Jatropha Genome Database
- JcCB0062371.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0062371.10 + phase: 0
(250 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20510.1 | Symbols: AL5 | AL5 (ALFIN-LIKE 5); DNA binding / m... 321 2e-88
AT3G42790.1 | Symbols: AL3 | AL3 (ALFIN-LIKE 3); DNA binding / m... 316 8e-87
AT5G26210.1 | Symbols: AL4 | AL4 (ALFIN-LIKE 4); DNA binding / m... 303 5e-83
AT2G02470.1 | Symbols: AL6 | AL6 (ALFIN-LIKE 6); DNA binding / m... 298 2e-81
AT1G14510.1 | Symbols: AL7 | AL7 (ALFIN-LIKE 7); DNA binding / m... 293 9e-80
AT5G05610.2 | Symbols: AL1 | AL1 (ALFIN-LIKE 1); DNA binding / m... 259 1e-69
AT5G05610.1 | Symbols: AL1 | AL1 (ALFIN-LIKE 1); DNA binding / m... 259 1e-69
AT3G11200.1 | Symbols: AL2 | AL2 (ALFIN-LIKE 2); DNA binding / m... 243 6e-65
AT3G11200.2 | Symbols: AL2 | AL2 (ALFIN-LIKE 2); DNA binding / m... 202 2e-52
>AT5G20510.1 | Symbols: AL5 | AL5 (ALFIN-LIKE 5); DNA binding /
methylated histone residue binding |
chr5:6939991-6942846 REVERSE
Length = 260
Score = 321 bits (823), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 182/260 (70%), Gaps = 10/260 (3%)
Query: 1 MDGG-AQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWX 59
M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFPNE W
Sbjct: 1 MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60
Query: 60 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119
GINFARDGMQE++WLSLVAVHSDAWLL+V+FYFG+RFGFD+AD
Sbjct: 61 VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120
Query: 120 RKRLFTMINDLPTIFEVVTGSVKKQAKDXXXXXXXXXXXXXXXXXXXXXXXXFSKG---- 175
RKRLF+MIN++PT++EVVTG+ +KQ K+ SK
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAK 180
Query: 176 -----QPKXXXXXXXXXXXXXXXXTLCGACGENYAADEFWICCDICEKWFHGKCVKITPA 230
TLCGACG+NYA+DEFWICCD+CEKWFHG+CVKITPA
Sbjct: 181 DEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPA 240
Query: 231 RAEHIKQYKCPSCSNKRARP 250
RAEHIK YKCP+CSNKRARP
Sbjct: 241 RAEHIKHYKCPTCSNKRARP 260
>AT3G42790.1 | Symbols: AL3 | AL3 (ALFIN-LIKE 3); DNA binding /
methylated histone residue binding |
chr3:14878128-14879618 REVERSE
Length = 250
Score = 316 bits (810), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 157/251 (62%), Positives = 174/251 (69%), Gaps = 4/251 (1%)
Query: 1 MDGGAQ-YNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWX 59
M+GGA YNPRTVEEVF+DFKGRR ++KALTTDV+EFYQQCDPEKENLCLYG PNE+W
Sbjct: 1 MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60
Query: 60 XXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKAD 119
GINFARDG+ EK+WLSLVA+HSDAWLL+V+FYFG+RF F K +
Sbjct: 61 VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120
Query: 120 RKRLFTMINDLPTIFEVVTGSVKKQAKDXXXXXXXXXXXXXXXXXXXXXXXXFSKG-QPK 178
RKRLF MIND+PTIFEVVTG K AKD SK QPK
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPK 178
Query: 179 XXXXXXXXXXXXXXXXTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQY 238
TLCGACG++ ADEFWICCD+CEKWFHGKCVKITPARAEHIKQY
Sbjct: 179 EEDEEIDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQY 238
Query: 239 KCPSCSNKRAR 249
KCPSCSNKRAR
Sbjct: 239 KCPSCSNKRAR 249
>AT5G26210.1 | Symbols: AL4 | AL4 (ALFIN-LIKE 4); DNA binding /
methylated histone residue binding |
chr5:9158566-9160221 REVERSE
Length = 255
Score = 303 bits (777), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 167/254 (65%), Positives = 177/254 (69%), Gaps = 5/254 (1%)
Query: 1 MDGGAQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWXX 60
M+ G YNPRTVEEVFRDFKGRRAGMIKALTTDV+EF++ CDPEKENLCLYG PNE W
Sbjct: 1 MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60
Query: 61 XXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120
GINFARDGM EKDWLSLVAVHSDAWLLAVAF+FGARFGFDKADR
Sbjct: 61 NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120
Query: 121 KRLFTMINDLPTIFEVVTGSVKKQAKD-XXXXXXXXXXXXXXXXXXXXXXXXFSKGQPK- 178
KRLF M+NDLPTIFEVV G+ KKQ KD FSK +PK
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180
Query: 179 ---XXXXXXXXXXXXXXXXTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHI 235
T CGACGE+YAADEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240
Query: 236 KQYKCPSCSNKRAR 249
KQYKCPSCSNKRAR
Sbjct: 241 KQYKCPSCSNKRAR 254
>AT2G02470.1 | Symbols: AL6 | AL6 (ALFIN-LIKE 6); DNA binding /
methylated histone residue binding | chr2:652837-654621
FORWARD
Length = 256
Score = 298 bits (763), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/257 (58%), Positives = 167/257 (64%), Gaps = 8/257 (3%)
Query: 1 MDGGAQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWXX 60
M+G PRTVEEVF DF+GRRAG+IKALT D+ +FYQ CDPEKENLCLYG PNE W
Sbjct: 1 MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60
Query: 61 XXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120
GINFARDGMQEKDW+SLVAVHSD+WLL+VAFYFGARFGF K +R
Sbjct: 61 NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120
Query: 121 KRLFTMINDLPTIFEVVTGSVKKQAKDXXXXXXXXXXX----XXXXXXXXXXXXXFSKGQ 176
KRLF MIN+LPTIFEVV+G+ KQ+KD S
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPP 179
Query: 177 PK---XXXXXXXXXXXXXXXXTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAE 233
PK +CGACG+NY DEFWICCD CEKWFHGKCVKITPA+AE
Sbjct: 180 PKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAE 239
Query: 234 HIKQYKCPSCSNKRARP 250
HIK YKCP+CSNKRARP
Sbjct: 240 HIKHYKCPTCSNKRARP 256
>AT1G14510.1 | Symbols: AL7 | AL7 (ALFIN-LIKE 7); DNA binding /
methylated histone residue binding |
chr1:4962171-4964154 REVERSE
Length = 252
Score = 293 bits (749), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 143/248 (57%), Positives = 161/248 (64%), Gaps = 1/248 (0%)
Query: 1 MDGGAQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWXX 60
M+G PRTVEEVF DF+GRRAG+IKAL+TDV++FY QCDPEKENLCLYG PNE W
Sbjct: 1 MEGIQHPIPRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEV 60
Query: 61 XXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120
GINFARDGMQEKDW+SLVAVHSD+WL++VAFYFGARFGF K +R
Sbjct: 61 NLPVEEVPPELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNER 120
Query: 121 KRLFTMINDLPTIFEVVTGSVKKQAKDXXXXXXXXXXXXXXXXXXXXXXXXFSK-GQPKX 179
KRLF MINDLPTIFEVVTG+ K+ SK P
Sbjct: 121 KRLFQMINDLPTIFEVVTGNAKQSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPR 180
Query: 180 XXXXXXXXXXXXXXXTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYK 239
+CGACG+NY DEFWICCD CEKWFHGKCVKITPA+AEHIK YK
Sbjct: 181 KEDESGDEDEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYK 240
Query: 240 CPSCSNKR 247
CPSC+ +
Sbjct: 241 CPSCTTSK 248
>AT5G05610.2 | Symbols: AL1 | AL1 (ALFIN-LIKE 1); DNA binding /
methylated histone residue binding |
chr5:1677331-1678942 REVERSE
Length = 241
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/242 (53%), Positives = 154/242 (63%), Gaps = 8/242 (3%)
Query: 8 NPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWXXXXXXXXX 67
NPRTVEE+F+DF GRR+G ++AL+ DV++FY CDPE ENLCLYG PN W
Sbjct: 7 NPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVNLPAEEV 66
Query: 68 XXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFTMI 127
GINFARDGMQ KDWLSLVAVHSD WLL+V+ YFGAR ++ +RKRLF++I
Sbjct: 67 PPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERKRLFSLI 124
Query: 128 NDLPTIFEVVTGSVKKQAKDXXXXXXXXXXXXXXXXXXXXXXXXFSKGQPKXXXXXXXXX 187
NDLPT+FEVVTG +K KD +K PK
Sbjct: 125 NDLPTLFEVVTG--RKPIKDGKPSMDLGSKSRNGVKRSIEGQ---TKSTPK-LMEESYED 178
Query: 188 XXXXXXXTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 247
TLCG+CG NY DEFWICCD+CE+W+HGKCVKITPA+AE IKQYKCPSC K+
Sbjct: 179 EDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSCCTKK 238
Query: 248 AR 249
R
Sbjct: 239 GR 240
>AT5G05610.1 | Symbols: AL1 | AL1 (ALFIN-LIKE 1); DNA binding /
methylated histone residue binding |
chr5:1677331-1678942 REVERSE
Length = 241
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/242 (53%), Positives = 154/242 (63%), Gaps = 8/242 (3%)
Query: 8 NPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWXXXXXXXXX 67
NPRTVEE+F+DF GRR+G ++AL+ DV++FY CDPE ENLCLYG PN W
Sbjct: 7 NPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEVNLPAEEV 66
Query: 68 XXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFTMI 127
GINFARDGMQ KDWLSLVAVHSD WLL+V+ YFGAR ++ +RKRLF++I
Sbjct: 67 PPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGAR--LNRNERKRLFSLI 124
Query: 128 NDLPTIFEVVTGSVKKQAKDXXXXXXXXXXXXXXXXXXXXXXXXFSKGQPKXXXXXXXXX 187
NDLPT+FEVVTG +K KD +K PK
Sbjct: 125 NDLPTLFEVVTG--RKPIKDGKPSMDLGSKSRNGVKRSIEGQ---TKSTPK-LMEESYED 178
Query: 188 XXXXXXXTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 247
TLCG+CG NY DEFWICCD+CE+W+HGKCVKITPA+AE IKQYKCPSC K+
Sbjct: 179 EDDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSCCTKK 238
Query: 248 AR 249
R
Sbjct: 239 GR 240
>AT3G11200.1 | Symbols: AL2 | AL2 (ALFIN-LIKE 2); DNA binding /
methylated histone residue binding |
chr3:3508387-3510418 REVERSE
Length = 246
Score = 243 bits (621), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 129/243 (53%), Positives = 155/243 (63%), Gaps = 7/243 (2%)
Query: 8 NPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWXXXXXXXXX 67
NPRTVEE+F+D+ RRA +++ALT DV++FY QCDPEKENLCLYG PNE W
Sbjct: 9 NPRTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVNLPAEEV 68
Query: 68 XXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFTMI 127
GINFARDGMQ KDWLSLVAVHSD WLL+V+FYFGAR ++ +RKRLF++I
Sbjct: 69 PPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGAR--LNRNERKRLFSLI 126
Query: 128 NDLPTIFEVVTGSVKKQAKDXXXXXXXXXXXXXXXXXXXXXXXXFSKGQPKXXXXXXXXX 187
NDLPT+F+VVTG +K KD S PK
Sbjct: 127 NDLPTLFDVVTG--RKAMKDNKPSSDSGSKSRNGTKRSIDGQTKSS--TPKLMEESYEEE 182
Query: 188 XXXXXX-XTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNK 246
TLCG+CG +Y +EFWICCD+CE+W+HGKCVKITPA+AE IKQYKCP C K
Sbjct: 183 EEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPPCCAK 242
Query: 247 RAR 249
+ R
Sbjct: 243 KGR 245
>AT3G11200.2 | Symbols: AL2 | AL2 (ALFIN-LIKE 2); DNA binding /
methylated histone residue binding |
chr3:3508387-3510195 REVERSE
Length = 233
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 124/207 (59%), Gaps = 7/207 (3%)
Query: 44 EKENLCLYGFPNEQWXXXXXXXXXXXXXXXXXXGINFARDGMQEKDWLSLVAVHSDAWLL 103
EKENLCLYG PNE W GINFARDGMQ KDWLSLVAVHSD WLL
Sbjct: 32 EKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLL 91
Query: 104 AVAFYFGARFGFDKADRKRLFTMINDLPTIFEVVTGSVKKQAKDXXXXXXXXXXXXXXXX 163
+V+FYFGAR ++ +RKRLF++INDLPT+F+VVTG +K KD
Sbjct: 92 SVSFYFGAR--LNRNERKRLFSLINDLPTLFDVVTG--RKAMKDNKPSSDSGSKSRNGTK 147
Query: 164 XXXXXXXXFSKGQPKXXXXXXXXXXXXXXXX-TLCGACGENYAADEFWICCDICEKWFHG 222
S PK TLCG+CG +Y +EFWICCD+CE+W+HG
Sbjct: 148 RSIDGQTKSS--TPKLMEESYEEEEEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHG 205
Query: 223 KCVKITPARAEHIKQYKCPSCSNKRAR 249
KCVKITPA+AE IKQYKCP C K+ R
Sbjct: 206 KCVKITPAKAESIKQYKCPPCCAKKGR 232