Jatropha Genome Database

JcCB0067131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0067131.10 - phase: 0 /partial
         (183 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16300.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   236   6e-63
AT5G16300.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   236   7e-63
AT5G16300.3 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   236   8e-63

>AT5G16300.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); Has
           204 Blast hits to 183 proteins in 76 species: Archae -
           0; Bacteria - 0; Metazoa - 127; Fungi - 34; Plants - 24;
           Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
           | chr5:5338119-5342186 FORWARD
          Length = 1068

 Score =  236 bits (602), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 118/191 (61%), Positives = 142/191 (74%), Gaps = 8/191 (4%)

Query: 1   MTVSSVSADD-RSATLS----GGGYRDAEALFRSKPISQIRNVEATTRKQIQDKKEELRQ 55
           M +SS SA + R + +S    GGG RDAE+LFR+KP+S+IR VE+ TRK I+DKKEELRQ
Sbjct: 1   MRMSSASAGEYRPSAVSLSSNGGGQRDAESLFRTKPMSEIRIVESATRKNIEDKKEELRQ 60

Query: 56  LVGNRYRDLIDSADSIVLMKSSCESISSNVAXXXXXXXXXXXXXXXETPKFTNSNPVRIR 115
           LVG RYRDLIDSADSIV MKS CESIS+N++               ETPK  + NPVR+ 
Sbjct: 61  LVGTRYRDLIDSADSIVHMKSLCESISANISSIHGNIRSLSSSSVAETPKLASLNPVRVN 120

Query: 116 IYGIACRVKYLVDTPENIWGCLDESMFLEAAGRYIRAKHVHYNLMQANNAN---AEWDHT 172
           +YGIACRVKYLVDTPENIWGCLDESMFLEAAGRY+RA+HV   L++        AE D +
Sbjct: 121 VYGIACRVKYLVDTPENIWGCLDESMFLEAAGRYMRAQHVQQRLIKLEGCGGGVAEVDQS 180

Query: 173 KILSNFPLLQH 183
           K+L+NFPLL+H
Sbjct: 181 KLLANFPLLEH 191


>AT5G16300.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); Has
           199 Blast hits to 182 proteins in 76 species: Archae -
           0; Bacteria - 0; Metazoa - 122; Fungi - 34; Plants - 24;
           Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
           | chr5:5338119-5342186 FORWARD
          Length = 1034

 Score =  236 bits (601), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 118/191 (61%), Positives = 142/191 (74%), Gaps = 8/191 (4%)

Query: 1   MTVSSVSADD-RSATLS----GGGYRDAEALFRSKPISQIRNVEATTRKQIQDKKEELRQ 55
           M +SS SA + R + +S    GGG RDAE+LFR+KP+S+IR VE+ TRK I+DKKEELRQ
Sbjct: 1   MRMSSASAGEYRPSAVSLSSNGGGQRDAESLFRTKPMSEIRIVESATRKNIEDKKEELRQ 60

Query: 56  LVGNRYRDLIDSADSIVLMKSSCESISSNVAXXXXXXXXXXXXXXXETPKFTNSNPVRIR 115
           LVG RYRDLIDSADSIV MKS CESIS+N++               ETPK  + NPVR+ 
Sbjct: 61  LVGTRYRDLIDSADSIVHMKSLCESISANISSIHGNIRSLSSSSVAETPKLASLNPVRVN 120

Query: 116 IYGIACRVKYLVDTPENIWGCLDESMFLEAAGRYIRAKHVHYNLMQANNAN---AEWDHT 172
           +YGIACRVKYLVDTPENIWGCLDESMFLEAAGRY+RA+HV   L++        AE D +
Sbjct: 121 VYGIACRVKYLVDTPENIWGCLDESMFLEAAGRYMRAQHVQQRLIKLEGCGGGVAEVDQS 180

Query: 173 KILSNFPLLQH 183
           K+L+NFPLL+H
Sbjct: 181 KLLANFPLLEH 191


>AT5G16300.3 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: Vps51/Vps67 (InterPro:IPR014812); Has
           201 Blast hits to 182 proteins in 75 species: Archae -
           0; Bacteria - 0; Metazoa - 125; Fungi - 34; Plants - 23;
           Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
           | chr5:5338119-5342068 FORWARD
          Length = 1029

 Score =  236 bits (601), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 118/191 (61%), Positives = 142/191 (74%), Gaps = 8/191 (4%)

Query: 1   MTVSSVSADD-RSATLS----GGGYRDAEALFRSKPISQIRNVEATTRKQIQDKKEELRQ 55
           M +SS SA + R + +S    GGG RDAE+LFR+KP+S+IR VE+ TRK I+DKKEELRQ
Sbjct: 1   MRMSSASAGEYRPSAVSLSSNGGGQRDAESLFRTKPMSEIRIVESATRKNIEDKKEELRQ 60

Query: 56  LVGNRYRDLIDSADSIVLMKSSCESISSNVAXXXXXXXXXXXXXXXETPKFTNSNPVRIR 115
           LVG RYRDLIDSADSIV MKS CESIS+N++               ETPK  + NPVR+ 
Sbjct: 61  LVGTRYRDLIDSADSIVHMKSLCESISANISSIHGNIRSLSSSSVAETPKLASLNPVRVN 120

Query: 116 IYGIACRVKYLVDTPENIWGCLDESMFLEAAGRYIRAKHVHYNLMQANNAN---AEWDHT 172
           +YGIACRVKYLVDTPENIWGCLDESMFLEAAGRY+RA+HV   L++        AE D +
Sbjct: 121 VYGIACRVKYLVDTPENIWGCLDESMFLEAAGRYMRAQHVQQRLIKLEGCGGGVAEVDQS 180

Query: 173 KILSNFPLLQH 183
           K+L+NFPLL+H
Sbjct: 181 KLLANFPLLEH 191