Jatropha Genome Database
- JcCB0063661.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0063661.10 + phase: 0
(241 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 344 3e-95
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 332 1e-91
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 305 2e-83
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 298 3e-81
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 276 1e-74
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 227 5e-60
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 222 2e-58
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 222 2e-58
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 218 2e-57
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 214 5e-56
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 213 6e-56
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 178 2e-45
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 167 4e-42
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 162 2e-40
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 144 4e-35
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 139 2e-33
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 138 3e-33
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 137 7e-33
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 133 8e-32
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 133 8e-32
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 133 1e-31
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 130 6e-31
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 129 2e-30
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 127 7e-30
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 125 3e-29
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 124 4e-29
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 113 1e-25
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 111 5e-25
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 106 1e-23
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 91 5e-19
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 77 1e-14
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 77 1e-14
AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUC... 70 1e-12
AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID INDUC... 62 3e-10
AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID INDUC... 62 4e-10
AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 59 4e-09
AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);... 53 2e-07
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 53 2e-07
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 53 2e-07
AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID INDUC... 50 2e-06
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 49 3e-06
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 49 3e-06
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 49 3e-06
AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 48 4e-06
AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 48 4e-06
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 48 7e-06
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 47 7e-06
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4... 47 7e-06
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 344 bits (882), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 179/238 (75%), Positives = 202/238 (84%), Gaps = 19/238 (7%)
Query: 13 LNFKETELCLGLPGGGKTEVETPKATG---KRGFAETVDLKLNLQA-KDGVMDLNENIKN 68
+N KETELCLGLPGG +T VE+P +G KRGF+ETVDLKLNLQ+ K G +DLN N
Sbjct: 1 MNLKETELCLGLPGGTET-VESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTN--G 57
Query: 69 ASKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSA----- 123
A K+K L KDP+KPPAKAQVVGWPPVR+YRKN+MANQK S E E+++S+
Sbjct: 58 APKEKTFL-----KDPSKPPAKAQVVGWPPVRNYRKNVMANQK--SGEAEEAMSSGGGTV 110
Query: 124 AFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDL 183
AFVKV MDGAPYLRKVDLKMY SY++LSDALAKMFSSFTMG+YGAQGMIDFMNESK+MDL
Sbjct: 111 AFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDL 170
Query: 184 LNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSRT 241
LNSSEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGLAPRAMEK K+R+
Sbjct: 171 LNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 332 bits (851), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/245 (70%), Positives = 197/245 (80%), Gaps = 23/245 (9%)
Query: 13 LNFKETELCLGLPGGGKTEVETPKATG---KRGFAETVDLKLNLQA-KDGVMDLNENIKN 68
+N K TELCLGLPGG + VE+P + KRGF+ETVDL LNLQ+ K+G +DL +N+
Sbjct: 6 MNLKATELCLGLPGGAEA-VESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDL-KNVSA 63
Query: 69 ASKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKS-------- 120
K+K +T+KDP+KPPAKAQVVGWPPVR+YRKN+M QK +S E S
Sbjct: 64 VPKEK-----TTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFG 118
Query: 121 ---LSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNE 177
A VKV MDGAPYLRKVDLKMYKSYQ+LSDALAKMFSSFTMGNYGAQGMIDFMNE
Sbjct: 119 GGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNE 178
Query: 178 SKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEK- 236
SKLM+LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GLAPRAMEK
Sbjct: 179 SKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKY 238
Query: 237 CKSRT 241
CK+R+
Sbjct: 239 CKNRS 243
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 305 bits (780), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/235 (67%), Positives = 185/235 (78%), Gaps = 16/235 (6%)
Query: 11 ADLNFKETELCLGLPGGGKTEVETPKATGKRGFAETVDLKLNLQA----KDGVMDLNENI 66
+LN +ETELCLGLPGG + P KRGF+ETVDLKLNL K+G ++ +
Sbjct: 5 VELNLRETELCLGLPGG---DTVAPVTGNKRGFSETVDLKLNLNNEPANKEGST-THDVV 60
Query: 67 KNASKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSAAFV 126
SK+K+ P KDPAKPPAKAQVVGWPPVRSYRKN+M + + +S E +AAFV
Sbjct: 61 TFDSKEKSACP----KDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPE---AAAFV 113
Query: 127 KVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQ-GMIDFMNESKLMDLLN 185
KV MDGAPYLRK+DL+MYKSY ELS+AL+ MFSSFTMG +G + GMIDFMNE KLMDL+N
Sbjct: 114 KVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVN 173
Query: 186 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSR 240
S +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGLAPRAMEKCKSR
Sbjct: 174 SWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSR 228
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 298 bits (762), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/249 (62%), Positives = 182/249 (73%), Gaps = 34/249 (13%)
Query: 13 LNFKETELCLGLPGGGKTEVETPKATGKRGFAETVDLKLNLQ--AKDGVMDLN-ENIKNA 69
+NF+ TEL LGLPGG K GKRGF+ETVDLKLNL A D V ++ EN+K
Sbjct: 2 INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLENMKEK 61
Query: 70 SKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQK---NNSDEGE-------- 118
KPPAKAQVVGWPPVRS+RKN+M+ QK ++ EG
Sbjct: 62 V--------------VKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSG 107
Query: 119 ------KSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMI 172
+ A+VKV MDGAPYLRK+DLK+YK+YQ+LS+AL+KMFSSFT+GNYG QGM
Sbjct: 108 ATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMK 167
Query: 173 DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPR 232
DFMNESKL+DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGLAPR
Sbjct: 168 DFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPR 227
Query: 233 AMEKCKSRT 241
A+EKCK+R+
Sbjct: 228 ALEKCKNRS 236
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 165/212 (77%), Gaps = 22/212 (10%)
Query: 13 LNFKETELCLGLPGGGKTEVETPKATG---KRGFAETVDLKLNLQA-KDGVMDLNENIKN 68
+N K TELCLGLPGG + VE+P + KRGF+ETVDL LNLQ+ K+G +DL +N+
Sbjct: 6 MNLKATELCLGLPGGAEA-VESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDL-KNVSA 63
Query: 69 ASKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKS-------- 120
K+K +T+KDP+KPPAKAQVVGWPPVR+YRKN+M QK +S E S
Sbjct: 64 VPKEK-----TTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFG 118
Query: 121 ---LSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNE 177
A VKV MDGAPYLRKVDLKMYKSYQ+LSDALAKMFSSFTMGNYGAQGMIDFMNE
Sbjct: 119 GGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNE 178
Query: 178 SKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWE 209
SKLM+LLNSSEYVP+YEDKDGDWMLVGDVPWE
Sbjct: 179 SKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 227 bits (579), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/267 (48%), Positives = 159/267 (59%), Gaps = 39/267 (14%)
Query: 13 LNFKETELCLGLPGGGKTE-----------VETPKATGKRGFAETVDLKLNLQAKDGVMD 61
LNFK TEL LGLPG E P + KR F++ ++ G
Sbjct: 38 LNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSGAKRVFSDAINDSNKWVFSPGSTT 97
Query: 62 LNENIKNASKDKNHL----PTSTIKDPA-----------KPPAKAQVVGWPPVRSYRKNI 106
++ + S + + ++T PA P +KAQVVGWPP+RS+RKN
Sbjct: 98 ATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNS 157
Query: 107 MANQK-----NNSDEGEKSLSAA------FVKVCMDGAPYLRKVDLKMYKSYQELSDALA 155
MA+ + NNS+ E + +VKV M+GAPYLRK+DLK YKSY ELS AL
Sbjct: 158 MASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALE 217
Query: 156 KMFSSFTMGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVD 213
KMFS FT+G +G+ G D +NES+L DLL SEYV TYEDKD DWMLVGDVPWEMF+
Sbjct: 218 KMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFIC 277
Query: 214 SCKRLRIMKGSEAIGLAPRAMEKCKSR 240
SCK+LRIMK SEAIGLAPR MEKC+SR
Sbjct: 278 SCKKLRIMKSSEAIGLAPRVMEKCRSR 304
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 177/279 (63%), Gaps = 52/279 (18%)
Query: 10 RADLNFKETELCLGLPGGGKTEVET------PKA-------------------TG----- 39
+++LNFK TEL LGLP E ET P+ TG
Sbjct: 44 KSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVV 103
Query: 40 ---KRGFAETVD----LKLNLQAKDGV-MDLNENIKNASK----DKNHLPTSTIKDPAKP 87
KRGFA+T D +K +++ G+ M L+ +K+ SK +++H PA
Sbjct: 104 SGNKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPA-- 161
Query: 88 PAKAQVVGWPPVRSYRKNIMANQKN-NSDE--GEKSLSAAFVKVCMDGAPYLRKVDLKMY 144
AKAQVVGWPP+RSYRKN MA+ + N+DE G+ L FVKV MDGAPYLRKVDL+ Y
Sbjct: 162 -AKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTY 220
Query: 145 KSYQELSDALAKMFSSFTMGN---YGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWM 201
SYQ+LS AL KMFS FT+G +GAQG + M+E KL DLL+ SE+V TYEDKDGDWM
Sbjct: 221 TSYQQLSSALEKMFSCFTLGQCGLHGAQGR-ERMSEIKLKDLLHGSEFVLTYEDKDGDWM 279
Query: 202 LVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSR 240
LVGDVPWE+F ++C++L+IMKGS++IGLAP A+EK K++
Sbjct: 280 LVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 177/279 (63%), Gaps = 52/279 (18%)
Query: 10 RADLNFKETELCLGLPGGGKTEVET------PKA-------------------TG----- 39
+++LNFK TEL LGLP E ET P+ TG
Sbjct: 44 KSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVV 103
Query: 40 ---KRGFAETVD----LKLNLQAKDGV-MDLNENIKNASK----DKNHLPTSTIKDPAKP 87
KRGFA+T D +K +++ G+ M L+ +K+ SK +++H PA
Sbjct: 104 SGNKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPA-- 161
Query: 88 PAKAQVVGWPPVRSYRKNIMANQKN-NSDE--GEKSLSAAFVKVCMDGAPYLRKVDLKMY 144
AKAQVVGWPP+RSYRKN MA+ + N+DE G+ L FVKV MDGAPYLRKVDL+ Y
Sbjct: 162 -AKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTY 220
Query: 145 KSYQELSDALAKMFSSFTMGN---YGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWM 201
SYQ+LS AL KMFS FT+G +GAQG + M+E KL DLL+ SE+V TYEDKDGDWM
Sbjct: 221 TSYQQLSSALEKMFSCFTLGQCGLHGAQGR-ERMSEIKLKDLLHGSEFVLTYEDKDGDWM 279
Query: 202 LVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSR 240
LVGDVPWE+F ++C++L+IMKGS++IGLAP A+EK K++
Sbjct: 280 LVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSKNK 318
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 165/281 (58%), Gaps = 51/281 (18%)
Query: 9 ERADLNFKETELCLGLPGGGK----TEV---------ETP------------------KA 37
++A ++ K TEL LGLPG TE+ E P A
Sbjct: 57 DKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNA 116
Query: 38 TG-KRGFAETVDLKLNLQAKDGVMD-----LNENIKNASKDKNHLPTSTIK--------D 83
+G KRGF++T+D +AK V E S K +P + K
Sbjct: 117 SGNKRGFSDTMDQ--FAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNS 174
Query: 84 PAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDE--GEKSLSAAFVKVCMDGAPYLRKVDL 141
+ P AKAQ+VGWPPVRSYRKN +A NSDE G A FVKV MDGAPYLRKVDL
Sbjct: 175 SSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDL 234
Query: 142 KMYKSYQELSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGD 199
+ Y +Y ELS AL KMF++FT+G G+ G D ++E+KL DLLN +YV TYEDKDGD
Sbjct: 235 RSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGD 294
Query: 200 WMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSR 240
WMLVGDVPWEMF+D CK+L+IMKG +AIGLAPRAMEK K R
Sbjct: 295 WMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAPRAMEKSKMR 335
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 214 bits (544), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 175/279 (62%), Gaps = 54/279 (19%)
Query: 10 RADLNFKETELCLGLPGGGKTEVET------PKA-------------------TG----- 39
+++LNFK TEL LGLP E ET P+ TG
Sbjct: 44 KSNLNFKATELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLPSKDNGSATTGHKNVV 103
Query: 40 ---KRGFAETVD----LKLNLQAKDGV-MDLNENIKNASK----DKNHLPTSTIKDPAKP 87
KRGFA+T D +K +++ G+ M L+ +K+ SK +++H PA
Sbjct: 104 SGNKRGFADTWDEFSGVKGSVRPGGGINMMLSPKVKDVSKSIQEERSHAKGGLNNAPA-- 161
Query: 88 PAKAQVVGWPPVRSYRKNIMANQKN-NSDE--GEKSLSAAFVKVCMDGAPYLRKVDLKMY 144
AKAQVVGWPP+RSYRKN MA+ + N+DE G+ L FVKV MDGAPYLRKVDL+ Y
Sbjct: 162 -AKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTY 220
Query: 145 KSYQELSDALAKMFSSFTMGN---YGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWM 201
SYQ+LS AL KMFS FT+G +GAQG + M+E KL DLL+ SE+V TYEDKDGDWM
Sbjct: 221 TSYQQLSSALEKMFSCFTLGQCGLHGAQGR-ERMSEIKLKDLLHGSEFVLTYEDKDGDWM 279
Query: 202 LVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSR 240
LVGDVPWE+F ++C++L+IMKGS++IGL A+EK K++
Sbjct: 280 LVGDVPWEIFTETCQKLKIMKGSDSIGLG--AVEKSKNK 316
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 213 bits (543), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 165/283 (58%), Gaps = 53/283 (18%)
Query: 9 ERADLNFKETELCLGLPGGGK----TEV---------ETP------------------KA 37
++A ++ K TEL LGLPG TE+ E P A
Sbjct: 57 DKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNA 116
Query: 38 TG-KRGFAETVDLKLNLQAKDGVMD-----LNENIKNASKDKNHLPTSTIK--------D 83
+G KRGF++T+D +AK V E S K +P + K
Sbjct: 117 SGNKRGFSDTMDQ--FAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNS 174
Query: 84 PAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDE--GEKSLSAAFVKVCMDGAPYLRKVDL 141
+ P AKAQ+VGWPPVRSYRKN +A NSDE G A FVKV MDGAPYLRKVDL
Sbjct: 175 SSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDL 234
Query: 142 KMYKSYQELSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGD 199
+ Y +Y ELS AL KMF++FT+G G+ G D ++E+KL DLLN +YV TYEDKDGD
Sbjct: 235 RSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGD 294
Query: 200 WMLVGDVPWEMFVDSCKRLRIMKGSEAIGL--APRAMEKCKSR 240
WMLVGDVPWEMF+D CK+L+IMKG +AIGL APRAMEK K R
Sbjct: 295 WMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMR 337
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 126/220 (57%), Gaps = 40/220 (18%)
Query: 13 LNFKETELCLGLPGGGKTEVETPKATGKRGFAETVDLKLNLQAKDGVMDLNENIKN--AS 70
+N KETEL LGLPG +AK+ V N N K ++
Sbjct: 5 VNLKETELRLGLPGTDNV----------------------CEAKERVSCCNNNNKRVLST 42
Query: 71 KDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSAAFVKVCM 130
+ + +S+ K PP KAQ+VGWPPVRSYRKN + ++KN E E +VKV M
Sbjct: 43 DTEKEIESSSRKTETSPPRKAQIVGWPPVRSYRKNNIQSKKN---ESEHEGQGIYVKVSM 99
Query: 131 DGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYV 190
DGAPYLRK+DL YK Y EL AL MF F++G Y + D S++V
Sbjct: 100 DGAPYLRKIDLSCYKGYSELLKALEVMFK-FSVGEYFER------------DGYKGSDFV 146
Query: 191 PTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 230
PTYEDKDGDWML+GDVPWEMF+ +CKRLRIMKGSEA GL
Sbjct: 147 PTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGLG 186
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 120/196 (61%), Gaps = 28/196 (14%)
Query: 43 FAETVDLKLNLQAKDGVMDLNENIKNASKDKNHLPTSTIKD--------PAKPPAKAQVV 94
+ E V+LK + + G+ E + +K LP +T K+ A PP KAQ+V
Sbjct: 7 YDELVNLKAT-ELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPP-KAQIV 64
Query: 95 GWPPVRSYRKNIMANQKNNSDEGEKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDAL 154
GWPPVRSYRKN + +K+ S EG+ +VKV MDGAPYLRK+DL MYK Y EL +L
Sbjct: 65 GWPPVRSYRKNNVQTKKSES-EGQ----GNYVKVSMDGAPYLRKIDLTMYKQYPELMKSL 119
Query: 155 AKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDS 214
MF F++G Y F E S++VPTYEDKDGDWMLVGDVPWEMFV S
Sbjct: 120 ENMFK-FSVGEY-------FEREG-----YKGSDFVPTYEDKDGDWMLVGDVPWEMFVSS 166
Query: 215 CKRLRIMKGSEAIGLA 230
CKRLRIMKGSE GL
Sbjct: 167 CKRLRIMKGSEVKGLG 182
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 118/223 (52%), Gaps = 65/223 (29%)
Query: 12 DLNFKETELCLGLPGGG-----KTEVETPKATGKRGFAETVDLKLNLQAKDGVMDLNENI 66
+LN K+TELCLGLPG + EV K+ KR F ET D
Sbjct: 8 ELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRD------------------ 49
Query: 67 KNASKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSAAFV 126
++ + PP K Q+VGWPPVRS RKN NN S ++V
Sbjct: 50 ---------------EEESTPPTKTQIVGWPPVRSSRKN------NN--------SVSYV 80
Query: 127 KVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNS 186
KV MDGAPYLRK+DLK YK+Y EL AL MF +G Y + +
Sbjct: 81 KVSMDGAPYLRKIDLKTYKNYPELLKALENMF-KVMIGEYCER------------EGYKG 127
Query: 187 SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 229
S +VPTYEDKDGDWMLVGDVPW+MF SCKRLRIMKGS+A L
Sbjct: 128 SGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 120/214 (56%), Gaps = 56/214 (26%)
Query: 13 LNFKETELCLGLPGGGKTEVETPKATGKRGFAETVDLKLNLQAKDGVMDLNENIKNASKD 72
LN K+TEL LGLPG E L+L+ +++ +K
Sbjct: 7 LNLKDTELRLGLPGA----------------QEEQQLELSC------------VRSNNKR 38
Query: 73 KNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSAAFVKVCMDG 132
KN+ + ++ A PPAK Q+VGWPPVRS RKN + ++VKV MDG
Sbjct: 39 KNN---DSTEESAPPPAKTQIVGWPPVRSNRKNNNNK------------NVSYVKVSMDG 83
Query: 133 APYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPT 192
APYLRK+DLKMYK+Y EL AL MF FT+G Y + + S +VPT
Sbjct: 84 APYLRKIDLKMYKNYPELLKALENMFK-FTVGEYSER------------EGYKGSGFVPT 130
Query: 193 YEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA 226
YEDKDGDWMLVGDVPW+MF SC++LRIMKGSEA
Sbjct: 131 YEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 124/232 (53%), Gaps = 40/232 (17%)
Query: 9 ERADLNFKETELCLGLPGGGKTEVETPKATGKRGFAETVDLKLNLQAKDGVMDLNEN-IK 67
E+ L + TEL LGLPG E K KR F E +N+ + D E+ +
Sbjct: 2 EKEGLGLEITELRLGLPGRDVAE----KMMKKRAFTE-----MNMTSSGSNSDQCESGVV 52
Query: 68 NASKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKS-LSAAFV 126
++ D + S P AK+QVVGWPPV SYRK KN+ E + + +V
Sbjct: 53 SSGGDAEKVNDS-------PAAKSQVVGWPPVCSYRK------KNSCKEASTTKVGLGYV 99
Query: 127 KVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNS 186
KV MDG PYLRK+DL + Y +L+ AL K+F +G G ++
Sbjct: 100 KVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDG--------------DN 145
Query: 187 SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA--IGLAPRAMEK 236
EYV YEDKDGDWML GDVPW MF++SCKRLRIMK S+A GL PR +++
Sbjct: 146 CEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRGVDE 197
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 109/213 (51%), Gaps = 53/213 (24%)
Query: 18 TELCLGLPGGGKTEVETPKATG-KRGFAETVDLKLNLQAKDGVMDLNENIKNASKDKNHL 76
TEL L LPG E PK G KR F ETVDLKL + + N++
Sbjct: 19 TELTLALPGTPTNASEGPKKFGNKRRFLETVDLKLG----------------EAHENNYI 62
Query: 77 PTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSAAFVKVCMDGAPYL 136
+ D Q+VGWPPV + RK + +VKV +DGA YL
Sbjct: 63 SSMVTND--------QLVGWPPVATARKTV---------------RRKYVKVALDGAAYL 99
Query: 137 RKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDK 196
RKVDL MY Y +L AL MF QG+I ++ +L E+V TYEDK
Sbjct: 100 RKVDLGMYDCYGQLFTALENMF----------QGIITI---CRVTELERKGEFVATYEDK 146
Query: 197 DGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 229
DGD MLVGDVPW MFV+SCKR+R+MK +AIGL
Sbjct: 147 DGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 104/180 (57%), Gaps = 31/180 (17%)
Query: 45 ETVDLKLNLQAKDGVMDLNENIKNASKDKNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRK 104
E +L+L L D+ + ++ S K P I +P K+QVVGWPPV SYR+
Sbjct: 11 EITELRLGLPG-----DIVVSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYRR 65
Query: 105 NIMANQKNNSDEGEKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMG 164
NS E KS ++VKV +DGA +LRK+DL+MYK YQ+L+ AL +F +
Sbjct: 66 K-------NSLERTKS---SYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCY--- 112
Query: 165 NYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGS 224
I+F D L SE VP YEDKDGDWML GDVPWEMF+ SCKRLRIMK S
Sbjct: 113 -------INFD------DTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 94/173 (54%), Gaps = 26/173 (15%)
Query: 85 AKPPAKAQVVGWPPVRSYRKNIMANQ------KNNSDEGEKSL----------------S 122
+ PP +QVVGWPP+ S+R N + N + + G+K +
Sbjct: 68 SSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQ 127
Query: 123 AAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMD 182
F+KV MDG RKVDL + SY+ L+ L MF G G F +L+D
Sbjct: 128 VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQ--FTKPLRLLD 185
Query: 183 LLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAME 235
SSE+V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GLA R E
Sbjct: 186 --GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 236
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 94/173 (54%), Gaps = 26/173 (15%)
Query: 85 AKPPAKAQVVGWPPVRSYRKNIMANQ------KNNSDEGEKSL----------------S 122
+ PP +QVVGWPP+ S+R N + N + + G+K +
Sbjct: 68 SSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQ 127
Query: 123 AAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMD 182
F+KV MDG RKVDL + SY+ L+ L MF G G F +L+D
Sbjct: 128 VGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQ--FTKPLRLLD 185
Query: 183 LLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAME 235
SSE+V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GLA R E
Sbjct: 186 --GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 236
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 116/218 (53%), Gaps = 38/218 (17%)
Query: 13 LNFKETELCLGLPGGGKTEVETPKATGKRGFAETVDLKLNLQAKDGVMDLNENIKNASKD 72
L + TEL LGLPG +E+ ++ K+ K + D+ + +++
Sbjct: 6 LALEITELRLGLPGDNYSEISVCGSSKKK--------------KRVLSDMMTSSALDTEN 51
Query: 73 KNHLPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSAAFVKVCMDG 132
+N + S+++D + P K+Q VGWPPV SYR+ K N++E K++ +VKV MDG
Sbjct: 52 ENSV-VSSVEDESLPVVKSQAVGWPPVCSYRR------KKNNEEASKAI--GYVKVSMDG 102
Query: 133 APYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPT 192
PY+RK+DL SY L L +F +G E K EY+
Sbjct: 103 VPYMRKIDLGSSNSYINLVTVLENLFGCLGIG---------VAKEGK------KCEYIII 147
Query: 193 YEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 230
YEDKD DWMLVGDVPW+MF +SCKRLRI+K S+A G
Sbjct: 148 YEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATGFG 185
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 93/171 (54%), Gaps = 26/171 (15%)
Query: 87 PPAKAQVVGWPPVRSYRKNIMANQ------KNNSDEGEKSL----------------SAA 124
P + +QVVGWPP+ S+R N + N + + G+K +
Sbjct: 71 PRSSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG 130
Query: 125 FVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLL 184
F+KV MDG RKVDL + SY+ L+ L MF G G F +L+D
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQ--FTKPLRLLD-- 186
Query: 185 NSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAME 235
SSE+V TYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GLA R E
Sbjct: 187 GSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE 237
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 96/182 (52%), Gaps = 31/182 (17%)
Query: 79 STIKDPAKPPAKAQVVGWPPVRSYRKNIMANQ------KNNSDEGEKSL----------- 121
S+ A PP +QVVGWPP+ +R N + N + +GEK +
Sbjct: 56 SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSM 115
Query: 122 -------SAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDF 174
FVKV MDG RKVD++ + SY+ L+ L +MF +G G
Sbjct: 116 KVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF-------FGMTGTTCR 168
Query: 175 MNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAM 234
L L SS++V TYEDK+GDWMLVGDVPW MF++S KRLRIM SEA GLAPR
Sbjct: 169 EKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAPRRQ 228
Query: 235 EK 236
E+
Sbjct: 229 EQ 230
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 93/159 (58%), Gaps = 22/159 (13%)
Query: 91 AQVVGWPPVRSYRKNIMANQ------------------KNNSDEGEKSLSAAFVKVCMDG 132
QVVGWPP+R+YR N M NQ KN SD K ++ FVKV MDG
Sbjct: 87 GQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDS-TKMRNSMFVKVTMDG 145
Query: 133 APYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLN-SSEYVP 191
P RK+DL +K Y+ LS+ L +MF +G+ + D E+ + L + SS V
Sbjct: 146 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLE--TDGHMETPVKILPDGSSGLVL 203
Query: 192 TYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 230
TYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G A
Sbjct: 204 TYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 92/157 (58%), Gaps = 22/157 (14%)
Query: 91 AQVVGWPPVRSYRKNIMANQ------------------KNNSDEGEKSLSAAFVKVCMDG 132
QVVGWPP+R+YR N M NQ KN SD K ++ FVKV MDG
Sbjct: 87 GQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSD-STKMRNSMFVKVTMDG 145
Query: 133 APYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLN-SSEYVP 191
P RK+DL +K Y+ LS+ L +MF +G+ + D E+ + L + SS V
Sbjct: 146 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLE--TDGHMETPVKILPDGSSGLVL 203
Query: 192 TYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIG 228
TYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G
Sbjct: 204 TYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 120/230 (52%), Gaps = 33/230 (14%)
Query: 16 KETELCLGLPGGGKTEVETPKATGKRGFAETVDLKLNLQAKDGVMDLNENIKNASKDKNH 75
K+ EL LG PGG E + K+ E ++K + K N N + S
Sbjct: 36 KKLELRLGPPGGD----EEDHSAIKKKNTEIRNIKKETEDKS-FHCFNGNHFSPSNKTTS 90
Query: 76 LPTSTIKDPAKPPAKAQVVGWPPVRSYRKNIMAN-------------QKNNSDEGEKSLS 122
+P + K A P VVGWPPVRS+RKN+ + Q N SD+GEK +
Sbjct: 91 VPHISQKRTAPGP----VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVE 146
Query: 123 AA----FVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMI-DFMNE 177
FVK+ MDG P RKVDL Y SY++LS + K+F G AQ I D E
Sbjct: 147 TKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFR----GLLAAQRDISDGQGE 202
Query: 178 SK-LMDLLNS-SEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSE 225
K ++ LL+ E+ TYED +GD MLVGDVPW+MFV S KRLR++K SE
Sbjct: 203 EKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 85/168 (50%), Gaps = 33/168 (19%)
Query: 94 VGWPPVRSYRKNIMANQ-KNNSDEG--------------------------EKSLSAAFV 126
VGWPP+R+YR N + NQ K+ + EG + S ++ V
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 127 KVCMDGAPYLRKVDLKMYKSYQELSDALAKMF----SSFTMGNYGAQGMIDFMNESKLMD 182
KV MDG RKVDL SY L L MF S T N I SKL+D
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLLD 214
Query: 183 LLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLA 230
SSEY+ TY+DKDGDWMLVGDVPW+MF+ S RLRIMK S G+
Sbjct: 215 --GSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGVG 260
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 33/192 (17%)
Query: 65 NIKNASKDKNHL--------PTSTIKDPAKPPAKAQVVGWPPVRSYRKNI-------MAN 109
++K KDK+ L P+ST K A VVGWPPVRS+RKN+ + N
Sbjct: 61 HMKKEPKDKSILSLAGKYFSPSSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGN 120
Query: 110 QKNNSD----EGEKSLSAA-----------FVKVCMDGAPYLRKVDLKMYKSYQELSDAL 154
S+ + +K +AA FVK+ M G P RKVDL + SY++LS +
Sbjct: 121 DSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTV 180
Query: 155 AKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSS-EYVPTYEDKDGDWMLVGDVPWEMFVD 213
K+F I+ +E + LL+ + EY TYED +GD MLVGDVPW+MFV
Sbjct: 181 DKLFRGLLAAQRDFPSSIE--DEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVS 238
Query: 214 SCKRLRIMKGSE 225
S KRLR++K SE
Sbjct: 239 SVKRLRVIKTSE 250
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 81/143 (56%), Gaps = 20/143 (13%)
Query: 91 AQVVGWPPVRSYRKNIMAN-QKNNSDEGEKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQE 149
A VVGWPPVRS R+N+ A ++ + +VK+ M+G P RKV+L Y +YQ+
Sbjct: 47 APVVGWPPVRSSRRNLTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQ 106
Query: 150 LSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWE 209
LS A+ ++FS + DL + +Y YED +GD +LVGDVPWE
Sbjct: 107 LSHAVDQLFS-----------------KKDSWDL--NRQYTLVYEDTEGDKVLVGDVPWE 147
Query: 210 MFVDSCKRLRIMKGSEAIGLAPR 232
MFV + KRL ++K S A L+PR
Sbjct: 148 MFVSTVKRLHVLKTSHAFSLSPR 170
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 22/140 (15%)
Query: 84 PAKPPAKAQVVGWPPVRSYRKNIMANQKNNSDEGEKSLSAAFVKVCMDGAPYLRKVDLKM 143
P+ P + WPP++S ++ + ++ + SL FVKV M+G P RK+DL +
Sbjct: 36 PSTSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSL---FVKVYMEGVPIGRKLDLCV 92
Query: 144 YKSYQELSDALAKMF-SSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWML 202
+ Y+ L + L+ MF +S GN + +V TYEDKDGDWM+
Sbjct: 93 FSGYESLLENLSHMFDTSIICGNR------------------DRKHHVLTYEDKDGDWMM 134
Query: 203 VGDVPWEMFVDSCKRLRIMK 222
VGD+PW+MF+++ +RL+I +
Sbjct: 135 VGDIPWDMFLETVRRLKITR 154
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 13/103 (12%)
Query: 120 SLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESK 179
S+ + +VKV M+G P RK+DL Y++L L MF++ + ++
Sbjct: 81 SVGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASIL-------------WAE 127
Query: 180 LMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK 222
D+ N +V TY DK+GDWM+VGDVPWEMF+ + +RL+I +
Sbjct: 128 EEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISR 170
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
Query: 119 KSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNES 178
S+ + +VKV M+G P RK+DL Y +L L MF++ + +
Sbjct: 78 NSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASIL-------------WA 124
Query: 179 KLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK 222
+ D+ + +V TY DK+GDWM+VGDVPWEMF+ S +RL+I +
Sbjct: 125 EEEDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID
INDUCIBLE 29); transcription factor |
chr4:15583479-15584628 FORWARD
Length = 251
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 64/219 (29%)
Query: 50 KLNLQAKDGVMDLNENI---KNASKDKNHLPTSTIKDPAKPPA---------KAQVVGWP 97
KL +A G+ ++ EN K N P +DP + + ++VVGWP
Sbjct: 40 KLRFEATFGLGNVEENCYMPKQRLFALNGQPNEEDEDPLESESSIVYDDEEENSEVVGWP 99
Query: 98 PVR-------SYR----------------KNIMANQKNNSDEGEKSLSAA---------- 124
PV+ SY + I A N S+ ++ ++
Sbjct: 100 PVKTCMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSS 159
Query: 125 -FVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDL 183
+VKV MDG RKVD+K++ SY+ L+++L MF+ + D E
Sbjct: 160 MYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYE----------DCDRE------ 203
Query: 184 LNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMK 222
+ Y T++ K+GDW+L GDV W++F +S R+ I++
Sbjct: 204 --DTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID
INDUCIBLE 32); transcription factor | chr2:118385-119219
FORWARD
Length = 191
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 110 QKNNSDEGEKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQ 169
Q ++EGE A+VKV +DG RKV L +Y L+ L MF T+
Sbjct: 85 QGYYNNEGESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTV-----S 139
Query: 170 GMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAI 227
G+ F ES E+ Y D++G W VGDVPW+ FV+S R+RI + ++A+
Sbjct: 140 GLRLFQTES---------EFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDAL 188
>AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID
INDUCIBLE 34); transcription factor |
chr1:5182256-5183243 REVERSE
Length = 185
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 108 ANQKNNSDEGEKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYG 167
+ Q+ S+EG + +VKV MDG RKV + + SY L+ L MF G
Sbjct: 78 SGQRYCSNEGYRR-KWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMF-----GMQS 131
Query: 168 AQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAI 227
G+ F ES E+ Y D++G W GDVPW F++S +RLRI + ++A+
Sbjct: 132 VSGLRLFQMES---------EFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDAV 182
>AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241375 FORWARD
Length = 173
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 24/108 (22%)
Query: 79 STIKDPAKPPAKAQVVGWPPVRSYRKNIMANQ------KNNSDEGEKSL----------- 121
S+ A PP +QVVGWPP+ +R N + N + +GEK +
Sbjct: 56 SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSM 115
Query: 122 -------SAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFT 162
FVKV MDG RKVD++ + SY+ L+ L +MF T
Sbjct: 116 KVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMT 163
>AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 602
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 19/113 (16%)
Query: 114 SDEGEKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMID 173
S++ ++ S + KV M G R VDL + KSY EL D L +MF QG
Sbjct: 480 SEQKKQQTSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFE--------IQG--- 528
Query: 174 FMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA 226
LL +++ + D +GD ML GD PW F K++ I E
Sbjct: 529 --------QLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEV 573
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 118 EKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNE 177
+ S + + KV M G P R VDL K Y EL D + K+F D E
Sbjct: 516 QSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLF--------------DIKGE 561
Query: 178 SKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAP 231
L + +++ + D +GD MLVGD PW F + KR+ I E + P
Sbjct: 562 -----LRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 610
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 19/114 (16%)
Query: 118 EKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNE 177
+ S + + KV M G P R VDL K Y EL D + K+F D E
Sbjct: 518 QSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLF--------------DIKGE 563
Query: 178 SKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAP 231
L + +++ + D +GD MLVGD PW F + KR+ I E + P
Sbjct: 564 -----LRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 612
>AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID
INDUCIBLE 33); transcription factor |
chr5:23270024-23270959 FORWARD
Length = 171
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 130 MDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSE- 188
++G +++ L + SYQ L+ AL +MF +D + + +DL N+
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMF-------------VDGADSTDDLDLSNAIPG 125
Query: 189 YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIM 221
++ YED + D +L GD+ W+ FV KR+RI+
Sbjct: 126 HLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 109 NQKNNSDEGEKSLSA-AFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYG 167
N N+ E ++ S + +KV M G R VDL + +SY EL L KMF
Sbjct: 388 NSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-------- 439
Query: 168 AQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA 226
+G +L ++ + D +GD MLVGD PW F K+L I E
Sbjct: 440 IEG-----------ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 487
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 109 NQKNNSDEGEKSLSA-AFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYG 167
N N+ E ++ S + +KV M G R VDL + +SY EL L KMF
Sbjct: 475 NSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-------- 526
Query: 168 AQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA 226
+G +L ++ + D +GD MLVGD PW F K+L I E
Sbjct: 527 IEG-----------ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 574
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 109 NQKNNSDEGEKSLSA-AFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYG 167
N N+ E ++ S + +KV M G R VDL + +SY EL L KMF
Sbjct: 496 NSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-------- 547
Query: 168 AQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEA 226
+G +L ++ + D +GD MLVGD PW F K+L I E
Sbjct: 548 IEG-----------ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEV 595
>AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 935
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Query: 118 EKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNE 177
E S FVKV G+ + R +D+ + SY EL LA+MF E
Sbjct: 791 ENPQSNTFVKVYKSGS-FGRSLDISKFSSYHELRSELARMFGL----------------E 833
Query: 178 SKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAME 235
+L D + S + + D++ D +L+GD PW FV S ++I+ E + R +E
Sbjct: 834 GQLEDPVRSG-WQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLE 890
>AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 933
Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 18/118 (15%)
Query: 118 EKSLSAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNE 177
E S FVKV G+ + R +D+ + SY EL LA+MF E
Sbjct: 789 ENPQSNTFVKVYKSGS-FGRSLDISKFSSYHELRSELARMFGL----------------E 831
Query: 178 SKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAME 235
+L D + S + + D++ D +L+GD PW FV S ++I+ E + R +E
Sbjct: 832 GQLEDPVRSG-WQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLE 888
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/
transcription regulator | chr5:7016704-7021504 REVERSE
Length = 1150
Score = 47.8 bits (112), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 137 RKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDK 196
R +D+ Y+ Y EL LA+MF G +G ++ +S++ Y D
Sbjct: 1051 RSIDVNRYRGYDELRHDLARMF--------GIEGQLEDPQ---------TSDWKLVYVDH 1093
Query: 197 DGDWMLVGDVPWEMFVDSCKRLRIMKGSE 225
+ D +LVGD PWE FV+ + ++I+ +E
Sbjct: 1094 ENDILLVGDDPWEEFVNCVQSIKILSSAE 1122
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1164
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 137 RKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDK 196
R +D+ Y+ Y EL LA+MF G +G ++ +S++ Y D
Sbjct: 1050 RSIDVNRYRGYDELRHDLARMF--------GIEGQLEDPQ---------TSDWKLVYVDH 1092
Query: 197 DGDWMLVGDVPWEMFVDSCKRLRIMKGSE 225
+ D +LVGD PWE FV+ + ++I+ +E
Sbjct: 1093 ENDILLVGDDPWEEFVNCVQSIKILSSAE 1121
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription
activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1165
Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 17/89 (19%)
Query: 137 RKVDLKMYKSYQELSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDK 196
R +D+ Y+ Y EL LA+MF G +G ++ +S++ Y D
Sbjct: 1051 RSIDVNRYRGYDELRHDLARMF--------GIEGQLEDPQ---------TSDWKLVYVDH 1093
Query: 197 DGDWMLVGDVPWEMFVDSCKRLRIMKGSE 225
+ D +LVGD PWE FV+ + ++I+ +E
Sbjct: 1094 ENDILLVGDDPWEEFVNCVQSIKILSSAE 1122