH11 (FtsH protease 11); ATP-d... 96 4e-20
AT1G07510.1 | Symbols: ftsh10 | ftsh10 (FtsH protease 10); ATP b... 88 8e-18
AT2G29080.1 | Symbols: ftsh3 | ftsh3 (FtsH protease 3); ATP-depe... 86 2e-17
AT1G79560.1 | Symbols: EMB1047, FTSH12 | FTSH12 (FTSH PROTEASE 1... 76 2e-14
AT5G58870.1 | Symbols: ftsh9 | ftsh9 (FtsH protease 9); ATP-depe... 59 3e-09
AT3G47060.1 | Symbols: ftsh7 | ftsh7 (FtsH protease 7); ATP-depe... 55 5e-08
AT4G23940.1 | Symbols: | FtsH protease, putative | chr4:1243710... 48 9e-06
>AT1G50250.1 | Symbols: FTSH1 | FTSH1 (FtsH protease 1);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr1:18614398-18616930 REVERSE
Length = 716
Score = 354 bits (909), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 168/183 (91%), Positives = 179/183 (97%)
Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
+MPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF
Sbjct: 534 LMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 593
Query: 201 GQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMA 260
G +NVTTGASNDFMQVSRVARQM+ERFGFSKKIGQVA+GGPGGNPF+GQQMSSQKDYSMA
Sbjct: 594 GDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMA 653
Query: 261 TADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 320
TAD+VDAEVRELVE+AY RA IITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL
Sbjct: 654 TADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAEL 713
Query: 321 FVA 323
+++
Sbjct: 714 YIS 716
>AT5G42270.1 | Symbols: VAR1, FTSH5 | VAR1 (VARIEGATED 1);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr5:16902659-16905102 FORWARD
Length = 704
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 170/183 (92%), Positives = 177/183 (96%)
Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
+MPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF
Sbjct: 522 LMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 581
Query: 201 GQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMA 260
G +NVTTGASNDFMQVSRVARQMVERFGFSKKIGQVA+GG GGNPFLGQ MSSQKDYSMA
Sbjct: 582 GDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMA 641
Query: 261 TADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAEL 320
TADVVDAEVRELVE+AY RAK IITT IDILHKLAQLLIEKETVDGEEFMSLFIDG+AEL
Sbjct: 642 TADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQAEL 701
Query: 321 FVA 323
+V+
Sbjct: 702 YVS 704
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FTSH PROTEASE 6);
ATP-dependent peptidase/ ATPase/ metallopeptidase/
peptidase/ zinc ion binding | chr5:4950411-4952777
REVERSE
Length = 688
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 107/174 (61%), Gaps = 13/174 (7%)
Query: 145 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDN 204
+DPV K++++PRGQA GLT+F P E+ L S+ L ++ LGGR AE+VIFG+
Sbjct: 499 HDPVQKVTLVPRGQARGLTWFLPGEDPT---LVSKQQLFARIVGGLGGRAAEDVIFGEPE 555
Query: 205 VTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQ-----QMSSQKDYSM 259
+TTGA+ D QV+ +ARQMV FG S +IG A+ +P + Q +M ++ S
Sbjct: 556 ITTGAAGDLQQVTEIARQMVTMFGMS-EIGPWAL----TDPAVKQNDVVLRMLARNSMSE 610
Query: 260 ATADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLF 313
A+ +D+ V++++ AY AK + + + + KL +L+EKET+ G+EF ++
Sbjct: 611 KLAEDIDSCVKKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDEFRAIL 664
>AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2);
ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc
ion binding | chr2:13174692-13177064 FORWARD
Length = 695
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
+ P +D V K+++IPRGQA GLT+F PS++ L S+ L ++ LGGR AEE+IF
Sbjct: 498 LTPGHDAVQKVTLIPRGQARGLTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEIIF 554
Query: 201 GQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMA 260
G VTTGA D Q++ +ARQMV FG S IG ++ + +M ++ S
Sbjct: 555 GDSEVTTGAVGDLQQITGLARQMVTTFGMS-DIGPWSLMDSSAQSDVIMRMMARNSMSEK 613
Query: 261 TADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLF 313
A+ +D+ V++L + AY A I + + + KL ++L+EKET+ G+EF ++
Sbjct: 614 LAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAIL 666
>AT2G26140.1 | Symbols: ftsh4 | ftsh4 (FtsH protease 4);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr2:11131939-11135126 REVERSE
Length = 717
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 13/169 (7%)
Query: 147 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVT 206
PV K +I+PRG A G+ P ++ SR + ++ V +GGRVAEE+IFG+ VT
Sbjct: 502 PVHKATIVPRGMALGMVSQLPDKDETS---ISRKQMLARLDVCMGGRVAEELIFGESEVT 558
Query: 207 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVD 266
+GAS+D Q +++AR MV +FG SK++G VA G+ MS++ T +++
Sbjct: 559 SGASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDN----GKSMSTE------TRLLIE 608
Query: 267 AEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLFID 315
+EV++L+E+AY AK I+T + LH LA L++ ET+ G++ L D
Sbjct: 609 SEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTD 657
>AT1G06430.1 | Symbols: FTSH8 | FTSH8; ATP-dependent peptidase/
ATPase/ metallopeptidase/ zinc ion binding |
chr1:1960214-1962525 REVERSE
Length = 685
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
+ P +D V K+++IPRGQA GLT+F PS++ L S+ L ++ LGGR AEEVIF
Sbjct: 491 LTPGHDAVQKVTLIPRGQARGLTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEVIF 547
Query: 201 GQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMA 260
G+ VTTGA +D Q++ +A+QMV FG S +IG ++ + +M ++ S
Sbjct: 548 GESEVTTGAVSDLQQITGLAKQMVTTFGMS-EIGPWSLMDSSEQSDVIMRMMARNSMSEK 606
Query: 261 TADVVDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLF 313
A+ +D V+ L ++AY A I + + + K+ ++L+EKET+ G+EF ++
Sbjct: 607 LANDIDTAVKTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAIL 659
>AT5G53170.1 | Symbols: FTSH11 | FTSH11 (FtsH protease 11);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr5:21563023-21567922 REVERSE
Length = 806
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 18/168 (10%)
Query: 147 PVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVT 206
P+ K +I+PRG A G+ PS + E+ + R L ++ V +GGRVAEE+IFG D++T
Sbjct: 636 PIHKATIMPRGSALGMVTQLPSND--ETSVSKRQLLA-RLDVCMGGRVAEELIFGLDHIT 692
Query: 207 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVD 266
TGAS+D Q + +A+ MV G S+ IG V I ++ S +D
Sbjct: 693 TGASSDLSQATELAQYMVSSCGMSEAIGPVHI---------------KERPSSDMQSRID 737
Query: 267 AEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSLFI 314
AEV +L+ AY R K ++ H LH LA L+E ET+ E+ + +
Sbjct: 738 AEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRILL 785
>AT1G07510.1 | Symbols: ftsh10 | ftsh10 (FtsH protease 10); ATP
binding / ATPase/ metalloendopeptidase/
nucleoside-triphosphatase/ nucleotide binding / zinc ion
binding | chr1:2305689-2309380 FORWARD
Length = 813
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 15/168 (8%)
Query: 146 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDN 204
+P+ K++I+PRG A G + P+E L ++ L + + LGGR AE+V+ G+
Sbjct: 607 EPLLKVTIVPRGTAALGFAQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLIGR-- 660
Query: 205 VTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADV 264
++TGA ND +V+++ V +GFS KIG ++ F ++ K YS T +
Sbjct: 661 ISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLS--------FPQREDEFSKPYSNRTGAM 712
Query: 265 VDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSL 312
+D EVRE V +AY R +I H + + ++A+LL+EKE + ++ +
Sbjct: 713 IDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKV 760
>AT2G29080.1 | Symbols: ftsh3 | ftsh3 (FtsH protease 3);
ATP-dependent peptidase/ ATPase | chr2:12489911-12492999
REVERSE
Length = 809
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 13/168 (7%)
Query: 146 DPVAKISIIPRGQAG-GLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDN 204
+P+ K++I+PRG A G + P+E L ++ L + + LGGR AE+V+ G+
Sbjct: 601 EPLLKVTIVPRGTAALGFAQYVPNENLL----MTKEQLFDMTCMTLGGRAAEQVLIGK-- 654
Query: 205 VTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADV 264
++TGA ND +V+++ V +GFS K+G ++ P K YS T +
Sbjct: 655 ISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSF------PPRDDGYDFSKPYSNKTGAI 708
Query: 265 VDAEVRELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGEEFMSL 312
+D EVR+ V +AY R ++ H + ++A+LL+EKE + ++ + +
Sbjct: 709 IDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKI 756
>AT1G79560.1 | Symbols: EMB1047, FTSH12 | FTSH12 (FTSH PROTEASE 12);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr1:29926976-29932308 FORWARD
Length = 1008
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 141 IMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIF 200
+ P +D A ++P G+ ++ F P E+ ++ G + Y++ QM VA GGR AE V+F
Sbjct: 779 LFPRFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVF 838
Query: 201 GQDNVTTGASNDFMQVSRVARQMV-----ERFGFSKKIGQVAIGGPGGNPFLGQQMSSQK 255
G DNVT G +D +++++AR+MV R G ++ + ++ + NP G+ + +
Sbjct: 839 G-DNVTDGGKDDLEKITKIAREMVISPQSARLGLTQLVKKIGMVDLPDNP-DGELIKYRW 896
Query: 256 DYSMATADVVDAEVRELVERAYAR--------AKHIITTHIDILHKLAQLLIEKETVDGE 307
D+ + EV EL R R A + + + IL + + L+EK + G
Sbjct: 897 DHPHVMPAEMSVEVSELFTRELTRYIEETEELAMNALRANRHILDLITRELLEKSRITGL 956
Query: 308 E 308
E
Sbjct: 957 E 957
>AT5G58870.1 | Symbols: ftsh9 | ftsh9 (FtsH protease 9);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr5:23770080-23773719 REVERSE
Length = 806
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 21/160 (13%)
Query: 148 VAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVT 206
V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV++ ++
Sbjct: 615 VEKLSILPRSGGALGFTYIPPTHE--DRYLLFIDELHGRLVTLLGGRAAEEVVY-SGRIS 671
Query: 207 TGASNDFMQVSRVARQMVERFGFSKKIGQVAI-----GG---PGGNPFLGQQMSSQKDYS 258
TGA +D + + +A + V +G ++KIG V++ GG GG+P+ Q
Sbjct: 672 TGALDDIRRATDMAYKAVAEYGLNEKIGPVSVATLSAGGIDDSGGSPWGRDQGH------ 725
Query: 259 MATADVVDAEVRELVERAYARAKHIITTHIDILHKL-AQL 297
D+V EV L++ A A ++ + D+L L AQL
Sbjct: 726 --LVDLVQREVTNLLQSALDVALTVVRANPDVLEGLGAQL 763
>AT3G47060.1 | Symbols: ftsh7 | ftsh7 (FtsH protease 7);
ATP-dependent peptidase/ ATPase/ metallopeptidase |
chr3:17332999-17336613 FORWARD
Length = 802
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 16/188 (8%)
Query: 148 VAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVT 206
V K+SI+PR G A G T+ P+ E + L L ++ LGGR AEEV++ ++
Sbjct: 611 VEKLSILPRTGGALGFTYIPPTSE--DRYLLFIDELLGRLVTLLGGRAAEEVVY-SGRIS 667
Query: 207 TGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVD 266
TGA +D + + +A + V +G ++KIG V++ G S D+V
Sbjct: 668 TGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQ 727
Query: 267 AEVRELVERAYARAKHIITTHIDILHKL-AQLLIEKET-----------VDGEEFMSLFI 314
EV L++ A A ++ + D+L L AQL +++ V E +++F+
Sbjct: 728 KEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAVFV 787
Query: 315 DGKAELFV 322
+GK EL +
Sbjct: 788 EGKQELLL 795
>AT4G23940.1 | Symbols: | FtsH protease, putative |
chr4:12437108-12441841 FORWARD
Length = 946
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 23/175 (13%)
Query: 150 KISIIPRGQAGGLTFFAPSEERLESGLYSR-SYLENQMAVALGGRVAEEVIFGQDNVTTG 208
++SIIPRGQ F ++ ES ++ R L +++ V LGGR AEEVI+G D T+
Sbjct: 724 RVSIIPRGQTLSQVVFHRLDD--ESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSD--TSK 779
Query: 209 ASNDFMQ-VSRVARQMVERFGFSKKIGQVAIGGPGG--------NPFLGQQMSSQKDYSM 259
AS D++ S +AR+++ + + V G P P L + S DY +
Sbjct: 780 ASVDYLSDASWLARKILTIWNLENPM--VIHGEPPPWRKRPQFVGPRLDFEGSLYDDYDL 837
Query: 260 ATADV---VDAEV----RELVERAYARAKHIITTHIDILHKLAQLLIEKETVDGE 307
V +D EV EL+ + Y + ++ + L K ++L+ ++ + GE
Sbjct: 838 VEPPVNFNMDDEVAHRSEELISQMYNKTVSLLRQNQTALLKTVKVLLNQKEISGE 892