Jatropha Genome Database
- JcCB0065721.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0065721.30 - phase: 1 /partial
(109 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 9e-22
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-08
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-07
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 50 2e-07
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 50 3e-07
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-07
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-07
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-07
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 48 1e-06
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 2e-06
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 2e-06
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 2e-06
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 48 2e-06
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 47 2e-06
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 47 2e-06
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 47 2e-06
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 47 2e-06
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 3e-06
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 46 6e-06
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 46 6e-06
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 45 9e-06
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 45 9e-06
>AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4445461-4447290 FORWARD
Length = 609
Score = 98.2 bits (243), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 9 RIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCT 68
R+ DA+RL+ KMK GC+PN+WIYN L+DM GR LR+ EK+WKEMKR K+ PDKV+ T
Sbjct: 438 RLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYT 497
Query: 69 GVISAYNK 76
+ISAYN+
Sbjct: 498 SMISAYNR 505
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 9 RIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCT 68
R+ +A L +M++ G EPNV+ Y L+D G++ + +VE L +EM + + P+K+T T
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Query: 69 GVISAYNK 76
+I Y +
Sbjct: 755 VMIGGYAR 762
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R I +A+RL M+ G P V YN +L +R+ +L EM +KI PD +
Sbjct: 319 RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNI 378
Query: 66 TCTGVISAYNKLTCLLSS 83
TC +I+AY K+ ++S+
Sbjct: 379 TCNTLINAYCKIEDMVSA 396
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
++G++ +A + +MK+ GCEP+V Y +L + +L+ EM+ I PD +
Sbjct: 445 KQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSI 504
Query: 66 TCTGVISAYNK 76
C+ ++ A+NK
Sbjct: 505 ACSALMRAFNK 515
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
++G++ +A + +MK+ GCEP+V Y +L + +L+ EM+ I PD +
Sbjct: 577 KQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSI 636
Query: 66 TCTGVISAYNK 76
C+ ++ A+NK
Sbjct: 637 ACSALMRAFNK 647
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 4 MVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPD 63
++R G I + R++ MK++GC PNV+ Y +++ + + + EKL M+ ++P+
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 64 KVTCTGVISAY 74
VT T ++ Y
Sbjct: 651 HVTYTVMVKGY 661
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L + +K R + ++++ MK NGC PN +N +L + G + V ++++EMK
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGF 487
Query: 61 APDKVTCTGVISAYNKLTCLLSSS 84
PD+ T +ISAY + + +S
Sbjct: 488 EPDRDTFNTLISAYGRCGSEVDAS 511
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 4 MVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPD 63
+ R + DA+ L+ MK G P+V YN L+ N+L +V K + EMK + + PD
Sbjct: 273 LTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 64 KVT 66
VT
Sbjct: 333 TVT 335
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:5949006-5949644
REVERSE
Length = 212
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 4 MVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPD 63
+ + G+ +A + T + ++G +P+V YN ++ R +SL + EKL+ EM RR + PD
Sbjct: 24 LCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPD 79
Query: 64 KVTCTGVISA 73
+T +I
Sbjct: 80 TITYNSMIHG 89
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 7 KGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVT 66
KG+I DA R +M G E N+ YN L+D L + E L E+ R+ + PD T
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 67 CTGVISAYN 75
+IS Y
Sbjct: 602 YNSLISGYG 610
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L R G+ +++ +M+ C ++ YN L+++ G+ L ++E+L+ E+K +
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 61 APDKVTCTGVISAYNK 76
PD VT T I AY++
Sbjct: 506 RPDVVTWTSRIGAYSR 521
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 3 FMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAP 62
M RKG +A+ + +MK + C+P YN ++++ G+ + KL+ EM+ + P
Sbjct: 238 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 63 DKVTCTGVISAYNKLT-CLLSSSYYSQHKVKGSLLLLVPVYIFN 105
+ T T +++A+ + C + + Q + G L VY++N
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDG---LEPDVYVYN 338
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L V++G++++A L +M G PN+ YN L+D N L + + M R K
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354
Query: 61 APDKVTCTGVISAY 74
+PD VT T +I Y
Sbjct: 355 SPDIVTFTSLIKGY 368
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ G + A +L +M GC PN+ YN ++D+ + + + KL+++M+ PDKV
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 66 T 66
T
Sbjct: 541 T 541
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ G + A +L +M GC PN+ YN ++D+ + + + KL+++M+ PDKV
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 66 T 66
T
Sbjct: 541 T 541
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTC 67
GR D +L+ M PNV ++ L+D + LR+ E+L KEM R IAPD +T
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 68 TGVISAYNK 76
T +I + K
Sbjct: 372 TSLIDGFCK 380
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 10 IRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCTG 69
+R+A L M G P+++ Y ++ R+N L++ E L+++MK+R I PD VT T
Sbjct: 607 VREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTV 666
Query: 70 VISAYNKL 77
++ Y KL
Sbjct: 667 LLDRYLKL 674
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTC 67
GR DA RL++ M PNV +N L+D + L + EKL+ EM +R I P+ VT
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 68 TGVISAY 74
+I+ +
Sbjct: 349 NSLINGF 355
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 40/71 (56%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R + A+++ M+ + C+P++W YN ++ + GR + E+L+ E++ + PD V
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 66 TCTGVISAYNK 76
T ++ A+ +
Sbjct: 369 TYNSLLYAFAR 379
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R G + +A++L +M P V YN LL R+ + V LWK M +R + D++
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 66 TCTGVISAYNKL 77
+C+ ++ A KL
Sbjct: 473 SCSTLLEALFKL 484
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R G + +L+ MK G +PN +IY ++ + R+ L + E+ + EM R+ I PD V
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 66 TCTGVISAYNKLTCLLSSS--YYSQH 89
T +I + K + ++S +Y H
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMH 821
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R G + +L+ MK G +PN +IY ++ + R+ L + E+ + EM R+ I PD V
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 66 TCTGVISAYNKLTCLLSSS--YYSQH 89
T +I + K + ++S +Y H
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMH 821
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 1 LQFMV---RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKR 57
+Q MV +K + + + L+ KMK GC P++ IYN ++ + ++ +++ +LW EM+
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEA 440
Query: 58 RKIAPDKVTCTGVISAYNKLTCLLSSSYYSQHKV 91
++P T +I+ + L+ + + + V
Sbjct: 441 NGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
+Q RKG I AM L +M GC +V YN +L + L + +KL+ EM R +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 61 APDKVTCTGVISAYNKL 77
PD T T +I + KL
Sbjct: 477 FPDSYTLTILIDGHCKL 493
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTC 67
G I +A++L+++M NGCEP+V + N L++ + + + + K++ MK K+ P VT
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 68 TGVISAYNK 76
+++ K
Sbjct: 577 NTLLAGLGK 585
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 9 RIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCT 68
R+ A L +M V GC+PN+ YN LLD + + L+ +MK++ + PD +T T
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYT 621
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI-APDKVT 66
G+ A+ L+ M GCEP++ YN L+ + N L + +++K++K + +PD VT
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 67 CTGVISAYNK 76
T +IS Y K
Sbjct: 280 YTSMISGYCK 289
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 45.1 bits (105), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI-APDKVT 66
G+ A+ L+ M GCEP++ YN L+ + N L + +++K++K + +PD VT
Sbjct: 220 GKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVT 279
Query: 67 CTGVISAYNK 76
T +IS Y K
Sbjct: 280 YTSMISGYCK 289