Jatropha Genome Database
- JcCB0063521.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0063521.10 - phase: 0 /pseudo
(273 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52320.1 | Symbols: | F-box family protein | chr3:19403020-1... 77 1e-14
AT3G10430.1 | Symbols: | F-box family protein | chr3:3242750-32... 74 1e-13
AT3G49450.1 | Symbols: | F-box family protein | chr3:18337305-1... 74 1e-13
AT4G19940.1 | Symbols: | F-box family protein | chr4:10806195-1... 73 2e-13
AT3G16210.1 | Symbols: | F-box family protein | chr3:5494533-54... 72 4e-13
AT1G47790.1 | Symbols: | F-box family protein | chr1:17600004-1... 67 1e-11
AT1G70960.1 | Symbols: | F-box family protein | chr1:26756253-2... 67 2e-11
AT5G49610.1 | Symbols: | F-box family protein | chr5:20131448-2... 65 3e-11
AT1G32420.1 | Symbols: | F-box family protein | chr1:11701995-1... 64 7e-11
AT4G21240.1 | Symbols: | F-box family protein | chr4:11322411-1... 64 7e-11
AT2G40910.2 | Symbols: | F-box protein-related | chr2:17069938-... 64 9e-11
AT3G08750.1 | Symbols: | F-box family protein | chr3:2656716-26... 64 9e-11
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 64 1e-10
AT2G40910.1 | Symbols: | F-box protein-related | chr2:17069938-... 64 1e-10
AT3G47150.1 | Symbols: | F-box family protein | chr3:17358591-1... 63 2e-10
AT1G12870.1 | Symbols: | S locus F-box-related / SLF-related | ... 63 2e-10
AT5G22791.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 63 3e-10
AT5G62510.1 | Symbols: | F-box family protein | chr5:25095373-2... 62 4e-10
AT3G07870.1 | Symbols: | F-box family protein | chr3:2510871-25... 62 5e-10
AT5G62660.1 | Symbols: | F-box family protein | chr5:25156326-2... 61 6e-10
AT4G38870.1 | Symbols: | F-box family protein | chr4:18132583-1... 61 6e-10
AT2G43260.1 | Symbols: | F-box family protein / S locus-related... 60 1e-09
AT3G23880.1 | Symbols: | F-box family protein | chr3:8622061-86... 60 1e-09
AT3G17500.1 | Symbols: | F-box family protein | chr3:5986685-59... 60 1e-09
AT4G09190.1 | Symbols: | F-box family protein | chr4:5855176-58... 60 1e-09
AT1G11270.2 | Symbols: | F-box family protein | chr1:3785715-37... 60 2e-09
AT1G11270.1 | Symbols: | F-box family protein | chr1:3785715-37... 60 2e-09
AT4G12560.2 | Symbols: | F-box family protein | chr4:7441815-74... 59 3e-09
AT4G12560.1 | Symbols: | F-box family protein | chr4:7441815-74... 59 3e-09
AT3G10240.1 | Symbols: | F-box protein-related | chr3:3166698-3... 59 3e-09
AT5G65850.1 | Symbols: | F-box family protein | chr5:26346317-2... 59 5e-09
AT2G40925.1 | Symbols: | F-box family protein | chr2:17074905-1... 58 5e-09
AT1G53550.1 | Symbols: | F-box family protein | chr1:19983411-1... 58 6e-09
AT1G70380.1 | Symbols: | F-box family protein | chr1:26526212-2... 58 7e-09
AT1G30790.1 | Symbols: | F-box family protein | chr1:10932713-1... 57 8e-09
AT1G47730.1 | Symbols: | F-box family protein | chr1:17563931-1... 57 9e-09
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-1... 57 1e-08
AT3G21410.1 | Symbols: | F-box family protein (FBW1) | chr3:753... 57 1e-08
AT5G52610.1 | Symbols: | F-box family protein | chr5:21346423-2... 57 1e-08
AT3G51171.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-08
AT5G18160.1 | Symbols: | F-box family protein | chr5:6002770-60... 56 2e-08
AT1G32660.1 | Symbols: | F-box family protein | chr1:11811040-1... 56 2e-08
AT2G04920.1 | Symbols: | F-box family protein (FBX9) | chr2:172... 56 3e-08
AT3G61340.1 | Symbols: | F-box family protein | chr3:22701215-2... 56 3e-08
AT4G04690.1 | Symbols: | F-box family protein (FBX15) | chr4:23... 55 5e-08
AT5G50220.1 | Symbols: | F-box family protein | chr5:20446068-2... 54 8e-08
AT1G13200.1 | Symbols: | F-box family protein | chr1:4507221-45... 54 9e-08
AT1G53815.1 | Symbols: | F-box family protein | chr1:20090249-2... 54 1e-07
AT1G47390.1 | Symbols: | F-box family protein | chr1:17379544-1... 54 1e-07
AT5G44220.1 | Symbols: | F-box family protein | chr5:17810477-1... 53 2e-07
AT1G62270.1 | Symbols: | F-box family protein | chr1:23004499-2... 53 2e-07
AT1G32600.1 | Symbols: | F-box family protein-related | chr1:11... 53 2e-07
AT3G04660.1 | Symbols: | F-box family protein | chr3:1264794-12... 53 2e-07
AT2G31470.1 | Symbols: | F-box family protein | chr2:13407492-1... 52 3e-07
AT3G17480.1 | Symbols: | F-box family protein | chr3:5983199-59... 52 4e-07
AT2G16810.1 | Symbols: | F-box family protein (FBX8) | chr2:728... 52 4e-07
AT2G43270.1 | Symbols: | F-box family protein | chr2:17988207-1... 52 6e-07
AT3G47030.1 | Symbols: | F-box family protein | chr3:17322171-1... 51 6e-07
AT1G11270.3 | Symbols: | F-box family protein | chr1:3785833-37... 51 6e-07
AT1G47765.1 | Symbols: | F-box family protein | chr1:17574906-1... 50 1e-06
AT2G43440.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 1e-06
AT1G12170.1 | Symbols: | F-box family protein | chr1:4128607-41... 50 2e-06
AT1G32430.1 | Symbols: | F-box family protein | chr1:11704932-1... 50 2e-06
AT1G71320.1 | Symbols: | S locus F-box-related / SLF-related | ... 49 3e-06
AT1G54640.1 | Symbols: | F-box family protein-related | chr1:20... 49 3e-06
AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483... 49 3e-06
AT3G59610.1 | Symbols: | F-box family protein / jacalin lectin ... 48 7e-06
AT1G67130.1 | Symbols: | F-box family protein | chr1:25099262-2... 48 8e-06
>AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 390
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 42/259 (16%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
+P+++ IDIL LP KSLMRFKCVSK W + I S F ++ FK + L Y+
Sbjct: 27 IPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFA--YLVDRE 84
Query: 69 DDLVELFLD----------ETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNP 118
+ L L +T + QH +PI L G+ C G + NP
Sbjct: 85 NQSKYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIMGGYLVNAARGLLCYRTGRRVKVCNP 144
Query: 119 ATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVI-------QGFLSEYHF 171
+T+++ LP +K ++ FG DP + +KVL + Q + H
Sbjct: 145 STRQIVELPIMRSKTNV---------WNWFGHDPFHDEYKVLSLFWEVTKEQTVVRSEH- 194
Query: 172 FAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNR 231
QV++ G + WR + P S+ + +GV Y+ A + +
Sbjct: 195 --QVLVLGVGAS-WRNTKSHHTPHRPFHPYSRGMTI---------DGVLYYSARTDANRC 242
Query: 232 IL-SFHMSNDEFQEIQVPY 249
+L SF +S++EF I++P+
Sbjct: 243 VLMSFDLSSEEFNLIELPF 261
>AT3G10430.1 | Symbols: | F-box family protein |
chr3:3242750-3243862 REVERSE
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 110/249 (44%), Gaps = 36/249 (14%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSD-FISQHFKKKNSCHLLVHYYVS-P 66
LP DL ++IL P +SL+RFK K W I + F+ +H K L +
Sbjct: 5 LPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFLRIENRERVQ 64
Query: 67 YADDLVELFLDETL-EDLSHQHFGLPIPFSKLHGPCNGI---FCVSD-GS--SYALWNPA 119
D + E+ T+ +L H++F L +H C+G+ C + GS + A+WNP
Sbjct: 65 ILDPVTEILAVSTIPNELRHKYFTL------IH--CDGLMLGMCYEELGSDPNLAVWNPV 116
Query: 120 TKELQHLPATLAKPSLPVPLTSGGDICGFGLDP-ITNNFKVLVIQ--GFLSEYHFFAQVM 176
++++ + KPS P+ G D GFG D +N+K+L G + + +
Sbjct: 117 MRKIKWI-----KPSPPLVCYWGSDYLGFGYDKTFRDNYKILRFTYLGDDDDDESYPKCQ 171
Query: 177 LHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNRILSFH 236
++ F + WR +E D + D V S +NG YW+ N ILSF
Sbjct: 172 IYEFNSGSWRSIEAKFDGEI-------DVEVDGVS----VNGSMYWIELQEKKNFILSFD 220
Query: 237 MSNDEFQEI 245
S + F I
Sbjct: 221 FSKETFNRI 229
>AT3G49450.1 | Symbols: | F-box family protein |
chr3:18337305-18338498 REVERSE
Length = 397
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 47/260 (18%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSC--HLLV------ 60
LP DL ++IL+ +P KS RF+CVS W + +RS +++ F K++S HLL+
Sbjct: 32 LPTDLMVEILSRVPAKSAARFRCVSNDWNSLLRSP-YLTNLFLKRSSARPHLLITFQAEG 90
Query: 61 --------HYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNG-IFCVSDGS 111
Y +S +LV +D ++ FG+ +P L N + +
Sbjct: 91 KWSFFSSPEYLISDQNSNLV--VVDNHMDVPKDYSFGVCVPVCGLMCTSNEWVLSRKRDA 148
Query: 112 SYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHF 171
+ NP+T + + LP + G I G +PI +KVL + + F
Sbjct: 149 RMMICNPSTGQFKSLPKVRS--------CRGNVITYIGYNPIEKQYKVLCMTIREKPFKF 200
Query: 172 FA---QVMLHTFGTNVWRELEIGQD-YSLPHGTLSQDYVVTSSSCYTFLNGVHYWLA--S 225
A QV+ G WR LE D Y HG++ +NGV ++LA S
Sbjct: 201 KAEEHQVLTLGTGKLKWRMLECSVDHYPYYHGSIC-------------INGVLFYLAMKS 247
Query: 226 HNFDNRILSFHMSNDEFQEI 245
+ + +SFHM ++ F I
Sbjct: 248 ESKEYMTVSFHMKDENFMFI 267
>AT4G19940.1 | Symbols: | F-box family protein |
chr4:10806195-10807430 FORWARD
Length = 411
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 125/287 (43%), Gaps = 43/287 (14%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFK------------KKNSC 56
+P DL I+ILT LP KSLMRFK VSK W + I S +F ++ K ++
Sbjct: 35 IPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCLSSSDNS 94
Query: 57 HL---LVHYYVSPYAD-DLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSS 112
HL L+ P +D + +D+ L + + + F G+ C+ SS
Sbjct: 95 HLKTVLLSLSSPPDSDITMSSSVIDQDLTMPGMKGYQISHVF-------RGLMCLVKKSS 147
Query: 113 YALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLS----E 168
++N T++L LP L S + G DP+ + +KV+ I S E
Sbjct: 148 AQIYNTTTRQLVVLPDIEESTILAEEHKSKKIMYHIGHDPVYDQYKVVCIVSRASDEVEE 207
Query: 169 YHFFAQ---VMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLAS 225
Y F ++ ++L G+ WR +I Y PH L Q T +HY
Sbjct: 208 YTFLSEHWVLLLEGEGSRRWR--KISCKYP-PHVPLGQG--------LTLSGRMHYLAWV 256
Query: 226 HNFDNRILS-FHMSNDEFQEIQVPYYSLYATHETLVIYH*LIALLLY 271
DNR+L F ++EF +QVP ++ + L+ Y IA+L Y
Sbjct: 257 RVSDNRVLVIFDTHSEEFSMLQVP-GDIFWKYNGLLEYGGKIAILNY 302
>AT3G16210.1 | Symbols: | F-box family protein |
chr3:5494533-5495615 REVERSE
Length = 360
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 50/279 (17%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
LP++LAI+IL L +K L RF+CV K+W I F ++ ++ + + Y + Y
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGF-TETYRDMSPAKFVSFYDKNFYM 63
Query: 69 DDL----------VELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVS-DGSSYALWN 117
D+ ++ LD+++ D S LH C+G CV+ + +WN
Sbjct: 64 LDVEGKHPVITNKLDFPLDQSMIDEST---------CVLH--CDGTLCVTLKNHTLMVWN 112
Query: 118 PATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFL--SEYHFFAQV 175
P +K+ + +P P + +I GFG DP+ +++KV+ L S H F
Sbjct: 113 PFSKQFKIVP----NPG----IYQDSNILGFGYDPVHDDYKVVTFIDRLDVSTAHVFE-- 162
Query: 176 MLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNR-ILS 234
F T W E + Y H + TFL+ YW+A + +R IL
Sbjct: 163 ----FRTGSWGE-SLRISYPDWHYRDRRG---------TFLDQYLYWIAYRSSADRFILC 208
Query: 235 FHMSNDEFQEIQVPYYSLYATHETLVIYH*LIALLLYEM 273
F++S E++++ +P Y+ T L + + + YEM
Sbjct: 209 FNLSTHEYRKLPLPVYNQGVTSSWLGVTSQKLCITEYEM 247
>AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 389
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 51/273 (18%)
Query: 1 MASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQH----------- 49
+ S + P DLA +IL LPVKS++RF+CVSK W + I FI +
Sbjct: 17 LQSKPTSSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLL 76
Query: 50 FKKKNSCHLLV-----HYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGI 104
F K S L V H+Y S + +D L Q F P P +H G+
Sbjct: 77 FCFKQSDKLFVFSIPKHHYDSNSSSQAA---IDRFQVKLP-QEFSYPSPTESVH----GL 128
Query: 105 FCVSDGSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGF-GLDPITNNFKVLVIQ 163
C ++ +WNP+ ++ +LP P S ++ F G DPI KV+ +
Sbjct: 129 ICFHVLATVIVWNPSMRQFL---------TLPKPRKSWKELTVFLGYDPIEGKHKVVCLP 179
Query: 164 GFLSEYHFFAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWL 223
+ QV+ WR ++ + + T + C + GV Y++
Sbjct: 180 RNRTCDE--CQVLTLGSAQKSWRTVKTKHKHRSTNDTWGR--------C---IKGVVYYI 226
Query: 224 ASHNFDNR---ILSFHMSNDEFQEIQVPYYSLY 253
A + + R I+SFH+ +++F I++P ++Y
Sbjct: 227 A-YVYHTRVWCIMSFHVKSEKFDMIKLPLENIY 258
>AT1G70960.1 | Symbols: | F-box family protein |
chr1:26756253-26757362 FORWARD
Length = 369
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 48/276 (17%)
Query: 1 MASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRS----SDFISQHFKKKNSC 56
M + S LP+ + ++IL+ +P+K LM+F CVSK W + IR D++ Q K+
Sbjct: 1 MVNTSFETLPRHMQMEILSRVPLKFLMKFMCVSKKWASIIRGEEFREDYLFQSMKRPRVL 60
Query: 57 HLLVHYYVSPYADDLVELFLDETLEDL------SHQHFGLPIPFSKLHGPCNGIFCVSDG 110
++ H P + F ED + P ++ P G+ C
Sbjct: 61 FVIDHREYLPIKPEA--FFHSVYQEDQPLLLSGKQRMRTFETPLVQVFQPIRGLICQQGY 118
Query: 111 SSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVI----QGFL 166
+ NP K+ + LP P+ FG D + FKVL I G
Sbjct: 119 GKIVICNPGLKKFRSLPQIKVHKGAPMR-------TFFGYDEDKDVFKVLCITWLRNGKR 171
Query: 167 SEYHFFAQVMLHTFGTN----VWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYW 222
SE + +++T G++ WR + D H +++ F GV Y+
Sbjct: 172 SEVS--KEYLVYTMGSDEESSSWRLITCEHD----HAPVTEG---------LFKGGVLYY 216
Query: 223 LA-SHNFDNRILSFHMSNDEFQEIQV-----PYYSL 252
A S+N + ++SF++++++F I++ PY+ L
Sbjct: 217 GAKSNNGKSVVMSFNVNSEDFSVIELEVEISPYWRL 252
>AT5G49610.1 | Symbols: | F-box family protein |
chr5:20131448-20132527 REVERSE
Length = 359
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 1 MASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV 60
M + + P ++ + IL LPVKSL RFK V KSW + S + + F + + L+
Sbjct: 1 MDNQKGALFPDEVILQILARLPVKSLFRFKSVCKSW-YRLPSDKYFTSLFNQLSVKEQLL 59
Query: 61 HYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVS---DGSSYALWN 117
VS D L + L +S ++ NG+ C S + Y + N
Sbjct: 60 VAEVS----DSSSLICVDNLRGVSELSLDFVRDRVRIRVSSNGLLCCSSIPEKGVYYVCN 115
Query: 118 PATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHF-FAQVM 176
P+T+E + LP + +P + G D N F V+ L+ YH F Q
Sbjct: 116 PSTREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVV-----LAGYHRSFGQRP 170
Query: 177 LHTF-------GTNVWRE-LEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNF 228
+F +N WR+ + + ++ S H +S++ VV F+NG+ +WL S
Sbjct: 171 DGSFICLVFDSESNKWRKFVSVLEECSFTH--MSKNQVV-------FVNGMLHWLMSGLC 221
Query: 229 DNRILSFHMSNDEFQEIQVP 248
IL+ + +D +++I +P
Sbjct: 222 --YILALDVEHDVWRKISLP 239
>AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 302
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 56/290 (19%)
Query: 2 ASNSQNI-LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRS-SDFISQHFKKKNSCHLL 59
S N+ +P DL ++IL LP KSL+RF+CVSK W + I S DFI ++
Sbjct: 29 GEKSGNVNIPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDS---------IV 79
Query: 60 VHYYVSPYADDLVELFLDETLEDLSH------------QHFGLPIPFSKLHGPCNGIFCV 107
P D+ +F + L H L S H I C
Sbjct: 80 TRSLTQPPPRDIKLIFHHQVLYPGPHFFIFSSTYPQNTDKESLTTRASSYHYVRGLICCW 139
Query: 108 SD-GSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFL 166
S ++ ++NP T++ +P T + + C FG DP+ N +KV+V+ +
Sbjct: 140 SHCPTTVDIYNPTTRQYYTVPDTNRYQYI--------ETCFFGYDPVENQYKVMVLPKYY 191
Query: 167 SEYHFFAQVMLHTFGTNV---WRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWL 223
E + + T G + WR+++ + +++ + C +NGV Y+
Sbjct: 192 MEE---SPCQVFTVGDPIEKPWRDIQ----------GIGVHFLLKDAVC---INGVIYYQ 235
Query: 224 ASHNFDNR--ILSFHMSNDEFQEIQVPYYSLYATHE-TLVIYH*LIALLL 270
A++ + + ++SF + +++F ++ P + H TL+ Y + L++
Sbjct: 236 ATNEYGSTYFLVSFDVRSEKFNHVKAP--KILTDHPCTLINYQGKLGLIM 283
>AT4G21240.1 | Symbols: | F-box family protein |
chr4:11322411-11323664 FORWARD
Length = 417
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 111/258 (43%), Gaps = 37/258 (14%)
Query: 8 ILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPY 67
++P D+ DIL LP KS +RF+ VSK W + FI + F +S L + V
Sbjct: 35 LIPLDMIPDILLRLPAKSAVRFRIVSKLWLSITTRPYFI-RSFAFPSSTRLCLMACVK-- 91
Query: 68 ADDLVELFLDETLEDLSHQHFG---LPIPFSKLHGP----CNGIFCVSDGSSYALWNPAT 120
A D+ +D S+ H + P + P NG+ C D + +WNP+
Sbjct: 92 ARDMRLFISLHQHDDGSYAHVDRCEIKSPKHDYYNPSSESVNGLVCFGDFYNIVVWNPSM 151
Query: 121 KELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQVMLHTF 180
++ LP ++ + S C G DP+ + +KVL I G+ + H ++ T
Sbjct: 152 RQHVTLPEPKPHSTVRYFIRS----C-LGYDPVEDKYKVLSISGYHNGNH---DPLVFTL 203
Query: 181 G-TNVWRELEIGQ-DYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLAS--------HNFDN 230
G WR ++ D LP G S T +NG Y+ A NF+N
Sbjct: 204 GPQESWRVIQNSPLDIPLPTG---------GSRVGTCINGHVYYEAQIRFKVDDIFNFEN 254
Query: 231 RILSFHMSNDEFQEIQVP 248
++SF + ++F I+ P
Sbjct: 255 ILMSFDVRYEKFNTIKKP 272
>AT2G40910.2 | Symbols: | F-box protein-related |
chr2:17069938-17071501 REVERSE
Length = 442
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 35/256 (13%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHF---KKKNSCHLLVHYYVS 65
+P DL ++I+ LP KS++RFKC+SK W + I F + F +K H +H +
Sbjct: 62 IPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPH--IHMCLV 119
Query: 66 PYADDLVELFLDETLEDLSHQHFGLPIPFSKLHG----PCNGIFCVSDGSSYALWNPATK 121
+ V L L T D + + + + G G+ C S ++NP T+
Sbjct: 120 DHGGQRVLLSLSSTSPDNTCYVVDQDLSLTGMGGFFLNLVRGLLCFSVREKACIYNPTTR 179
Query: 122 ELQHLPATLAKPSLPVPLTSGGDICGF-GLDPITNNFKVLVIQGFLSEYHFFAQV----- 175
+ LPA K + DI + G DP+ + +K++ G S FF +
Sbjct: 180 QRLTLPAI--KSDIIALKDERKDIRYYIGHDPVNDQYKLVCTIGISSA--FFTNLKSEHW 235
Query: 176 --MLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNG-VHYWLASHNFDN-R 231
+L G+ WR++ + Y PH S+ F+NG V Y++A + D
Sbjct: 236 VFVLEAGGS--WRKVRTLESYH-PHA---------PSTVGQFINGSVVYYMAWLDMDTCA 283
Query: 232 ILSFHMSNDEFQEIQV 247
++SF ++++E I V
Sbjct: 284 VVSFDITSEELTTIIV 299
>AT3G08750.1 | Symbols: | F-box family protein |
chr3:2656716-2657825 REVERSE
Length = 369
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 30/250 (12%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
LP +L +IL +P +SL+RFK K W I F+ H S + Y
Sbjct: 12 LPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHL-DHYSPERFIRTYDQQII 70
Query: 69 DDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIF---CVSDGSSYALWNPATKELQH 125
D + E+ D + D + PI +S +H C+G+ C +S A+WNP +E++
Sbjct: 71 DPVTEILSDALIPDEFRDLY--PI-YSMVH--CDGLMLCTCRKWDNSLAVWNPVLREIKW 125
Query: 126 LPATLAKPSLPVPLTSGGDICGFGLDP--ITNNFKVLVIQGFL-SEYHFFAQVMLHTFGT 182
+ KPS+ T D G G D +N+K+L + G L + ++ F +
Sbjct: 126 I-----KPSVCYLHT---DYVGIGYDDNVSRDNYKILKLLGRLPKDDDSDPNCEIYEFKS 177
Query: 183 NVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNRILSFHMSNDEF 242
+ W+ L D+ + D + + G YW+A D I+ F S + F
Sbjct: 178 DSWKTLVAKFDWDI-------DIRCNNG---VSVKGKMYWIAKKKEDFTIIRFDFSTETF 227
Query: 243 QEIQVPYYSL 252
+EI V Y+L
Sbjct: 228 KEICVCPYTL 237
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD
Length = 441
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 104/249 (41%), Gaps = 37/249 (14%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHF----KKKNSCHLLVHYYV 64
LP L +IL LPVK L+R K +SK W + I S +H KK + +
Sbjct: 97 LPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVER 156
Query: 65 SPYADDLVELFLDETLEDL--SHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALW--NPAT 120
S ++ F + + S L +P G CNG+ CV + S ++ NP T
Sbjct: 157 STSKSICIKFFSRRSGMNAINSDSDDLLRVP-----GSCNGLVCVYELDSVYIYLLNPMT 211
Query: 121 KELQHL-PATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQVMLHT 179
+ L P K S+ GFG+D +T +KV+V+ GF ++
Sbjct: 212 GVTRTLTPPRGTKLSV-----------GFGIDVVTGTYKVMVLYGFDR-----VGTVVFD 255
Query: 180 FGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNRILSFHMSN 239
TN WR Q Y G + + T F+NG +WL + +F + IL +
Sbjct: 256 LDTNKWR-----QRYKTA-GPMPLSCIPTPERNPVFVNGSLFWLLASDF-SEILVMDLHT 308
Query: 240 DEFQEIQVP 248
++F+ + P
Sbjct: 309 EKFRTLSQP 317
>AT2G40910.1 | Symbols: | F-box protein-related |
chr2:17069938-17071554 REVERSE
Length = 449
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 35/256 (13%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHF---KKKNSCHLLVHYYVS 65
+P DL ++I+ LP KS++RFKC+SK W + I F + F +K H +H +
Sbjct: 69 IPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPH--IHMCLV 126
Query: 66 PYADDLVELFLDETLEDLSHQHFGLPIPFSKLHG----PCNGIFCVSDGSSYALWNPATK 121
+ V L L T D + + + + G G+ C S ++NP T+
Sbjct: 127 DHGGQRVLLSLSSTSPDNTCYVVDQDLSLTGMGGFFLNLVRGLLCFSVREKACIYNPTTR 186
Query: 122 ELQHLPATLAKPSLPVPLTSGGDICGF-GLDPITNNFKVLVIQGFLSEYHFFAQV----- 175
+ LPA K + DI + G DP+ + +K++ G S FF +
Sbjct: 187 QRLTLPAI--KSDIIALKDERKDIRYYIGHDPVNDQYKLVCTIGISSA--FFTNLKSEHW 242
Query: 176 --MLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNG-VHYWLASHNFDN-R 231
+L G+ WR++ + Y PH S+ F+NG V Y++A + D
Sbjct: 243 VFVLEAGGS--WRKVRTLESYH-PHA---------PSTVGQFINGSVVYYMAWLDMDTCA 290
Query: 232 ILSFHMSNDEFQEIQV 247
++SF ++++E I V
Sbjct: 291 VVSFDITSEELTTIIV 306
>AT3G47150.1 | Symbols: | F-box family protein |
chr3:17358591-17359765 FORWARD
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 3 SNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSC---HLL 59
+ +Q +P DL I+IL LPVKSL+RF+CVSK WC+ I S DF ++HF +S LL
Sbjct: 6 NTTQIYIPLDLQINILLRLPVKSLLRFRCVSKLWCSIITSHDFRNRHFNITSSSAPPRLL 65
Query: 60 VHYYVSPYADDLVELFLDETL-------------EDLSHQHFGLPIPFSKLHGPCNGIFC 106
+ + Y + L+ + +DLS + I K++ G+ C
Sbjct: 66 IAFQ-DFYGEKLLLVSSPNPNVSSSSTSSCCVPYKDLSK----VEINGRKVYNAVWGLTC 120
Query: 107 VSDGSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQG 164
+ NP+T+EL P K P + G D I + +KVL I
Sbjct: 121 FESRLKVGICNPSTRELHMFPQIKFK---NYPDIFPCIMYFLGYDRIEDQYKVLAIDN 175
>AT1G12870.1 | Symbols: | S locus F-box-related / SLF-related |
chr1:4387129-4389110 REVERSE
Length = 416
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 110/267 (41%), Gaps = 34/267 (12%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHL---LVHYYVS 65
LP D+ +I LPVK+LMRFK +SK W +T+ S F +H K H+ V
Sbjct: 33 LPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDHPKVMIITE 92
Query: 66 PYADDLVELFLDETLED---LSHQHFGLPIPFSKLHGP------CNGIFCVSDGSSYALW 116
+ D+ F +LE LS F P F H P C+GIFC+ + ++
Sbjct: 93 KWNPDIEISFRTISLESVSFLSSALFNFPRGF---HHPIYASESCDGIFCIHSPKTQDIY 149
Query: 117 --NPATKELQHLPATLAKP---SLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHF 171
NPAT+ + LP + L L + D+ ++ + S+
Sbjct: 150 VVNPATRWFRQLPPARFQIFMHKLNPTLDTLRDMIPVNHLAFVKATDYKLVWLYNSDASR 209
Query: 172 FAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLA-SHNFDN 230
+ + F N WR L Y + H D S+ NG YW ++N +
Sbjct: 210 VTKCEVFDFKANAWRYLTCIPSYRIYH-----DQKPASA------NGTLYWFTETYNAEI 258
Query: 231 RILSFHMSNDEFQEIQVPYYSLYATHE 257
++++ + + F+ + P SL A+ E
Sbjct: 259 KVIALDIHTEIFRLLPKP--SLIASSE 283
>AT5G22791.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
type 3 (InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT1G30790.1). |
chr5:7603579-7604771 REVERSE
Length = 355
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 26/142 (18%)
Query: 2 ASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV- 60
A NS +P DL ++I++ LP K ++RF+ VSK W +TIRS +F + + L
Sbjct: 15 AGNSSTNIPFDLTLEIVSRLPAKPIIRFQAVSKLWFSTIRSKNFTDSFLTRSKTRPRLFF 74
Query: 61 ---HY-------YVSPYADD-----LVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIF 105
H+ + +P D+ V D T+ D+++ LP+ NG+F
Sbjct: 75 TFKHFDSRKRFIFSAPERDNNDKSSTVVARHDMTISDVAYIR-SLPV---------NGLF 124
Query: 106 CVSDGSSYALWNPATKELQHLP 127
C + G S A+ NP T+++ LP
Sbjct: 125 CYTRGDSIAVCNPTTRQIVKLP 146
>AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE
Length = 420
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 62/271 (22%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHF------------------ 50
+P DL I+ILT LP KSLMRFKCVSK W + IRS F +++
Sbjct: 44 IPLDLLIEILTRLPHKSLMRFKCVSKQWSSLIRSRFFSNRYLTVASPLRPHRLYISLVDH 103
Query: 51 --KKKNSCHLLVHYYVSPYADDLVELFLDETL-EDLSHQHFGLPIPFSKLHGPCNGIFCV 107
+ CH SP L+ + +DL+ + L G I C
Sbjct: 104 KCDSREVCH-------SPRESVLLSFSSPSSFDQDLTTMQGMGGLHMVTLRGLILYIVC- 155
Query: 108 SDGSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLV------ 161
L+NP T++ LPA K ++ V + G DP+ + +KV+
Sbjct: 156 ---GKACLYNPTTRQSVTLPAI--KFNIFVQGNEHSLLYFLGHDPVLDQYKVVCTFVSSS 210
Query: 162 ---IQGFLSEYHFFAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNG 218
++ +SE+ F +L G+ W+ +E Q PH T + + G
Sbjct: 211 SQDLETIISEHWVF---VLEVGGS--WKRIEFDQ----PH---------TPTRSGLCIGG 252
Query: 219 VHYWLA-SHNFDNRILSFHMSNDEFQEIQVP 248
V Y+LA + F + +++F + ++EF IQ P
Sbjct: 253 VIYYLAFTSMFQDIVVTFDVRSEEFNIIQAP 283
>AT3G07870.1 | Symbols: | F-box family protein |
chr3:2510871-2512124 FORWARD
Length = 417
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 25/258 (9%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
LP+D+ DI + LP+ S+ R V +SW + + +S LL+H SP
Sbjct: 28 LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLH-CDSPIR 86
Query: 69 DDLVELFLDETLEDLSHQHFGL----PIPFSKLHGPCNGIFCVSD---GSSYALWNPATK 121
+ L L L E + + + F L +P + G CNG+ C+SD S L+NP T
Sbjct: 87 NGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPFTT 146
Query: 122 ELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSE-------YHFFAQ 174
LP K + GFG +T +KVL I F Y +
Sbjct: 147 NSLELPECSNK------YHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGR 200
Query: 175 VMLHTFGTNVWRELEIGQDYSLPHGTLSQD-YVVTSSSCYTFLNGVHYWLA---SHNFDN 230
+ + D SL +L + Y S +NG +++ H D
Sbjct: 201 IQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPDR 260
Query: 231 RILSFHMSNDEFQEIQVP 248
+ +SF + ++EF+EI P
Sbjct: 261 KFVSFDLEDEEFKEIPKP 278
>AT5G62660.1 | Symbols: | F-box family protein |
chr5:25156326-25157465 REVERSE
Length = 379
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 115/270 (42%), Gaps = 59/270 (21%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNS------------- 55
+P DL I+ILT LP KSLMRFKCVSK W + IRS F + + K
Sbjct: 41 IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDH 100
Query: 56 --CH-LLVHYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSS 112
C+ L+V +Y + ++L+ G + G+ +
Sbjct: 101 LLCNSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMG-----GRNMVVLRGLILYVVCRT 155
Query: 113 YALWNPATKELQHLPAT----LAKPSLPVPLTSGGDICGFGLDPITNNFKVLV------- 161
+++NP T++ LPA LA+ S L + FG DP+ + +KV+
Sbjct: 156 ASIYNPTTRQSVTLPAVKSNILAQKSHWNSL-----LYFFGYDPVLDQYKVVCTVALFSK 210
Query: 162 -IQGFLSEYHFFAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVH 220
++ SE+ F +L G+ W+ +E Q PH V NGV
Sbjct: 211 RLKRITSEHWVF---VLEPGGS--WKRIEFDQ----PHLPTRLGLCV---------NGVI 252
Query: 221 YWLASHNFDNR--ILSFHMSNDEFQEIQVP 248
Y+LAS + R ++SF + ++EF IQ P
Sbjct: 253 YYLAS-TWKRRDIVVSFDVRSEEFSMIQGP 281
>AT4G38870.1 | Symbols: | F-box family protein |
chr4:18132583-18133863 REVERSE
Length = 426
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 54/298 (18%)
Query: 2 ASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRS----SDFISQHFKKKNSCH 57
S + +LP DL ++IL L +K L+RF CVSK W + IR F+++ K+ S
Sbjct: 46 VSVNSELLPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKRPKS-- 103
Query: 58 LLVHYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPC------------NGIF 105
L+ + + L T E S + H C +G+
Sbjct: 104 LVFVFRAQSLGSIFSSVHLKSTREISSSSSSSSASSIT-YHVTCYTQQRMTISPSVHGLI 162
Query: 106 CVSDGSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICG--FGLDPITNNFKVLVIQ 163
C SS ++NP T+ LP + +G G DP+ N+KV+ I
Sbjct: 163 CYGPPSSLVIYNPCTRRSITLPK----------IKAGRRAINQYIGYDPLDGNYKVVCIT 212
Query: 164 GFL----SEYHFFAQVMLHTFGT--NVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLN 217
+ + ++ + T GT + WR + D PH +S++ + N
Sbjct: 213 RGMPMLRNRRGLAEEIQVLTLGTRDSSWRMI---HDIIPPHSPVSEELCI---------N 260
Query: 218 GVHYWLA---SHNFDNRILSFHMSNDEFQEIQVPYYSLYATHETLVIYH*LIALLLYE 272
GV Y+ A + ++ I+SF + +++F I+VP + + L Y +A++ YE
Sbjct: 261 GVLYYRAFIGTKLNESAIMSFDVRSEKFDLIKVPCN--FRSFSKLAKYEGKLAVIFYE 316
>AT2G43260.1 | Symbols: | F-box family protein / S locus-related |
chr2:17983744-17985089 REVERSE
Length = 420
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 23/233 (9%)
Query: 24 KSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYADDLVELFLDETLEDL 83
KS+++ + VSK W + + SS F +H +NS ++ Y L E+ +
Sbjct: 28 KSILKCRIVSKQWRSLLESSRFAERHMSLQNSRRRILAAYNCDCGGR--RKLLPESRFEG 85
Query: 84 SHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNPATKELQHLPATLA-----KPSLPVP 138
+ L S+ C G+ C + + NP+T +L+ P+ L + L
Sbjct: 86 DEEIVYLHCDASRPSMTCQGVICFPEQDWIIVLNPSTSQLRRFPSGLNHNCRFRIGLWKT 145
Query: 139 LTSGGDICGFGLDPITNNFKVLVIQ---GFLSEYHFFAQVMLHTFGTNVWRELEIGQDYS 195
+ G + GFG D + +KV+ + + + + + T WR+L
Sbjct: 146 FSPGNWVMGFGRDKVNGRYKVVRMSFAFWRVRQEEPVVECGVLDVDTGEWRKLS------ 199
Query: 196 LPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNRILSFHMSNDEFQEIQVP 248
YVV S +NG YWL RIL+ + +EF ++ VP
Sbjct: 200 ------PPPYVVNVGSKSVCVNGSIYWLHIQTV-YRILALDLHKEEFHKVPVP 245
>AT3G23880.1 | Symbols: | F-box family protein |
chr3:8622061-8623155 REVERSE
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 38/258 (14%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
LP ++ +IL LPVKSL RFKCV SW + I + F +H + SPY
Sbjct: 14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTK-SPYG 72
Query: 69 DDLVE-----------LFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFC--VSDGSSYAL 115
L+ T+ H L + ++ G C+G+ C V S L
Sbjct: 73 VITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKSLYL 132
Query: 116 WNPATKELQHLPATLAKPSLPVPLTSGGDIC----GFGLDPITNNFKVLVIQGFLSEYHF 171
WNP K Q L ++ L + D C GFG D +++KV+ + +
Sbjct: 133 WNPTIKLQQRLSSS--------DLETSDDECVVTYGFGYDESEDDYKVVAL--LQQRHQV 182
Query: 172 FAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNG-VHYWLASHNFDN 230
+ +++ +WR + S P G + D S ++NG +++ S +
Sbjct: 183 KIETKIYSTRQKLWR-----SNTSFPSGVVVAD----KSRSGIYINGTLNWAATSSSSSW 233
Query: 231 RILSFHMSNDEFQEIQVP 248
I+S+ MS DEF+E+ P
Sbjct: 234 TIISYDMSRDEFKELPGP 251
>AT3G17500.1 | Symbols: | F-box family protein |
chr3:5986685-5988498 FORWARD
Length = 438
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 46/279 (16%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQH---FKKKNSCHLLVHYYVS 65
LP DL +IL+ +P SL R + KSW + F +H K+ +L VS
Sbjct: 4 LPLDLVEEILSRVPATSLKRLRSTCKSWNNCYKDQRFTEKHSVIAAKQFLVLMLKDCRVS 63
Query: 66 PYADDLVELFLDETLEDLSHQHFGLP-IPFSKLHGP---------CNG-IFCVSDGSSYA 114
+ +L E+ H + P I + GP C+G + C +
Sbjct: 64 SVSVNLNEI----------HNNIAAPSIELKGVVGPQMQISGIFHCDGLLLCTTKDDRLE 113
Query: 115 LWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQ 174
+WNP T + + + ++ T+ + G+ + +++K+L F + ++
Sbjct: 114 VWNPCTGQTRRVQHSIHYK------TNSEFVLGYVNNNSRHSYKILRYWNFYMSNYRVSE 167
Query: 175 VMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFD--NRI 232
++ F ++ WR ++ Y L G +S L G YWLAS + I
Sbjct: 168 FEIYDFSSDSWRFIDEVNPYCLTEGEVS-------------LKGNTYWLASDEKRDIDLI 214
Query: 233 LSFHMSNDEFQEIQVPY-YSLYATHETLVIYH*LIALLL 270
L F S + +Q + +P S Y T V+ +++LL
Sbjct: 215 LRFDFSIERYQRLNLPILKSDYETEALSVVREKQLSVLL 253
>AT4G09190.1 | Symbols: | F-box family protein |
chr4:5855176-5856327 FORWARD
Length = 383
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 54/267 (20%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNS---CHLLV----- 60
+P DL ++I++ LP KS++RF+ VSK W + I + DF S + S C LL+
Sbjct: 22 IPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVTRSLSSRPCVLLIFQKHD 81
Query: 61 --HYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNG----IFCVSDGSSYA 114
++ SP + +T ++ ++F IP + C I+ + +
Sbjct: 82 KLFFFASP-------VHQKKTCPNV--ENFQYTIPNNGKLQRCESVHGLIYLETSTNVMF 132
Query: 115 LWNPATKELQHLPATLAKPSLPVPLTSGGDICGF-GLDPITNNFKVLVIQGFLSEYHFFA 173
+ NP TK LP +K P + GF G DPI +KVL I L E +
Sbjct: 133 IRNPITKSFFTLPKLDSKEGRP--------LTGFLGYDPINGKYKVLCI---LKERN--- 178
Query: 174 QVMLHTFGTN-VWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNR- 231
++ + T G WR L G LS V + C ++GV Y+ S R
Sbjct: 179 KIGILTLGAQESWR--------ILSKGFLSHYKVTGYAKC---IDGVIYYEGSFGDGLRQ 227
Query: 232 ---ILSFHMSNDEFQEIQVPYYSLYAT 255
I+SF + +++F I+ P S AT
Sbjct: 228 ELAIMSFDLRSEKFSLIKHPKKSSIAT 254
>AT1G11270.2 | Symbols: | F-box family protein |
chr1:3785715-3786653 REVERSE
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 8 ILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPY 67
+LP D+ IL LPV+SL+RFKCVS W +TI SQ F+++ L+ S
Sbjct: 34 LLPHDVVGLILERLPVESLLRFKCVSNQWKSTIE-----SQCFQERQ----LIRRMESRG 84
Query: 68 ADDLVELFLDETLEDLSHQHFGLPI----PFSKLH-----GPCNGIFCV-SDGSSYALWN 117
D LV F D+ + FG I F LH G C G+ C+ S + N
Sbjct: 85 PDVLVVSFADDEDKYGRKAVFGSSIVSTFRFPTLHTLICYGSCEGLICIYCVYSPNIVVN 144
Query: 118 PATKELQHLPATLAKPSL-----------PVPLTSGGDICGFGLDPITNNFKVLVIQGFL 166
PATK + P + + L P P + FG D + +K + +
Sbjct: 145 PATKWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLA------FGKDKLNGTYKQVWLYNS- 197
Query: 167 SEYHF--FAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLA 224
SE+ + F N WR + Y + QD V + +G +WL
Sbjct: 198 SEFRLDDVTTCEVFDFSNNAWRYVHPASPYRIND---YQDPV--------YSDGSVHWL- 245
Query: 225 SHNFDNRILSFHMSNDEFQ 243
+ +++ILSFH+ + FQ
Sbjct: 246 TEGKESKILSFHLHTETFQ 264
>AT1G11270.1 | Symbols: | F-box family protein |
chr1:3785715-3786653 REVERSE
Length = 312
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 108/259 (41%), Gaps = 51/259 (19%)
Query: 8 ILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPY 67
+LP D+ IL LPV+SL+RFKCVS W +TI SQ F+++ L+ S
Sbjct: 34 LLPHDVVGLILERLPVESLLRFKCVSNQWKSTIE-----SQCFQERQ----LIRRMESRG 84
Query: 68 ADDLVELFLDETLEDLSHQHFGLPI----PFSKLH-----GPCNGIFCV-SDGSSYALWN 117
D LV F D+ + FG I F LH G C G+ C+ S + N
Sbjct: 85 PDVLVVSFADDEDKYGRKAVFGSSIVSTFRFPTLHTLICYGSCEGLICIYCVYSPNIVVN 144
Query: 118 PATKELQHLPATLAKPSL-----------PVPLTSGGDICGFGLDPITNNFKVLVIQGFL 166
PATK + P + + L P P + FG D + +K + +
Sbjct: 145 PATKWHRSCPLSNLQQFLDDKFEKKEYDFPTPKLA------FGKDKLNGTYKQVWLYNS- 197
Query: 167 SEYHF--FAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLA 224
SE+ + F N WR + Y + QD V + +G +WL
Sbjct: 198 SEFRLDDVTTCEVFDFSNNAWRYVHPASPYRIND---YQDPV--------YSDGSVHWL- 245
Query: 225 SHNFDNRILSFHMSNDEFQ 243
+ +++ILSFH+ + FQ
Sbjct: 246 TEGKESKILSFHLHTETFQ 264
>AT4G12560.2 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 25/196 (12%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKK--KNSCHLLV--HYYV 64
+P D+ DI LP K+L+R + +SK I DFI H + + HL++ +
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGAL 63
Query: 65 SPYADDLVELFLDETLEDLSH-QHFGLPIPFSKLHGPCNGIFCVSDG-SSYALWNPATKE 122
Y+ DL L +++ D+ H G P +++ G NG+ +S+ + A++NP+T++
Sbjct: 64 RLYSVDLDSL---DSVSDVEHPMKRGGP---TEVFGSSNGLIGLSNSPTDLAVFNPSTRQ 117
Query: 123 LQHLPATLAKPSLPVP---LTSGGDICGFGLDPITNNFKVLVIQGFLSEYH------FFA 173
+ LP + S+ +P T G G G D +++++KV+ + F + F
Sbjct: 118 IHRLPPS----SIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPY 173
Query: 174 QVMLHTFGTNVWRELE 189
+V + + N W+ +E
Sbjct: 174 EVKVFSLKKNSWKRIE 189
>AT4G12560.1 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 413
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 25/196 (12%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKK--KNSCHLLV--HYYV 64
+P D+ DI LP K+L+R + +SK I DFI H + + HL++ +
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGAL 63
Query: 65 SPYADDLVELFLDETLEDLSH-QHFGLPIPFSKLHGPCNGIFCVSDG-SSYALWNPATKE 122
Y+ DL L +++ D+ H G P +++ G NG+ +S+ + A++NP+T++
Sbjct: 64 RLYSVDLDSL---DSVSDVEHPMKRGGP---TEVFGSSNGLIGLSNSPTDLAVFNPSTRQ 117
Query: 123 LQHLPATLAKPSLPVP---LTSGGDICGFGLDPITNNFKVLVIQGFLSEYH------FFA 173
+ LP + S+ +P T G G G D +++++KV+ + F + F
Sbjct: 118 IHRLPPS----SIDLPDGSSTRGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPY 173
Query: 174 QVMLHTFGTNVWRELE 189
+V + + N W+ +E
Sbjct: 174 EVKVFSLKKNSWKRIE 189
>AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 389
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 37/229 (16%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV------HY 62
+P DL +IL LP KS+ RF+CVSK W + FI+ S LL+ +
Sbjct: 27 IPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFIN--LLTTRSPRLLLCFKANEKF 84
Query: 63 YVS--PYADDLVELFLDE----TLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALW 116
+VS P E + L D H F + + NG+ C + + +W
Sbjct: 85 FVSSIPQHRQTFETWNKSHSYSQLIDRYHMEFSEEMNYFPPTESVNGLICFQESARLIVW 144
Query: 117 NPATKELQHLPATLAKPSLPVPLTSGGDICGF-GLDPITNNFKVLVIQGFLSEYHFFAQV 175
NP+T++L LP P + D+ F G DP+ KV+ ++ S + +V
Sbjct: 145 NPSTRQLLILPK---------PNGNSNDLTIFLGYDPVEGKHKVMCME--FSATYDTCRV 193
Query: 176 MLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLA 224
+ +WR ++ H DY S C +NGV Y +A
Sbjct: 194 LTLGSAQKLWRTVKT-------HNKHRSDY-YDSGRC---INGVVYHIA 231
>AT5G65850.1 | Symbols: | F-box family protein |
chr5:26346317-26347495 FORWARD
Length = 392
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 56/283 (19%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKK-NSCHLL-------- 59
+P D+ I+IL LP KS+ +CVSK W + I DF + + LL
Sbjct: 35 IPVDIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELFLTRSLHRPQLLFCCKKDGN 94
Query: 60 VHYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNPA 119
+ ++ SP + E +S ++F L S+ P NG+ C
Sbjct: 95 LFFFSSPQLQNPY-----ENSSAISLKNFSLCYKISR---PVNGLICFKR---------- 136
Query: 120 TKELQHLPATLAKP------SLPVPL-TSGGDICGFGLDPITNNFKVLVIQGFLSEYHFF 172
KE+ + P SLP P+ TS G F +PI FKVL+ + S+ H
Sbjct: 137 -KEMNETVTVICNPSTGHTLSLPKPMKTSIGPSRFFVYEPIQKQFKVLL--SYKSDEH-- 191
Query: 173 AQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASH--NFDN 230
QV+ G WR +E S+PH + S C +NGV Y+ A + + D
Sbjct: 192 -QVLTLGTGELSWRIIEC----SMPH------ILGMSEIC---INGVLYYPAINLSSGDY 237
Query: 231 RILSFHMSNDEFQEIQVPYYSLYATHE-TLVIYH*LIALLLYE 272
I+ F + +++F+ I V + A H+ TL+ Y+ +A L+ E
Sbjct: 238 IIVCFDVRSEKFRFITVMEEFIKAAHDGTLINYNGKLASLVSE 280
>AT2G40925.1 | Symbols: | F-box family protein |
chr2:17074905-17076116 REVERSE
Length = 403
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 18/162 (11%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFK-KKNSCHLLVHYYVSPY 67
+P DL I+IL LP KS MRFKCVSK W I F ++ F Y+
Sbjct: 27 IPPDLMIEILIRLPTKSFMRFKCVSKQWSPLISGRYFCNRLFTCVTRQQQQQPRLYMCLV 86
Query: 68 ADDLVELFLDETLED-----LSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNPATKE 122
A D + L T D L Q +P F G+ C G+ ++NP+TK+
Sbjct: 87 AKDKQCVLLSSTSPDNTCFVLVDQDLSIPGYF---FASVPGLLCFQFGTKACIYNPSTKQ 143
Query: 123 LQHLPATLAKPSLPVPLTSGGDICG----FGLDPITNNFKVL 160
L LP+ + + G + G DP+ + +K++
Sbjct: 144 LLTLPSVKSDIT-----AQQGQLKTTQYYIGRDPVNDQYKLV 180
>AT1G53550.1 | Symbols: | F-box family protein |
chr1:19983411-19984637 FORWARD
Length = 408
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 43/255 (16%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSC--HLLVHYYVSP 66
+P DL I+IL+ L ++ + R +CVSK W + IR ++ +Q F K+S LL + V+
Sbjct: 35 IPVDLVINILSRLSLECIARCRCVSKLWSSIIRRPNY-NQLFPVKSSATPRLLFVFKVAR 93
Query: 67 YADDLVELFLDETLEDLSHQHFGL---------PIPFSKLHGPCNGIFC---VSDGSSYA 114
ELF + + + + + L FS+L P +G+ C + + +A
Sbjct: 94 ------ELFFNSSPQHFNPNNSSLVATSLQKTSSTRFSQLCRPVHGLICSQHIEENYLFA 147
Query: 115 LW-NPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFA 173
L NP T E LP + + FG DPI FKVL I H ++
Sbjct: 148 LISNPTTGEYIALPKQRMEEMNSETIIEKVRY-SFGYDPIDKQFKVLRITWLHRGSHEWS 206
Query: 174 ---QVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDN 230
QV+ FG WR + + H L + +NGV Y+ A DN
Sbjct: 207 SEYQVLTLGFGNISWRNTQC----CVVHYLLEDSGIC--------INGVLYYPA--RLDN 252
Query: 231 R---ILSFHMSNDEF 242
R I+ F + ++F
Sbjct: 253 RKYTIVCFDVMTEKF 267
>AT1G70380.1 | Symbols: | F-box family protein |
chr1:26526212-26527345 REVERSE
Length = 377
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 55/297 (18%)
Query: 1 MASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV 60
M + S L D+ I+IL LP+K LMR CVSK W + IR DF S + + + L+
Sbjct: 1 MVNTSFETLALDMQIEILARLPLKYLMRCMCVSKKWASLIRGEDFRSAYLLRSMARPRLL 60
Query: 61 HYYVSPYADDLVE------------LFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVS 108
+V+ + L L + L+ H P + P G+ C
Sbjct: 61 --FVASRSRKFTRETCFHSVYQEPPLLLSGKRQMLTDNHIA---PVFTVSNPILGLLCHQ 115
Query: 109 D-GSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICG-FGLDPITNNFKVLVI---- 162
+ + NP K+ ++L P + VP G + FG D + FKVL +
Sbjct: 116 GYNNEIVICNPGLKKFRNL------PQIQVP--EGASVRSFFGYDKVDKVFKVLCVCVPQ 167
Query: 163 ----QGFLS----EYHFFAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYT 214
G+ S +Y + H + WR + D+S VVT +
Sbjct: 168 TQFGAGWTSKEPKKYQVYTVRSDHE-KPSFWRPIICNDDHS----------VVTDEGLF- 215
Query: 215 FLNGVHYWLASHNFDNR--ILSFHMSNDEFQEIQVPYYSLYATHETLVIYH*LIALL 269
NG + + + N+ ++ F++S++ F I++P H LV Y +AL+
Sbjct: 216 --NGGFLYYGARSSCNKPMVMRFNVSSEAFAVIKLPEEVDIDYHWRLVNYKGKVALV 270
>AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 399
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 55/271 (20%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFK-KKNSCHLLVHYYVSPY 67
+P DL ++ILT LP KSLM+FKCVSK W + I + FI + +V + +
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSF 68
Query: 68 -ADDLVELF------------------LDETLEDLSHQHFGLPIPFSKLHGPC---NGIF 105
+D LF LD T+ L+ + L C NG
Sbjct: 69 PSDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSN--------NLASRCISVNGFI 120
Query: 106 CVSDGSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVL-VIQG 164
S + + + NP+T+++ LP PS P I G DP+ + FK L +I
Sbjct: 121 ACSLYTRFTICNPSTRQVIVLPIL---PSGRAPDMRSTCI---GYDPVDDQFKALALISS 174
Query: 165 FLSEYHFFAQVMLHTFGTN----VWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVH 220
+ + ++ T + WR+++ G + P+ VT C +NGV
Sbjct: 175 CIPNKDSTVEHLVLTLKGDKKNYSWRQIQ-GNNNIPPYSP------VTMRVC---INGVV 224
Query: 221 Y---WLASHNFDNRILSFHMSNDEFQEIQVP 248
Y W + + I+ F + +++ I+ P
Sbjct: 225 YYGAWTPRQSMNAVIVCFDVRSEKITFIKTP 255
>AT1G47730.1 | Symbols: | F-box family protein |
chr1:17563931-17565106 REVERSE
Length = 391
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 30/252 (11%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVH------Y 62
LP DL +I + LP KS++RF+CVSK W ++I ++ + + F+ + +
Sbjct: 25 LPLDLTSEIFSRLPAKSVVRFRCVSKLW-SSITTAPYFTNSFETRPNLMFFFKEGDKFFV 83
Query: 63 YVSPYAD---DLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNPA 119
+ P + + + + D H + + L +G+ C ++ +WNP
Sbjct: 84 FTIPQHNQNPNESYSYSSSEIIDSYHTTYPKRCCVTTLTESVHGLICFRKAATPIIWNPT 143
Query: 120 TKELQHLPATLAK-PSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQVMLH 178
++ + L + ++ V L G DP+ KV+ + + F + +
Sbjct: 144 MRKFKPLRKLDERWKNIKVSL---------GYDPVDGKHKVVC----MPYGNAFYECRVL 190
Query: 179 TFGTNV-WRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNRILSFHM 237
T G++ WR ++ S P T S C +NGV Y+ A N ILSF +
Sbjct: 191 TLGSDQEWRTVKTNHKNS-PF-TFHGGVCYRQSRC---INGVIYYRADTNSGRVILSFDV 245
Query: 238 SNDEFQEIQVPY 249
++ F I++P+
Sbjct: 246 RSERFDVIELPW 257
>AT1G30920.1 | Symbols: | F-box family protein |
chr1:11004242-11005444 REVERSE
Length = 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 113/263 (42%), Gaps = 42/263 (15%)
Query: 2 ASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSC-HLLV 60
+ + + +P DL +DIL+ LP KS+ R +CVSK W + IR S F + +S HLL+
Sbjct: 3 SEENTDSIPIDLILDILSRLPSKSIARCRCVSKLWESMIRQSYFTELFLTRSSSRPHLLI 62
Query: 61 --------HYYVSPYADDLV---ELFLDETL-----EDLSHQHFGLPIPFSKLHGPCNGI 104
++ P + + L + L ED QH G S ++ P I
Sbjct: 63 AVEQEGEWKFFSLPQPKNYLGKSSLVVAANLHLKFFEDKRPQH-GCSYASSLIYFPNMTI 121
Query: 105 FCVSDGSSYALWNPATKELQH--LPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVI 162
D + NP+T + + LP L S+P G GF DPI FKVL+
Sbjct: 122 RKKGDDHLGVICNPSTGQYGYVILPPLLDFKSVPY-----GKFLGF--DPIDKQFKVLIP 174
Query: 163 QGFLSEYHFFAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYW 222
++ ++ T WR+++ Y LPH S+ +NG+ Y+
Sbjct: 175 IFDFDKHQTDHHILTLGAETVGWRKIQSPLRY-LPH-----------SNGTICINGILYY 222
Query: 223 LASHNF---DNRILSFHMSNDEF 242
LA N+ N ++ F + ++ F
Sbjct: 223 LAKINYAMDKNVLVCFDVRSENF 245
>AT3G21410.1 | Symbols: | F-box family protein (FBW1) |
chr3:7536719-7537951 REVERSE
Length = 410
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 47/260 (18%)
Query: 1 MASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV 60
M S ++LP +L +IL +P KSL+R K K W A FI +H LV
Sbjct: 30 MDSKECSLLPFELFEEILCRVPTKSLLRLKLTCKRWLALFNDKRFIYKHLA-------LV 82
Query: 61 HYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHG------PCNGIF-CVSDGSSY 113
++ + +V++ ++ + S F LP F ++ G PC+G+ C+ + S
Sbjct: 83 REHII-RTNQMVKI-INPVVGACSS--FSLPNKF-QVKGEIYTMVPCDGLLLCIFETGSM 137
Query: 114 ALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPIT-NNFKVL-VIQGFLSEYHF 171
A+WNP +++ + L PS G G G D ++ +++K+L + G ++ +
Sbjct: 138 AVWNPCLNQVRWI--FLLNPSF-----RGCSCYGIGYDGLSRDSYKILRFVNGVFTKNEY 190
Query: 172 F------AQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLAS 225
+V ++ +N W+ ++ D+ +VV + L G YW+A
Sbjct: 191 ANTGSYKPEVDIYELKSNSWKTFKVSLDW----------HVVLRCKGLS-LKGNMYWIAK 239
Query: 226 HNF--DNRILSFHMSNDEFQ 243
N D I SF+ S + F+
Sbjct: 240 WNRKPDIFIQSFNFSTETFE 259
>AT5G52610.1 | Symbols: | F-box family protein |
chr5:21346423-21347478 REVERSE
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 112/271 (41%), Gaps = 34/271 (12%)
Query: 8 ILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPY 67
++ +DL ++IL LPVK L R CV K W IRS FI+ + + ++ V + +
Sbjct: 1 MISEDLLVEILLRLPVKPLARCLCVCKLWATIIRSRYFINLYQSRSSTRQPYVMFALRDI 60
Query: 68 ADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNPATKELQHLP 127
F + L + S NG+ CV S + NPAT++ +P
Sbjct: 61 FTSCRWHFFSSSQPSLVTKATCSANNSSHTPDCVNGLICVEYMSQLWISNPATRKGVLVP 120
Query: 128 ATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQVMLHTF---GTNV 184
+ G DPI +KVL F S+ + + L F G
Sbjct: 121 QSAPHQKFRKWY--------MGYDPINYQYKVL----FFSKQYLLSPYKLEVFTLEGQGS 168
Query: 185 WRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNRILSFHMSNDEFQE 244
W+ +E+ ++P + T C ++GV Y+ A R++ F+++ ++F +
Sbjct: 169 WKMIEVE---NIPSPS-------TRGIC---IDGVVYYGAQTAHGLRLVRFYVATEKFGD 215
Query: 245 -IQVP-----YYSLYATHETLVIYH*LIALL 269
I++P Y + + LV Y +ALL
Sbjct: 216 FIEIPVGASNVYDMNFGYSKLVNYQGKLALL 246
>AT3G51171.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G16555.1); Has
537 Blast hits to 535 proteins in 15 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 537;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:19010856-19011626 FORWARD
Length = 256
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 40/233 (17%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSP-Y 67
LP +L DIL+ L +SL+RF+ V K W FI HF + +C + S Y
Sbjct: 4 LPWELEEDILSRLAAQSLVRFRSVCKRWNYLFDEKSFIKNHFAR--ACPQFIFMTDSNIY 61
Query: 68 ADDLVEL-FLDETLEDLSHQHFGLPIPFSKLH----GPCNG-IFCVSDGS--SYALWNPA 119
+ +++ L +D T++ G+P K C+G +FC S S A WNP
Sbjct: 62 SIEIIGLDGVDPTIKLRVLDSSGIPYRDWKFAYITITACDGFLFCNSWASPKGTAFWNPW 121
Query: 120 TKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFL-------SEYHFF 172
K+++ + G ++CG G D T + KV I G+L S Y +
Sbjct: 122 LKQVKWIEYE----------DKGFNVCGLGYDN-TRDGKVYKILGYLMCRPEDGSSYVYH 170
Query: 173 AQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTF-LNGVHYWLA 224
+V ++ ++ ++ +EI ++D+ +T + ++ LNG YWL+
Sbjct: 171 QRVAIYDCASHAFKFIEIS----------NKDWFLTDVTRFSVSLNGNLYWLS 213
>AT5G18160.1 | Symbols: | F-box family protein |
chr5:6002770-6003909 FORWARD
Length = 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 111/256 (43%), Gaps = 48/256 (18%)
Query: 7 NILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNS--CHLLVHYYV 64
N +P D+ I+IL+ LP KS++R + VSK W + + +FI +H KK S C LL+
Sbjct: 32 NSIPLDITIEILSRLPAKSIVRSRSVSKLWSSITTTPEFI-KHRSKKTSPPCVLLIFR-- 88
Query: 65 SPYADDLVELFLDETLEDLSH-QHFGLPIP---FSKLHGPCNGIFCVSDGSSYALWNPAT 120
D L+ + SH Q + + IP F + +G+ C+ + NP
Sbjct: 89 --KHDKLIVFSSPQHQNTYSHVQDYHIEIPKNGFIRRLDSVHGLICLEGSKQLVICNPTL 146
Query: 121 KELQHLPATLAKPSLPVPLTSGGD--ICGF-GLDPITNNFKVL-VIQGFLSEYHFFAQVM 176
K P LP P +G + + GF G +PI +K L +++G+ + QV+
Sbjct: 147 KRF--FP-------LPEPQGTGDEYNVGGFLGYEPIEGKYKALCIVRGWNT------QVL 191
Query: 177 LHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDN----RI 232
LEI + + + + + C +NGV Y+ A FD I
Sbjct: 192 T----------LEIQESWRVTKPGYTHWPTKDTGRC---INGVIYYKAII-FDRVPRHVI 237
Query: 233 LSFHMSNDEFQEIQVP 248
F + +EF I+ P
Sbjct: 238 FGFDLRYEEFTHIEFP 253
>AT1G32660.1 | Symbols: | F-box family protein |
chr1:11811040-11812380 FORWARD
Length = 446
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 48/272 (17%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFK-KKNSCHLLVHYYVSPY 67
LP DL + ILT +P KSLM+ +CVSK W + IRS FI ++ +V + +
Sbjct: 63 LPLDLKMAILTRIPAKSLMKLRCVSKMWSSIIRSRGFIDSYYAISSKQSRFIVGLSNAAF 122
Query: 68 ADDLVEL--FLDETLEDLSHQHFGLPIPFSKLHGPCN------------GIFCVSDGSSY 113
+ +L + ED +P ++ PC+ GI V
Sbjct: 123 NEPEKQLTFLFSFSHEDGEKSSSSSLVPNFEMAVPCSLAGLSHSLASFHGILAV---EGK 179
Query: 114 ALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFA 173
+ NP T++ LP G I G DPI + +K L GF F
Sbjct: 180 VMCNPNTEQFTTLPV--------------GTIF-VGYDPIDDQYKAL---GF----DFDK 217
Query: 174 QVMLHTFGTNVWRELEIGQDYSLPHGTLSQ-DYVVTSSSCYTFLNGVHYWLA---SHNFD 229
+ + G VW L G+ G L+ ++ + C +NGV Y+ A S D
Sbjct: 218 RCHGNAIGHKVW-TLGGGEGMRQIRGDLAPYRPILLPNVC---INGVIYYGAHTLSQTKD 273
Query: 230 NRILSFHMSNDEFQEIQVPYYSLYATHETLVI 261
I+ F + +++ I P L + ++++I
Sbjct: 274 PVIVCFDVRSEKLSFITAPAVVLQSGMKSILI 305
>AT2G04920.1 | Symbols: | F-box family protein (FBX9) |
chr2:1726138-1727268 FORWARD
Length = 376
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 29/251 (11%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHF-KKKNSCHLLV--HYYVS 65
LP DL DIL+ +P SL R + K W + ++ F +HF K H+L+ Y V
Sbjct: 4 LPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYTVC 63
Query: 66 PYADDLVELFLDETLE-----DLSHQHFGLPIPFSKLHGPCNG-IFCVSDGSSYALWNPA 119
P + +L F ++E L H+ + C+G + C + +WNP
Sbjct: 64 PMSINLN--FSGSSIEFKSVLSLKDSHYNSEQVYIAKVFHCDGLLLCTTKDHRLLVWNPC 121
Query: 120 TKELQHLP-ATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVI-QGFLSEYHFFAQVML 177
E + + KP L G+ + ++K+L +L+ H + +
Sbjct: 122 LGETRWINFENDYKPYSRFSL-------GYKNNKSCRSYKILRFWTSYLTPNHIGLRYNI 174
Query: 178 HTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNRILSFHM 237
+ F T+ WR L +S +Y + S G YWLA N +L F
Sbjct: 175 YEFTTDSWRVL---------IDKVSLNYFLIESENGVSFKGNTYWLALDEETNFLLGFDF 225
Query: 238 SNDEFQEIQVP 248
+ + F+ + +P
Sbjct: 226 TMERFKRLCLP 236
>AT3G61340.1 | Symbols: | F-box family protein |
chr3:22701215-22702447 REVERSE
Length = 410
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 58/284 (20%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV-------- 60
+P DL I+IL LPVKS+ RF+ VSK W +T+R F + +S ++
Sbjct: 23 IPFDLVIEILLRLPVKSIARFRYVSKLWQSTLRGQHFTESYLTISSSRPKILFTCLKDCE 82
Query: 61 -HYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFC-----VSDGSSYA 114
++ SP+ DL + + H F + P S + P G C + G++
Sbjct: 83 TFFFSSPHPQDLSPIAAN------LHMSFPISCP-SNICRPVRGWLCGLHQRTTKGTTVT 135
Query: 115 ---LWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHF 171
+ NP+T E L K V G I G DPI NFKVL +
Sbjct: 136 EPLICNPSTGE----SVVLRK----VKTRRKGVISFLGFDPIDKNFKVLCMTRSCIGRAD 187
Query: 172 FAQVMLHTFGTNVWRELEIGQ----DYSLP----HGTLSQDYVVTSSSCYTFLNGVHYWL 223
+ +HT T ++ + Y +P +G D V +NGV Y+L
Sbjct: 188 SEEHQVHTLETGKKPSRKMIECDILHYPVPVEHTNGFSQYDGVC--------INGVLYYL 239
Query: 224 A-SHNF-DNR---ILSFHMSNDEFQEIQVPYYSLYATHETLVIY 262
A H D+R ++ F +D+F+ Y A H+ ++Y
Sbjct: 240 AIVHGVSDDRYPDVVCFEFGSDKFK-----YIKKVAGHDMEILY 278
>AT4G04690.1 | Symbols: | F-box family protein (FBX15) |
chr4:2373999-2375135 REVERSE
Length = 378
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 43/252 (17%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV-HYYVSPY 67
LP +L +IL P +SL RFK K W I S F+ H + + +
Sbjct: 11 LPFELVEEILKKTPAESLNRFKSTCKQWYGIITSKRFMYNHLDHSPERFIRIDDHKTVQI 70
Query: 68 ADDLVELFLDETLEDLSHQHFGLPIPF-SKLHGPCNGI-FCVSDGSSY--------ALWN 117
D + +F D + D+ F P F S +H C+G+ C+ SSY A+WN
Sbjct: 71 MDPMTGIFSDSPVPDV----FRSPHSFASMVH--CDGLMLCICSDSSYERTREANLAVWN 124
Query: 118 PATKELQHLPATLAKPSLPVPLTSGGDICGFGLD-PITNNFKVLVIQGFLSEYHFFAQVM 176
P TK+++ + P+ D G G D N+K++ G +S +
Sbjct: 125 PVTKKIKWIE--------PLDSYYETDYFGIGYDNTCRENYKIVRFSGPMSFDD--TECE 174
Query: 177 LHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTF-LNGVHYWLASHNFDNRILSF 235
++ F ++ WR TL Y + C + G YW+A + IL F
Sbjct: 175 IYEFKSDSWR-------------TLDTKYWDVYTQCRGVSVKGNMYWIADTK-EKFILRF 220
Query: 236 HMSNDEFQEIQV 247
S + F+ + V
Sbjct: 221 DFSMETFKNVCV 232
>AT5G50220.1 | Symbols: | F-box family protein |
chr5:20446068-20447200 REVERSE
Length = 357
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 43/190 (22%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSS-DFISQHFKKKNSCHLLVHYYVSPY 67
+P DL ++IL LP KSL++F+CVSK W + I SS DFI ++ P
Sbjct: 33 IPIDLMVEILKKLPAKSLIKFQCVSKQWSSIIGSSRDFIDS---------IVTRSLSQPS 83
Query: 68 ADDLVEL--FLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSY---ALWNPATKE 122
D L+ L +L+ +S P + ++ SY A++NP T++
Sbjct: 84 RDILISFSTTLTNSLKQISSSF------------PLRTLDILTKNQSYTEAAIYNPTTRQ 131
Query: 123 LQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSE-YHFFAQVMLHTFG 181
LP T A S G DP N +KV+ + + H F T G
Sbjct: 132 SLSLPETTAG-------HSHVSTSFLGYDPFKNQYKVICLDNYKRRCCHVF------TLG 178
Query: 182 TNV--WRELE 189
+ WR+++
Sbjct: 179 DAIRKWRKIQ 188
>AT1G13200.1 | Symbols: | F-box family protein |
chr1:4507221-4508528 REVERSE
Length = 435
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHF---KKKNSCHLLVHYY-- 63
LP D+ +I PVK+L+R K +SK W +TI S F +H KK H V
Sbjct: 43 LPNDVLEEIFLRFPVKALIRLKSLSKQWRSTIESRSFEERHLTIAKKAFVDHPKVMLVGE 102
Query: 64 --------VSPYADDLVELFLDETLEDLSHQHFGLPIPFSK---LHGPCNGIFCVSDGSS 112
+ P D LF E+ LS P F + C+G+FC+ S
Sbjct: 103 EDPIRGTGIRPDTDIGFRLFCLESASLLSFTRLNFPQGFFNWIYISESCDGLFCIHSPKS 162
Query: 113 YALW--NPATKELQHLP 127
++++ NPAT+ L+ LP
Sbjct: 163 HSVYVVNPATRWLRLLP 179
>AT1G53815.1 | Symbols: | F-box family protein |
chr1:20090249-20090962 REVERSE
Length = 237
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 8 ILPKDLAI-DILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHL-------- 58
++P DL I +IL+ LP+KS + +CVSK W + IR ++ +Q F K+
Sbjct: 34 LIPVDLFISNILSRLPLKSKAKCRCVSKLWSSIIRRPNY-NQLFPIKSPAPRILFTIEYA 92
Query: 59 -LVHYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGP-CNGIFCVSDGSSYALW 116
++ +Y SP + E + +L HQ+ G F ++ GP C + C S ++
Sbjct: 93 GILFFYSSPQPHNPDE---NSSLVATLHQNTG-NTKFYEICGPVCGRVLCRQYNSVGVIY 148
Query: 117 NPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLS-EYHFFAQV 175
NP T E +LP K FG DPI KVL I + H +
Sbjct: 149 NPITGESSNLPKLSLKGINKSEWLCDKARYSFGYDPIEKQLKVLCITWLRTGSEHLSNEY 208
Query: 176 MLHTFGTNVWREL 188
+ T GT + L
Sbjct: 209 QVLTLGTENKKTL 221
>AT1G47390.1 | Symbols: | F-box family protein |
chr1:17379544-17380656 FORWARD
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 32/241 (13%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
LP +L +IL+ +P +SL+RF+ VSK W A FI+ H K + ++ Y+
Sbjct: 7 LPCELIEEILSRVPPESLVRFRTVSKKWNALFDDKMFINNH---KMTFRFILATESKFYS 63
Query: 69 DDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNG-IFCVSDGSSYALWNPATKELQHLP 127
V + + +LS GL + K+ CNG + C + +WNP ++ + +
Sbjct: 64 ---VSMTPKIEVRELSLDIPGLELK-PKILIDCNGFLLCGMEKEGIVVWNPWLRQAKWIK 119
Query: 128 ATLAKPSLPVPLTSGGDICGFGLDPI---TNNFKVLVIQGFLSEYHFFAQV-MLHTFGTN 183
+ +PSL + G+ D + ++ +K LV + +E V +H F +N
Sbjct: 120 PKVNQPSLCF------NGIGYEYDNMKLESSGYKTLV--SYPNELDPTRSVWKIHDFASN 171
Query: 184 VWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNR---ILSFHMSND 240
W+ + +S VT LNG+ YW+ASH +N ++ ++ SN+
Sbjct: 172 SWKYTNL---------VMSCSSGVTLFGASVSLNGILYWVASHLKNNSLFVLVYYNFSNE 222
Query: 241 E 241
+
Sbjct: 223 K 223
>AT5G44220.1 | Symbols: | F-box family protein |
chr5:17810477-17811364 FORWARD
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 3 SNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHY 62
S + ++LP DL +IL LP K+L RF CVSK W + IRS D + + F ++S +
Sbjct: 56 STNSDLLPMDLIKEILKRLPAKTLARFLCVSKLWSSIIRSRDLM-KLFLTESSARPGRLF 114
Query: 63 YVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCN---GIFC---VSDGSSYALW 116
+ DD LF + E+ S + IP S C+ G+ C + S ++
Sbjct: 115 FTFRRKDDCF-LF---SSEESSVATYLFTIPASGYTNNCSFVHGLICYGTTAYASQLVVY 170
Query: 117 NPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVI 162
N +T+ LP A+ + L G DPI +KVL +
Sbjct: 171 NSSTRRSITLPEIEARSFVLKHL--------LGYDPIDGVYKVLCM 208
>AT1G62270.1 | Symbols: | F-box family protein |
chr1:23004499-23005650 FORWARD
Length = 383
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 91/238 (38%), Gaps = 33/238 (13%)
Query: 1 MASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHL-- 58
+ ++S + LP DL DIL +P SL R + K W F HF K L
Sbjct: 4 LKTSSFSSLPWDLVEDILARVPATSLKRLRSTCKQWNFLFNDQIFTKMHFDKAEKQFLVL 63
Query: 59 -LVHYYVSPYADDLVELF--LDETLE-----DLSHQHFGLPIPFSKLHGPCNGIFCVSDG 110
L Y V + DL L +D ++E L H F CNG+ +
Sbjct: 64 ILRLYTVCSMSLDLRGLHDNIDPSIEVKGELSLIDPHCSSRKTFVSKVFHCNGLLLCTTM 123
Query: 111 SSYALWNPATKELQHLPATLAKPSLPVPLTSGGDIC-GFGLDPITNNFKVLVIQGFLSEY 169
+ +WNP T + + + VP G+G N+K++ FL
Sbjct: 124 TGLVVWNPCTDQTRWIKT-------EVPHNRNDKYALGYGNYKSCYNYKIM---KFLDLE 173
Query: 170 HFFAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHN 227
F + ++ +N WR L GT++ D+ + + L G YW+ASH
Sbjct: 174 SF--DLEIYEVNSNSWRVL----------GTVTPDFTIPLDAEGVSLRGNSYWIASHK 219
>AT1G32600.1 | Symbols: | F-box family protein-related |
chr1:11794802-11795683 FORWARD
Length = 293
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 46/197 (23%)
Query: 64 VSPYADDLVELFLDETLEDLSHQHFGLPI---PFSKLHGPCNGIFCVS--DGSSYALWNP 118
+S + D L L L+ET + F LP P L C G+ C++ D + A+W P
Sbjct: 10 ISLHKDGLYLLDLNETTSLKLNVPFTLPAQTEPVCILS--CRGVICLTRKDNNELAIWKP 67
Query: 119 ATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQVMLH 178
+ + + +P + ++ GFG D + +++K++ I + +
Sbjct: 68 TSTKFKRVPM--------IKRGQTQNLLGFGYDRVLDDYKIVTI--------IDKKTYIF 111
Query: 179 TFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCY------TFLNGVHYWLASH-NFDNR 231
TF + WRE ++ + SS C+ T ++ YW+A+ N +
Sbjct: 112 TFKESSWRESKL----------------IPSSDCFFKERTGTVVDNCMYWIANRFNKEKF 155
Query: 232 ILSFHMSNDEFQEIQVP 248
IL F N+E+ ++ VP
Sbjct: 156 ILCFDFVNEEYSKLNVP 172
>AT3G04660.1 | Symbols: | F-box family protein |
chr3:1264794-1265966 FORWARD
Length = 390
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 104/264 (39%), Gaps = 40/264 (15%)
Query: 4 NSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYY 63
+ +ILP +L I+IL P KS+ + VS W + IR F + ++ + L+
Sbjct: 19 DPSSILPLELKIEILMKSPPKSIAKLGFVSNHWSSIIRGQVFTDLYMRRSLAHPRLLFSV 78
Query: 64 VSPYADDLVELFLDETLEDLSHQHFGLPIPFS-----KLHGPCNGIFCVSDGSSYALWNP 118
P ++ F + ED S H + + P G+ + + + NP
Sbjct: 79 YRPNMQ--MQFFHSCSQEDPSSDHRSVSYTLNSDLRYSFSPPIGGLIFGQNNTKAMIGNP 136
Query: 119 ATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQ-GFLSEYHFF----- 172
+T + LP + FG DP+ + +KVL + L H+F
Sbjct: 137 STGQFVPLPR--------IKTQRKHIFSIFGYDPVNDLYKVLCMTVRTLRGPHYFRWEDP 188
Query: 173 -------AQVMLHTFG-TNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLA 224
+ + T G WR LE Y H + SQ +GV Y+LA
Sbjct: 189 MWEEPMTEEHQVFTLGPKQKWRMLEC--KYLHRHHSGSQGIC---------RDGVMYYLA 237
Query: 225 SHNFDNRILSFHMSNDEFQEIQVP 248
S N ++SF +S++EF ++P
Sbjct: 238 SFNDKRSLMSFDLSSEEFNVTKLP 261
>AT2G31470.1 | Symbols: | F-box family protein |
chr2:13407492-13408655 REVERSE
Length = 387
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 117/289 (40%), Gaps = 57/289 (19%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSC-----------H 57
+P DL I+I + PVKS+ R +CVSK W + +R F + K SC H
Sbjct: 25 IPIDLVIEIFSRSPVKSIARCRCVSKLWASILRLPYFTELYLTK--SCARPRLLFACQKH 82
Query: 58 LLVHYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFS---KLHGPCNGIFCVSDGSSYA 114
+ ++ +P + +E+ L+ F + IPF + P G+ V
Sbjct: 83 RELFFFSTPQPHNP-----NESSSPLA-ASFHMKIPFDGRFNIISPIGGLVFVR--YEQI 134
Query: 115 LWNPATKELQHL---PATLAKPSLPVPLTSGGDICG---FGLDPITNNFKVLVIQ---GF 165
L T E P+T +LP P T I G FG DPI FKVL + G
Sbjct: 135 LKGRKTPEFVSAICNPSTGQSLTLPKPKTRK-RIWGTSHFGYDPIEKQFKVLSMNIGDGV 193
Query: 166 LSEYHFFAQVMLHTFGTN--VWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWL 223
E++ T GT WR +E S+PH S+ + NGV Y+
Sbjct: 194 YKEHYVL------TLGTENLSWRRIEC----SIPHVHGSKGICI---------NGVLYYR 234
Query: 224 ASHNFDNRILSFHMSNDEFQEIQVPYYSLYATHETLVIYH*LIALLLYE 272
A + + L + F++ Y + TL+ Y+ +A L++E
Sbjct: 235 AKADMFSGTLMIVCFDVRFEKFS--YIKILKPTTTLISYNGKLASLVWE 281
>AT3G17480.1 | Symbols: | F-box family protein |
chr3:5983199-5984320 FORWARD
Length = 373
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 27/214 (12%)
Query: 1 MASNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHF---KKKNSCH 57
+ S+ ++L +DL DIL+ +P SL+R + K W A + FI +HF +K+
Sbjct: 3 LQSSPMSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDM 62
Query: 58 LLVHYYVSPYADDL----------VELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCV 107
LL VS + +L +EL + L+ L G F H CNG+
Sbjct: 63 LLRSLRVSSMSVNLHGLHDNIDPSIELKRELNLKGLLCNS-GKVESFEVFH--CNGLLLF 119
Query: 108 SDGSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLS 167
++ S+ +WNP T + + + A G+ + ++K+L FL
Sbjct: 120 TNTSTIVVWNPCTGQTKWIQTESANTRYHKY------ALGYENKNLCRDYKIL---RFLD 170
Query: 168 EYHFFAQVMLHTFGTNVWRELE-IGQDYSLPHGT 200
+ F ++ ++ F ++ WR L+ + D+ L G+
Sbjct: 171 DGTNF-ELEIYEFNSSSWRVLDSVEIDFELDIGS 203
>AT2G16810.1 | Symbols: | F-box family protein (FBX8) |
chr2:7287944-7288831 REVERSE
Length = 295
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 105/270 (38%), Gaps = 64/270 (23%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQ------------------HF 50
+P+DL I+ILT LP KS+MRFKCVSK W + + S F ++ +
Sbjct: 41 IPQDLLIEILTRLPPKSVMRFKCVSKFWSSLLSSRYFCNRFLIVPSQPQPSLYMCLLDRY 100
Query: 51 KKKNSCHLLVHYYVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDG 110
S L SPY+ D+ L F L I G +
Sbjct: 101 NYSKSLILSSAPSTSPYS-----FVFDQDLTIRKMGGFFLRI--------LRGFIFFTRN 147
Query: 111 SSYALWNPATKELQHLPA-----TLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGF 165
++NP T++L LP +A P P IC DP+ + +K+L +
Sbjct: 148 LKARIYNPTTRQLVILPTIKESDIIAGP----PYNILYFICH---DPVNDRYKLLCTVSY 200
Query: 166 LSEYHFFAQVMLHTFGTNVWR-ELEIGQDYS-----LPHGTLSQDYVVTSSSCYTFLNGV 219
S+ L + +W LE G + PH S +NGV
Sbjct: 201 ASDND------LQNLKSELWIFVLEAGGSWKRVANEFPHH--------VPSHLDLNMNGV 246
Query: 220 HYWLA-SHNFDNRILSFHMSNDEFQEIQVP 248
Y+LA + ++SF + ++EF +QVP
Sbjct: 247 LYFLAWTDPHTCMLVSFDVRSEEFNTMQVP 276
>AT2G43270.1 | Symbols: | F-box family protein |
chr2:17988207-17989491 REVERSE
Length = 387
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 12 DLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYADDL 71
DL +I LP+KS++RFK VSK W + + S F + + +L D
Sbjct: 7 DLLEEIFLGLPLKSILRFKTVSKQWRSILESKSFAERRLNVEKKEKILA-------VGDR 59
Query: 72 VELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNPATKELQHLPATLA 131
EL E E++ + I ++ C G+ C+ + NP+T++L+ P +
Sbjct: 60 TELGF-EGEEEIQMVYLHCDIDATRPSLTCEGLVCIPAPGWINVLNPSTRQLRRFPCS-- 116
Query: 132 KPSLPVP-------------LTS--GGDICGFGLDPITNNFKVL 160
P+ VP LTS G GFG D ++KV+
Sbjct: 117 -PNHHVPSDRIRFQFRDELYLTSFPGNWEMGFGRDKFNGSYKVV 159
>AT3G47030.1 | Symbols: | F-box family protein |
chr3:17322171-17323415 FORWARD
Length = 414
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 60/247 (24%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
+P DL ID+ + L ++ + R +C+S+ W + +R F ++ F K +S + + Y
Sbjct: 34 IPDDLLIDVFSRLSIEDVARCRCLSRFWSSILRRRYF-TELFHKMSSTRPRILFTFLYYG 92
Query: 69 DDLVELFLDETLEDLSHQHFGLPIPF-----------------------SKLHGPCNGIF 105
L +DL + P+P+ +K+ P G+
Sbjct: 93 KRL----FYSMPQDLDPSNHYSPLPYFSISYSPISAHYQMHFPKVLGASAKVCPPILGLI 148
Query: 106 CVSDGSSYALWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGF 165
C S ++NP+T+E + + T G FG DPI FKVL +
Sbjct: 149 CCK-SSKTMIFNPSTRESKFISTT---------KRVGVKSTSFGYDPIDKLFKVLSMSD- 197
Query: 166 LSEYHFFAQVMLHTFGTNV--WRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWL 223
F +V T GT V WR +E S+PH L + ++GV Y+L
Sbjct: 198 ----DFVCRV--STLGTEVVTWRTVEC----SVPHHPLHSEIC---------MDGVLYYL 238
Query: 224 ASHNFDN 230
A D
Sbjct: 239 ARRVGDE 245
>AT1G11270.3 | Symbols: | F-box family protein |
chr1:3785833-3786653 REVERSE
Length = 223
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 8 ILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPY 67
+LP D+ IL LPV+SL+RFKCVS W +TI SQ F+++ L+ S
Sbjct: 34 LLPHDVVGLILERLPVESLLRFKCVSNQWKSTIE-----SQCFQERQ----LIRRMESRG 84
Query: 68 ADDLVELFLDETLEDLSHQHFGLPI----PFSKLH-----GPCNGIFCV-SDGSSYALWN 117
D LV F D+ + FG I F LH G C G+ C+ S + N
Sbjct: 85 PDVLVVSFADDEDKYGRKAVFGSSIVSTFRFPTLHTLICYGSCEGLICIYCVYSPNIVVN 144
Query: 118 PATKELQHLP 127
PATK + P
Sbjct: 145 PATKWHRSCP 154
>AT1G47765.1 | Symbols: | F-box family protein |
chr1:17574906-17576092 REVERSE
Length = 385
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 3 SNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHY 62
S S + LP DL +IL LP KS+ RF+CVSK W + FI+ + LLV +
Sbjct: 20 SKSASSLPLDLTSEILLRLPEKSIARFRCVSKLWLSITTDPYFINLFETRSPRPSLLVCF 79
Query: 63 ------YVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALW 116
+VS L L + S + I ++ + G+ C +W
Sbjct: 80 IENDKLFVSSIPQHLHS--LQNSKRSYSSSQLFIVIIWN--YQKDVGLICFKTSKMPIVW 135
Query: 117 NPATKELQHLPATLAKPSLPVPLTSGGDICGF-GLDPITNNFKVLVI 162
NP+ ++L +LP+P S +I F G DP+ KV+ +
Sbjct: 136 NPSKRQL---------ITLPIPRLSWNNIIVFLGYDPVEGKHKVMCL 173
>AT2G43440.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G43445.1); Has 740
Blast hits to 736 proteins in 32 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 738;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr2:18039326-18040599 FORWARD
Length = 401
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 40/229 (17%)
Query: 3 SNSQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFIS-----QHFKKKNSCH 57
+NS I+P +L DI LP+KS+++FK VS+ W + + S F+ Q +K
Sbjct: 8 TNSIYIVP-ELLEDIFLRLPLKSILKFKTVSRQWRSILESKLFVERRGNLQKHHRKILAA 66
Query: 58 LLVHYYVSPYADDLVELFLD---ETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYA 114
+Y++ P +F + E E++ + H P C+G+ C+++ +
Sbjct: 67 YNCNYFMRP------SIFPESRFEGDEEIVYLHCDAAQPSMT----CDGLLCITEPGWFN 116
Query: 115 LWNPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQ 174
+ NP+ +L+ P + GFG D +T +K++ + +H +
Sbjct: 117 VLNPSAGQLRRFPPGPGPVK----GPQENWLLGFGRDNVTGRYKIVRMC-----FHDCYE 167
Query: 175 VMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWL 223
+ T VW +L S PH L + S C +NG YWL
Sbjct: 168 FGILDIETGVWSKLR-----SPPHNMLPG----SKSVC---VNGSIYWL 204
>AT1G12170.1 | Symbols: | F-box family protein |
chr1:4128607-4129701 REVERSE
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 8 ILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLL----VHYY 63
ILP +L +IL +P SL RFK V K W +S F++ H + LL Y
Sbjct: 5 ILPWELVEEILYRVPPLSLTRFKIVCKQWNTLFKSKSFVNNHLVRVRPQFLLWTDSKMYS 64
Query: 64 VSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNG-IFCVSDGSSY----ALWNP 118
VS +D ++ + E D+ + + + F+ PC+G +FC D S+ A+WNP
Sbjct: 65 VSVNLNDDQKIDMRELPLDIPYLNNFMRTYFT----PCDGLLFC--DSWSWRKKAAIWNP 118
Query: 119 ATKELQHLPATLAKPSL--PVPLTSGGDICGFGL--DPITNNFKVLVIQGFLSEYHFFAQ 174
++ + + + K + SG G + I N K++ E +
Sbjct: 119 WLRQTKWIEYSKEKTFTFRGIGYDSGRPDKGHKIIGSSIYNKRKLI-------EDPLYRS 171
Query: 175 VMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASH 226
V ++TF TN W+ + T S++ + S + LNG YW+ S+
Sbjct: 172 VEIYTFETNGWKSM----------NTFSEEGEIRPLSDVS-LNGNLYWVVSN 212
>AT1G32430.1 | Symbols: | F-box family protein |
chr1:11704932-11706325 REVERSE
Length = 380
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 5 SQNILPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYV 64
++ LP DL +IL+ +P SL RFK V K W A FI+ H K + ++
Sbjct: 3 NKEKLPWDLEEEILSRVPPTSLDRFKTVCKRWNALFNDKTFINNH---KMTFQFVLSTRS 59
Query: 65 SPYADDLVELFLDETLEDLSHQHFGLPIPFSKLHGPCNGIFCVSDGSSYALWNPATKELQ 124
Y+ V + + +L+ + GL K +G+ G+ +WNP K+ +
Sbjct: 60 KIYS---VSVNPKVEVRELTLNNPGLKAQRHKNLFATSGLLLCDVGNGAVVWNPWLKQSR 116
Query: 125 HLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKV---------LVIQGFLSEYHFFAQV 175
+ + +PSL D G G D NN +V + ++ S+Y +
Sbjct: 117 CIKLEVNEPSL--------DFLGIGYD---NNKRVEEIVYKTLSVYMKDLGSQYTW---- 161
Query: 176 MLHTFGTNVWRELEIGQ 192
+H F ++ W + EI +
Sbjct: 162 KIHDFASDTWIDQEIEK 178
>AT1G71320.1 | Symbols: | S locus F-box-related / SLF-related |
chr1:26882485-26883818 FORWARD
Length = 392
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 55/284 (19%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKK-------NSCHLLVH 61
+P D+A I LP+KSL RFK +SK W + I S+ F + + H+ H
Sbjct: 14 IPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIESTYFSHKRLIRTGLPTPNMKFLHISQH 73
Query: 62 Y---YVSPYADDLVELFLDETLEDLSHQHFGLPIPFSKLH--GPCNGIFCVS---DGSSY 113
+ +V Y++ + L + +D +++ + G C+G+ + D S
Sbjct: 74 FTANFVEEYSNSITFLLETFSRDDQNNRKTFDESQNKTIQVLGSCDGLVLLRIHDDFRSI 133
Query: 114 ALWNPATKELQHL---------------PATLAKP---------SLPVPLTSGGDICGFG 149
L NP TKE L PA KP + + + GFG
Sbjct: 134 YLINPTTKEHMKLSPEFMQWPFTLSYLTPAMANKPWRQLSQSVLDYDISVKRMPSLAGFG 193
Query: 150 LDPITNNFKVLVI--QGFLSEYHFFAQVMLHTFGTNVWRELEIGQDYSLPHGTLSQDYVV 207
D + ++KV++I + + ++ F A+V+ G + ++G Y + H +
Sbjct: 194 KDIVKKSYKVVLIYTRYEIHDHEFKAKVLSLDNG----EQRDVGF-YDIHHCIFCDE--- 245
Query: 208 TSSSCYTFLNGVHYWLASHNFDN---RILSFHMSNDEFQEIQVP 248
+S Y NG +WL ++L+ + +EF+ I +P
Sbjct: 246 -QTSVYA--NGSLFWLTLKKLSQTSYQLLAIDLHTEEFRWILLP 286
>AT1G54640.1 | Symbols: | F-box family protein-related |
chr1:20403892-20404807 REVERSE
Length = 245
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 62 YYVSPYADDLVELFLDETLEDLSHQHFGLPI---PFSKLHGPCNGIFCVS--DGSSYALW 116
+ +S + D L L L+ET F LP P LH C G+ C++ + + A+W
Sbjct: 8 HLISLHKDGLYRLNLNETTLLKLDLPFTLPAETEPVCILH--CRGMMCLTLKENNDLAIW 65
Query: 117 NPATKELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQVM 176
P ++E + +P + + ++ GFG D I+N++K++ GF +
Sbjct: 66 KPGSEEFKRIPMVIPGQTT--------NLLGFGYDRISNDYKIVTKIGF--------KTY 109
Query: 177 LHTFGTNVWRELEIGQDYSLPHGTLSQDYVVTSSS 211
++ F + WRE S+P +L + ++ + +
Sbjct: 110 IYAFKESCWRE-------SVPDTSLHRKFIDRTGT 137
>AT2G02030.1 | Symbols: | F-box family protein | chr2:482335-483829
FORWARD
Length = 334
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 106/273 (38%), Gaps = 40/273 (14%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQH--FKKKNSCHLLVHYYVSP 66
+P ++ +IL LPVKSL RF+ VSK W I S F +H +K C LL
Sbjct: 39 IPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHMALEKSKGCKLLF------ 92
Query: 67 YADDLVE-----LFLDE-TLEDLS-----HQHFGLP--IPFSKLHGPCNGIFCVSDGS-S 112
DD V+ LFL LE S Q F F + C+G+ C D + +
Sbjct: 93 VCDDFVDRAEDTLFLKTVALEKTSVSEGDEQAFEFEGYKGFLDISESCDGLVCFYDTTRA 152
Query: 113 YALWNPATKELQHLPAT------LAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFL 166
+ NPAT LP + + KP+ V L D LDP+ ++ V G
Sbjct: 153 VEVMNPATTMFIELPLSRIQQLCIYKPNPEVELEPVQDPNPV-LDPVMTCSQIGV--GKD 209
Query: 167 SEYHFFAQVMLHTFGTNVWRELEI----GQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYW 222
S + V ++ E+ G+ + + T + + F NG YW
Sbjct: 210 SVSGSYKLVWMYNTSPATPPTCEVLDLDGKKWRFVNTTSLDHHQILCDQRPVFANGSLYW 269
Query: 223 LASHN-----FDNRILSFHMSNDEFQEIQVPYY 250
L +++ + + FQ IQ P +
Sbjct: 270 LTGDEEGYATTQTKLIVLDLHTEMFQVIQTPPF 302
>AT3G59610.1 | Symbols: | F-box family protein / jacalin lectin
family protein | chr3:22019553-22021199 FORWARD
Length = 521
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 41/245 (16%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLVHYYVSPYA 68
LP DL +IL+ LP++ L RF+CV K W + F + +L+ A
Sbjct: 8 LPYDLEGEILSHLPIQILARFRCVCKRWNTLFKERRFFNSDLGLARPQFILL-------A 60
Query: 69 DDLVELFLDETLEDLSHQHFGLP--IPFSKLHGP-----CNGIFCVSDGSSYALWNPATK 121
+ + +D L+ S + LP IP KL+ P C+G+F + + NP +
Sbjct: 61 ESKI-CSVDVNLDGPSIEVHNLPSDIPGYKLYMPMHVEYCDGLFLYATCYGIGICNPWLR 119
Query: 122 ELQHLPATLAKPSLPVPLTSGGDICGFGLDPITNNFKVLVIQGFLSEYHFFAQVMLHTFG 181
+++ ++ G D G G D + ++ + + A V G
Sbjct: 120 QIRWFKSSY----------EGYDFSGMGYDNSRQDKHYKILGSYCTNTTMNASVT--ELG 167
Query: 182 TNVWRELEIGQDYSLPHGTLSQDYVVTSSSCYTFLNGVHYWLASHNFDNR---ILSFHMS 238
++ W+ E + ++ S LNG YW+A +N ++R I SF S
Sbjct: 168 SDAWKSYEFA----------FHSWNLSMSPYSVSLNGNLYWVA-YNHESRDYFIQSFDFS 216
Query: 239 NDEFQ 243
F+
Sbjct: 217 TVSFK 221
>AT1G67130.1 | Symbols: | F-box family protein |
chr1:25099262-25100625 REVERSE
Length = 391
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 9 LPKDLAIDILTLLPVKSLMRFKCVSKSWCATIRSSDFISQHFKKKNSCHLLV-------- 60
+P DL +DIL+ LP KS+ RF CVSK W + + S DF + +S L+
Sbjct: 10 IPTDLILDILSRLPTKSIARFHCVSKLWSSMLASQDFTRLFVNRSSSNPRLLLGIVRGGE 69
Query: 61 -HYYVS-----PYADDLVELFLD---ETLEDLSHQHFGLPIPF 94
+Y S PY +E+ D + E HQH G F
Sbjct: 70 WSFYSSPQPKNPYEKSSLEVAADFHMKLSEIKQHQHHGTSYAF 112