Jatropha Genome Database
- JcCB0065721.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0065721.20 - phase: 0
(625 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G15820.1 | Symbols: OTP51 | OTP51 (ORGANELLE TRANSCRIPT PROCE... 765 0.0
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 81 2e-15
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 70 4e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 68 1e-11
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 68 2e-11
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 68 2e-11
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 9e-11
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 9e-11
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 65 1e-10
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 64 4e-10
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 62 9e-10
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 61 2e-09
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 61 2e-09
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 61 2e-09
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 3e-09
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 60 3e-09
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 59 8e-09
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 59 8e-09
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 58 2e-08
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 58 2e-08
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 57 4e-08
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 5e-08
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 56 8e-08
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 9e-08
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 54 2e-07
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 54 3e-07
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 53 7e-07
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 52 8e-07
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 52 1e-06
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 52 1e-06
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G76280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 51 2e-06
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 50 3e-06
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 50 4e-06
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 50 4e-06
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 50 5e-06
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 50 5e-06
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-06
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 5e-06
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 49 8e-06
AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
>AT2G15820.1 | Symbols: OTP51 | OTP51 (ORGANELLE TRANSCRIPT
PROCESSING 51); RNA splicing factor, transesterification
mechanism | chr2:6888734-6891360 REVERSE
Length = 849
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/606 (58%), Positives = 469/606 (77%), Gaps = 5/606 (0%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSA- 59
M QQ+WYRFDF L+TKLA+Y+GKE KF KCRE+FDD++NQGRVPSESTFHILV+AYLS+
Sbjct: 228 MTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHILVVAYLSSL 287
Query: 60 PVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVT 119
V+GCL+EACS+YNRMIQLGGYKPRLSLHNSLFRALV+K LKQAEFIFHN+VT
Sbjct: 288 SVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQAEFIFHNVVT 347
Query: 120 SGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDV 179
+GLE+QK IY GLIWLHS QD +D RI SLREEMK AG +E ++V++S+LRA +K+G V
Sbjct: 348 TGLEVQKDIYSGLIWLHSCQDEVDIGRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGV 407
Query: 180 EEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKI 239
EE E TWL+LL +D G P+QAFVY++E ++KVG+ K++EIFREM++ +G +++GYHKI
Sbjct: 408 EEVERTWLELLDLDCGIPSQAFVYKIEAYSKVGDFAKAMEIFREMEKHIGGATMSGYHKI 467
Query: 240 IEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCR 299
IEVLC+ Q+++L E+LM+EF ESG KPL+PSF E+ +Y +L LH+KLE F CL+KC+
Sbjct: 468 IEVLCKVQQVELVETLMKEFEESGKKPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQ 527
Query: 300 PNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAEN 359
P++ IYN+YLDSL K+GNL+KA ++F + + + V+ RSCN +L YL G+ V+AE
Sbjct: 528 PSQPIYNIYLDSLTKIGNLEKAGDVFNEMKNNGTINVSARSCNSLLKGYLDCGKQVQAER 587
Query: 360 VYNLMCQKKYDIEPSLMQKLDYVLSLSRKEVKK-PVSLKMSKNQREIXXXXXXXXXQIES 418
+Y+LM KKY+IEP LM+KLDY+LSL +KEVKK P S+K+SK+QRE+ QIES
Sbjct: 588 IYDLMRMKKYEIEPPLMEKLDYILSLKKKEVKKRPFSMKLSKDQREVLVGLLLGGLQIES 647
Query: 419 DEERKRHMIRFEFNENSSVHSVLRRHLYDEYHEWLHPSCKLNDGSDDISYRFSTISHSYF 478
D+E+K HMI+FEF ENS H VL+++++D++ EWLHP + D I + F ++ HSYF
Sbjct: 648 DKEKKSHMIKFEFRENSQAHLVLKQNIHDQFREWLHPLSNFQE--DIIPFEFYSVPHSYF 705
Query: 479 GFYADQFWPKGRAIIPKLIHRWLSPQVLAYWYMYGGHRTSSGDILLKLKGSREGXXXXXX 538
GFYA+ +WPKG+ IPKLIHRWLSP LAYWYMY G +TSSGDI+L+LKGS EG
Sbjct: 706 GFYAEHYWPKGQPEIPKLIHRWLSPHSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVK 765
Query: 539 XXXXXSLSCRVKVKGRVFWIGFLGSDSIWFWKLVEPYIIDDLKDYLRVGDQMSDN-NAVE 597
S+ CRVK KG+VFWIG G++S FWKL+EP+++++LK++L+ + DN E
Sbjct: 766 ALQAKSMECRVKKKGKVFWIGLQGTNSALFWKLIEPHVLENLKEHLKPASESLDNVKEAE 825
Query: 598 TQHINF 603
Q INF
Sbjct: 826 EQSINF 831
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 160/332 (48%), Gaps = 18/332 (5%)
Query: 31 RELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNS 90
RELFD++ +G P+E TF ILV Y A G D+ + N M G P ++N+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKA---GLTDKGLELLNAMESF-GVLPNKVIYNT 222
Query: 91 LFRALVTKP-ADTSKRYLKQA--EFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARI 147
+ + + D S++ +++ E + ++VT I G + +D +RI
Sbjct: 223 IVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV--------LDASRI 274
Query: 148 ASLREEMKLAGIEEGRDVLLSI-LRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRME 206
S E + G+ + ++ L+ K G +E+A+ + + D Q++ ++
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQ 334
Query: 207 VFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKP 266
+ G+ +++ + ++M ++ S+ Y+ +++ LC+ + +++++ +G+ P
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394
Query: 267 LMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIF 325
++ L++ Y ++ D +S+ ++ C PN N+ L SL K+G + +AEE+
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 326 THICSGEGVGVTGRSCNIILSAYLSSGEHVKA 357
+ + +G G+ +CNII+ SGE KA
Sbjct: 455 RKM-NEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%)
Query: 220 IFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYL 279
+ EMKE+ S ++ Y+ I+ LC ++++ + +L+ E ++ + P + SF L+ +
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675
Query: 280 NLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
+ D + VF + C +Y++ + L+ G L KA E+ +
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAV 724
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 146/338 (43%), Gaps = 50/338 (14%)
Query: 22 GKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
G+ G ++ +F ++ G VP TF+ L+ AY G ++A ++Y RM+ G
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC---GSFEQAMTVYRRMLD-AGV 520
Query: 82 KPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDN 141
P LS +N++ AL +Q+E + + + + Y L LH+Y +
Sbjct: 521 TPDLSTYNTVLAALA------RGGMWEQSEKVLAEMEDGRCKPNELTYCSL--LHAYANG 572
Query: 142 IDRARIASLREEMKLAGIEEGRDVLL-SILRACSKDGDVEEAEATWLKLLRIDGGPPTQA 200
+ + SL EE+ +G+ E R VLL +++ CSK + EAE + +L P
Sbjct: 573 KEIGLMHSLAEEV-YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 201 FVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFI 260
+ ++ + K+ + MKER + S+ Y+ ++ + R+ + SE +++E +
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 261 ESGMKPLMPSFSELMNLYL-NLNLHD---------------------------KLESVFS 292
G+KP + S++ ++ Y N + D +S+F
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 293 ACL--------KKCRPNRTIYNMYLDSLVKVGNLDKAE 322
+ CRPN+ YN +D K+ D+A+
Sbjct: 752 EAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/389 (18%), Positives = 158/389 (40%), Gaps = 20/389 (5%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M+ + +D L D GK + + ++ ++++ G PS T++ L+ AY
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR--- 361
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
G LDEA + N+M + G KP + + +L ++ A IF + +G
Sbjct: 362 DGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGF------ERAGKVESAMSIFEEMRNAG 414
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
+ + I ++ + + + +E+ + G+ ++L ++G E
Sbjct: 415 CKPNICTFNAFIKMYGNRGKF--TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
+ ++ R P + F + +++ G +++ ++R M + + ++ Y+ ++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLN----LHDKLESVFSACLKK 297
L R + SE ++ E + KP ++ L++ Y N +H E V+S ++
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE- 591
Query: 298 CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKA 357
P + + K L +AE F+ + G + N ++S Y KA
Sbjct: 592 --PRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 358 ENVYNLMCQKKYDIEPSLMQKLDYVLSLS 386
V + M ++ + + L Y+ S S
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRS 677
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 12/274 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M++ R D + L + + KE K LFD++ +G +P++ F L+ +
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR--- 357
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
G +D Y +M+ G +P + L+N+L K D L A I ++ G
Sbjct: 358 NGEIDLMKESYQKMLS-KGLQPDIVLYNTLVNGFC-KNGD-----LVAARNIVDGMIRRG 410
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
L K Y LI +++ A +R+EM GIE R +++ K+G V +
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETA--LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
AE ++LR P + M+ F K G+ ++ +EM+ SV Y+ ++
Sbjct: 469 AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLN 528
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELM 275
LC+ +M ++ L+ + G+ P +++ L+
Sbjct: 529 GLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 138/313 (44%), Gaps = 25/313 (7%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L + KEG + +++FD+I + P+ +F+ L+ Y G LDE + ++M
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV---GNLDEGFRLKHQM- 301
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLH 136
+ +P + +++L AL + + A +F + GL I+ LI H
Sbjct: 302 EKSRTRPDVFTYSALINALC------KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGP 196
S ID + + ++M G++ + +++ K+GD+ A ++R P
Sbjct: 356 SRNGEIDLMKESY--QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 197 PTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLM 256
+ ++ F + G+ +LEI +EM + + G+ ++ +C+ + +E +
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 257 QEFIESGMKP-------LMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYL 309
+E + +G+KP +M +F + + L +++S P+ YN+ L
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV------PSVVTYNVLL 527
Query: 310 DSLVKVGNLDKAE 322
+ L K+G + A+
Sbjct: 528 NGLCKLGQMKNAD 540
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 192 IDGGPPTQAFVYR--MEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEM 249
+D G P +V+ M F K G + ++F E+ +R +V ++ +I C+ +
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 250 DLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFS-ACLKKCRPNRTIYNMY 308
D L + +S +P + ++S L+N N D +F C + PN I+
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 309 LDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQK 367
+ + G +D +E + + S +G+ N +++ + +G+ V A N+ + M ++
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLS-KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 155/364 (42%), Gaps = 22/364 (6%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
T L + + K K E+F ++ +G P ++ +L+ + G + +A SI++
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL---GNMQKASSIFDE 652
Query: 75 MIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIW 134
M++ G P + ++N L +++A+ + + GL Y +I
Sbjct: 653 MVE-EGLTPNVIIYNMLLGGFCRSGE------IEKAKELLDEMSVKGLHPNAVTYCTII- 704
Query: 135 LHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG 194
Y + D A L +EMKL G+ V +++ C + DVE A T +
Sbjct: 705 -DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGC 762
Query: 195 GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKE----RLGSVSVTGYHKIIEVLCRAQEMD 250
T F + K G+ E+ + + R G + Y+ +I+ LC+ ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 251 LSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFS-ACLKKCRPNRTIYNMYL 309
++ L + + + P + +++ L+N Y + ++ VF A P+ +Y++ +
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 310 DSLVKVGNLDKA----EEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMC 365
++ +K G KA +++F +G ++ +C +LS + GE AE V M
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Query: 366 QKKY 369
+ +Y
Sbjct: 943 RLQY 946
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 153/383 (39%), Gaps = 55/383 (14%)
Query: 21 MGKEGKFAKCRELFDDIINQGRVPSESTF--------------------------HILVI 54
M KEG K + LFD +I G +P + +I++
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 55 AYLSAPV------QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLK 108
Y V G LD A +I MI G +P + ++ +L K +L+
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTTLI-----------KTFLQ 464
Query: 109 QAEF-----IFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGR 163
+ F + + G+ Y LI S +D AR S EM G++
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR--SFLVEMVENGLKPNA 522
Query: 164 DVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRM-EVFAKVGEHMKSLEIFR 222
+ + + + A+ ++K +R G P + + + K G+ +++ +R
Sbjct: 523 FTYGAFISGYIEASEFASAD-KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 223 EMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLN 282
M ++ Y ++ L + ++D +E + +E G+ P + S+ L+N + L
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 283 LHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSC 341
K S+F +++ PN IYNM L + G ++KA+E+ + S +G+ +
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTY 700
Query: 342 NIILSAYLSSGEHVKAENVYNLM 364
I+ Y SG+ +A +++ M
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEM 723
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 130/309 (42%), Gaps = 26/309 (8%)
Query: 26 KFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQ---LGGYK 82
+FA + ++ G +P++ L+ Y +G + EACS Y M+ LG K
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCK---KGKVIEACSAYRSMVDQGILGDAK 593
Query: 83 PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNI 142
L N LF+ + AE IF + G+ YG LI S N+
Sbjct: 594 TYTVLMNGLFK----------NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNM 643
Query: 143 DRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG-GPPTQAF 201
+A +S+ +EM G+ + +L + G++E+A+ L + + G P +
Sbjct: 644 QKA--SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK-ELLDEMSVKGLHPNAVTY 700
Query: 202 VYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIE 261
++ + K G+ ++ +F EMK + Y +++ CR +++ + ++ +
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Query: 262 SGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKC-----RPNRTIYNMYLDSLVKVG 316
P F+ L+N + V + + +PN YN+ +D L K G
Sbjct: 761 GCASSTAP-FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 317 NLDKAEEIF 325
NL+ A+E+F
Sbjct: 820 NLEAAKELF 828
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 113/255 (44%), Gaps = 4/255 (1%)
Query: 105 RYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRD 164
+ L+ A+ + + + G+ + H Y LI N D A+ L EM GI
Sbjct: 291 KRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK--GLVHEMVSHGINIKPY 348
Query: 165 VLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREM 224
+ + SK+G +E+A+A + ++ P QA+ +E + + + E+ EM
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 225 KERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYL-NLNL 283
K+R +S Y +++ +C + ++D + ++++E I SG +P + ++ L+ +L N
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 284 HDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNI 343
D + + + P+ YN + L K +D+A + G+ +
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE-NGLKPNAFTYGA 527
Query: 344 ILSAYLSSGEHVKAE 358
+S Y+ + E A+
Sbjct: 528 FISGYIEASEFASAD 542
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 133/320 (41%), Gaps = 15/320 (4%)
Query: 8 RFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDE 67
R + + T L + +F + ++ QG P ++ L+I A +DE
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR---MDE 505
Query: 68 ACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPA-DTSKRYLKQAEFIFHNLVTSGLEIQK 126
A S M++ G KP + + + ++ +Y+K+ + G+ K
Sbjct: 506 ARSFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKE-------MRECGVLPNK 557
Query: 127 HIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATW 186
+ GLI + + + A S M GI ++ K+ V++AE +
Sbjct: 558 VLCTGLINEYCKKGKVIEA--CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 187 LKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRA 246
++ P ++ + F+K+G K+ IF EM E + +V Y+ ++ CR+
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 247 QEMDLSESLMQEFIESGMKPLMPSFSELMNLYL-NLNLHDKLESVFSACLKKCRPNRTIY 305
E++ ++ L+ E G+ P ++ +++ Y + +L + LK P+ +Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 306 NMYLDSLVKVGNLDKAEEIF 325
+D ++ ++++A IF
Sbjct: 736 TTLVDGCCRLNDVERAITIF 755
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 29/290 (10%)
Query: 45 SESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSK 104
S F I+ AY A + EAC +NRM++ G KP + + L +L K
Sbjct: 137 SSKVFWIVFRAYSRANLPS---EACRAFNRMVEFG-IKPCVDDLDQLLHSL------CDK 186
Query: 105 RYLKQAEFIFHNLVTSGLEIQKHIYGGLI--WLHSYQDNIDRARIASLREEMKLAGIEEG 162
+++ A+ F G+ Y L+ W R R AS ++ +E
Sbjct: 187 KHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA--------RIRDASGARKVFDEMLERN 238
Query: 163 RDVLL----SILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSL 218
V L ++L A K GDV+ + ++ + P +F + + G+ +
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAY 298
Query: 219 EIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLY 278
++ MK +V ++ II+ LC+ +++D + L+ E I+ G P +++ +M +
Sbjct: 299 KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYH 358
Query: 279 LN---LNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIF 325
+ +N KL S KC P+R YNM L L+++G D+A EI+
Sbjct: 359 CDHCEVNRATKLLSRMDR--TKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 160/367 (43%), Gaps = 14/367 (3%)
Query: 7 YRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLD 66
Y D + L + + EG+ ++ EL D ++ G P+ T + LV + G +
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC---LNGKVS 194
Query: 67 EACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQK 126
+A + +RM++ G ++P + + + + K T+ A + + +++
Sbjct: 195 DAVLLIDRMVETG-FQPNEVTYGPVLKVM-CKSGQTA-----LAMELLRKMEERKIKLDA 247
Query: 127 HIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATW 186
Y +I ++D A +L EM++ G + + +++R G ++
Sbjct: 248 VKYSIIIDGLCKDGSLDNA--FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 187 LKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRA 246
+++ P AF ++ F K G+ ++ E+ +EM +R S Y +I+ C+
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 247 QEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNL-HDKLESVFSACLKKCRPNRTIY 305
++D + ++ + G P + +F+ L+N Y NL D LE L+ + Y
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 306 NMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMC 365
N + ++G L+ A+E+F + S V S I+L +GE KA ++ +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVS-RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 366 QKKYDIE 372
+ K +++
Sbjct: 485 KSKMELD 491
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 169/403 (41%), Gaps = 49/403 (12%)
Query: 21 MGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGG 80
M K G+ A EL + + ++ ++ + ++I L G LD A +++N M ++ G
Sbjct: 222 MCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCK--DGSLDNAFNLFNEM-EIKG 277
Query: 81 YKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQD 140
+K + ++ +L R + R+ A+ + +++ + + LI +
Sbjct: 278 FKADIIIYTTLIRGFCY-----AGRWDDGAKLL-RDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 141 NIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQA 200
+ A L +EM GI S++ K+ +++A ++ GP +
Sbjct: 332 KLREAE--ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 201 FVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFI 260
F + + K LE+FR+M R Y+ +I+ C ++++++ L QE +
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 261 ESGMKPLMPSFSELMNLYLN-------LNLHDKLES-------------VFSAC------ 294
++P + S+ L++ + L + +K+E + C
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 295 ----------LKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNII 344
LK +P+ YN+ + L K G+L +A+ +F + +G G + NI+
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTYNIL 568
Query: 345 LSAYLSSGEHVKAENVYNLMCQKKYDIEPSLMQKLDYVLSLSR 387
+ A+L G+ K+ + + + + ++ S ++ + +LS R
Sbjct: 569 IRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 172/382 (45%), Gaps = 32/382 (8%)
Query: 9 FDFALSTKLAD---------YMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSA 59
FD + T LA+ ++ K+GK + EL + ++G P+ +++ +++ +
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR- 490
Query: 60 PVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVT 119
Q +D A +++ +++ G KP ++ L + + A + +++ +
Sbjct: 491 --QKNMDLARIVFSNILE-KGLKPNNYTYSILIDGCFRNHDE------QNALEVVNHMTS 541
Query: 120 SGLEIQKHIYGGLIWLHSYQDNIDRAR--IASLREEMKLAGIEEGRDVLLSILRACSKDG 177
S +E+ +Y +I +AR +A++ EE +L + SI+ K+G
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN---SIIDGFFKEG 598
Query: 178 DVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYH 237
+++ A A + ++ P + M K ++LE+ EMK + + + Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 238 KIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK 297
+I+ C+ M+ + +L E +E G+ P P ++ L++ + NL ++ LK
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 298 -CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSC--NIILSAYLSSGEH 354
R + Y +D L+K GNL A E++T + + VG+ +I++ G+
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEM---QAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 355 VKAENVYNLMCQKKYDIEPSLM 376
VK ++ M KK ++ P+++
Sbjct: 776 VKVVKMFEEM--KKNNVTPNVL 795
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 40/279 (14%)
Query: 126 KHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEAT 185
+ Y +I Q N+D A L++EM GI S++ K+ D+ A
Sbjct: 304 QETYTSVILASVKQGNMDDA--IRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 186 WLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLG-SVSVTGYHKIIEV-- 242
+ K+ + P + F +E F K GE K+LE +++M E LG + SV H II+
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM-EVLGLTPSVFHVHTIIQGWL 420
Query: 243 --------------------------------LCRAQEMDLSESLMQEFIESGMKPLMPS 270
LC+ + D + L+ + G+ P + S
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 271 FSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHIC 329
++ +M + D VFS L+K +PN Y++ +D + + A E+ H+
Sbjct: 481 YNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMT 540
Query: 330 SGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKK 368
S + V G I++ G+ KA + M ++K
Sbjct: 541 SS-NIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 168/386 (43%), Gaps = 41/386 (10%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
M ++H R ++ T + MG+ GK + LF+++I +G + ++ L+
Sbjct: 261 MKKRHCRRDEYTY-TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGK 319
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKP--------ADTSKRYLKQA-- 110
+ +D+A +++RM++ G +P ++ L LV + + SKRY+ Q
Sbjct: 320 M---VDKAIQVFSRMVETGC-RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIY 375
Query: 111 EFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGI----------- 159
++ L G + H +W S+ +R S+ E + AG
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMW--SFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 160 -EEG--RDVLL--SILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEV--FAKVG 212
E+G D ++ ++ A K + + K+ + GP F Y + + F +VG
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK--DGPSPDIFTYNILIASFGRVG 491
Query: 213 EHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFS 272
E +++ IF E++ + Y+ +I L + ++D + +E E G+ P + ++S
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 273 ELMNLYLNLNLHDKLESVFSACL-KKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSG 331
LM + + S+F L K C+PN YN+ LD L K G +A ++++ +
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM--- 608
Query: 332 EGVGVTGRSCNIILSAYLSSGEHVKA 357
+ G+T S + L S H K+
Sbjct: 609 KQQGLTPDSITYTVLERLQSVSHGKS 634
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 145/315 (46%), Gaps = 22/315 (6%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSI-YNRMIQLGGY 81
+ GKF+K +EL D + +G VP +F+ L+ A L + G L ++ M++ G
Sbjct: 237 RSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKS---GGLTPNLAVELLDMVRNSGL 293
Query: 82 KPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDN 141
+P +N+L A + L A +F ++ + Y +I ++
Sbjct: 294 RPDAITYNTLLSAC------SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG---- 343
Query: 142 IDRARIASLRE----EMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPP 197
R +A+ E E++L G S+L A +++ + E+ + + ++ ++ G
Sbjct: 344 --RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 198 TQAFVYRMEVFAKVGEHMKSLEIFREMKERLG-SVSVTGYHKIIEVLCRAQEMDLSESLM 256
+ + ++ K G+ +L+++++MK G + Y +I+ L +A + +LM
Sbjct: 402 EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALM 461
Query: 257 QEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKV 315
E ++ G+KP + ++S L+ Y ++ E FS L+ +P+ Y++ LD L++
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 316 GNLDKAEEIFTHICS 330
KA ++ + S
Sbjct: 522 NETRKAWGLYRDMIS 536
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 156/356 (43%), Gaps = 17/356 (4%)
Query: 9 FDFALS---TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCL 65
F FA S T + + GK+ + K + ++ GR P T++ L+ AY GC
Sbjct: 747 FHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC---GCY 803
Query: 66 DEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQ 125
+ A +I+N M++ G P + N L AL L++ + L G +I
Sbjct: 804 ERARAIFNTMMR-DGPSPTVESINILLHALCVDG------RLEELYVVVEELQDMGFKIS 856
Query: 126 KHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEAT 185
K L+ L ++ + + + MK AG + ++ K V +AE
Sbjct: 857 KSSI--LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIM 914
Query: 186 WLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCR 245
++ + + ++++ + ++ K++++++ +KE T Y+ +I + CR
Sbjct: 915 VSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Query: 246 AQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTI 304
+ + LMQ+ G+ P + ++ L++ + ++ E +F L K + +R+
Sbjct: 975 DRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSF 1034
Query: 305 YNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENV 360
Y+ + G+ KAE++ + G+ T + ++++ +Y SSG +AE V
Sbjct: 1035 YHTMMKISRDSGSDSKAEKLL-QMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKV 1089
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%), Gaps = 16/227 (7%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLS--A 59
M++ ++ + A+ + + K +++ I G P E+T++ L+I Y
Sbjct: 918 MEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR 977
Query: 60 PVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVT 119
P +G L + +M LG P+L + SL A ++ L+QAE +F L++
Sbjct: 978 PEEGYL-----LMQQMRNLG-LDPKLDTYKSLISAF------GKQKCLEQAEQLFEELLS 1025
Query: 120 SGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDV 179
GL++ + Y ++ + +D+ ++ L + MK AGIE + ++ + S G+
Sbjct: 1026 KGLKLDRSFYHTMMKIS--RDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 180 EEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKE 226
+EAE L + T + ++ + + ++ +E EMK+
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKK 1130
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 142/319 (44%), Gaps = 16/319 (5%)
Query: 8 RFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDE 67
R +F L K + G+ G + RE F+ + +G P+ + L+ AY V +DE
Sbjct: 309 RTEFGLMVK---FYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY---AVGRDMDE 362
Query: 68 ACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKH 127
A S +M + G + SL V + + + A++ F +
Sbjct: 363 ALSCVRKMKEEG-------IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNAS 415
Query: 128 IYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWL 187
IYG +I+ H N++RA +L EM+ GI+ + +++ + D ++ +
Sbjct: 416 IYGKIIYAHCQTCNMERAE--ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFK 473
Query: 188 KLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQ 247
+L P + + ++ KVG+ K+LE+ R MKE ++ Y +I + +
Sbjct: 474 RLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 248 EMDLSESLMQEFIESGMKPLMPSFSELMNLYLNL-NLHDKLESVFSACLKKCRPNRTIYN 306
+ + ++ ++ ++ GMKP + ++ +++ + + N+ +++V + RP +
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFM 593
Query: 307 MYLDSLVKVGNLDKAEEIF 325
+ K G++ ++ E+F
Sbjct: 594 PIIHGYAKSGDMRRSLEVF 612
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 129/314 (41%), Gaps = 13/314 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M+ ++ D L D ++ + ++ G VP TF ILV A A
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA-- 376
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
G EA + M + G P L +N+L L+ L A +F N+ + G
Sbjct: 377 -GNFGEAFDTLDVM-RDQGILPNLHTYNTLICGLL------RVHRLDDALELFGNMESLG 428
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
++ + Y ++++ Y + D E+MK GI + L + +K G E
Sbjct: 429 VKPTAYTY--IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
A+ + L I P + + M+ ++KVGE +++++ EM E V + +I
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELM-NLYLNLNLHDKLESVFSACLKKCRP 300
L +A +D + + E +KP + +++ L+ L N + + +E K C P
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 301 NRTIYNMYLDSLVK 314
N +N D L K
Sbjct: 607 NTITFNTLFDCLCK 620
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 155/379 (40%), Gaps = 20/379 (5%)
Query: 14 STKLADYMGK----EGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEAC 69
+T+ +YM + +GK + +FD + Q R+ T L I + S V+G L +A
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFD--LMQKRIIKRDTNTYLTI-FKSLSVKGGLKQAP 173
Query: 70 SIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIY 129
+M + G S +N L L+ R+ +A ++ ++ G Y
Sbjct: 174 YALRKMREFGFVLNAYS-YNGLIHLLL------KSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 130 GGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKL 189
L+ + +ID + L +EM+ G++ +R + G + EA ++
Sbjct: 227 SSLMVGLGKRRDIDS--VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 190 LRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEM 249
GP + ++ + + E+F +MK Y +++ +++
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 250 DLSESLMQEFIESGMKPLMPSFSELMNLYLNL-NLHDKLESVFSACLKKCRPNRTIYNMY 308
D + E + G P + +F+ L++ N + +++ + PN YN
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 309 LDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKK 368
+ L++V LD A E+F ++ S GV T + + + Y SG+ V A + M K
Sbjct: 405 ICGLLRVHRLDDALELFGNMES-LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM--KT 461
Query: 369 YDIEPSLMQKLDYVLSLSR 387
I P+++ + SL++
Sbjct: 462 KGIAPNIVACNASLYSLAK 480
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 141/336 (41%), Gaps = 20/336 (5%)
Query: 26 KFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRL 85
K A+ E F ++I QG +P + L+ + +G + A + M + +
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK---RGDIRAASKFFYEM-----HSRDI 825
Query: 86 SLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRA 145
+ + A+++ + +A +FH + GLE + LI + ++ A
Sbjct: 826 TPDVLTYTAIISGFCQIGD--MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 883
Query: 146 RIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRM 205
+ M AG +++ K+GD++ A ++ +I P + +
Sbjct: 884 --FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 206 EVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMK 265
K G +++++ E + + Y +++ C++ EMD ++ +++E + G++
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 266 PLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEI 324
P + +F+ LMN + + + E + + L K PN T +N + NL A I
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061
Query: 325 FTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENV 360
+ +CS GVG G++ ++ H KA N+
Sbjct: 1062 YKDMCS-RGVGPDGKTYENLVKG------HCKARNM 1090
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 146 RIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRM 205
++ L E MK G++ + SI+ + + EAE + +++R P T + +
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 206 EVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMK 265
+ F K G+ + + F EM R + V Y II C+ +M + L E G++
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 861
Query: 266 PLMPSFSELMNLYLNL-NLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEE- 323
P +F+EL+N Y ++ D C PN Y +D L K G+LD A E
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 324 ------------IFTH--ICSG--------EGVGVTGR-----------SCNIILSAYLS 350
IFT+ I +G E V + G + ++ AY
Sbjct: 922 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981
Query: 351 SGEHVKAENVYNLMCQKKYDIEPSLM 376
SGE KA+ + M K ++P+++
Sbjct: 982 SGEMDKAQEILKEMLGK--GLQPTIV 1005
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 141/336 (41%), Gaps = 20/336 (5%)
Query: 26 KFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRL 85
K A+ E F ++I QG +P + L+ + +G + A + M + +
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK---RGDIRAASKFFYEM-----HSRDI 825
Query: 86 SLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRA 145
+ + A+++ + +A +FH + GLE + LI + ++ A
Sbjct: 826 TPDVLTYTAIISGFCQIGD--MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 883
Query: 146 RIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRM 205
+ M AG +++ K+GD++ A ++ +I P + +
Sbjct: 884 --FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 206 EVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMK 265
K G +++++ E + + Y +++ C++ EMD ++ +++E + G++
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 1001
Query: 266 PLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEI 324
P + +F+ LMN + + + E + + L K PN T +N + NL A I
Sbjct: 1002 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 1061
Query: 325 FTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENV 360
+ +CS GVG G++ ++ H KA N+
Sbjct: 1062 YKDMCS-RGVGPDGKTYENLVKG------HCKARNM 1090
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 146 RIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRM 205
++ L E MK G++ + SI+ + + EAE + +++R P T + +
Sbjct: 742 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 206 EVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMK 265
+ F K G+ + + F EM R + V Y II C+ +M + L E G++
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 861
Query: 266 PLMPSFSELMNLYLNL-NLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEE- 323
P +F+EL+N Y ++ D C PN Y +D L K G+LD A E
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 324 ------------IFTH--ICSG--------EGVGVTGR-----------SCNIILSAYLS 350
IFT+ I +G E V + G + ++ AY
Sbjct: 922 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 981
Query: 351 SGEHVKAENVYNLMCQKKYDIEPSLM 376
SGE KA+ + M K ++P+++
Sbjct: 982 SGEMDKAQEILKEMLGK--GLQPTIV 1005
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 155/361 (42%), Gaps = 21/361 (5%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK 82
K G K +L ++ +G P T++ L+ Y + EA S+ +RM + G
Sbjct: 215 KSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF---EALSVQDRM-ERSGVA 270
Query: 83 PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNI 142
P + +NS + + +++A +F + + Y LI + ++I
Sbjct: 271 PNIVTYNSFIHGF------SREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 143 DRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFV 202
D A LRE M+ G G SILR +DG + EA ++ P
Sbjct: 324 DEA--LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCN 381
Query: 203 YRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIES 262
+ + K+ + + ++++ ++M E + + Y +I C+ E++ ++ + IE
Sbjct: 382 TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK 441
Query: 263 GMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK--CRPNRTIYNMYLDSLVKVGNLDK 320
G P ++S L++ + N N D++ + K+ C + +Y + + K+ +D
Sbjct: 442 GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC-ADVALYRGLIRRICKLEQVDY 500
Query: 321 AEEIFTHICSGEGVGVTGRSC--NIILSAYLSSGEHVKAENVYNLMCQKKYDIEPSLMQK 378
A+ +F S E G+ G S + AY +G+ +A ++++M ++ + L +
Sbjct: 501 AKVLFE---SMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKS 557
Query: 379 L 379
+
Sbjct: 558 I 558
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 17/271 (6%)
Query: 113 IFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRA 172
+F + + GL + H+ + L+S + + ++M G+ V ++ A
Sbjct: 155 VFEQIRSCGL--KPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHA 212
Query: 173 CSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVS 232
CSK GD E+AE ++ P + + V+ K H ++L + M+ + +
Sbjct: 213 CSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPN 272
Query: 233 VTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHD---KLES 289
+ Y+ I R M + L +E I+ + +++ L++ Y +N D +L
Sbjct: 273 IVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLRE 331
Query: 290 VFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYL 349
V + + P YN L L + G + +A + T + SG+ + +CN +++AY
Sbjct: 332 VMES--RGFSPGVVTYNSILRKLCEDGRIREANRLLTEM-SGKKIEPDNITCNTLINAYC 388
Query: 350 SSGEHVKAENVYNLMCQKKYDIEPSLMQKLD 380
+ V A V KK IE L KLD
Sbjct: 389 KIEDMVSAVKV------KKKMIESGL--KLD 411
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 32/318 (10%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
+ L D KEG + + + D+ G VP+E T+ L+ A G L +A + N
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI---GNLSDAFRLGNE 295
Query: 75 MIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIW 134
M+Q+G + + + AL+ D + +K+AE +F + T+G+ Y LI
Sbjct: 296 MLQVG-----VEWNVVTYTALIDGLCDAER--MKEAEELFGKMDTAGVIPNLASYNALIH 348
Query: 135 LHSYQDNIDRARIASLREEMKLAGIEEGRDVLLS---ILRACSKDGDVEEAEATWLKLLR 191
N+DRA L E+K GI+ D+LL I CS +E+ EA + +
Sbjct: 349 GFVKAKNMDRA--LELLNELKGRGIKP--DLLLYGTFIWGLCS----LEKIEAAKVVMNE 400
Query: 192 I-DGGPPTQAFVYR--MEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCR--- 245
+ + G + +Y M+ + K G + L + EMKE V+V + +I+ LC+
Sbjct: 401 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 460
Query: 246 -AQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRT 303
++ +D + +F G++ F+ +++ N + ++F ++K P+RT
Sbjct: 461 VSKAVDYFNRISNDF---GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 517
Query: 304 IYNMYLDSLVKVGNLDKA 321
Y +D K GN+ +A
Sbjct: 518 AYTSLMDGNFKQGNVLEA 535
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 136/342 (39%), Gaps = 16/342 (4%)
Query: 63 GCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGL 122
G L+EA +++M + + S + L R D KR+ F +++ +G
Sbjct: 74 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF-------FKDMIGAGA 126
Query: 123 EIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEA 182
Y +I + +++ AR L EEMK G+ S++ K G +++
Sbjct: 127 RPTVFTYNIMIDCMCKEGDVEAAR--GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 184
Query: 183 EATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEV 242
+ ++ + P + + F K G+ LE +REMK +V Y +++
Sbjct: 185 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244
Query: 243 LCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNL-NLHDKLESVFSACLKKCRPN 301
C+ M + + G+ P +++ L++ + NL D N
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304
Query: 302 RTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVY 361
Y +D L + +AEE+F + + GV S N ++ ++ + +A +
Sbjct: 305 VVTYTALIDGLCDAERMKEAEELFGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELL 363
Query: 362 NLMCQKKYDIEPSLMQKLDYV---LSLSRKEVKKPVSLKMSK 400
N + K I+P L+ ++ SL + E K V +M +
Sbjct: 364 NEL--KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 403
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 157/367 (42%), Gaps = 38/367 (10%)
Query: 22 GKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
K GK + F D+I G P+ T++I++ +G ++ A ++ M + G
Sbjct: 106 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK---EGDVEAARGLFEEM-KFRGL 161
Query: 82 KPRLSLHNSLFRAL--VTKPADTS------KRYLKQAEFIFHNLVTSGLEIQKHIYGGL- 132
P +NS+ V + DT K + + I +N + + +G L
Sbjct: 162 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF----CKFGKLP 217
Query: 133 IWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRI 192
I L Y+ EMK G++ +++ A K+G +++A ++ + R+
Sbjct: 218 IGLEFYR-------------EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 264
Query: 193 DGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLS 252
P + ++ K+G + + EM + +V Y +I+ LC A+ M +
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324
Query: 253 ESLMQEFIESGMKPLMPSFSELMNLYLNL-NLHDKLESVFSACLKKCRPNRTIYNMYLDS 311
E L + +G+ P + S++ L++ ++ N+ LE + + +P+ +Y ++
Sbjct: 325 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 384
Query: 312 LVKVGNLDKAEEIFTHICSGEGVGVTGRSC--NIILSAYLSSGEHVKAENVYNLMCQKKY 369
L + ++ A+ + + + G+ S ++ AY SG + ++ + M K+
Sbjct: 385 LCSLEKIEAAKVVMNEM---KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM--KEL 439
Query: 370 DIEPSLM 376
DIE +++
Sbjct: 440 DIEVTVV 446
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 143/351 (40%), Gaps = 21/351 (5%)
Query: 19 DYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQL 78
D + +E K + F ++ +GR P ++ IL+ A G + +A I+N MI+
Sbjct: 122 DLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRA---GKVTDAVEIWNAMIRS 178
Query: 79 GGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSY 138
G +S N ALV K L E + + ++ +++ +Y LI
Sbjct: 179 G-----VSPDNKACAALVVGLCHARKVDLAY-EMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 139 QDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPT 198
I++A +L+ M G E +L + ++ AE +++R G
Sbjct: 233 AGRIEKAE--ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR--SGIQL 288
Query: 199 QAFVYR--MEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLM 256
A+ Y ++ +V K + E G V Y +IE CRA + L
Sbjct: 289 DAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLF 348
Query: 257 QEFIESGMKPLMPSFSELMNLYL---NLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLV 313
+E + GM + +++ L+ +L N ++ KL + P+R Y LD L
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL--GLSPDRIFYTTILDHLC 406
Query: 314 KVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLM 364
K GN+DKA +F + E + S N ++S SG +A ++ M
Sbjct: 407 KSGNVDKAYGVFNDMIEHE-ITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 129/325 (39%), Gaps = 12/325 (3%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M Q D T L + + + GK E+++ +I G P LV+
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL----- 194
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
C + M+ R+ L ++ AL++ + +++AE + + G
Sbjct: 195 --CHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGR--IEKAEALKSYMSKIG 250
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
E Y + L+ Y DN R + EM +GI+ +L+ + ++
Sbjct: 251 CEPDLVTYN--VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
+K + G ++ +E F + K+ +F EM+++ ++V Y +I+
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRP 300
R +++ L+ + E G+ P ++ +++ DK VF+ ++ + P
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 301 NRTIYNMYLDSLVKVGNLDKAEEIF 325
+ YN + L + G + +A ++F
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLF 453
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 146/336 (43%), Gaps = 14/336 (4%)
Query: 37 IINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALV 96
++ G P +TF+ L+ ++G + EA + +RM++ G +P + +NS+ +
Sbjct: 139 VMKLGYEPDTTTFNTLIKGLF---LEGKVSEAVVLVDRMVE-NGCQPDVVTYNSIVNG-I 193
Query: 97 TKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKL 156
+ DTS A + + ++ Y +I ID A SL +EM+
Sbjct: 194 CRSGDTS-----LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA--ISLFKEMET 246
Query: 157 AGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMK 216
GI+ S++R K G + ++ + P F ++VF K G+ +
Sbjct: 247 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 306
Query: 217 SLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMN 276
+ E+++EM R S ++ Y+ +++ C + + +++ + + P + +F+ L+
Sbjct: 307 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 366
Query: 277 LYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVG 335
Y + D VF K+ N Y++ + + G + AEE+F + S GV
Sbjct: 367 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS-HGVL 425
Query: 336 VTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDI 371
+ I+L +G+ KA ++ + + K D+
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 17/307 (5%)
Query: 66 DEACSIYNRMIQLGGYKPRLSLHNSLFRALV-TKPADTSKRYLKQAEF--IFHNLVTSGL 122
D+A +++ MI+ P L + F A+ TK + + KQ E I HN
Sbjct: 60 DDAIALFQEMIR-SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN------ 112
Query: 123 EIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEA 182
IY I ++ + S+ ++ G E ++++ +G V EA
Sbjct: 113 -----IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167
Query: 183 EATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEV 242
+++ P + + + G+ +L++ R+M+ER V Y II+
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227
Query: 243 LCRAQEMDLSESLMQEFIESGMKPLMPSFSELM-NLYLNLNLHDKLESVFSACLKKCRPN 301
LCR +D + SL +E G+K + +++ L+ L +D + ++ PN
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287
Query: 302 RTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVY 361
+N+ LD VK G L +A E++ + + G+ + N ++ Y +A N+
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPNIITYNTLMDGYCMQNRLSEANNML 346
Query: 362 NLMCQKK 368
+LM + K
Sbjct: 347 DLMVRNK 353
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 140/314 (44%), Gaps = 12/314 (3%)
Query: 13 LSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIY 72
L++ + +G+ GK + +F+ G + F L+ AY + G +EA S++
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRS---GLHEEAISVF 291
Query: 73 NRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGL 132
N M + G +P L +N++ A KQ F + +G++ + + L
Sbjct: 292 NSMKEYG-LRPNLVTYNAVIDA-----CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 133 IWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRI 192
+ + S + AR +L +EM IE+ ++L A K G ++ A ++
Sbjct: 346 LAVCSRGGLWEAAR--NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 193 DGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLS 252
P ++ ++ FAK G ++L +F EM+ ++ Y+ ++ + + + +
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 253 ESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDS 311
+++E G+K + +++ L+ Y +D+++ VF+ ++ PN Y+ +D
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 312 LVKVGNLDKAEEIF 325
K G +A EIF
Sbjct: 524 YSKGGLYKEAMEIF 537
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 131/313 (41%), Gaps = 25/313 (7%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
T L D K GK + + +++ G P+ F+ L+ A+ + + EA I+
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK---EHRIPEAVEIFRE 484
Query: 75 MIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIW 134
M + G KP + NSL L +K A ++ ++++ G+ Y LI
Sbjct: 485 MPR-KGCKPDVYTFNSLISGLCEVDE------IKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 135 LHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG 194
+ I AR L EM G S+++ + G+V++A + + K+LR
Sbjct: 538 AFLRRGEIKEAR--KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 195 GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSES 254
P + + + G +++E +EM R + + ++ +I LCRA ++ +
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 255 LMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACL-------KKCRPNRTIYNM 307
+ ++ G+ P +F+ LM+ K V+ ACL PN +++
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLC------KGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 308 YLDSLVKVGNLDK 320
L S++ LD+
Sbjct: 710 LLQSIIPQETLDR 722
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 155/384 (40%), Gaps = 46/384 (11%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M +H + + L + K + + +L +++ G VP TF+ +++
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 62 QGCLDEACSIYNRMIQLG--------GY----------------------KPRLSLHNSL 91
++EA + NRM+ G GY KP + + N+L
Sbjct: 303 ---INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 92 FRALVTKPADTSKRYLKQAEFIFHNLVTS-GLEIQKHIYGGLIWLHSYQDNIDRARIASL 150
VT L A+ + ++VTS G+ Y LI+ + + + A +
Sbjct: 360 IHGFVTHGR------LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA--LEV 411
Query: 151 REEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG-GPPTQAFVYRMEVFA 209
+M+ G + ++ K G ++EA L + DG P T F + F
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV-LNEMSADGLKPNTVGFNCLISAFC 470
Query: 210 KVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMP 269
K +++EIFREM + V ++ +I LC E+ + L+++ I G+
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 270 SFSELMNLYLNLNLHDKLESVFSACLKKCRP-NRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
+++ L+N +L + + + + + P + YN + L + G +DKA +F +
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 329 CSGEGVGVTGRSCNIILSAYLSSG 352
+G + SCNI+++ SG
Sbjct: 591 LR-DGHAPSNISCNILINGLCRSG 613
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 153/396 (38%), Gaps = 41/396 (10%)
Query: 3 QQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQ 62
Q+ YR F + L +G G+F L + ++G V ES F ++ Y A
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 63 GCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPA---------DTSKRYLKQAEFI 113
G + + M + +P +N + LV+ D R + F
Sbjct: 163 G---QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 114 FH---------NLVTSGL----EIQKH-------IYGGLIWLHSYQDNIDRARIASLREE 153
F N + S L ++ KH IY LI S + ++ A L EE
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA--LQLLEE 277
Query: 154 MKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGE 213
M L G + ++ K + EA ++L P + Y M K+G
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 214 HMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIES-GMKPLMPSFS 272
+ ++F R+ + ++ +I +D +++++ + + S G+ P + +++
Sbjct: 338 VDAAKDLFY----RIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 273 ELMNLYLNLNLHD-KLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSG 331
L+ Y L LE + K C+PN Y + +D K+G +D+A + + S
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-SA 452
Query: 332 EGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQK 367
+G+ N ++SA+ +A ++ M +K
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 119/261 (45%), Gaps = 16/261 (6%)
Query: 8 RFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDE 67
R D K+ +G+ K R + D+ +G E F +L+ +Y A G + E
Sbjct: 147 RHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKA---GIVQE 203
Query: 68 ACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKH 127
+ I+ +M LG + + +NSLF+ ++ + RY+ A+ F+ +V+ G+E +H
Sbjct: 204 SVKIFQKMKDLGVERT-IKSYNSLFKVILRR-----GRYM-MAKRYFNKMVSEGVEPTRH 256
Query: 128 IYGGLIWLHSYQDNIDRARIASLR--EEMKLAGIEEGRDVLLSILRACSKDGDVEEAEAT 185
Y ++W ++ A LR E+MK GI +++ + ++EAE
Sbjct: 257 TYNLMLWGFFLSLRLETA----LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 186 WLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCR 245
++++ GP ++ ++ + V L IF EM+ + T Y ++ LC
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Query: 246 AQEMDLSESLMQEFIESGMKP 266
A +M ++++++ + + P
Sbjct: 373 AGKMVEAKNILKNMMAKHIAP 393
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/368 (18%), Positives = 149/368 (40%), Gaps = 26/368 (7%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK 82
+ G++ + F+ ++++G P+ T+++++ + + L+ A + M + G
Sbjct: 232 RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFF---LSLRLETALRFFEDM-KTRGIS 287
Query: 83 PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNI 142
P + N++ + + +AE +F + + + Y +I + D +
Sbjct: 288 PDDATFNTMINGFC------RFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 143 DRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFV 202
D + EEM+ +GIE ++L G + EA+ ++ P +
Sbjct: 342 DDG--LRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 203 YRMEVF-AKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIE 261
++ V +K G+ + E+ + M Y +IE C+A + + L+ IE
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIE 459
Query: 262 SG----------MKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDS 311
M+P +++ ++ N K E +F +K+ ++ N +
Sbjct: 460 KEIILRHQDTLEMEP--SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRG 517
Query: 312 LVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDI 371
K GN D + EI I S GV + +++ +Y+S GE A+ + M + +
Sbjct: 518 HAKEGNPDSSYEIL-KIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP 576
Query: 372 EPSLMQKL 379
+ SL + +
Sbjct: 577 DSSLFRSV 584
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 201 FVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFI 260
FV +E + K G +S++IF++MK+ ++ Y+ + +V+ R +++ + +
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 261 ESGMKPLMPSFSELM-NLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLD 319
G++P +++ ++ +L+L L L + P+ +N ++ + +D
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 320 KAEEIFTHICSGEGVGVTGRSCNIILSAYLS 350
+AE++F + G +G + S ++ YL+
Sbjct: 308 EAEKLFVEM-KGNKIGPSVVSYTTMIKGYLA 337
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 141/360 (39%), Gaps = 37/360 (10%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
M+Q+ Y D T L + ++ +L D++ ++G P T+++LV
Sbjct: 230 MLQRDCYP-DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK-- 286
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKP---------ADTSKRYLKQAE 111
+G LDEA N M G +P + HN + R++ + AD ++ +
Sbjct: 287 -EGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 112 FIFHNLVT--------------------SGLEIQKHIYGGLIWLHSYQDNIDRARIASLR 151
F+ L+ G + Y L+ + +DRA
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA--IEYL 402
Query: 152 EEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKV 211
E M G ++L A KDG VE+A +L P + ++ AK
Sbjct: 403 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 462
Query: 212 GEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSF 271
G+ K++++ EM+ + Y ++ L R ++D + EF G++P +F
Sbjct: 463 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Query: 272 SELM-NLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICS 330
+ +M L + ++ + + C+PN T Y + ++ L G +A E+ +C+
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 164/373 (43%), Gaps = 24/373 (6%)
Query: 3 QQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPS----ESTFHILVIAYLS 58
QQ + + A + L D + + KF D I++Q + + ES F L+ +
Sbjct: 81 QQKGFNHNNATYSVLLDNLVRHKKFLA----VDAILHQMKYETCRFQESLFLNLMRHFSR 136
Query: 59 APVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALV-TKPADTSKRYLKQAEFIFHNL 117
+ + D+ ++N + + KP L+ ++ L+ + + S++ L A+ HNL
Sbjct: 137 SDLH---DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAK---HNL 190
Query: 118 VTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACS-KD 176
GL+ I+ L+ H +I+ A + EEMK +GI + S L C
Sbjct: 191 ---GLQPNTCIFNILVKHHCKNGDINFAFLVV--EEMKRSGISYPNSITYSTLMDCLFAH 245
Query: 177 GDVEEAEATWLKLLRIDG-GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTG 235
+EA + ++ +G P F + F + GE ++ +I MK+ + +V
Sbjct: 246 SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 236 YHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYL-NLNLHDKLESVFSAC 294
Y ++ C+ ++ ++ E ++G+K ++ LMN + N + ++ +
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 295 LKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEH 354
+CR + YN+ L L G ++A ++ S EGV + S IIL+A +GE
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGS-EGVHLNKGSYRIILNALCCNGEL 424
Query: 355 VKAENVYNLMCQK 367
KA ++M ++
Sbjct: 425 EKAVKFLSVMSER 437
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 143/335 (42%), Gaps = 17/335 (5%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L D + K+G + +L D++ +G VP+E T++ L+ ++G LD+A S+ RM+
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC---LKGKLDKAVSLLERMV 319
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLH 136
P + +L LV +R A + ++ G + +HIY LI
Sbjct: 320 S-SKCIPNDVTYGTLINGLV------KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGP 196
+ + A SL +M G + V ++ ++G EA+ +++ P
Sbjct: 373 FKEGKAEEA--MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 197 PTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLM 256
+ M+ F K G +++++++EM + S + Y +I+ LC + + +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490
Query: 257 QEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACL----KKCRPNRTIYNMYLDSL 312
+ + G+KP ++S ++ + D ++ L K +P+ YN+ LD L
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550
Query: 313 VKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSA 347
++ +A ++ + G +CN L+
Sbjct: 551 CMQKDISRAVDLLNSMLD-RGCDPDVITCNTFLNT 584
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 145/363 (39%), Gaps = 52/363 (14%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L D + KE + + L D++ ++G PS +++L+ +G L + + M
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK---KGDLTRVTKLVDNMF 284
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLI-WL 135
L G P +N+L L K L +A + +V+S YG LI L
Sbjct: 285 -LKGCVPNEVTYNTLIHGLCLKGK------LDKAVSLLERMVSSKCIPNDVTYGTLINGL 337
Query: 136 HSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGG 195
+ D R+ S EE G + + ++ K+G EEA + W
Sbjct: 338 VKQRRATDAVRLLSSMEE---RGYHLNQHIYSVLISGLFKEGKAEEAMSLW--------- 385
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESL 255
R+M E+ ++ Y +++ LCR + + ++ +
Sbjct: 386 --------------------------RKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 256 MQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVK 314
+ I SG P ++S LM + L ++ V+ K C N+ Y++ +D L
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 315 VGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYN-LMCQKKYDIEP 373
VG + +A +++ + + G+ + + I+ G A +Y+ ++CQ++ +P
Sbjct: 480 VGRVKEAMMVWSKMLT-IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 374 SLM 376
++
Sbjct: 539 DVV 541
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 147/343 (42%), Gaps = 48/343 (13%)
Query: 22 GKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
G +G +F ++ + G P TF+ L+ AY G +A +Y M + G+
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC---GSEVDASKMYGEMTR-AGF 522
Query: 82 KPRLSLHNSLFRALVTKP---------ADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGG- 131
++ +N+L AL K +D + K E + L +Q + GG
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE------TSYSLMLQCYAKGGN 576
Query: 132 LIWLHSYQDNIDRARIAS----LREEM-------KLAGIEEG----------RDVLL--S 168
+ + ++ I +I LR + LAG E D+++ S
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 169 ILRACSKDGDVEEAEATWLKLLRIDG-GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKER 227
+L +++ ++AE L+ +R DG P + M+++ + GE K+ EI + +++
Sbjct: 637 MLSIFTRNNMYDQAEGI-LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 228 LGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKL 287
+ Y+ +I+ CR M + ++ E E G++P + +++ ++ Y + + ++
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 288 ESVFSACLKK--CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
E V C+ K CRPN + M +D + G +A + + I
Sbjct: 756 EDVIE-CMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 146 RIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRM 205
+I + +EM+ G++ ++L AC+++G + EA+ + +L P T + +
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 206 EVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMK 265
+VF K G + ++L + +EM+E Y++++ RA + +++ + G+
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Query: 266 PLMPSFSELMNLYLNLNLHDK-LESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEI 324
P +++ +++ Y D+ L+ +S C PN YN L L G ++ E+
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL---GKKSRSNEM 440
Query: 325 FTHICSGEGVGVT 337
+C + G +
Sbjct: 441 IKMLCDMKSNGCS 453
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 149/374 (39%), Gaps = 44/374 (11%)
Query: 7 YRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLD 66
Y D + L + EG+ ++ L D ++ + P T L+ ++G +
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC---LKGRVS 192
Query: 67 EACSIYNRMIQLG------GYKPRL---------SLHNSLFRALVTKPADTSKRYLKQAE 111
EA + +RM++ G Y P L +L LFR + + S + Q
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS---VVQYS 249
Query: 112 FIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILR 171
+ +L G S+ D + SL EM++ GI+ S++
Sbjct: 250 IVIDSLCKDG---------------SFDDAL------SLFNEMEMKGIKADVVTYSSLIG 288
Query: 172 ACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSV 231
DG ++ +++ + P F ++VF K G+ +++ E++ EM R +
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 232 SVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVF 291
Y+ +I+ C+ + + + + G +P + ++S L+N Y D +F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 292 SACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLS 350
K PN YN + + G L+ A+E+F + S GV + + I+L
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCD 467
Query: 351 SGEHVKAENVYNLM 364
+GE KA ++ M
Sbjct: 468 NGELNKALEIFEKM 481
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 118/274 (43%), Gaps = 12/274 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M+ + D + L + +GK+ ++ ++I + +P TF L+ ++
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK--- 327
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+G L EA +YN MI G P +NSL + L +A +F +V+ G
Sbjct: 328 EGKLLEAKELYNEMIT-RGIAPDTITYNSLIDGF------CKENCLHEANQMFDLMVSKG 380
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
E Y LI + +D L E+ G+ +++ + G +
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDG--MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
A+ + +++ P + ++ GE K+LEIF +M++ ++ + Y+ II
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELM 275
+C A ++D + SL + G+KP + +++ ++
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 4/201 (1%)
Query: 177 GDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGY 236
G V EA +++ P + + K G +L++FR+M+ER SV Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 237 HKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACL- 295
+I+ LC+ D + SL E G+K + ++S L+ N D + +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 296 KKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHV 355
+ P+ ++ +D VK G L +A+E++ + + G+ + N ++ +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT-RGIAPDTITYNSLIDGFCKENCLH 367
Query: 356 KAENVYNLMCQKKYDIEPSLM 376
+A +++LM K EP ++
Sbjct: 368 EANQMFDLMVSKG--CEPDIV 386
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 15/263 (5%)
Query: 108 KQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEM-KLAGIEEGRDVL 166
+ A ++F + SG +Y LI H + + +A + +R + K+ GIE + +
Sbjct: 150 RMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKA-LEKVRGYLDKMKGIERCQPNV 208
Query: 167 LS---ILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFRE 223
++ +LRA ++ G V++ A + L P F M+ + K G + +
Sbjct: 209 VTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTR 268
Query: 224 MKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNL 283
M+ + ++ +I+ + QE + E + + S KP +P+F+ ++ Y +
Sbjct: 269 MRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARM 328
Query: 284 HDKLESVFSACLKKCR-----PNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTG 338
DK E VF KK P+ Y + G++ +A EIF + + V +
Sbjct: 329 IDKAEWVF----KKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRV-LKA 383
Query: 339 RSCNIILSAYLSSGEHVKAENVY 361
+ N +L Y +G +++A+ ++
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLF 406
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 155/382 (40%), Gaps = 43/382 (11%)
Query: 27 FAKCREL------FDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGG 80
F +CR+L II G P+ TF L+ ++G + EA + +RM+++G
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC---LEGRVSEALELVDRMVEMG- 188
Query: 81 YKPRLSLHNSLFRALVTKPADTSKRYL--KQAEFIFH-NLVTSG---------------L 122
+KP L N+L L + L K E+ N VT G +
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 123 EIQKHI-----------YGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILR 171
E+ + + Y +I ++D A +L EM++ GI ++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA--FNLFNEMEMKGITTNIITYNILIG 306
Query: 172 ACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSV 231
G ++ +++ P F ++ F K G+ ++ E+ +EM R +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 232 SVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLN-LHDKLESV 290
Y +I+ C+ +D + ++ + G P + +F+ L+N Y N + D LE
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 291 FSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLS 350
L+ + YN + ++G L+ A+E+F + S + V + I+L
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTYKILLDGLCD 485
Query: 351 SGEHVKAENVYNLMCQKKYDIE 372
+GE KA ++ + + K +++
Sbjct: 486 NGESEKALEIFEKIEKSKMELD 507
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 171/387 (44%), Gaps = 14/387 (3%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M++ + D + + D + K G LF+++ +G + T++IL+ + +A
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA-- 311
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
G D+ + MI K +++ + F L+ K L++AE + ++ G
Sbjct: 312 -GRWDDGAKLLRDMI-----KRKINPNVVTFSVLIDSFVKEGK--LREAEELHKEMIHRG 363
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
+ Y LI ++++D+A + + M G + ++ K +++
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKAN--QMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
+ K+ T + ++ F ++G+ + E+F+EM R ++ Y +++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVF-SACLKKCRP 300
LC E + + + ++ +S M+ + ++ +++ N + D +F S LK +P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 301 NRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENV 360
YN+ + L K G L +AE +F + +G G + NI++ A+L G+ K+ +
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKM-EEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 361 YNLMCQKKYDIEPSLMQKLDYVLSLSR 387
+ + + ++ S ++ + +LS R
Sbjct: 601 IEELKRCGFSVDASTIKMVIDMLSDGR 627
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 120/273 (43%), Gaps = 17/273 (6%)
Query: 11 FALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACS 70
F S+ L++ + G + +F +I G +P + ++ Y + G D+A
Sbjct: 374 FVYSSFLSN-ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNL---GRTDKAFQ 429
Query: 71 IYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRY--LKQAEFIFHNLVTSGLEIQKHI 128
+ +++ G P L+ L A R+ + AE +F N+ T GL++
Sbjct: 430 YFGALLK-SGNPPSLTTSTILIGA--------CSRFGSISDAESVFRNMKTEGLKLDVVT 480
Query: 129 YGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLK 188
Y L +H Y ++ L +EM+ AGI ++ + G ++EA +
Sbjct: 481 YNNL--MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 189 LLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQE 248
L+R P T AF + F+K G+ ++ ++ M + V ++ C+AQ
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 249 MDLSESLMQEFIESGMKPLMPSFSELMNLYLNL 281
M+ + L + +++G+KP + ++ L++ Y ++
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 154/386 (39%), Gaps = 17/386 (4%)
Query: 8 RFDFALSTKLADYMGKE-GKFAKCRELF---DDIINQGRVPSESTFHILVIAYLSAPVQG 63
+F+F ++ A+ + K GK EL + G P+ T++ L+ +SA
Sbjct: 180 KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF-- 237
Query: 64 CLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLE 123
+D A ++ M + G KP + +N++ + K T K K ++ T G E
Sbjct: 238 -VDSAERVFEVM-ESGRIKPDIVTYNTMIKGYC-KAGQTQKAMEK-----LRDMETRGHE 289
Query: 124 IQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAE 183
K Y +I Y D+ D +L +EM GI+ ++ K+G + E
Sbjct: 290 ADKITYMTMIQ-ACYADS-DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 184 ATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVL 243
+ ++R P + ++ +AK G ++ + M + V Y ++ L
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Query: 244 CRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNR 302
C+ ++ + G+ +S L++ D+ E +F +K C +
Sbjct: 408 CKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 467
Query: 303 TIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYN 362
YN +D+ K +D+A +F + EG T + I+LS + +A +++
Sbjct: 468 YCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWD 527
Query: 363 LMCQKKYDIEPSLMQKLDYVLSLSRK 388
+M K + + L L LS K
Sbjct: 528 MMIDKGITPTAACFRALSTGLCLSGK 553
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 154/373 (41%), Gaps = 28/373 (7%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
+Q + + F+ ++ + K GK K R++ +D+ G P+ +++ L+ Y
Sbjct: 219 IQPNVFTFNVVINA-----LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
G + +A ++ M++ P L+ N L L + +F ++
Sbjct: 274 NGKMYKADAVLKEMVE-NDVSPNLTTFNILIDGF------WKDDNLPGSMKVFKEMLDQD 326
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
++ Y LI I A S+R++M AG++ +++ K+ ++E
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEA--ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTG-YHKII 240
A + + P T+ + ++ + K+G+ + EM ER G V G Y+ +I
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM-EREGIVPDVGTYNCLI 443
Query: 241 EVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK--- 297
LCR ++ ++ L + G+ P + +F LM Y K ES +A L K
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR-----KGESRKAAMLLKEMS 497
Query: 298 ---CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEH 354
+P YN+ + K GNL A + T + + + S N++L Y G+
Sbjct: 498 KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL 557
Query: 355 VKAENVYNLMCQK 367
A + N M +K
Sbjct: 558 EDANMLLNEMLEK 570
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 136/328 (41%), Gaps = 33/328 (10%)
Query: 13 LSTKLADYMGKEGKFAKCRELFDDIINQGRV-PSESTFHILVIAYLSAPVQGCLDEAC-- 69
L+ KL + +++K R D + G S FH + + D C
Sbjct: 103 LTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMC----------DNVCVN 152
Query: 70 SIYNRMIQLG-GYKPRLSLHNSLFR----------ALVTKP---ADTSKRYLKQAEFIFH 115
SI M+ L R L F+ AL KP A + E+++
Sbjct: 153 SIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYK 212
Query: 116 NLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEG---RDVLLSILRA 172
++ ++ + +I +++AR + E+MK+ G + L+
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKAR--DVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 173 CSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVS 232
+G + +A+A +++ D P F ++ F K S+++F+EM ++ +
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 233 VTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYL-NLNLHDKLESVF 291
V Y+ +I LC ++ + S+ + + +G++P + +++ L+N + N L + L+
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 292 SACLKKCRPNRTIYNMYLDSLVKVGNLD 319
S + P +YNM +D+ K+G +D
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKID 418
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 12/272 (4%)
Query: 108 KQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEM-----KLAGIEEG 162
K+AE ++ L+ S + Y LI + I+RA + + + K G+
Sbjct: 172 KEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVY 231
Query: 163 RDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFR 222
+ +++ + G+ EEA + ++ R P T+ + + ++ K + S +++
Sbjct: 232 NAYIEGLMK---RKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYC 288
Query: 223 EMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLN 282
EM+ ++ Y ++ R + +E + ++ E G++P + ++ LM Y
Sbjct: 289 EMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG 348
Query: 283 LHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSC 341
+FS C P+R YN+ +D+ + G AE +F + G+ T +S
Sbjct: 349 YPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSH 407
Query: 342 NIILSAYLSSGEHVKAENVYNLMCQKKYDIEP 373
++LSAY + + K E + M + +EP
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSEN--GVEP 437
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/366 (18%), Positives = 158/366 (43%), Gaps = 48/366 (13%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
++++ ++ D L D G++ ++ + L+ ++ VP+E T+ +L+ AY A
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMA- 203
Query: 61 VQGCLDEACSIYNRMIQLGGYKPR---LSLHNSLFRALVTKPADTSKRYLKQAEFIFHNL 117
G ++ A + M Q P+ ++++N+ L+ + +T ++A +F +
Sbjct: 204 --GLIERAEVVLVEM-QNHHVSPKTIGVTVYNAYIEGLMKRKGNT-----EEAIDVFQRM 255
Query: 118 -------VTSGLEIQKHIYGG-----LIW-------LHSYQDNIDR-------------- 144
T + ++YG + W H + NI
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 315
Query: 145 ARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYR 204
+ + E+++ G+E V +++ + S+ G A + + + P ++
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 205 MEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKII-EVLCRAQEMDLSESLMQEFIESG 263
++ + + G H + +F EMK RLG H ++ +A+++ E++++E E+G
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMK-RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 264 MKPLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAE 322
++P + ++NLY L K+E + + C + + YN+ ++ K G L++ E
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 323 EIFTHI 328
E+F +
Sbjct: 495 ELFVEL 500
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 44 PSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTS 103
P+ T+ LV A+ +G ++A I+ ++ Q G +P + ++N+L + +
Sbjct: 297 PNICTYTALVNAFAR---EGLCEKAEEIFEQL-QEDGLEPDVYVYNALMESY------SR 346
Query: 104 KRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGR 163
Y A IF + G E + Y I + +Y + ++ EEMK GI
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYN--IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM 404
Query: 164 DVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFRE 223
+ +L A SK DV + EA ++ P T + ++ ++G+ K +I E
Sbjct: 405 KSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAE 464
Query: 224 MKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNL 283
M+ + ++ Y+ +I + +A ++ E L E E +P + +++ + Y L
Sbjct: 465 MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKL 524
Query: 284 HDKLESVFSACLKK-CRPN 301
+ K VF + C P+
Sbjct: 525 YVKCLEVFEEMIDSGCAPD 543
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 150/381 (39%), Gaps = 48/381 (12%)
Query: 23 KEGKFAKCRELFDDIINQ-GRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
KEG+ ++ NQ G P + TF+ LV A G + A I + M+Q GY
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA---GHVKHAIEIMDVMLQ-EGY 326
Query: 82 KPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDN 141
P + +NS+ L +K+A + ++T Y LI ++
Sbjct: 327 DPDVYTYNSVISGLCKLGE------VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 142 IDRA--------------------------------RIA-SLREEMKLAGIEEGRDVLLS 168
++ A R+A L EEM+ G E
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 169 ILRACSKDGDVEEAEATWLKLLRIDG-GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKER 227
++ + G ++EA LK + + G + ++ F K + ++ EIF EM+
Sbjct: 441 LIDSLCSKGKLDEA-LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 228 LGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKL 287
S + Y+ +I+ LC+++ ++ + LM + I G KP +++ L+ + K
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 288 ESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILS 346
+ A C P+ Y + L K G ++ A ++ I +G+ +T + N ++
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI-QMKGINLTPHAYNPVIQ 618
Query: 347 AYLSSGEHVKAENVYNLMCQK 367
+ +A N++ M ++
Sbjct: 619 GLFRKRKTTEAINLFREMLEQ 639
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/408 (20%), Positives = 154/408 (37%), Gaps = 68/408 (16%)
Query: 21 MGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGG 80
+G+ G F +++ +D+ + STF IL+ +Y +Q DE S+ + MI G
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ---DEILSVVDWMIDEFG 149
Query: 81 YKPRLSLHNSLFRALV-------------------TKPADTSKRYLKQAEFIFHNLVTSG 121
KP +N + LV KP ++ L +A H L +
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 122 LEIQKHIYGGLI--------WLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRAC 173
L ++ GL+ + Y + D +RE+M G + I+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 174 SKDGDVEEAEATWLKLLRIDGGPPTQ-AFVYRMEVFAKVGEHMKSLEIFREMKERLGSVS 232
K+G VE+A ++ DG P Q F + K G ++EI M +
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 233 VTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHD---KLES 289
V Y+ +I LC+ E+ + ++ + I P +++ L++ N + +L
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 290 VFSA-----------------CL----------------KKCRPNRTIYNMYLDSLVKVG 316
V ++ CL K C P+ YNM +DSL G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 317 NLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLM 364
LD+A + + G + + N ++ + + + +AE +++ M
Sbjct: 450 KLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 131/326 (40%), Gaps = 28/326 (8%)
Query: 9 FDFALSTKLADYMGKE-GKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQG-CLD 66
+D L + M KE G+F + I +G +P STF+ A +S ++G L
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLR------KIGERGYIPDSSTFN----AAMSCLLKGHDLV 372
Query: 67 EACSIYNRMIQLG---GYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLE 123
E C I++ + G G+ L L +L A D RYLKQ + GL
Sbjct: 373 ETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD---RYLKQ-------MGVDGLL 422
Query: 124 IQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAE 183
+ Y +I I+ A A EM+ GI + L S GDV++
Sbjct: 423 SSVYSYNAVIDCLCKARRIENA--AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVH 480
Query: 184 ATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVL 243
KLL P F + + E + + F+EM E + Y+ +I
Sbjct: 481 GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC 540
Query: 244 CRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNR 302
C + D S L + E+G+ P + +++ + + + K E + L+ +P+
Sbjct: 541 CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDN 600
Query: 303 TIYNMYLDSLVKVGNLDKAEEIFTHI 328
Y+ + +L + G +A E+F+ I
Sbjct: 601 FTYSTLIKALSESGRESEAREMFSSI 626
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 14/305 (4%)
Query: 16 KLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRM 75
++ D GK +F L D + ++ S TF IL+ Y+ A G EA +NRM
Sbjct: 156 EMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRA---GLASEAVHCFNRM 212
Query: 76 IQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWL 135
G +++ F +++ + KR +A+ F +L E +Y L+
Sbjct: 213 EDYGCVPDKIA-----FSIVISNL--SRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRG 264
Query: 136 HSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGG 195
I A + +EMKLAGIE ++ A + G + A + +L
Sbjct: 265 WCRAGEISEAE--KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCA 322
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESL 255
P F M V K G K L+++ +MK+ Y+ +IE CR + ++ + +
Sbjct: 323 PNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKV 382
Query: 256 MQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVK 314
+ I+ + +F+ + + ++S ++ KC PN YN+ + V
Sbjct: 383 LNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVG 442
Query: 315 VGNLD 319
+ D
Sbjct: 443 SKSTD 447
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 115/269 (42%), Gaps = 12/269 (4%)
Query: 10 DFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEAC 69
D + L + GK + K +L ++ + G +P +++++L+ AY + G + EA
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKS---GSIKEAM 337
Query: 70 SIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIY 129
++++M Q G P + ++ L S RY +F + +S + Y
Sbjct: 338 GVFHQM-QAAGCTPNANTYSVLLNLF-----GQSGRY-DDVRQLFLEMKSSNTDPDAATY 390
Query: 130 GGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKL 189
I + + + + +L +M IE + I+ AC K G E+A +
Sbjct: 391 N--ILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 190 LRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEM 249
D P ++A+ +E F + + ++L F M E + S+ +H ++ R +
Sbjct: 449 TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLV 508
Query: 250 DLSESLMQEFIESGMKPLMPSFSELMNLY 278
SE+++ ++SG+ +F+ + Y
Sbjct: 509 KESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 146/377 (38%), Gaps = 54/377 (14%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
M +Q W + + + T + +G+EG KC E+FD++ +QG S ++ L+ AY
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY---- 186
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTS 120
+ G Y+ L L + + + E I +++T
Sbjct: 187 ---------------GRNGRYETSLELLDRM-----------------KNEKISPSILTY 214
Query: 121 GLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
I GGL W + L EM+ GI+ ++L AC+ G +
Sbjct: 215 NTVINACARGGLDW----------EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 181 EAEATWLKLLRIDGG--PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHK 238
EAE + + DGG P + + +E F K+ K ++ EM +T Y+
Sbjct: 265 EAEMVFRTM--NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 239 IIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVF-SACLKK 297
++E ++ + + + + +G P ++S L+NL+ +D + +F
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 298 CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKA 357
P+ YN+ ++ + G + +F H E + + I+ A G H A
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLF-HDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 358 ENVYNLMCQKKYDIEPS 374
+ M DI PS
Sbjct: 442 RKILQYMTAN--DIVPS 456
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
Query: 22 GKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
GKE K RE+F ++I+ G P T+ I+V A G +DEA I M
Sbjct: 212 GKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA---GRVDEALGIVRSM------ 262
Query: 82 KPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDN 141
P + + +++ T R L++A F + SG++ ++ LI +
Sbjct: 263 DPSICKPTTFIYSVLVHTYGTENR-LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 321
Query: 142 IDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAF 201
+ + + +EMK G+ ILR + G+ +EA + K++++ P +
Sbjct: 322 M--KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTY 378
Query: 202 VYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIE 261
+++F + E + ++++ M+++ S+ + +I LC + + L++E IE
Sbjct: 379 TMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 438
Query: 262 SGMKPLMPSFSELMNLYLNLNLHDKLE 288
G++P +F L L + D L+
Sbjct: 439 MGIRPSGVTFGRLRQLLIKEEREDVLK 465
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 3/197 (1%)
Query: 169 ILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERL 228
+L A K +V +A+ + + +R P ++ + +E + K K+ E+FREM +
Sbjct: 173 LLSALCKSKNVRKAQEVF-ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 231
Query: 229 GSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLN-LHDKL 287
+ Y ++++LC+A +D + +++ S KP +S L++ Y N L + +
Sbjct: 232 CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV 291
Query: 288 ESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSA 347
++ + + ++N + + K + + + S +GV +SCNIIL
Sbjct: 292 DTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS-KGVTPNSKSCNIILRH 350
Query: 348 YLSSGEHVKAENVYNLM 364
+ GE +A +V+ M
Sbjct: 351 LIERGEKDEAFDVFRKM 367
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 54/315 (17%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK 82
K K + ELF+ ++++G +P+ T+ L+ + A G +++AC I+ RM G K
Sbjct: 524 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA---GQVEKACQIFERMC---GSK 577
Query: 83 --PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQD 140
P + ++ + D S+R N+VT YG L+
Sbjct: 578 DVPDVDMYFKQYD-------DNSER---------PNVVT---------YGALLDGFCKSH 612
Query: 141 NIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQA 200
++ AR L + M + G E + V +++ K G ++EA+ +K + G P
Sbjct: 613 RVEEAR--KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE--VKTEMSEHGFPATL 668
Query: 201 FVYR--MEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQE 258
+ Y ++ + KV + ++ +M E + +V Y ++I+ LC+ + D + LMQ
Sbjct: 669 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 728
Query: 259 FIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACL--------KKCRPNRTIYNMYLD 310
E G +P + +++ +++ + K+E+ CL K PN Y + +D
Sbjct: 729 MEEKGCQPNVVTYTAMID---GFGMIGKIET----CLELLERMGSKGVAPNYVTYRVLID 781
Query: 311 SLVKVGNLDKAEEIF 325
K G LD A +
Sbjct: 782 HCCKNGALDVAHNLL 796
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/365 (18%), Positives = 152/365 (41%), Gaps = 55/365 (15%)
Query: 14 STKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYN 73
ST L + K+ + +C+ + + ++ +G PS F+ LV AY ++ G A +
Sbjct: 300 STLLCGCLNKK-QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS---GDHSYAYKLLK 355
Query: 74 RMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQK------- 126
+M++ G + P ++N L ++ + L AE + ++ +G+ + K
Sbjct: 356 KMVKCG-HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 414
Query: 127 ------------------HIYGGLI-------WLHSYQDNIDRARIASLR-EEMKLAGIE 160
I G I + +Y N + +A L EEMK G+
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474
Query: 161 EGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEI 220
++ + K G +E+A + ++ + P + + + K + + E+
Sbjct: 475 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 534
Query: 221 FREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQ----------------EFIESGM 264
F M ++ Y +I+ C+A +++ + + + ++ ++
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 594
Query: 265 KPLMPSFSELMNLYLNLNLHDKLESVFSA-CLKKCRPNRTIYNMYLDSLVKVGNLDKAEE 323
+P + ++ L++ + + ++ + A ++ C PN+ +Y+ +D L KVG LD+A+E
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654
Query: 324 IFTHI 328
+ T +
Sbjct: 655 VKTEM 659
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 139/321 (43%), Gaps = 29/321 (9%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
T L + ++G+ + ++ I+ +G PS T+ L+ + G L ++Y
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC---GNLRSGFALYED 451
Query: 75 MIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFH-NLVTSGLEIQKHIYGGLI 133
MI++G Y P + ++ L L SK+ L F ++ + + ++ LI
Sbjct: 452 MIKMG-YPPDVVIYGVLVDGL-------SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 134 --W--LHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKL 189
W L+ + + + R+ M + GI+ +++R +G +EEA + ++
Sbjct: 504 DGWCRLNRFDEALKVFRL------MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 190 LRIDGGPPTQAFVYRMEVFAKVGEHMK---SLEIFREMKERLGSVSVTGYHKIIEVLCRA 246
++ P A+ ++ F K HMK L++F M+ S + + +I +L +
Sbjct: 558 FKMGLEPDALAYCTLIDAFCK---HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 247 QEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSAC-LKKCRPNRTIY 305
++ + IE M+P + +++ ++ Y +L D+ E +F + PN
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 306 NMYLDSLVKVGNLDKAEEIFT 326
+ + L K ++D A +F+
Sbjct: 675 TILIHVLCKNNDMDGAIRMFS 695
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 13/257 (5%)
Query: 22 GKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
GK K LF + NQG P E T++ L + +DEA I M+ G
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDL---VDEAQRILAEMLD-SGC 581
Query: 82 KPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDN 141
KP + ++ + V L A ++ + +G++ + +YG LI +
Sbjct: 582 KPGCKTYAAMIASYV------RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 142 IDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAF 201
++ A I R M+ G++ VL S+++A SK G +EEA + K+ +GGP A
Sbjct: 636 VEEA-IQYFRM-MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 202 VYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIE 261
+ + A +G ++ IF ++E+ G+ V + ++ + +D + + +E E
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREK-GTCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 262 SGMKPLMPSFSELMNLY 278
SG+ SF+++M Y
Sbjct: 753 SGLLSDCTSFNQVMACY 769
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/345 (18%), Positives = 149/345 (43%), Gaps = 16/345 (4%)
Query: 22 GKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
G G ++ L + +G P T++IL+ + A G ++ A Y ++ ++G +
Sbjct: 351 GTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADA---GDIEAALEYYRKIRKVGLF 407
Query: 82 KPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDN 141
P H ++ L ++ + + E + + + + I +H ++ ++ +
Sbjct: 408 -PDTVTHRAVLHILC------QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL 460
Query: 142 IDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGG-PPTQA 200
+ +A+ +L E +L + L +++ ++ G EAE + + G
Sbjct: 461 VVQAK--ALFERFQLDCVLSS-TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE 517
Query: 201 FVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFI 260
+ ++ + K H K+L +F+ MK + Y+ + ++L +D ++ ++ E +
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 261 ESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLD 319
+SG KP +++ ++ Y+ L L ++ A K +PN +Y ++ + G ++
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 320 KAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLM 364
+A + F + GV ++ AY G +A VY+ M
Sbjct: 638 EAIQYF-RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 16/267 (5%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M++ + L + +E K + ++ D + + G P+ T++ L+ +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV-- 351
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTS--KRYLKQAEFIFHNLVT 119
G L +A S+ R ++ G P L +N L K DTS + +K+ E
Sbjct: 352 -GKLGKALSLC-RDLKSRGLSPSLVTYNILVSGFCRK-GDTSGAAKMVKEME-------E 401
Query: 120 SGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDV 179
G++ K Y LI + DN+++A LR M+ G+ ++ G +
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKA--IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 180 EEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKI 239
EA + ++ + P + + + K G ++L++ +EM+E+ + +V Y +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 240 IEVLCRAQEMDLSESLMQEFIESGMKP 266
IEVLC+ ++ +E L+++ I+SG+ P
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 134/321 (41%), Gaps = 13/321 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
+ + + + + T L D K+G+ K ++LF ++ G V +E T+ +L+ V
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+ + +Y +M Q G P L +N + L K T K A +F + G
Sbjct: 249 K---KQGFEMYEKM-QEDGVFPNLYTYNCVMNQLC-KDGRT-----KDAFQVFDEMRERG 298
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
+ Y LI + ++ A + ++MK GI +++ G + +
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEAN--KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
A + L P + + F + G+ + ++ +EM+ER S Y +I+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRP 300
R+ M+ + L E G+ P + ++S L++ + ++ +F + ++K C P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 301 NRTIYNMYLDSLVKVGNLDKA 321
N IYN + K G+ +A
Sbjct: 477 NEVIYNTMILGYCKEGSSYRA 497
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L D + KEG + L +I +G P+ T+ ++ G L+EA ++NR++
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK---MGKLEEAFVLFNRIL 339
Query: 77 QLGGYKPRLSLHNSLFRALVTKP---------ADTSKRYLKQAEFIFHNLVTSGL----- 122
+G L+ +L + K D +R + Q + +N V +GL
Sbjct: 340 SVGIEVDEF-LYVTLIDGICRKGNLNRAFSMLGDMEQRGI-QPSILTYNTVINGLCMAGR 397
Query: 123 -----EIQKHIYGGLIWLHSYQD------NIDRARIASLREEMKLAGIEEGRDVLLSILR 171
E+ K + G +I + D NID + +R A I + +L+
Sbjct: 398 VSEADEVSKGVVGDVITYSTLLDSYIKVQNIDA--VLEIRRRFLEAKIPMDLVMCNILLK 455
Query: 172 ACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSV 231
A G EA+A + + +D P T + ++ + K G+ ++LE+F E+++ S
Sbjct: 456 AFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA 515
Query: 232 SVTGYHKIIEVLCRAQEMDLSESLMQEFIESGM 264
+V Y++II+ LC+ +D + ++ E E G+
Sbjct: 516 AVC-YNRIIDALCKKGMLDTATEVLIELWEKGL 547
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 21/309 (6%)
Query: 68 ACSIYNRMIQLGGYKPRLSLHNSLFRALVT-KPADTSKRYLKQAEFIFHNLVTSGLEIQK 126
A + + G P L + +L AL D + +++ E G E
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE-------DEGFEFDC 242
Query: 127 HIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVL-LSIL-RACSKDGDVEEAEA 184
Y W+H Y A + +L ++ ++ RDV+ SIL SK+G+VEEA
Sbjct: 243 VFYSN--WIHGYFKG--GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALG 298
Query: 185 TWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLC 244
K+++ P + + K+G+ ++ +F + V Y +I+ +C
Sbjct: 299 LLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358
Query: 245 RAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRTI 304
R ++ + S++ + + G++P + +++ ++N L + ++ K +
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN---GLCMAGRVSEADEVS-KGVVGDVIT 414
Query: 305 YNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLM 364
Y+ LDS +KV N+D EI + + + CNI+L A+L G + +A+ +Y M
Sbjct: 415 YSTLLDSYIKVQNIDAVLEIRRRFLEAK-IPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Query: 365 CQKKYDIEP 373
+ D+ P
Sbjct: 474 --PEMDLTP 480
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 49/315 (15%)
Query: 44 PSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTS 103
P T++I++ + S +G LD A + N+++ +P + + L A + +
Sbjct: 191 PDTVTYNIMIGSLCS---RGKLDLALKVLNQLLS-DNCQPTVITYTILIEATMLEGG--- 243
Query: 104 KRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGR 163
+ +A + +++ GL+ Y +I + +DRA + ++L G E
Sbjct: 244 ---VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA--FEMVRNLELKGCEPDV 298
Query: 164 DVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFRE 223
+LRA G EE E K+ P + + + G+ +++ + +
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 224 MKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNL 283
MKE+ + Y +I CR +D++ ++ I G
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG-------------------- 398
Query: 284 HDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGE-GVGVTGRSCN 342
C P+ YN L +L K G D+A EIF + GE G S N
Sbjct: 399 --------------CLPDIVNYNTVLATLCKNGKADQALEIFGKL--GEVGCSPNSSSYN 442
Query: 343 IILSAYLSSGEHVKA 357
+ SA SSG+ ++A
Sbjct: 443 TMFSALWSSGDKIRA 457
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/391 (17%), Positives = 156/391 (39%), Gaps = 23/391 (5%)
Query: 3 QQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQ 62
Q+ +R D + + + KEG+ ++ ++L ++++++G P + + V+
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR--L 467
Query: 63 GCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKR---YLKQAEFIFHNLVT 119
G +D+A + +++ G+KP + +L + R + + + N +T
Sbjct: 468 GEVDKAKKLL-QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 120 SGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDV 179
+ +H + + + EM L G G + +L++ +DG
Sbjct: 527 YS-----------VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 575
Query: 180 EEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKI 239
EA + L F + F + E +L + +M V Y +
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 635
Query: 240 IEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACL--KK 297
++ L + + + LM++ + G+ P ++ +++ Y + D L ++ + +K
Sbjct: 636 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQK 695
Query: 298 CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKA 357
C RTIYN ++ L +G L++A+ + + ++C ++ YL G + A
Sbjct: 696 C---RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRS-DAKTCYALMEGYLKKGVPLSA 751
Query: 358 ENVYNLMCQKKYDIEPSLMQKLDYVLSLSRK 388
V M + + + +KL L L K
Sbjct: 752 YKVACRMFNRNLIPDVKMCEKLSKRLVLKGK 782
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 134/318 (42%), Gaps = 13/318 (4%)
Query: 12 ALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSI 71
L T L + K GK +K EL+ +N+G V T + L+ A G LDEA I
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA---GKLDEAFRI 527
Query: 72 YNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGG 131
++ G R+S +N+L K+ L +A +V GL+ + Y
Sbjct: 528 QKEILGRGCVMDRVS-YNTLISGCC------GKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 132 LIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLR 191
LI + ++ A ++ K G+ ++ C K EE + + +++
Sbjct: 581 LICGLFNMNKVEEA--IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 192 IDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDL 251
+ P T + + + + + G +LE+ +MK + S + Y +I+ + ++
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 252 SESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSAC-LKKCRPNRTIYNMYLD 310
++ L +E G++P + ++ L++ Y L K+E + K PN+ Y + +
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758
Query: 311 SLVKVGNLDKAEEIFTHI 328
+ GN+ +A + +
Sbjct: 759 GYARDGNVTEASRLLNEM 776
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESL 255
P F + F K G+ +++++F +M+E + +V ++ +I+ L D +
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 256 MQEFIESGMKPLMPSFSELM-NLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVK 314
++ +E GM+P + ++S L+ L + D + K PN +YN +DS ++
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 315 VGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDI 371
G+L+KA EI + S +G+ +T + N ++ Y +G+ AE + M +++
Sbjct: 378 AGSLNKAIEIKDLMVS-KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 139/329 (42%), Gaps = 27/329 (8%)
Query: 32 ELFDDIINQGRVPSESTFHILVIAYLSA-PVQGCLDEACSIYNRMIQLGGYKPRLSLHNS 90
++F + N+G PS++T +IL+ + + A Q C C ++ + + G P + L +
Sbjct: 212 DVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC----CEAFDVVCK--GVSPDVYLFTT 265
Query: 91 LFRALVT--KPADTSKRYLKQAEF-IFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARI 147
A K + K + K E + N+VT I GL Y +
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID-----GLGMCGRYDEAF----- 315
Query: 148 ASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYR--M 205
+E+M G+E +++ ++ + +A LK + G PP VY +
Sbjct: 316 -MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV-LKEMTKKGFPP-NVIVYNNLI 372
Query: 206 EVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMK 265
+ F + G K++EI M + S++ + Y+ +I+ C+ + D +E L++E + G
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 266 PLMPSFSELMNLYLN-LNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEI 324
SF+ ++ L + L L V L+ P + + L K G KA E+
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 325 FTHICSGEGVGVTGRSCNIILSAYLSSGE 353
+ + +G V R+ N +L +G+
Sbjct: 493 WFQFLN-KGFVVDTRTSNALLHGLCEAGK 520
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 153/380 (40%), Gaps = 30/380 (7%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L + EGK +L +++++ G P+ TF+ L+ ++S +G EA ++ M+
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS---EGNFKEALKMF-YMM 359
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEF-----IFHNLVTSGLEIQKHIYGG 131
+ G P + L L K AEF + + +G+ + + Y G
Sbjct: 360 EAKGLTPSEVSYGVLLDGLC-----------KNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 132 LIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLR 191
+I +D A + L EM GI+ +++ K G + A+ ++ R
Sbjct: 409 MIDGLCKNGFLDEAVV--LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 192 IDGGPPTQAFVYRMEVF--AKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEM 249
+ P +Y ++ ++G +++ I+ M + ++ ++ LC+A ++
Sbjct: 467 VGLSP--NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 250 DLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKC-RPNRTIYNMY 308
+E M+ G+ P SF L+N Y N K SVF K P Y
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 309 LDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKK 368
L L K G+L +AE+ + V N +L+A SG KA +++ M Q+
Sbjct: 585 LKGLCKGGHLREAEKFLKSL-HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR- 642
Query: 369 YDIEPSLMQKLDYVLSLSRK 388
I P + L RK
Sbjct: 643 -SILPDSYTYTSLISGLCRK 661
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 162/378 (42%), Gaps = 55/378 (14%)
Query: 26 KFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRL 85
K ++ L D ++ +G P T+ ++V +G D A ++ N+M Q G +P +
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK---RGDTDLAFNLLNKMEQ-GKLEPGV 256
Query: 86 SLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLI-WLHSYQDNIDR 144
++N++ L +++ A +F + T G+ Y LI L +Y D
Sbjct: 257 LIYNTIIDGLC------KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 145 ARIASLREEMKLAGIEEGRDVLL--SILRACSKDGDVEEAEATWLKLL------------ 190
+R+ S E K+ DV +++ A K+G + EAE + +++
Sbjct: 311 SRLLSDMIERKI-----NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 191 ----------RIDGG-------------PPTQAFVYRMEVFAKVGEHMKSLEIFREMKER 227
R+D P + ++ F K + +E+FREM +R
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 228 LGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKL 287
+ Y+ +I+ L +A + D+++ + +E + G+ P + +++ L++ +K
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 288 ESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILS 346
VF + K P YN+ ++ + K G ++ ++F ++ S +GV + N ++S
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMIS 544
Query: 347 AYLSSGEHVKAENVYNLM 364
+ G +A+ ++ M
Sbjct: 545 GFCRKGSKEEADALFKEM 562
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 12/252 (4%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
+ L D KEGK + +L+D+++ + PS T+ L+ + + LDEA ++
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC---MHDRLDEAKQMFEF 386
Query: 75 MIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIW 134
M+ + P + +N+L + + +++ +F + GL Y LI
Sbjct: 387 MVSKHCF-PDVVTYNTLIKGFC------KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 135 LHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG 194
+ D A+ + +EM G+ ++L K+G +E+A + L R
Sbjct: 440 GLFQAGDCDMAQ--EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 195 GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSES 254
P + +E K G+ ++F + + V Y+ +I CR + +++
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 255 LMQEFIESGMKP 266
L +E E G P
Sbjct: 558 LFKEMKEDGTLP 569
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 132/278 (47%), Gaps = 17/278 (6%)
Query: 13 LSTKLADYM----GKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEA 68
LST + ++M K+ K +L+ +++ +G P+E T+ ++V +Y QG +EA
Sbjct: 256 LSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK---QGFKEEA 312
Query: 69 CSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHI 128
+ M LG + P ++S+ +L K D K A ++ ++ + G+ +
Sbjct: 313 LKAFGEMKSLG-FVPEEVTYSSVI-SLSVKAGDWEK-----AIGLYEDMRSQGIVPSNYT 365
Query: 129 YGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLK 188
++ L+ +N +A SL +M+ I + I+R K G +A++ + +
Sbjct: 366 CATMLSLYYKTENYPKA--LSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEE 423
Query: 189 LLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQE 248
R++ + ++ +V G +K+L++ MK R +S Y +++ + Q
Sbjct: 424 TERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQN 483
Query: 249 MDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDK 286
+D +E + ++G+ P S ++++NLY LNL +K
Sbjct: 484 VDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEK 520
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 162/381 (42%), Gaps = 38/381 (9%)
Query: 27 FAKCREL------FDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGG 80
F +C +L +I G PS TF L+ + + +A ++++M+ +G
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR---VYDALYMFDQMVGMG- 181
Query: 81 YKPRLSLHNSLFRALV-TKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLI-WLHSY 138
YKP + ++N++ L +K D + L + E G+ Y LI L S
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRME-------KDGIGPDVVTYNSLISGLCSS 234
Query: 139 QDNIDRARIASLREEMKLAGIEEGRDVLL--SILRACSKDGDVEEAEATWLKLLRIDGGP 196
D R+ S + ++ DV +++ AC K+G V EAE + +++R P
Sbjct: 235 GRWSDATRMVSCMTKREIY-----PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 197 PTQAF---VYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSE 253
+ +Y + +++++ E + E+F M + V Y +I C++++++
Sbjct: 290 DIVTYSLLIYGLCMYSRLDE---AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 254 SLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVF-SACLKKCRPNRTIYNMYLDSL 312
L E + G+ +++ L+ Y + E +F PN YN+ L L
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 313 VKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVY-NLMCQKKYDI 371
G ++KA I + G+ + NII+ +GE A ++Y +L CQ +
Sbjct: 407 CDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ---GL 462
Query: 372 EPSLMQKLDYVLSLSRKEVKK 392
P + +L L +K +++
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRR 483
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 151/337 (44%), Gaps = 16/337 (4%)
Query: 33 LFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLF 92
LFD + +G +P+ T++ L+ Y +D+ + R + L G +P L +N +
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRK---IDDGFKLL-RSMALKGLEPNLISYNVVI 282
Query: 93 RALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLRE 152
L + +K+ F+ + G + + Y LI + + N +A + +
Sbjct: 283 NGLCREGR------MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV--MHA 334
Query: 153 EMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQ-AFVYRMEVFAKV 211
EM G+ S++ + K G++ A +L +R+ G P + + ++ F++
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRA-MEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 212 GEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSF 271
G ++ + REM + S SV Y+ +I C +M+ + +++++ E G+ P + S+
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 272 SELMNLYL-NLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICS 330
S +++ + + ++ + L K +P+ Y+ + + +A +++ +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 331 GEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQK 367
G+ + +++AY G+ KA ++N M +K
Sbjct: 514 -VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 9/223 (4%)
Query: 157 AGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMK 216
G+ L+SI+ A + G EAEA + +L + P T+A+ ++ + K G
Sbjct: 298 TGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKD 357
Query: 217 SLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMN 276
+ + EM++R S Y +I+ A + + +++E ++P FS L+
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 277 LYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVG 335
+ + K V +P+R YN+ +D+ K LD A F + S EG+
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS-EGIE 476
Query: 336 VTGRSCNIILSAYLSSGEHVKAENVYNLM-------CQKKYDI 371
+ N ++ + G H+ AE ++ M C Y+I
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 6/266 (2%)
Query: 103 SKRYLKQAEFIFH---NLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGI 159
S R+ +Q + I +V G+E+ Y +I + ++A E M G+
Sbjct: 195 SLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKA--IEWFERMYKTGL 252
Query: 160 EEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLE 219
+IL SK G VEE + + + + P AF ++F + G++
Sbjct: 253 MPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRY 312
Query: 220 IFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYL 279
+ +EMK +V Y+ ++E + RA + L+ SL E +E+G+ P + + L+ +Y
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
Query: 280 NLN-LHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTG 338
D L+ KK + +YN L+ +G ++AE +F +
Sbjct: 373 KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDN 432
Query: 339 RSCNIILSAYLSSGEHVKAENVYNLM 364
S +L+ Y S G+ KA ++ M
Sbjct: 433 FSYTAMLNIYGSGGKAEKAMELFEEM 458
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 149/374 (39%), Gaps = 31/374 (8%)
Query: 10 DFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEAC 69
D L D + G F L + ++G VP + T+ ++ + + ++EAC
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR---VEEAC 517
Query: 70 SIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIY 129
+++ + Q G P + ++ +L K + +L + + N + + L I+
Sbjct: 518 DLFDSLEQ-KGVNPNVVMYTALIDGYC-KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 130 GGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKL 189
G + A + L E+M G++ ++ KDGD + A + + ++
Sbjct: 576 G-----LCADGKLKEATL--LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 190 LRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEM 249
L P + ++ + + G + + ++ +M+E S + Y +I+ +
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 250 DLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSAC--------------L 295
+ + +++ ++G +P +F L+ L + + S C L
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 296 KK-----CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLS 350
+K PN Y + + +VGNL AE++F H+ EG+ + N +LS
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 351 SGEHVKAENVYNLM 364
+H +A V + M
Sbjct: 809 LKKHNEAAKVVDDM 822
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 152 EEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKV 211
+EMK G+E V S++R G+++ +A + ++L P + + F K+
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 212 GEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSF 271
G+ ++ EIF M ER +V Y +I+ LC + + L+ IE +P ++
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 272 SELMNLYLNLNL-HDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIF 325
+ ++N L D +E V ++ RP+ YN+ L L G+LD+A ++
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESL 255
P ++ + F + E K+LE+ EMK S S+ + +I+ C+A +MD +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 256 MQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKC-RPNRTIYNMYLDSLVK 314
++E G++ + ++ L+ + + D+ +++F L++ P YN + K
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 315 VGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDIEPS 374
+G L +A EIF + GV + ++ G+ +A + NLM +K D EP+
Sbjct: 295 LGQLKEASEIFEFMIE-RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK--DEEPN 351
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 146/340 (42%), Gaps = 23/340 (6%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M+ R + + L + G+++ +L D+I + P+ TF+ L+ A++
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK--- 342
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+G EA +Y+ MI+ P + +NSL L +A+ +F +V+
Sbjct: 343 EGKFVEAEKLYDDMIKRS-IDPDIFTYNSLVNGFCMHDR------LDKAKQMFEFMVSKD 395
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
Y LI ++ L EM G+ ++++ DGD +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDG--TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 182 AEATWLKLLRIDGGPP-TQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKII 240
A+ + +++ DG PP + ++ G+ K+LE+F M++ + + Y +I
Sbjct: 454 AQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 241 EVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCR- 299
E +C+A ++D L G+KP + +++ +++ + L L+ + A LKK +
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL---LQEAY-ALLKKMKE 568
Query: 300 ----PNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVG 335
PN YN + + ++ G+ + E+ + S VG
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 608
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 128/280 (45%), Gaps = 29/280 (10%)
Query: 114 FHNLVTSGLEIQK------HIYGGLIWLHSYQDNIDRA-RIASLR-------------EE 153
+N SGL + +Y + ++ Y DN+ A I +LR E+
Sbjct: 275 LYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEK 334
Query: 154 MKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYR--MEVFAKV 211
M G++ +DV ++++ +G EEA ++ + G + VY M+ + K
Sbjct: 335 MSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEK--KGIRSNTIVYNTLMDAYNK- 391
Query: 212 GEHMKSLE-IFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPS 270
H++ +E +F EM+++ S Y+ +++ R + D+ E+L++E + G++P + S
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 271 FSELMNLYLNLNLHDKLESVFSACLKKC--RPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
++ L++ Y + + +KK +P+ Y + + G +KA F +
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 329 CSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKK 368
C EG+ + + +L A+ SG+ K ++ LM ++K
Sbjct: 512 CK-EGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREK 550
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 144/323 (44%), Gaps = 22/323 (6%)
Query: 14 STKLADYMGKEGKFAKCRELFDD-----IINQGRVPSESTFHILVIAYLSAPVQGCLDEA 68
S + Y G F +C ++ + I+ + +++IL+ L G +DEA
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLE---NGKIDEA 378
Query: 69 CSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHI 128
I+ R++ GY + + L Y+ +A + + +SG + +
Sbjct: 379 TMIW-RLMPAKGYAADKTTYGIFIHGLCVNG------YVNKALGVMQEVESSGGHLDVYA 431
Query: 129 YGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLK 188
Y +I + ++ A ++L +EM G+E V +++ +D + EA + +L+
Sbjct: 432 YASIIDCLCKKKRLEEA--SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA-SFFLR 488
Query: 189 LLRIDGGPPTQAFVYRMEV--FAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRA 246
+ +G PT Y + + K G+ ++ +EM E + Y ++ LCR
Sbjct: 489 EMGKNGCRPT-VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 247 QEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLN-LHDKLESVFSACLKKCRPNRTIY 305
+++DL+ L +F++SG++ + + L++ ++ L D + + + + C N Y
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 306 NMYLDSLVKVGNLDKAEEIFTHI 328
N ++ KVG+ ++A I+ ++
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYM 630
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 136/311 (43%), Gaps = 12/311 (3%)
Query: 66 DEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQ 125
D+A ++ RM ++ G +P + +N+L A V +K+++K E +F T+G+
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFV-----EAKQWVK-VESLFAYFETAGVAPN 148
Query: 126 KHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEAT 185
Y LI + + ++AR + M G + +++ +K G +++A
Sbjct: 149 LQTYNVLIKMSCKKKEFEKAR--GFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 186 WLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKI-IEVLC 244
+ ++ P + ++ F K +H ++E++ + E H I I L
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 245 RAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSAC-LKKCRPNRT 303
+ +D + + ++ + + ++S L++ + DK ESVF+ +K +
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 304 IYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNL 363
YN L + G + ++ E++ + V + S NI++ L +G+ +A ++ L
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV--SYNILIKGLLENGKIDEATMIWRL 384
Query: 364 MCQKKYDIEPS 374
M K Y + +
Sbjct: 385 MPAKGYAADKT 395
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 151/367 (41%), Gaps = 37/367 (10%)
Query: 30 CRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHN 89
C ++F QG+V + ++F L Q ++ YN M+ + L
Sbjct: 452 CNKIFLLFCKQGKVDAATSF-------LKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLAR 504
Query: 90 SLFRALVTK---PADTSKRYLKQAEF----------IFHNLVTSGLEIQKHIYGGLIWLH 136
S+F ++ K P + + L F + + + S E + IY +I
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTII--- 561
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLL-----SILRACSKDGDVEEAEATWLKLLR 191
+ + + S +EM I+E R + SI+ K GD + A T+ ++
Sbjct: 562 ---NGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Query: 192 IDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDL 251
P F + F K +LE+ EMK + + Y +I+ C+ +M
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 252 SESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLD 310
+ +L E E G+ P + ++ L++ + NL D ++ + + Y +D
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 311 SLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLS-SGEHVKAENVYNLMCQKKY 369
L+K GN++ A ++++ + G+ V +++L LS G+ +KA + M KK
Sbjct: 739 GLLKDGNINLASDLYSELLD-LGI-VPDEILHMVLVNGLSKKGQFLKASKMLEEM--KKK 794
Query: 370 DIEPSLM 376
D+ P+++
Sbjct: 795 DVTPNVL 801
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 12/267 (4%)
Query: 10 DFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEAC 69
D L D M K G+ K R +F++I + VP ++ IL+ + A G +E
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA---GFANETY 572
Query: 70 SIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIY 129
++ M + G L + ++ K + +A + + T G E Y
Sbjct: 573 ELFYSMKEQG-----CVLDTRAYNIVIDGFCKCGK--VNKAYQLLEEMKTKGFEPTVVTY 625
Query: 130 GGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKL 189
G +I + D +D A + L EE K IE + S++ K G ++EA +L
Sbjct: 626 GSVIDGLAKIDRLDEAYM--LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 190 LRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEM 249
++ P + ++ K E ++L F+ MKE + + Y +I LC+ ++
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 250 DLSESLMQEFIESGMKPLMPSFSELMN 276
+ + QE + GMKP S++ +++
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMIS 770
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 132/306 (43%), Gaps = 13/306 (4%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L D + + GK EL D + G P+ T +I+V + LDEAC+++ M
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK---LDEACAMFEEM- 438
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLH 136
YK + F +L+ + + A ++ ++ S +Y LI
Sbjct: 439 ---DYKV-CTPDEITFCSLIDGLGKVGR--VDDAYKVYEKMLDSDCRTNSIVYTSLI--K 490
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGP 196
++ ++ + + ++M +L + + K G+ E+ A + ++ P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 197 PTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLM 256
+++ + K G ++ E+F MKE+ + Y+ +I+ C+ +++ + L+
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 257 QEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVF-SACLKKCRPNRTIYNMYLDSLVKV 315
+E G +P + ++ +++ ++ D+ +F A K+ N IY+ +D KV
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 316 GNLDKA 321
G +D+A
Sbjct: 671 GRIDEA 676
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 142/332 (42%), Gaps = 26/332 (7%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
MM++ +R F+ T L LF + G P+ F L+ +
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAK-- 215
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTS 120
+G +D A S+ + M L L+ + K + A FH + +
Sbjct: 216 -EGRVDSALSLLDEM-----KSSSLDADIVLYNVCIDSFGKVGK--VDMAWKFFHEIEAN 267
Query: 121 GLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLS-----ILRACSK 175
GL+ + Y +I + + +D A EM +E+ R V + ++
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAV------EM-FEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 176 DGDVEEAEATWLKLLRIDGGPPTQ-AFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVT 234
G +EA + L+ R G P+ A+ + K+G+ ++L++F EMK+ + +++
Sbjct: 321 AGKFDEA-YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLS 378
Query: 235 GYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSAC 294
Y+ +I++LCRA ++D + L ++G+ P + + + +++ D+ ++F
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 295 -LKKCRPNRTIYNMYLDSLVKVGNLDKAEEIF 325
K C P+ + +D L KVG +D A +++
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 127/307 (41%), Gaps = 26/307 (8%)
Query: 28 AKCR--ELFDDIINQGRV----PSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGY 81
A+CR + D I+ + V PS +T +V+ + A L E + +M++ +
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANK---LREGYDVV-QMMRKFKF 164
Query: 82 KPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDN 141
+P S + +L A + S L +F + G E H++ LI + +
Sbjct: 165 RPAFSAYTTLIGAF--SAVNHSDMMLT----LFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 142 IDRARIASLREEMKLAGIEEGRDVLLSILRACSKD-GDVEEAEATWLKLLRIDGG---PP 197
+D A SL +EMK + + D + + C G V + + W I+ P
Sbjct: 219 VDSA--LSLLDEMKSSSL----DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 198 TQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQ 257
+ + V K +++E+F +++ Y+ +I A + D + SL++
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 258 EFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGN 317
G P + +++ ++ + D+ VF K PN + YN+ +D L + G
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 318 LDKAEEI 324
LD A E+
Sbjct: 393 LDTAFEL 399
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 164/394 (41%), Gaps = 51/394 (12%)
Query: 10 DFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYL------------ 57
D TKL + + + G+ + +F+ +I +G PS T+ LV A
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 58 --------------------SAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRAL-- 95
++ G LD+A I+ +M + G KP S N+L +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKE-SGCKPTASTFNTLIKGYGK 436
Query: 96 VTKPADTSK--RYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREE 153
+ K ++S+ + + E + N T + +Q W + Q I+ A ++ +
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQA-------WCN--QRKIEEA--WNIVYK 485
Query: 154 MKLAGIEEGRDVLLSILRACSKDGDVEEAEATWL-KLLRIDGGPPTQAFVYRMEVFAKVG 212
M+ G++ ++ +A ++ G AE + ++L P + + + + G
Sbjct: 486 MQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEG 545
Query: 213 EHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFS 272
+ ++L F MKE ++ ++ +I+ +MD ++ E G+KP + +FS
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 273 ELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSG 331
LMN + ++ + E +++ L+ P+ +++ + G +KAE+I +
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM-RK 664
Query: 332 EGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMC 365
GV I+S + S+GE KA VY MC
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 698
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 150 LREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFA 209
+++ K A EE ++ L+ + A KD + + + GG R ++
Sbjct: 268 FKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMN 327
Query: 210 KVGEHMKSLE---IFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKP 266
+ E + E IF + E S+ Y ++ L R + SL+ + ++G+KP
Sbjct: 328 GLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKP 387
Query: 267 LMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIF 325
F+ ++N D+ +F + C+P + +N + K+G L+++ +
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 326 THICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQ-KKYDIEPSLM 376
+ E + R+CNI++ A+ + K E +N++ + + Y ++P ++
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCN---QRKIEEAWNIVYKMQSYGVKPDVV 496
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 128/329 (38%), Gaps = 48/329 (14%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
+ +Q ++ D T + +G+ +F +L D+++ G P+ T
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT------------ 401
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTS 120
YNR+I S RA YL +A +F+ + +
Sbjct: 402 -----------YNRLIH------------SYGRA----------NYLNEAMNVFNQMQEA 428
Query: 121 GLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
G + + Y LI +H+ +D A + + M+ G+ I+ K G +
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIA--MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 181 EAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKII 240
A + +++ P + M++ AK + +L+++R+M+ Y ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 241 EVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CR 299
EVL ++ +E++ E + P P + L++L+ +K + A L R
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 300 PNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
PN N L + ++V + +A E+ ++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 128/329 (38%), Gaps = 48/329 (14%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
+ +Q ++ D T + +G+ +F +L D+++ G P+ T
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT------------ 401
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTS 120
YNR+I S RA YL +A +F+ + +
Sbjct: 402 -----------YNRLIH------------SYGRA----------NYLNEAMNVFNQMQEA 428
Query: 121 GLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
G + + Y LI +H+ +D A + + M+ G+ I+ K G +
Sbjct: 429 GCKPDRVTYCTLIDIHAKAGFLDIA--MDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 181 EAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKII 240
A + +++ P + M++ AK + +L+++R+M+ Y ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 241 EVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CR 299
EVL ++ +E++ E + P P + L++L+ +K + A L R
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 300 PNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
PN N L + ++V + +A E+ ++
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 128/307 (41%), Gaps = 39/307 (12%)
Query: 1 MMQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
+ +Q ++ D T + +G+ +F + +L D+++ G P+ T++ L+ +Y A
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRA- 407
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLS----------------------------LHNSLF 92
L EA +++N+M + G R++ L F
Sbjct: 408 --NYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTF 465
Query: 93 RALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLRE 152
V +L A +F +V G + +I LH+ N + A L
Sbjct: 466 TYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA--LKLYR 523
Query: 153 EMKLAGIEEGR---DVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFA 209
+M+ AG + + +++ +L C G +EEAE + ++ R + P + ++++
Sbjct: 524 DMQNAGFQPDKVTYSIVMEVLGHC---GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 210 KVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMP 269
K G K+ + ++ M + +V + ++ R M + +L+Q + G+ P +
Sbjct: 581 KAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQ 640
Query: 270 SFSELMN 276
+++ L++
Sbjct: 641 TYTLLLS 647
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 119/275 (43%), Gaps = 9/275 (3%)
Query: 113 IFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRA 172
+ +V G + Y LI HSY ++ +M+ AG E R +++
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLI--HSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDI 438
Query: 173 CSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVS 232
+K G ++ A + ++ P T + + K G + +F EM + + +
Sbjct: 439 HAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 233 VTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFS 292
+ ++ +I + +A+ + + L ++ +G +P ++S +M + + ++ E VF+
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 293 ACLKKC-RPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSS 351
+K P+ +Y + +D K GN+DKA + + + G+ +CN +LS +L
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA-GLRPNVPTCNSLLSTFLRV 617
Query: 352 GEHVKAENVYNLMCQKKYDIEPSLMQKLDYVLSLS 386
+A N+ M + PSL Y L LS
Sbjct: 618 HRMSEAYNLLQSML--ALGLHPSLQT---YTLLLS 647
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 132/310 (42%), Gaps = 16/310 (5%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
T+L +GK G+ + + D++ G P + L+ + G + + N
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM------NILGKVGRVEELTNV 360
Query: 75 MIQLGGYK--PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGL 132
++G ++ P + +N++ +AL SK ++ + F + + + Y L
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFE-----SKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 133 IWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRI 192
I + + +++A + L EEM G S++ A K E A + +L
Sbjct: 416 IDGYCKTNRVEKALL--LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 193 DGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLS 252
G ++ + ++ F K G+ +++++F EMK + V Y+ ++ + +A ++ +
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 253 ESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDS 311
SL+++ E+G + + S + ++N + + + +F +P+ YN L
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 312 LVKVGNLDKA 321
G ++A
Sbjct: 594 FAHAGMFEEA 603
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 151/380 (39%), Gaps = 53/380 (13%)
Query: 12 ALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSI 71
A+ ++L +G+ +K +F + P+ ST++ +++ + +G ++ +
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ---EGQHEKVHEV 219
Query: 72 YNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGG 131
Y M G P +++L + + S A +F + + ++ + IY
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDS------AIRLFDEMKDNCMQPTEKIYTT 273
Query: 132 LIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLR 191
L+ ++ +++A L EEMK AG +++ K G V+EA + +LR
Sbjct: 274 LLGIYFKVGKVEKA--LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR 331
Query: 192 IDGGPPTQAFVYR-MEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVL------- 243
DG P F+ M + KVG + +F EM + +V Y+ +I+ L
Sbjct: 332 -DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 244 -----------------------------CRAQEMDLSESLMQEFIESGMKPLMPSFSEL 274
C+ ++ + L++E E G P ++ L
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 275 MNLYLNLNLHDKLESVFSACLKKCRPNRT--IYNMYLDSLVKVGNLDKAEEIFTHICSGE 332
+N ++ +F LK+ N + +Y + + K G L +A ++F + +
Sbjct: 451 INALGKAKRYEAANELFKE-LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM-KNQ 508
Query: 333 GVGVTGRSCNIILSAYLSSG 352
G G + N ++S + +G
Sbjct: 509 GSGPDVYAYNALMSGMVKAG 528
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 133/295 (45%), Gaps = 10/295 (3%)
Query: 68 ACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKH 127
A I+N + + Y+PR + LF+ L + + QA +F +++ GL+
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVL------GNCKQPDQASLLFEVMLSEGLKPTID 180
Query: 128 IYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWL 187
+Y LI ++ + +D+A ++L ++ + ++ C K G + ++ L
Sbjct: 181 VYTSLISVYGKSELLDKA-FSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVL 239
Query: 188 KLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSV-SVTGYHKIIEVLCRA 246
++ + G T + ++ + K G + + +M E S+ V + II
Sbjct: 240 EMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNG 299
Query: 247 QEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRTI-Y 305
+ M ES F G++P + +F+ L+ + ++ K+ SV K+ T+ Y
Sbjct: 300 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 306 NMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENV 360
N+ +++ K G ++K +++F + +GV + +++AY +G VK ++V
Sbjct: 360 NIVIETFGKAGRIEKMDDVFRKM-KYQGVKPNSITYCSLVNAYSKAGLVVKIDSV 413
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 138/335 (41%), Gaps = 27/335 (8%)
Query: 3 QQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQ 62
+QHWY TKL +G + + LF+ ++++G P+ + L+ Y + +
Sbjct: 136 KQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSEL- 194
Query: 63 GCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGL 122
LD+A S M + KP + L K F +LV S +
Sbjct: 195 --LDKAFSTLEYMKSVSDCKPDVFTFTVLISCCC-----------KLGRF---DLVKS-I 237
Query: 123 EIQKHIYGGLIWLHSYQDNIDRARIASLREEMK--LAGIEEGRD------VLLSILRACS 174
++ G +Y ID A + EEM+ LA + E D L SI+ +
Sbjct: 238 VLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 297
Query: 175 KDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVT 234
++ + E+ + + + P F + F K G + K + M++R S++
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 235 GYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSAC 294
Y+ +IE +A ++ + + ++ G+KP ++ L+N Y L K++SV
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 295 LKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
+ + +N +++ + G+L +E++ +
Sbjct: 418 VNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 146/378 (38%), Gaps = 64/378 (16%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L + K K ++L ++ N+G P ++ ++ + G + E + R
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV---GLVKEGRELAER-- 241
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLH 136
++P +S++N+L L K D K A + +V G+ Y LI +
Sbjct: 242 ----FEPVVSVYNALINGL-CKEHD-----YKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG-G 195
I+ A S +M G L S+++ C G +A W +++R G
Sbjct: 292 CNSGQIELA--FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKE------------------RLGSV------ 231
P A+ ++ F G +K++ +F M+E + GS+
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 232 -----------SVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLN 280
+V Y ++E LCR + +ESL++ + P +P+F+ + +
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 469
Query: 281 LNLHDKLESVFSACLK--KCRPNRTIYNMYLDSLVKVGNLDKA----EEIFTHICSGEGV 334
D E VF + +C PN YN LD L K +++A EIF GV
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR-----GV 524
Query: 335 GVTGRSCNIILSAYLSSG 352
+ + N +L ++G
Sbjct: 525 EWSSSTYNTLLHGSCNAG 542
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 130/311 (41%), Gaps = 21/311 (6%)
Query: 21 MGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGG 80
+ +G+ + L + QG SE F ++ Y G + A ++ R+ + G
Sbjct: 86 LAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQV---GLAERAVEMFYRIKEFG- 141
Query: 81 YKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQD 140
P + ++N + L+ + ++ ++ ++ G E Y L+ +
Sbjct: 142 CDPSVKIYNHVLDTLL------GENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 141 NIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQA 200
+D A+ L EM G +++ + + G V+E + P
Sbjct: 196 KVDGAK--KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSV 248
Query: 201 FVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFI 260
+ + K ++ + E+ REM E+ S +V Y +I VLC + +++L+ S + + +
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
Query: 261 ESGMKPLMPSFSELM-NLYLNLNLHDKLESVFSACLK--KCRPNRTIYNMYLDSLVKVGN 317
+ G P + + S L+ +L D L+ +++ ++ +PN YN + GN
Sbjct: 309 KRGCHPNIYTLSSLVKGCFLRGTTFDALD-LWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 318 LDKAEEIFTHI 328
+ KA +F+H+
Sbjct: 368 IVKAVSVFSHM 378
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 146/340 (42%), Gaps = 23/340 (6%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M+ R + + L + G+++ +L D+I + P+ TF+ L+ A++
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK--- 266
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+G EA +++ MI+ P + +NSL L +A+ +F +V+
Sbjct: 267 EGKFVEAEKLHDDMIK-RSIDPDIFTYNSLINGFCMHDR------LDKAKQMFEFMVSKD 319
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
Y LI ++ L EM G+ ++++ DGD +
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDG--TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 182 AEATWLKLLRIDGGPP-TQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKII 240
A+ + +++ DG PP + ++ G+ K+LE+F M++ + + Y +I
Sbjct: 378 AQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Query: 241 EVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCR- 299
E +C+A ++D L G+KP + +++ +++ + L L+ + A LKK +
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL---LQEAY-ALLKKMKE 492
Query: 300 ----PNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVG 335
P+ YN + + ++ G+ + E+ + S VG
Sbjct: 493 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 532
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 158/371 (42%), Gaps = 23/371 (6%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK 82
K G + ++ + G VP TF IL Y S + A +Y + G K
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKA---EAALGVYETAVD-SGVK 351
Query: 83 PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNI 142
+ L AL + +++AE I + GL + IY +I + + ++
Sbjct: 352 MNAYTCSILLNALCKEGK------IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 143 DRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFV 202
AR+ E M+ G++ ++R + G++E AE K+ P + +
Sbjct: 406 VGARMKI--EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Query: 203 YRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIES 262
+ + + E K +I +EM++ +V Y +I LC+ ++ ++ + ++ +
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 523
Query: 263 GMKPLMPSFSELMNLYLNLNLHDKLESVF---SACLKK-CRPNRTIYNMYLDSLVKVGNL 318
G+ P + ++ L++ + K+E F LKK N YN +D L G L
Sbjct: 524 GVSPKVRIYNMLIDGCCS---KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 319 DKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDIEPSLMQK 378
+AE++ I S +G+ + N ++S Y +G + +Y M K+ I+P+L +
Sbjct: 581 SEAEDLLLEI-SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM--KRSGIKPTL-KT 636
Query: 379 LDYVLSLSRKE 389
++SL KE
Sbjct: 637 YHLLISLCTKE 647
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 125/310 (40%), Gaps = 18/310 (5%)
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
G +D+A ++N + + G + + ++NSL AL + A + ++ G
Sbjct: 159 NGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALC------DVKMFHGAYALIRRMIRKG 212
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIE---EGRDVLL-SILRACSKDG 177
L+ K Y L+ + A+ +EM G GRD+L+ +L A G
Sbjct: 213 LKPDKRTYAILVNGWCSAGKMKEAQ--EFLDEMSRRGFNPPARGRDLLIEGLLNA----G 266
Query: 178 DVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYH 237
+E A+ K+ + P Q F +E +K GE +E++ + V + Y
Sbjct: 267 YLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYK 326
Query: 238 KIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSAC-LK 296
+I + + ++D + L+ +E G KP ++ ++ + D S FS +K
Sbjct: 327 TLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Query: 297 KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVK 356
PNR +Y M + + G A + + G+ R +++ + G+H
Sbjct: 387 AHPPNRPVYTMLITMCGRGGKFVDAANYLVEM-TEMGLVPISRCFDMVTDGLKNGGKHDL 445
Query: 357 AENVYNLMCQ 366
A + L Q
Sbjct: 446 AMRIEQLEVQ 455
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M+ + + + +L D MG+ + + + ++ D+I G P+ ST+ LV AY A
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVT-S 120
D+A +IY M + G LSL L+ L++ AD RY+ +A IF ++
Sbjct: 366 G---DDALAIYREMKEKG-----LSLTVILYNTLLSMCAD--NRYVDEAFEIFQDMKNCE 415
Query: 121 GLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
+ + LI +++ + A A L +M+ AG E VL S+++ K V+
Sbjct: 416 TCDPDSWTFSSLITVYACSGRVSEAEAALL--QMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 181 EAEATWLKLLRIDGGP 196
+ T+ ++L + P
Sbjct: 474 DVVRTFDQVLELGITP 489
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 47/315 (14%)
Query: 3 QQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQ 62
+Q Y+ DFA A + + G F +L + + +QGR PSE F IL+ + A +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILI--RMHADNR 207
Query: 63 GCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKP---------ADTSKRYLKQAEFI 113
L +Y +M + G+KPR+ L+N + ALV D + L +
Sbjct: 208 RGL-RVYYVYEKMKKF-GFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTT 265
Query: 114 FHNLVTS---------GLEIQKHI-----------YGGLIWLHSYQDNIDRARIASLR-- 151
F LV LEI + + Y +I + N+D ASLR
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLD----ASLRVW 321
Query: 152 EEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKL----LRIDGGPPTQAFVYRMEV 207
+EM+ I+ +++ KDG VE ++++ + ID + + +E
Sbjct: 322 DEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILID----REIYRVLIEG 377
Query: 208 FAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPL 267
F G+ + ++ ++ + + Y+ +I+ LC ++D + L Q IE ++P
Sbjct: 378 FVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPD 437
Query: 268 MPSFSELMNLYLNLN 282
+ S +M Y+ +N
Sbjct: 438 FETLSPIMVAYVVMN 452
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 153/380 (40%), Gaps = 51/380 (13%)
Query: 4 QHWYRF---DFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
Q+W+ F DF + L GK G F + + G P+ ++ L+ +Y
Sbjct: 132 QNWWNFSEIDFLM---LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRG- 187
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLV-- 118
G + A +I+ RM Q G +P + + + V K+AE +F L+
Sbjct: 188 --GKCNNAEAIFRRM-QSSGPEPSAITYQIILKTFVEGDK------FKEAEEVFETLLDE 238
Query: 119 -TSGLEIQKHIYGGLIWLHSYQDNIDRAR------------------------------I 147
S L+ + +Y +I+++ N ++AR +
Sbjct: 239 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV 298
Query: 148 ASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEV 207
+ + ++M+ + I+ +++A + EEA + + ++L P +A+ ++
Sbjct: 299 SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 358
Query: 208 FAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPL 267
FA G ++ +F+ M+ + Y ++ A +M+ +E + G +P
Sbjct: 359 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 418
Query: 268 MPSFSELMNLYLNLNLHDKLESVFSAC-LKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFT 326
+ ++ L+ Y N +K+ V+ L + N+TI +D+ + N A +
Sbjct: 419 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYK 478
Query: 327 HICSGEGVGVTGRSCNIILS 346
+ S GV ++ N++LS
Sbjct: 479 EMESC-GVPPDQKAKNVLLS 497
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 146/336 (43%), Gaps = 20/336 (5%)
Query: 33 LFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK--PRLSLHNS 90
+++ I++ P+E T I++ +G L E + +R+ G + P + ++ S
Sbjct: 221 IYECAIDKRIYPNEITIRIMIQVLCK---EGRLKEVVDLLDRIC---GKRCLPSVIVNTS 274
Query: 91 L-FRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIAS 149
L FR L + S LK+ + N+V + Y +++ + + ++ AR
Sbjct: 275 LVFRVLEEMRIEESMSLLKR--LLMKNMVVDTIG-----YSIVVYAKAKEGDLVSAR--K 325
Query: 150 LREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFA 209
+ +EM G V +R C + GDV+EAE ++ P + F + FA
Sbjct: 326 VFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFA 385
Query: 210 KVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMP 269
+ G K LE M R S + ++++++ + + + ++ + ++ + I+ G P
Sbjct: 386 RFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEH 445
Query: 270 SFSELMNLYLNLNLHDK-LESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
++S L+ ++ N D+ L+ + +K P ++ + L G ++ E+ + I
Sbjct: 446 TYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEK-YLKI 504
Query: 329 CSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLM 364
+ + ++ A+ G+ A+ VYN M
Sbjct: 505 MKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 12/259 (4%)
Query: 24 EGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKP 83
E K L +I +G V T++IL+ Y G +A ++++ M+ G +P
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ---HGDAKKAFALHDEMMT-DGIQP 430
Query: 84 RLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNID 143
+ SL L K ++A+ +F +V G++ + L+ H N+D
Sbjct: 431 TQFTYTSLIYVLC------RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 144 RARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVY 203
RA SL +EM + I ++R +G EEA ++ R P ++
Sbjct: 485 RA--FSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 542
Query: 204 RMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESG 263
+ ++K G+ + + EM + ++ Y+ +++ L + QE +L+E L++E G
Sbjct: 543 LISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Query: 264 MKPLMPSFSELMNLYLNLN 282
+ P SF ++ NL+
Sbjct: 603 IVPNDSSFCSVIEAMSNLD 621
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 137/310 (44%), Gaps = 14/310 (4%)
Query: 65 LDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEI 124
++EA S+ N+M+++G KP + ++ ++ +L ++ A +F + G+
Sbjct: 158 MEEAMSMVNQMVEMG-IKPDVVMYTTIIDSL------CKNGHVNYALSLFDQMENYGIRP 210
Query: 125 QKHIYGGLIWLHSYQDNIDRARIA-SLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAE 183
+Y L+ + N R R A SL M I+ +++ A K+G +AE
Sbjct: 211 DVVMYTSLV---NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 184 ATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVL 243
+ +++R+ P + + F G ++ ++F M+ + V Y +I
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 244 CRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNR 302
C+ +++D + + E + G+ +++ L+ + + + + VFS + + PN
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Query: 303 TIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGR--SCNIILSAYLSSGEHVKAENV 360
YN+ L L G + KA IF + E GV + N++L +G+ KA V
Sbjct: 388 RTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMV 447
Query: 361 YNLMCQKKYD 370
+ M +++ D
Sbjct: 448 FEDMRKREMD 457
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 153/380 (40%), Gaps = 51/380 (13%)
Query: 4 QHWYRF---DFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAP 60
Q+W+ F DF + L GK G F + + G P+ ++ L+ +Y
Sbjct: 139 QNWWNFSEIDFLM---LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRG- 194
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLV-- 118
G + A +I+ RM Q G +P + + + V K+AE +F L+
Sbjct: 195 --GKCNNAEAIFRRM-QSSGPEPSAITYQIILKTFVEGDK------FKEAEEVFETLLDE 245
Query: 119 -TSGLEIQKHIYGGLIWLHSYQDNIDRAR------------------------------I 147
S L+ + +Y +I+++ N ++AR +
Sbjct: 246 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV 305
Query: 148 ASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEV 207
+ + ++M+ + I+ +++A + EEA + + ++L P +A+ ++
Sbjct: 306 SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDA 365
Query: 208 FAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPL 267
FA G ++ +F+ M+ + Y ++ A +M+ +E + G +P
Sbjct: 366 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 425
Query: 268 MPSFSELMNLYLNLNLHDKLESVFSAC-LKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFT 326
+ ++ L+ Y N +K+ V+ L + N+TI +D+ + N A +
Sbjct: 426 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYK 485
Query: 327 HICSGEGVGVTGRSCNIILS 346
+ S GV ++ N++LS
Sbjct: 486 EMESC-GVPPDQKAKNVLLS 504
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 176 DGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTG 235
+G V +A +++ P + + V K G+ ++E+ R+M+ER +
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 236 YHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACL 295
Y II+ LC+ +D + +L E G K + +++ L+ + N D + +
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 296 K-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEH 354
K K PN +++ +DS VK G L +A+++ + G+ + N ++ +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFCKENRL 384
Query: 355 VKAENVYNLMCQKKYDIEPSLM 376
+A + +LM K D P +M
Sbjct: 385 EEAIQMVDLMISKGCD--PDIM 404
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 21/311 (6%)
Query: 63 GCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPA-DTSKRYLKQA--EFIFHNLVT 119
G LD A +++N M ++ G+K + +N+L D + L+ I N+VT
Sbjct: 277 GSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 120 SGLEIQKHIYGGLIWLHSYQDNIDRARIAS-LREEMKLAGIEEGRDVLLSILRACSKDGD 178
+ I + G + R A L +EM GI S++ K+
Sbjct: 336 FSVLIDSFVKEG------------KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 179 VEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHK 238
+EEA ++ P F + + K LE+FREM R + Y+
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 239 IIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMN-LYLNLNLHDKLESVFSACLK- 296
+++ C++ ++++++ L QE + ++P + S+ L++ L N L LE +F K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE-IFGKIEKS 502
Query: 297 KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVK 356
K + IY + + + +D A ++F + +GV + R+ NI++S K
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 357 AENVYNLMCQK 367
A+ ++ M ++
Sbjct: 562 ADILFRKMTEE 572
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/378 (18%), Positives = 150/378 (39%), Gaps = 51/378 (13%)
Query: 13 LSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIY 72
+++ + D G+F++ +L+ ++ + G V F I+V Y+ A G L+EACS+
Sbjct: 560 ITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKA---GSLEEACSVL 616
Query: 73 NRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGL 132
M + P + L + R
Sbjct: 617 EIMDEQKDIVPDVYLFRDMLRI-------------------------------------- 638
Query: 133 IWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRI 192
YQ + ++ L ++ +GI +++ ++ C++ ++E T+ +++R
Sbjct: 639 -----YQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRY 693
Query: 193 DGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLS 252
P T F ++V+ K K E+F + +R G V V Y+ II + ++
Sbjct: 694 GFTPNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRHGVVDVISYNTIIAAYGKNKDYTNM 752
Query: 253 ESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCR-PNRTIYNMYLDS 311
S ++ G + +++ L++ Y +K S+ K P+ YN+ ++
Sbjct: 753 SSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 312 LVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDI 371
+ G +D+ ++ + G+G S N ++ AY G +A + M + +I
Sbjct: 813 YGEQGWIDEVADVLKEL-KESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM--RGRNI 869
Query: 372 EPSLMQKLDYVLSLSRKE 389
P + + V +L R +
Sbjct: 870 IPDKVTYTNLVTALRRND 887
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 151/354 (42%), Gaps = 14/354 (3%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK 82
K GK+ + +E+F +++ G P +T+ L+ + A +G + E +++ M +
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLL---MEACKKGDVVETEKVFSDM-RSRDVV 372
Query: 83 PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNI 142
P L +S+ +L T+ + L +A F+++ +GL IY LI + + I
Sbjct: 373 PDLVCFSSMM-SLFTRSGN-----LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 143 DRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFV 202
A +LR EM G +IL K + EA+ + ++ P +
Sbjct: 427 SVA--MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 203 YRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIES 262
++ K+G ++E+F++MKE+ + V Y+ +++ + ++D ++ + + +
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 263 GMKPLMPSFSELMN-LYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKA 321
+ P S+S L+N L +L + K +P I N + + GN
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 322 EEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDIEPSL 375
E + S EG S N ++ ++ KA + M +++ + P +
Sbjct: 605 ESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 10/226 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M++ R D L D GK G +E++ D++++ +P+ ++ ILV A S
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS--- 562
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+G L EA +++ MI KP + + NS+ + + + S E +++ G
Sbjct: 563 KGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYC-RSGNAS-----DGESFLEKMISEG 615
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
Y LI+ ++N+ +A + E + G+ SIL + ++E
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKER 227
AE K++ P + + F ++ I EM +R
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 129/305 (42%), Gaps = 30/305 (9%)
Query: 49 FHILVIAYLSAPVQGCLDE-ACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKR-Y 106
+ + +A+ +GC D+ +C + MI + G + ++ L R + DT K +
Sbjct: 137 WRLAFLAFKWGEKRGCDDQKSCDL---MIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMF 193
Query: 107 LKQAEFIFHNLVTSGLEIQ------KHI-----YGGLIWLHSYQDNIDRARIASLREEMK 155
L + N + + KH + GL+ +I++A L +
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL 253
Query: 156 LAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHM 215
EG +V+L+ C+ DV EA+ W ++ P ++ + + F+KVG
Sbjct: 254 FPVDVEGFNVILN--GWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 216 KSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELM 275
SL ++ EMK+R + + Y+ ++ VL R D + LM++ E G+KP +++ ++
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 276 NLYLNLNLHDKLESVFSACL-KKCRPNRTIYNMYLDSL-----------VKVGNLDKAEE 323
D +V + + + P ++ +L+++ +K+ +L EE
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEE 431
Query: 324 IFTHI 328
F I
Sbjct: 432 TFLLI 436
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 137/329 (41%), Gaps = 15/329 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M + Y+ D T L + K ++ L D ++ +G P T+ +V
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK--- 235
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+G +D A S+ +M + G + + ++N++ L +++ A +F + G
Sbjct: 236 RGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLC------KYKHMDDALNLFTEMDNKG 288
Query: 122 LEIQKHIYGGLI-WLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
+ Y LI L +Y D +R+ S E K I +++ A K+G +
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKLV 345
Query: 181 EAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKII 240
EAE + ++++ P + + F ++ +F M + +V Y +I
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 241 EVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCR 299
+ C+A+ ++ L +E + G+ +++ L++ + D + VF +
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 300 PNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
PN YN+ LD L K G L KA +F ++
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 136/364 (37%), Gaps = 50/364 (13%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M + Y D L + + + L D ++ G P TF L+ +
Sbjct: 744 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF---L 800
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
EA ++ +RM+Q G +P L + ++ L K DT A + + + +
Sbjct: 801 HNKASEAVALIDRMVQ-RGCQPDLVTYGAVVNGLC-KRGDTD-----LALNLLNKMEAAK 853
Query: 122 LEIQKHIYGGLI-WLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
+E IY +I L Y+ D +L EM+ G+ S++ G
Sbjct: 854 IEANVVIYSTVIDSLCKYRHEDDAL---NLFTEMENKGVRPNVITYSSLISCLCNYGRWS 910
Query: 181 EAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREM---------------- 224
+A ++ P F ++ F K G+ +K+ +++ EM
Sbjct: 911 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 970
Query: 225 -----KERLGSV--------------SVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMK 265
+RLG +V Y+ +I C+A+ +D L +E + G+
Sbjct: 971 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 1030
Query: 266 PLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEI 324
+++ L++ + D + VF + PN YN+ LD L K G L KA +
Sbjct: 1031 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 1090
Query: 325 FTHI 328
F ++
Sbjct: 1091 FEYL 1094
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/274 (18%), Positives = 117/274 (42%), Gaps = 10/274 (3%)
Query: 65 LDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEI 124
+ +A ++ ++M+++G YKP +L L + +A + +V G +
Sbjct: 769 ISDAVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKAS------EAVALIDRMVQRGCQP 821
Query: 125 QKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEA 184
YG ++ + + D A +L +M+ A IE + +++ + K ++A
Sbjct: 822 DLVTYGAVVNGLCKRGDTDLA--LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 879
Query: 185 TWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLC 244
+ ++ P + + G + + +M ER + ++ + +I+
Sbjct: 880 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 939
Query: 245 RAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRT 303
+ ++ +E L +E I+ + P + ++S L+N + L+ + + + ++K C PN
Sbjct: 940 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 999
Query: 304 IYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVT 337
YN ++ K +DK E+F + VG T
Sbjct: 1000 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 1033
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 12/261 (4%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
+ L D KEGK + +L+D++I + P T+ L+ + + LDEA ++
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC---MHDRLDEAKHMFEL 388
Query: 75 MIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIW 134
MI + P + +++L + +KR + E +F + GL Y LI
Sbjct: 389 MISKDCF-PNVVTYSTLIKGFCK-----AKRVEEGME-LFREMSQRGLVGNTVTYTTLIH 441
Query: 135 LHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG 194
+ D A++ + ++M G+ +L K+G + +A + L R
Sbjct: 442 GFFQARDCDNAQM--VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 195 GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSES 254
P + +E K G+ E+F + + S +V Y+ +I CR + ++S
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 255 LMQEFIESGMKPLMPSFSELM 275
L+++ E G P +++ L+
Sbjct: 560 LLKKMKEDGPLPNSGTYNTLI 580
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Query: 150 LREEMKLAGIEEGRDVLLSI-LRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVF 208
+R MK GI LL+I + + K ++E AE + +R+ P + ++ +
Sbjct: 2 VRGLMKFPGISTK---LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGY 58
Query: 209 AKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLM 268
+ ++ + R M+E VT Y+ +I + ++ L E + SG+ P M
Sbjct: 59 TRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDM 118
Query: 269 PSFSELMNLYLNLNLHDKLESVF--SACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFT 326
S++ LM+ Y L H + + L P YN+ LD+L K G+ D A E+F
Sbjct: 119 WSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK 178
Query: 327 HI 328
H+
Sbjct: 179 HL 180
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 30/307 (9%)
Query: 32 ELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSL 91
+LFD++++ G P +++ L+ Y G EA I + I L G P + +N L
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG---EAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 92 FRALV----TKPADTSKRYLK---QAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDR 144
AL T A ++LK + E + +N++ +GL + + G + W+
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRV-GSVDWMM-------- 211
Query: 145 ARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYR 204
E+K +G ++L+ K +E+ +LK+ + A
Sbjct: 212 -------RELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAV 264
Query: 205 MEVFAKVGEHMKSLEIFREM-KERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESG 263
+ K G ++ E E+ + S + Y+ ++ + + +D + L++E G
Sbjct: 265 VSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKG 324
Query: 264 MKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK--CRPNRTIYNMYLDSLVKVGNLDKA 321
+KP + + ++N LN+ E AC+ + +P+ N +D L K G++D+A
Sbjct: 325 LKPDDYTHTIIVNGLLNIGNTGGAEKHL-ACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 322 EEIFTHI 328
+F +
Sbjct: 384 MRLFASM 390
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 8/204 (3%)
Query: 158 GIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKS 217
G+E+ + + +L K+ VE+A L+L + P F + + K ++
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 218 LEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNL 277
L +EMK V Y II C+ E ++ E +G P +++ +M+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS- 302
Query: 278 YLNLNLHDKLESVFSACLKK----CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEG 333
+LN + E + C+P+ YN + +L + G L++AE +F G
Sbjct: 303 --SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 334 VGVTGRSCNIILSAYLSSGEHVKA 357
V + + N +++ Y E KA
Sbjct: 361 VSINTSTYNSMIAMYCHHDEEDKA 384
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 8/204 (3%)
Query: 158 GIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKS 217
G+E+ + + +L K+ VE+A L+L + P F + + K ++
Sbjct: 185 GLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEA 243
Query: 218 LEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNL 277
L +EMK V Y II C+ E ++ E +G P +++ +M+
Sbjct: 244 LWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS- 302
Query: 278 YLNLNLHDKLESVFSACLKK----CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEG 333
+LN + E + C+P+ YN + +L + G L++AE +F G
Sbjct: 303 --SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELG 360
Query: 334 VGVTGRSCNIILSAYLSSGEHVKA 357
V + + N +++ Y E KA
Sbjct: 361 VSINTSTYNSMIAMYCHHDEEDKA 384
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 139/319 (43%), Gaps = 24/319 (7%)
Query: 38 INQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVT 97
+ +G++ ++ + +I L +++A +++ M G +P + +NSL R L
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKN--VNDALNLFTEMDN-KGIRPNVVTYNSLIRCLCN 302
Query: 98 --KPADTSKRYLKQAEF-IFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREEM 154
+ +D S+ E I N+VT I + G + L +EM
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL-----------VEAEKLYDEM 351
Query: 155 KLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEH 214
I+ S++ ++EA+ + ++ D P + ++ F K
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411
Query: 215 MKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSEL 274
+ +E+FREM +R + Y+ +I+ L +A + D+++ + ++ + G+ P + ++S L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 275 MNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEG 333
++ +K VF K K P+ YN+ ++ + K G ++ ++F CS
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF---CS--- 525
Query: 334 VGVTGRSCNIILSAYLSSG 352
+ + G N+I+ + SG
Sbjct: 526 LSLKGVKPNVIIYTTMISG 544
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 136/313 (43%), Gaps = 15/313 (4%)
Query: 25 GKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPR 84
G+++ L D+I + P+ TF L+ A++ +G L EA +Y+ MI+ P
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIK-RSIDPD 359
Query: 85 LSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDR 144
+ ++SL L +A+ +F +++ Y LI ++
Sbjct: 360 IFTYSSLINGFCMHDR------LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 145 ARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPP-TQAFVY 203
L EM G+ ++++ + GD + A+ + K++ DG PP +
Sbjct: 414 G--MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITYSI 470
Query: 204 RMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESG 263
++ K G+ K+L +F +++ + Y+ +IE +C+A +++ L G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 264 MKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAE 322
+KP + ++ +++ + L ++ +++F + PN YN + + ++ G+ +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 323 EIFTHICSGEGVG 335
E+ + S VG
Sbjct: 591 ELIKEMRSCGFVG 603
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 12/209 (5%)
Query: 159 IEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSL 218
+EEG +I+ K GD E A K+ + ++ K G H+ +
Sbjct: 37 VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQ 96
Query: 219 EIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLY 278
+F EM ++ V Y +I+ CR+ +E L+++ IE + P + +FS L+N
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 279 LNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVT 337
+ + E ++ L++ P YN +D K L+ A+ + + S
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS------- 209
Query: 338 GRSC--NIILSAYLSSGEHVKAENVYNLM 364
+SC +++ + L +G + KA+ V N M
Sbjct: 210 -KSCSPDVVTFSTLING-YCKAKRVDNGM 236
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 129/299 (43%), Gaps = 25/299 (8%)
Query: 12 ALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSI 71
AL T L + G++ L D++ + P+ TF L+ A++ G L EA +
Sbjct: 228 ALVTGLCEI----GRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV---GKLMEAKEL 280
Query: 72 YNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGG 131
YN MIQ+ Y P + + SL L L +A +F+ + +G + IY
Sbjct: 281 YNVMIQMSVY-PDVFTYGSLINGLCMYG------LLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 132 LIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLR 191
LI H + + + EM G+ +++ G + A+ + ++
Sbjct: 334 LI--HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 192 IDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDL 251
P + + ++ G+ K+L IF M++R +++ Y II+ +C+ +++
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 252 SESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCR-----PNRTIY 305
+ L GMKP + +++ +++ + L + +S+F KK + PN ++Y
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF----KKMKEDGFLPNESVY 506
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 169 ILRACSKDGDVEEAEATWLKL---LRIDGGPPTQ------AFVYRMEVFAKVGEHMKSLE 219
+L A S++G +EA LKL ++ + PP F + + G+ +++E
Sbjct: 316 VLEALSENGKFDEA----LKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 220 IFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYL 279
+FR+M + S ++ ++ LC + + +E L E E +KP ++ LM+
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 280 NLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICS 330
D+ + + ++ RPN +YN D L+K G LD A+ F + S
Sbjct: 432 KEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS 483
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 218 LEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNL 277
LEIFR M + ++V ++E LCR E++ S+ L++EF G+KP +++ ++N
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 278 YLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
Y+ +E V K N+ Y + ++ VK G + AE++F +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 139/364 (38%), Gaps = 65/364 (17%)
Query: 26 KFAKCRELFDDIINQG--RVPSESTFHILVIAYLSAPV-----------------QGCLD 66
+F + R L + ++N G + P E +V +S G +
Sbjct: 112 RFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFE 171
Query: 67 EACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQK 126
E +++ M++ G LS+ +V A +R + IF +V SG++I
Sbjct: 172 EGLRVFDYMVKKG-----LSIDER--SCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT- 223
Query: 127 HIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATW 186
+Y I + + + L +E + GI+ +I+ A K D E
Sbjct: 224 -VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGV- 281
Query: 187 LKLLRIDGGPPTQ-AFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCR 245
LK+++ DG + + ME+ K G+ + ++F EM+ER V Y +I CR
Sbjct: 282 LKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCR 341
Query: 246 AQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRTIY 305
M + L E E G+ P S++ Y
Sbjct: 342 KGNMKRAFLLFDELTEKGLSP--SSYT--------------------------------Y 367
Query: 306 NMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMC 365
+D + KVG + AE + + S +GV +T N ++ Y G +A +Y++M
Sbjct: 368 GALIDGVCKVGEMGAAEILMNEMQS-KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 366 QKKY 369
QK +
Sbjct: 427 QKGF 430
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLG-SVSVTGYHKIIEVLCRAQEMDLSES 254
P F + AK+ ++ + +FR + E LG S + + +I+ CR + L+ S
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 255 LMQEFIESGMKPLMPSFSELMNLYLNLN-LHDKLESVFSACLKKCRPNRTIYNMYLDSLV 313
+ + ++ G +P + +F L+N + ++N ++ + V PN IYN +DSL
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 314 KVGNLDKAEEIFTHI 328
+ G ++ A ++ H+
Sbjct: 196 EKGQVNTALDVLKHM 210
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 38/302 (12%)
Query: 44 PSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTS 103
PS TF I+ Y SA G D+A ++ M + G ++ L+ N++ L S
Sbjct: 124 PSPKTFAIVAERYASA---GKPDKAVKLFLNMHEHGCFQD-LASFNTILDVLCK-----S 174
Query: 104 KRYLKQAEF------------IFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLR 151
KR K E + +N++ +G + K L L
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVL---------------- 218
Query: 152 EEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKV 211
+EM GI ++L+ + G + A +L++ + D + + F
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 212 GEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSF 271
GE ++ +F EM SV Y+ +I+VLC+ ++ + + +E + G +P + ++
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 272 SELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICS 330
+ L+ + + E + + C PN YNM + + ++KA +F + S
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 331 GE 332
G+
Sbjct: 399 GD 400
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 132/329 (40%), Gaps = 18/329 (5%)
Query: 41 GRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK--PRLSLHNSLFRALVTK 98
G P+ ST++ L+ Y + G + + + + M++ G P + N L +A
Sbjct: 145 GLNPTTSTYNTLIKGY---GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWC-- 199
Query: 99 PADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDRARIASLREE-MKLA 157
K+ +++A + + G+ Y + + + RA + + MK
Sbjct: 200 ----KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Query: 158 GIEEGRDVLLSILRACSKDGDVEEAE--ATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHM 215
GR + + C ++G V + +K +R++ F + F +V +
Sbjct: 256 AKPNGRTCGIVVGGYC-REGRVRDGLRFVRRMKEMRVEAN--LVVFNSLINGFVEVMDRD 312
Query: 216 KSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELM 275
E+ MKE V Y ++ A M+ + + +E +++G+KP ++S L
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 276 NLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVG 335
Y+ K E + + + RPN I+ + G++D A +F +C GV
Sbjct: 373 KGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF-GVS 431
Query: 336 VTGRSCNIILSAYLSSGEHVKAENVYNLM 364
++ ++ YL + KAE V +M
Sbjct: 432 PNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 141/351 (40%), Gaps = 56/351 (15%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK 82
K+G F + D+++N G P+ ST++I + A G +D+A + + M
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF---GRIDDARELLSSMAA----- 371
Query: 83 PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNI 142
P + +N+L + +A +F +L + Y LI N+
Sbjct: 372 PDVVSYNTLMHGYIKMGK------FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 143 DRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFV 202
+ A+ L+EEM I ++++ K+G++ A + ++LR P A+
Sbjct: 426 EGAQ--RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 203 YRMEVFAKVGEHMKSLEIFREM-KERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIE 261
R ++G+ K+ + EM + +T Y+ I+ LC+ + + ++
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 262 SGMKPLMPSFSELMNLYLN-------LNLHD-------------------------KLES 289
G+ P +++ ++ YL NL+D +LE
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 290 VF--SACLKK--CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGV 336
F S +KK RPN +N L + K GN+D+A + ++C E G+
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA---YRYLCKMEEEGI 651
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 94/214 (43%), Gaps = 11/214 (5%)
Query: 164 DVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFRE 223
+++L +LR + +A A + ++ P F ++ K G+ + +I+ E
Sbjct: 207 NIVLKVLRDSRM---MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE 263
Query: 224 MKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNL 283
MK R S Y+ +I + +M+ + + SG SF+ L+ Y L
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 284 HDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCN 342
D V L P + YN+Y+ +L G +D A E+ + + + + V S N
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV-----SYN 378
Query: 343 IILSAYLSSGEHVKAENVYNLMCQKKYDIEPSLM 376
++ Y+ G+ V+A +++ + + DI PS++
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDL--RAGDIHPSIV 410
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 153 EMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG-GPPTQAFVYRMEVFAKV 211
+M G G V ++ ACSK GD++EA+ LKL+ G P + + +AK
Sbjct: 898 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEV-LKLMESRGLKPDVYTYTVIISGYAKG 956
Query: 212 GEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSF 271
G ++ EI E K++ +S YH +I C+ +E D + L+ E G++P +
Sbjct: 957 GMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEY 1016
Query: 272 SELMNLY 278
++L+ +
Sbjct: 1017 NKLIQSF 1023
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 149/370 (40%), Gaps = 26/370 (7%)
Query: 10 DFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEAC 69
D L + K + R+++D++ ++G + ILV +G +E
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV--------KGMCNEGK 220
Query: 70 SIYNRMIQLG----GYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQ 125
R + G G P + +N++ K D YL +F L G
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGY-CKLGDIENAYL-----VFKELKLKGFMPT 274
Query: 126 KHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDG-DVEEAEA 184
+G +I + + D L E+K G+ L +I+ A + G V+ AE+
Sbjct: 275 LETFGTMI--NGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332
Query: 185 T-WLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVL 243
W+ + D P + + K G+ ++ E ++ + Y +I+
Sbjct: 333 IGWI--IANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390
Query: 244 CRAQEMDLSESLMQEFIESGMKPLMPSFSELMN-LYLNLNLHDKLESVFSACLKKCRPNR 302
C+++E D++ L+ + E G KP + ++ L++ L ++ ++ D + + P+
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450
Query: 303 TIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYN 362
IYNM + L K G A+ +F+ + + ++ ++ SG+ +A V++
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLD-RNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 363 LMCQKKYDIE 372
L +K ++
Sbjct: 510 LSVEKGVKVD 519
>AT1G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:408779-410433 FORWARD
Length = 524
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 204 RMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESG 263
++++ KV + E F ++ E V Y ++ RA+ + +E+L+ + G
Sbjct: 142 QLDLIGKVRGIPDAEEFFLQLPENFKDRRV--YGSLLNAYVRAKSREKAEALLNTMRDKG 199
Query: 264 --MKPLMPSFSELMNLYLNLNLHDKLES-VFSACLKKCRPNRTIYNMYLDSLVKVGNLDK 320
+ PL F+ +M LY+NL +DK+++ VF K R + YN++L S +G+++K
Sbjct: 200 YALHPL--PFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEK 257
Query: 321 AEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENV 360
E ++ + S + + + + + Y+ GE KAE+
Sbjct: 258 MELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDA 297
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 132/312 (42%), Gaps = 16/312 (5%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L + K+ ++ D+I + G VP+ T+ ++ Y++ +G ++ A + M+
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA---RGDMESAKRVLEEML 253
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLH 136
G Y P + + L +A + ++ + +E + YG +I
Sbjct: 254 DRGWY-PDATTYTVLMDGYC------KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGP 196
+ AR ++ +EM + ++ A +D V+EA W K+L+ + P
Sbjct: 307 CKEKKSGEAR--NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 197 PTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSV-SVTGYHKIIEVLCRAQEMDLSESL 255
+ K G ++ ++F E ++ GS+ S+ Y+ +I +C E+ + L
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEFEK--GSIPSLLTYNTLIAGMCEKGELTEAGRL 422
Query: 256 MQEFIESGMKPLMPSFSELM-NLYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVK 314
+ E KP +++ L+ L N N+ + + + C PN+T + + + L K
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Query: 315 VGNLDKAEEIFT 326
+G + A +I +
Sbjct: 483 LGKEEDAMKIVS 494
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 128/305 (41%), Gaps = 11/305 (3%)
Query: 65 LDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEI 124
+ +A ++ ++M+++G YKP +L L + +A + +V G +
Sbjct: 169 ISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKAS------EAVALVDQMVQRGCQP 221
Query: 125 QKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEA 184
YG ++ + +ID A +L +M+ A I+ + +I+ + K VE A
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLA--LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 185 TWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLC 244
+ ++ P + + G + + M E+ + +V ++ +I+
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 245 RAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRT 303
+ ++ +E L +E I+ + P +++ L+N + N D+ + +F + K C PN
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 304 IYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNL 363
YN ++ K ++ E+F + VG T II + +G+ A+ V+
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII-QGFFQAGDCDSAQMVFKQ 458
Query: 364 MCQKK 368
M +
Sbjct: 459 MVSNR 463
>AT1G76280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28617948-28622581 REVERSE
Length = 773
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 10/226 (4%)
Query: 146 RIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG------GPPTQ 199
RI ++ +M G + L++LRA +G V E K + G PT
Sbjct: 469 RINAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTY 528
Query: 200 AFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEF 259
V + + E + IF+ MK V Y+ +I+ + +L+
Sbjct: 529 NIV--LHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMM 586
Query: 260 IESGMKPLMPSFSELMNLYLN-LNLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGNL 318
I G P +F+ LM + LN N + L + A L++ + YN L + G +
Sbjct: 587 IRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMI 646
Query: 319 DKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLM 364
D E I + E V +C+ + S Y+ G H A N++
Sbjct: 647 DVIEYIVEQM-HREKVNPDPTTCHYVFSCYVEKGYHATAIEALNVL 691
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 14/245 (5%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYK 82
KE K + LF + QG P+ +T+ L+ + A G A + N M G+
Sbjct: 971 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKA---GSFGRAYELMNLMGD-EGFM 1026
Query: 83 PRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNI 142
P + +N+ +L K +A + + + GLE Y LI Q++I
Sbjct: 1027 PNIYTYNAAIDSLCKKSR------APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 1080
Query: 143 DRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFV 202
++A R M G E + ++ A + ++E+E + ++ + P + +
Sbjct: 1081 NQALAFFCR--MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 1138
Query: 203 YRMEVFAKVGEHMKSLEIFREMKERLGSVSVT-GYHKIIEVLCRAQEMDLSESLMQEFIE 261
+ + K G+ +L+ F MK R G V + Y +I LC+ +D + L + I+
Sbjct: 1139 SMISCYCKEGDIDLALKYFHNMK-RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMID 1197
Query: 262 SGMKP 266
G+ P
Sbjct: 1198 RGLSP 1202
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 166/397 (41%), Gaps = 45/397 (11%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M + Y+ D L + + + ++ L D ++ +G P T+ I+V
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK--- 233
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+G +D A S+ +M Q G +P + ++N++ AL + + + A +F + G
Sbjct: 234 RGDIDLALSLLKKMEQ-GKIEPGVVIYNTIIDAL------CNYKNVNDALNLFTEMDNKG 286
Query: 122 LEIQKHIYGGLI-WLHSY----------QDNIDR----------ARIASLREEMKLAGIE 160
+ Y LI L +Y D I+R A I + +E KL E
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 161 EGRDVLL------------SILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVF 208
+ D ++ S++ ++EA+ + ++ D P + ++ F
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 209 AKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLM 268
K + +E+FREM +R + Y +I +A+E D ++ + ++ + G+ P +
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 269 PSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIFTH 327
++S L++ N + VF + K P+ YN+ ++ + K G ++ ++F
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 328 ICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLM 364
+ S +GV + ++S + G +A+ ++ M
Sbjct: 527 L-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 132/326 (40%), Gaps = 29/326 (8%)
Query: 61 VQGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTS 120
+QG LD A + +MI G P L HN L L Y+++A+ + +
Sbjct: 133 LQGKLDAALWLRKKMI-YSGVIPGLITHNHLLNGLC------KAGYIEKADGLVREMREM 185
Query: 121 GLEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
G Y LI +N+D+A L M GI R I+ A + G +
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKA--LYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 181 EAEATWLK--LLRIDGGPPTQAFVYR--MEVFAKVGEHMKSLEIFREMKERLGSVSVTGY 236
L+ L P + M+ K G +++LE+++EM ++ Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 237 HKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLN-------LNLHDKLES 289
+ II LC + M + M + ++ G+ P + +++ L++ +LH +++
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 290 VFSACLKKCRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYL 349
A P++ Y + + L G++++A E F + N+++ Y
Sbjct: 364 GGVA------PDQISYKVIIQGLCIHGDVNRANE-FLLSMLKSSLLPEVLLWNVVIDGYG 416
Query: 350 SSGEHVKAENVYNLMCQKKYDIEPSL 375
G+ A +V NLM Y ++P++
Sbjct: 417 RYGDTSSALSVLNLMLS--YGVKPNV 440
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 162/363 (44%), Gaps = 17/363 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
M + Y+ D T L + + K ++ L + ++ +G P T+ ++
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK--- 227
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+G D A ++ N+M + G + + ++N++ L +++ A +F+ + T G
Sbjct: 228 RGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLC------KYKHMDDAFDLFNKMETKG 280
Query: 122 LEIQKHIYGGLI-WLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVE 180
++ Y LI L +Y D +R+ S +M I +++ A K+G +
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLS---DMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 181 EAEATWLKLLRIDGG-PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKI 239
EAE + ++++ P A+ ++ F K + +E+FREM +R + Y +
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 240 IEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK-C 298
I +A++ D ++ + ++ + G+ P + +++ L++ N + VF K+
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 299 RPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAE 358
+ + Y +++L K G ++ ++F + S +GV + ++S + G +A+
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 359 NVY 361
++
Sbjct: 517 ALF 519
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 118/278 (42%), Gaps = 17/278 (6%)
Query: 3 QQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQ 62
+Q YR D +A + + + A + L D++N S F + +A
Sbjct: 98 KQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNA--- 154
Query: 63 GCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGL 122
G +DEA S+++R+ ++G P +N L A+ +++S L +A + G
Sbjct: 155 GLVDEASSVFDRVREMGLCVPNAYTYNCLLEAI--SKSNSSSVELVEARL--KEMRDCGF 210
Query: 123 EIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEA 182
K ++ ++ +RA ++ E + ++E +L + + K G V++A
Sbjct: 211 HFDKFTLTPVLQVYCNTGKSERA-LSVFNEILSRGWLDEHISTILVV--SFCKWGQVDKA 267
Query: 183 EATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEV 242
L D + + + F K K+ ++F +M+ + + Y +I
Sbjct: 268 FELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGG 327
Query: 243 LCRAQEMDLSESLMQEFIESGMKP-------LMPSFSE 273
LC+ ++++++ SL E SG+ P L+ SFSE
Sbjct: 328 LCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSE 365
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 134/302 (44%), Gaps = 18/302 (5%)
Query: 80 GYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQ 139
GY P H S F ++V+ + +K AE I H++ G E Y LI H
Sbjct: 51 GYTP----HRSSFNSVVSFVCKLGQ--VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRN 104
Query: 140 DNIDRARIA--SLREEMKLAGIEEGRDVLL--SILRACSKDGDVEEAEATWLKLLRIDGG 195
+I A + SLR G D++ S+ SK ++E ++ ++
Sbjct: 105 GDIRSASLVLESLRAS---HGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCS 160
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESL 255
P + ++ F K GE +L+ F MK S +V + +I+ C+A +++++ SL
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 256 MQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVK 314
+E M + +++ L++ + + E ++S ++ + PN +Y +D +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 315 VGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDIEPS 374
G+ D A + + + +G+ + + +I+S +G+ +A + M +K D+ P
Sbjct: 281 RGDSDNAMKFLAKMLN-QGMRLDITAYGVIISGLCGNGKLKEATEIVEDM--EKSDLVPD 337
Query: 375 LM 376
++
Sbjct: 338 MV 339
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 133/330 (40%), Gaps = 37/330 (11%)
Query: 15 TKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNR 74
T L D +GK +L D++I G P T+++LV G +E IY R
Sbjct: 427 TTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR---NGHEEEVLEIYER 483
Query: 75 MIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIW 134
M + G KP ++ + L R +K+AE F +L E + G
Sbjct: 484 M-KAEGPKPNAVTNSVIIEGLCFA------RKVKEAEDFFSSLEQKCPENKASFVKG--- 533
Query: 135 LHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDG 194
+ +A A +R E L + V + + + +G +E+A K+
Sbjct: 534 -YCEAGLSKKAYKAFVRLEYPLR-----KSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRV 587
Query: 195 GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSES 254
P + F K+ ++ +F M ER + Y +I CR E+ +ES
Sbjct: 588 EPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAES 647
Query: 255 LMQEFIESGMKPLMPSFSELMNLYLNLNL-HDKLESV---------------FSACLKKC 298
L ++ + G+KP + +++ L++ YL L+ H + SV FSA
Sbjct: 648 LFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSA--AGI 705
Query: 299 RPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
+ Y + +D K+ NL++A E+F +
Sbjct: 706 GLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 196 PPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESL 255
P F ++VF K G+ ++++++ EM R V Y+ +I LC +D ++ +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 256 MQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRTI-YNMYLDSLVK 314
+ + G P + +++ L+N + D+ +F ++ TI YN + +
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 315 VGNLDKAEEIFTHI 328
G D A+EIF+ +
Sbjct: 362 AGRPDAAQEIFSRM 375
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 134/309 (43%), Gaps = 21/309 (6%)
Query: 23 KEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQL---G 79
K+G ++K +L D++ + G P+ + I ++ C D +M +L
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL-------CRDNKMEEAEKMFELMKKH 263
Query: 80 GYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQ 139
G P L ++ A++ T ++QA ++ ++ + L ++G L+
Sbjct: 264 GVLPNLYTYS----AMIDGYCKTGN--VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKA 317
Query: 140 DNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQ 199
+ AR SL M G++ V ++ K G++ EA ++ ++ P
Sbjct: 318 RELVTAR--SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVF 375
Query: 200 AFVYRMEVFAKVGEHMKSLEIFREMK-ERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQE 258
+ + + ++ +F++MK ER+ S T Y+ +I C+ M+ + L E
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT-YNSLIHGYCKEYNMEQALDLCSE 434
Query: 259 FIESGMKPLMPSFSELMNLYLNL-NLHDKLESVFSACLKKCRPNRTIYNMYLDSLVKVGN 317
SG++P + +FS L++ Y N+ ++ + F +K P+ Y +D+ K N
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 318 LDKAEEIFT 326
+ +A +++
Sbjct: 495 MKEALRLYS 503
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 123/308 (39%), Gaps = 16/308 (5%)
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
+GC++ +++ M Y R ++N + R ++ QA +F +
Sbjct: 120 RGCIELCVNVFKWMKIQKNYCARNDIYNMMIRL------HARHNWVDQARGLFFEMQKWS 173
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
+ Y LI H A +L ++M A I R +++ AC G+ E
Sbjct: 174 CKPDAETYDALINAHGRAGQWRWA--MNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
A K+ GP + + ++ K+L F MK T ++ II
Sbjct: 232 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 242 VLCR----AQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKK 297
L + +Q +DL S+ ++ E +P + +F+ +M+LY + +VF A + +
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAEC--RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 349
Query: 298 -CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVK 356
+PN YN + + G A + I G+ S +L++Y S + K
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDI-KQNGIIPDVVSYTCLLNSYGRSRQPGK 408
Query: 357 AENVYNLM 364
A+ V+ +M
Sbjct: 409 AKEVFLMM 416
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 44/261 (16%)
Query: 164 DVLL--SILRACSKDGDVEEAEATWLKLLRIDGGPPTQ-AFVYRMEVFAKVGEHMKSLEI 220
DV+L + + C + +V E E W ++++ DG T+ + + +F + G +L++
Sbjct: 213 DVVLYNTAISLCGRINNVYETERIW-RVMKGDGHIGTEITYSLLVSIFVRCGRSELALDV 271
Query: 221 FREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMN---- 276
+ EM S+ + +I + ++ DL+ + Q ++ GMKP + + + L+N
Sbjct: 272 YDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGK 331
Query: 277 ---LYLNLNLHDKLES------------VFSACLKK------------------CRPNRT 303
+ L ++ L+S + +A K C N
Sbjct: 332 AGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEY 391
Query: 304 IYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNL 363
+YN + S K+G +KA ++ + G G+ V+ S N+++SA S + A VY
Sbjct: 392 LYNTAMVSCQKLGYWEKAVKLLYEM-EGSGLTVSTSSYNLVISACEKSRKSKVALLVYEH 450
Query: 364 MCQKKYDIEPSLMQKLDYVLS 384
M Q+ D +P+ L V S
Sbjct: 451 MAQR--DCKPNTFTYLSLVRS 469
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 4/184 (2%)
Query: 208 FAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPL 267
AK G + ++F++MKER S + + +++ + +A +D S + E G +P
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 268 MPSFSELMNLYLNLNLHDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFT 326
F L++ Y D ++ K RPN +Y M ++S K G L+ A +F
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 327 HICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDIEPSLMQKLDYVLSLS 386
+ G T + + +L + SG+ A +YN M + P L + + L+
Sbjct: 443 DM-EKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA--GLRPGLSSYISLLTLLA 499
Query: 387 RKEV 390
K +
Sbjct: 500 NKRL 503
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 150/365 (41%), Gaps = 15/365 (4%)
Query: 7 YRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLD 66
++F A S ++ + + C L ++ PS++ F I + AYL +G
Sbjct: 92 HKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLH---EGKPH 148
Query: 67 EACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQK 126
A I+ +MI+L KP L N+L LV P+ S + A +F ++V G+ +
Sbjct: 149 VALQIFQKMIRL-KLKPNLLTCNTLLIGLVRYPSSFS---ISSAREVFDDMVKIGVSLNV 204
Query: 127 HIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATW 186
+ L+ + + ++ A + L + + +IL+A SK G + + +
Sbjct: 205 QTFNVLVNGYCLEGKLEDA-LGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 187 LKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRA 246
L + + P + + + K+G ++ +I MK+ + Y+ +I LC A
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 247 QEMDLSESLMQEFIESGMKPLMPSFSELMN----LYLNLNLHDKLESVFSACLKKCRPNR 302
M LM ++P + +++ L++ L L+L +E + + +K N+
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK---ANQ 380
Query: 303 TIYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYN 362
+N+ L L K + + G + + ++ AYL G+ A +
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 363 LMCQK 367
M QK
Sbjct: 441 EMGQK 445
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 143/359 (39%), Gaps = 45/359 (12%)
Query: 21 MGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGG 80
M K+G+ + +EL D+ G VP+ T++ LV Y G L EA I M Q
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKL---GSLKEAFQIVELMKQ-TN 305
Query: 81 YKPRLSLHNSLFRALVTKPA--------DTSKRYLKQAEFIFHNLVTSG-LEIQKHIYGG 131
P L +N L L + D K Q + + +N + G E+ G
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL------G 359
Query: 132 LIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLR 191
L AR L E+M+ G++ + L+ K+ E +L+
Sbjct: 360 LSL---------EAR--KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVD 408
Query: 192 IDG-GPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMD 250
+ G P + ++ + KVG+ +LE+ REM ++ ++ + I++ LC+ +++D
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
Query: 251 LSESLMQE-----FI--ESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKCRPNRT 303
+ +L+ FI E L+ F + L + D+++ V K P +
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV------KITPTVS 522
Query: 304 IYNMYLDSLVKVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYN 362
+N + L G + A E F + G+ + N I+ Y G KA YN
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAES-GLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/291 (18%), Positives = 125/291 (42%), Gaps = 12/291 (4%)
Query: 2 MQQHWYRFDFALSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPV 61
+++ R + T L + + +++ L D+I + P+ T+ L+ A++
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK--- 272
Query: 62 QGCLDEACSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSG 121
G + EA ++ M+++ P + ++SL L + +A +F +V+ G
Sbjct: 273 NGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDR------IDEANQMFDLMVSKG 325
Query: 122 LEIQKHIYGGLIWLHSYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEE 181
Y LI ++ L EM G+ ++++ + GDV++
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDG--MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 182 AEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIE 241
A+ + ++ P + + GE K+L IF +M++R + + Y +I
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 242 VLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNLHDKLESVFS 292
+C+ +++ + SL G+KP + +++ +M+ L ++E++++
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 164 DVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFRE 223
+VL+ L C DG V+ +L++ + P + + + + G ++ ++F E
Sbjct: 160 NVLIKAL--CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 224 MKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELMNLYLNLNL 283
M E+ + +V Y +I LC ++ +D + ++E G++P + ++S LM+
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 284 HDKLESVFSACLKK-CRPNRTIYNMYLDSLVKVGNLDKAEEIFTHI 328
+ +F + + CRPN Y + L K + +A E+ +
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 16/245 (6%)
Query: 150 LREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFA 209
L EMK G E + +AC++ DV E L++ +++F
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 210 KVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMP 269
K + ++F M ER T ++ ++ C++ D + SL F E + + P
Sbjct: 99 KCNSVDYAAKVFERMPER----DATTWNAMLSGFCQSGHTDKAFSL---FREMRLNEITP 151
Query: 270 SFSELMNLYLNLNLHDK---LESVFSACLK-KCRPNRTIYNMYLDSLVKVGNLDKAEEIF 325
+M L + + LE++ + ++ T+ N ++ + K G+LD A+ +F
Sbjct: 152 DSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVF 211
Query: 326 THICSGEGVGVTGRSCNIILSAYLSSGEHVKAENVYNLMCQKKYDIEPSLMQKLDYVLSL 385
I G+ V S N + AY GE A +Y LM ++++ +P L ++ S
Sbjct: 212 EAIDRGDRTVV---SWNSMFKAYSVFGEAFDAFGLYCLMLREEF--KPDLSTFINLAASC 266
Query: 386 SRKEV 390
E
Sbjct: 267 QNPET 271
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 163/428 (38%), Gaps = 81/428 (18%)
Query: 11 FALST--KLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEA 68
LST KL + K+G +C +L D +I +G +P+ T+++ + +G LD A
Sbjct: 214 LCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ---RGELDGA 270
Query: 69 CSIYNRMIQLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHI 128
+ +I+ G KP + +N+L L SK ++AE +V GLE +
Sbjct: 271 VRMVGCLIEQGP-KPDVITYNNLIYGL----CKNSK--FQEAEVYLGKMVNEGLEPDSYT 323
Query: 129 Y---------GGLIWL-----------------HSYQDNID-------RARIASLREEMK 155
Y GG++ L +Y+ ID R +L E
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 156 LAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHM 215
GI+ + ++++ S G + EA ++ P Q F + K+G
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 216 KSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEFIESGMKPLMPSFSELM 275
+ + + M + + ++ +I +M+ + ++ +++G+ P + +++ L+
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 276 N-LYLNLNLHDKLESVFSACLKKCRPNRTIYNMYLDSLV--------------------- 313
N L D +E+ + K C PN +N+ L+SL
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 314 --------------KVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGEHVKAEN 359
K G+LD A +F + V + + NII+ A+ AE
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEK 623
Query: 360 VYNLMCQK 367
++ M +
Sbjct: 624 LFQEMVDR 631
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/308 (18%), Positives = 129/308 (41%), Gaps = 20/308 (6%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
L D + EG+ + LF++ + +G P+ ++ L+ + QG + EA + N M
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN---QGMILEAAQLANEMS 418
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLH 136
+ G P + N L L + A+ + +++ G I+ I +H
Sbjct: 419 E-KGLIPEVQTFNILVNGLCKMGC------VSDADGLVKVMISKGY--FPDIFTFNILIH 469
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGP 196
Y + + + M G++ S+L K E+ T+ ++ P
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 197 PTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLM 256
F +E + + ++L + EMK + + + +I+ C+ ++D + +L
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 257 QEFIES-GMKPLMPSFSELMNLY---LNLNLHDKLESVFSACLKKC-RPNRTIYNMYLDS 311
++ E+ + P+++ +++ + LN+ + +KL F + +C P+ Y + +D
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKL---FQEMVDRCLGPDGYTYRLMVDG 646
Query: 312 LVKVGNLD 319
K GN++
Sbjct: 647 FCKTGNVN 654
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 208 FAKVGEHMKSLEIFREM---KERLGSVSVTGYHKIIEVLC-RAQE-------MDLSESLM 256
F K G+ ++++ IFR M K ++ YH + + L R M+ SL
Sbjct: 217 FTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLF 276
Query: 257 QEFIESGMKPLMPSFSELMNLY-LNLNLHDKLESVFS--ACLKKCRPNRTIYNMYLDSLV 313
++ ++SG++P + + + L+ Y L+L+++D L +F + + C PN Y+ + L
Sbjct: 277 RQMVDSGIEPDVFALNCLVKGYVLSLHVNDALR-IFHQMSVVYDCEPNSFTYDYLIHGLC 335
Query: 314 KVGNLDKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGE 353
G A E+ + + G+G G+S N +++A+ SGE
Sbjct: 336 AQGRTINARELLSEM-KGKGFVPNGKSYNSLVNAFALSGE 374
>AT2G01390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:172256-174137 FORWARD
Length = 577
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Query: 200 AFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQEF 259
+ +++F + G +F MKE+ + Y +I + + ++D + L +E
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 260 IESGMKPLMPSFSELMNLYLNLNLHDKLESVFSACLK-KCRPNRTIYNMYLDSLVKVGNL 318
++G +P + S++ M + ++ V+ L+ + PN Y + ++ LV G
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 319 DKAEEIFTHICSGEGVGVTGRSCNIILSAYLSSGE 353
++A +IF + GV +CNI+++ L GE
Sbjct: 244 EEALDIFFKM-QEIGVQPDKAACNILIAKALKFGE 277
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 24/308 (7%)
Query: 26 KFAKCRELFDDIINQ-GRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMIQLGGYKPR 84
+F +L D++ + G P ++ F ++ + A + + S+ + ++ G KP
Sbjct: 91 RFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARL---IKRVISVVD-LVSKFGIKPS 146
Query: 85 LSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLHSYQDNIDR 144
L + NS+ LV + D ++ EF ++ SG+ + YG L+ S + I
Sbjct: 147 LKVFNSILDVLVKEDIDIAR------EFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 145 ARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYR 204
L + MK +G+ V ++L A K+G V A + ++ P F
Sbjct: 201 G--FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNIL 254
Query: 205 MEVFAKVGEHMKSLEIFREMKERLGSV-SVTGYHKIIEVLCRAQEMDLSESL-MQEFIES 262
+ + + ++S+ + E LG V V K++EVLC E +SE+L + E +ES
Sbjct: 255 ISAYCNEQKLIQSM-VLLEKCFSLGFVPDVVTVTKVMEVLC--NEGRVSEALEVLERVES 311
Query: 263 -GMKPLMPSFSELMNLYLNLNLHDKLESVFSACLKKC-RPNRTIYNMYLDSLVKVGNLDK 320
G K + + + L+ Y L + F +K PN YN+ + VG LD
Sbjct: 312 KGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDS 371
Query: 321 AEEIFTHI 328
A + F +
Sbjct: 372 ALDTFNDM 379
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 137/317 (43%), Gaps = 24/317 (7%)
Query: 17 LADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIYNRMI 76
+ D GK G+ + E F ++ +G VP+ TF+ ++ Y + G L E S+ M
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN---NGQLGEVTSLMKTMK 360
Query: 77 QLGGYKPRLSLHNSLFRALVTKPADTSKRYLKQAEFIFHNLVTSGLEIQKHIYGGLIWLH 136
P +N L +L TK D +++A F + GL+ Y L++
Sbjct: 361 LHCA--PDTRTYNILI-SLHTKNND-----IERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 137 SYQDNIDRARIASLREEMKLAGIEEGRDVLLSILRACSKDGDVEEAEATWLKLLRIDGGP 196
S + ++ A L EM +E + S L + ++ E +W K + G
Sbjct: 413 SIRHMVEEAE--GLIAEMDDDNVEID-EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM 469
Query: 197 PTQAFVYRMEVFAKVGEHMKSLEIFREMKERLGSVSVTGYHKIIEVLCRAQEMDLSESLM 256
++ + ++ + + G ++ +F +E + +V Y+ +I+ ++ + + L
Sbjct: 470 SSEGYSANIDAYGERGYLSEAERVFICCQE-VNKRTVIEYNVMIKAYGISKSCEKACELF 528
Query: 257 QEFIESGMKPLMPSFSELMNLYLNLNLHDK----LESVF-SACLKKCRPNRTIYNMYLDS 311
+ + G+ P +++ L+ + + ++ K LE + + + C P Y + S
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP----YCAVISS 584
Query: 312 LVKVGNLDKAEEIFTHI 328
VK+G L+ AEE++ +
Sbjct: 585 FVKLGQLNMAEEVYKEM 601
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 117/272 (43%), Gaps = 30/272 (11%)
Query: 13 LSTKLADYMGKEGKFAKCRELFDDIINQGRVPSESTFHILVIAYLSAPVQGCLDEACSIY 72
+ ++ GK G F +++F+++ N+ S +F+ L+ AY + ++E ++
Sbjct: 111 FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEE---LF 167
Query: 73 NRMIQLGGYKPRLSLHNSLFRALVTKPA---------DTSKRYLKQAEFIFHNLVTSGLE 123
N + KP + +N+L +AL K + + + LK F+ L+ S
Sbjct: 168 NELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYL 227
Query: 124 IQKHIYGGLIWLHSYQDNID------RARIASLREE------------MKLAGIEEGRDV 165
+ G IW + N+ AR+ L E +K +G++
Sbjct: 228 KGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFS 287
Query: 166 LLSILRACSKDGDVEEAEATWLKLLRIDGGPPTQAFVYRMEVFAKVGEHMKSLEIFREMK 225
+++R +G ++EAEA + ++++ P F + K G+ ++E+F+E
Sbjct: 288 FNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETF 347
Query: 226 ERLGSVSVTGYHKIIEVLCRAQEMDLSESLMQ 257
+ V T ++++ L + + + +E +++
Sbjct: 348 SKRYLVGQTTLQQLVDELVKGSKREEAEEIVK 379