Jatropha Genome Database

JcCB0061781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0061781.10 + phase: 0 /partial
         (178 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G48030.1 | Symbols:  | endonuclease/exonuclease/phosphatase f...   252   1e-67
AT3G21530.1 | Symbols:  | endonuclease/exonuclease/phosphatase f...   228   1e-60

>AT2G48030.1 | Symbols:  | endonuclease/exonuclease/phosphatase
           family protein | chr2:19647834-19649988 REVERSE
          Length = 438

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 117/151 (77%), Positives = 133/151 (88%), Gaps = 3/151 (1%)

Query: 1   ENWRMKQINAIIQSNDGPHILAGGLNSLDETDYSAERWTDIVKYYEEMGKPTPKVEVMRF 60
           E WRMKQ++AIIQS + PHILAG LNSLDE+DYS ERWTDIVKYYEEMGKP PK +VMRF
Sbjct: 258 EKWRMKQVDAIIQSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKPIPKAQVMRF 317

Query: 61  LKSKHYSDAKEFAGECESVVMIAKGQNVQGTCKYGTRVDYILASSNSPYKFVPGSYSVFS 120
           LKSK Y+DAK+FAGECESVV++AKGQ+VQGTCKYGTRVDYILASS+SPY+FVPGSYSV S
Sbjct: 318 LKSKEYTDAKDFAGECESVVVVAKGQSVQGTCKYGTRVDYILASSDSPYRFVPGSYSVLS 377

Query: 121 SKGTSDHHIVKVDMIK---MNGGDQENVLTR 148
           SKGTSDHHIVKVD++K   +N  +QE    R
Sbjct: 378 SKGTSDHHIVKVDVVKATSINVNEQEQRPIR 408


>AT3G21530.1 | Symbols:  | endonuclease/exonuclease/phosphatase
           family protein | chr3:7582828-7584448 REVERSE
          Length = 458

 Score =  228 bits (582), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 106/135 (78%), Positives = 118/135 (87%)

Query: 1   ENWRMKQINAIIQSNDGPHILAGGLNSLDETDYSAERWTDIVKYYEEMGKPTPKVEVMRF 60
           ENWRMKQI+AI + ++ PHIL GGLNSLD +DYS  RW  IVKYYE+ GKPTP+VEVMRF
Sbjct: 282 ENWRMKQIDAITRGDESPHILLGGLNSLDGSDYSIARWNHIVKYYEDSGKPTPRVEVMRF 341

Query: 61  LKSKHYSDAKEFAGECESVVMIAKGQNVQGTCKYGTRVDYILASSNSPYKFVPGSYSVFS 120
           LK K Y D+KEFAGECE VV+IAKGQNVQGTCKYGTRVDYILAS  SPY+FVPGSYSV S
Sbjct: 342 LKGKGYLDSKEFAGECEPVVIIAKGQNVQGTCKYGTRVDYILASPESPYEFVPGSYSVVS 401

Query: 121 SKGTSDHHIVKVDMI 135
           SKGTSDHHIVKVD++
Sbjct: 402 SKGTSDHHIVKVDLV 416