Jatropha Genome Database

JcCB0060001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0060001.10 + phase: 0 
         (407 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32060.1 | Symbols: PRK | PRK (PHOSPHORIBULOKINASE); ATP bind...   689   0.0  
AT3G27440.1 | Symbols:  | uracil phosphoribosyltransferase, puta...    81   1e-15
AT3G27190.1 | Symbols:  | uracil phosphoribosyltransferase, puta...    77   3e-14
AT5G40870.1 | Symbols: AtUK/UPRT1 | AtUK/UPRT1 (Uridine kinase/U...    73   3e-13
AT1G55810.3 | Symbols:  | uracil phosphoribosyltransferase, puta...    72   9e-13
AT1G55810.1 | Symbols:  | uracil phosphoribosyltransferase, puta...    72   9e-13
AT1G55810.2 | Symbols:  | uracil phosphoribosyltransferase, puta...    72   9e-13
AT1G26190.1 | Symbols:  | phosphoribulokinase/uridine kinase fam...    65   1e-10
AT4G26510.2 | Symbols:  | ATP binding / kinase/ phosphotransfera...    64   2e-10
AT4G26510.1 | Symbols:  | ATP binding / kinase/ phosphotransfera...    64   2e-10
AT1G73980.1 | Symbols:  | phosphoribulokinase/uridine kinase fam...    58   1e-08

>AT1G32060.1 | Symbols: PRK | PRK (PHOSPHORIBULOKINASE); ATP binding
           / phosphoribulokinase/ protein binding |
           chr1:11532668-11534406 FORWARD
          Length = 395

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/407 (82%), Positives = 357/407 (87%), Gaps = 12/407 (2%)

Query: 1   MAICTVYTTQSLNSTCTISTPGKTHLGFNQKHVVFLNSSCGKRNXXXXXXXXXXXXXXXX 60
           MA+ T+Y+TQ+LNST  +++   +         VFL      R                 
Sbjct: 1   MAVSTIYSTQALNSTHFLTSSSSSKQ-------VFL-----YRRQPQTNRRFNTLITCAQ 48

Query: 61  ETVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLD 120
           ET+VIGLAADSGCGKSTFMRRLTSVFGGAA+PPKGGNPDSNTLISDTTTVICLDDYHSLD
Sbjct: 49  ETIVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSLD 108

Query: 121 RTGRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPPKILV 180
           R GRKE+ VTALDPRANDFDLMYEQVKA+K GI VEKPIYNHVTGLLDPPELI+PPKILV
Sbjct: 109 RYGRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGLLDPPELIQPPKILV 168

Query: 181 IEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFD 240
           IEGLHPM+D+RVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFD
Sbjct: 169 IEGLHPMFDERVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFD 228

Query: 241 AYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWIP 300
           A+IDPQKQYADAVIEVLPT LIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWIP
Sbjct: 229 AFIDPQKQYADAVIEVLPTTLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWIP 288

Query: 301 CGRKLTCSYPGIKFAYAPDTYFGHEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVT 360
           CGRKLTCSYPGIKF Y PD+YF HEVSVLEMDGQFDRLDELIYVESHLSN+STKFYGEVT
Sbjct: 289 CGRKLTCSYPGIKFNYEPDSYFDHEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVT 348

Query: 361 QQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIVASKAKTPVEAKA 407
           QQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQ++A+KA    EAKA
Sbjct: 349 QQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQLIANKATARAEAKA 395


>AT3G27440.1 | Symbols:  | uracil phosphoribosyltransferase,
           putative / UMP pyrophosphorylase, putative / UPRTase,
           putative | chr3:10155555-10157931 FORWARD
          Length = 465

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 110/232 (47%), Gaps = 23/232 (9%)

Query: 64  VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD--YHSLDR 121
           VIG+A  +  GK+T    + S                   + D   V+   D  YHSL +
Sbjct: 31  VIGVAGGTASGKTTVCNMIMS------------------QLHDQRVVLVNQDSFYHSLTK 72

Query: 122 TGRKEKGVTALD-PRANDFDLMYEQVKAIKEGIPVEKPIYN-HVTGLLDPPELIKPPKIL 179
               +      D P A + +++   ++ ++ G PV  P Y+  +   ++    + P  ++
Sbjct: 73  EKLNKVHEYNFDHPDAFNTEVLLSCMEKLRSGQPVNIPSYDFKIHQSIESSSPVNPGDVI 132

Query: 180 VIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KASIEARKPD 238
           ++EG+  + D RVRDL++  I++D   +V+ + +IQRD  ERG +++++ +   +  KP 
Sbjct: 133 ILEGILVLNDPRVRDLMNMKIFVDTDADVRLSRRIQRDTVERGRNIQNVLEQYTKFVKPS 192

Query: 239 FDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKYFSPVYLF 290
           FD YI P  +YAD +I       +  D   + +R +L      K +S +++ 
Sbjct: 193 FDEYIQPSMKYADIIIPRGGDNDVAIDLIVQHIRTKLCQHNLCKIYSNIFII 244


>AT3G27190.1 | Symbols:  | uracil phosphoribosyltransferase,
           putative / UMP pyrophosphorylase, putative / UPRTase,
           putative | chr3:10039504-10042917 REVERSE
          Length = 483

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGL--LDPPELIKPPKILVIEGLHPMYDQR 191
           P A D + +   V  +K G P + PIY+  T    +D    +    ++++EG+   +D R
Sbjct: 119 PDAFDTEQLLHCVDILKSGQPYQIPIYDFKTHQRKVDAFRQVNACDVIILEGILVFHDSR 178

Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KASIEARKPDFDAYIDPQKQYA 250
           VRDL++  I++D   +V+ A +I+RD  ERG  ++S+ +   +  KP FD ++ P K+YA
Sbjct: 179 VRDLMNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYAKFVKPAFDDFVLPSKKYA 238

Query: 251 DAVI 254
           D +I
Sbjct: 239 DVII 242


>AT5G40870.1 | Symbols: AtUK/UPRT1 | AtUK/UPRT1 (Uridine
           kinase/Uracil phosphoribosyltransferase 1); ATP binding
           / kinase/ uracil phosphoribosyltransferase/ uridine
           kinase | chr5:16375021-16378384 FORWARD
          Length = 486

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 3/124 (2%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLL--DPPELIKPPKILVIEGLHPMYDQR 191
           P A D + +    + +K G P + PIY+  T     D    +    ++++EG+   +D R
Sbjct: 119 PDAFDTEQLLHCAETLKSGQPYQVPIYDFKTHQRRSDTFRQVNASDVIILEGILVFHDSR 178

Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESI-KASIEARKPDFDAYIDPQKQYA 250
           VR+L++  I++D   +V+ A +I+RD  ERG  + S+ +   +  KP FD ++ P K+YA
Sbjct: 179 VRNLMNMKIFVDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVLPSKKYA 238

Query: 251 DAVI 254
           D +I
Sbjct: 239 DVII 242


>AT1G55810.3 | Symbols:  | uracil phosphoribosyltransferase,
           putative / UMP pyrophosphorylase, putative / UPRTase,
           putative | chr1:20861273-20864003 FORWARD
          Length = 466

 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVT--GLLDPPELIKPPKILVIEGLHPMYDQR 191
           P A D + +   ++ +++G  V+ P Y+  +    + PP  + P  ++++EG+   +D R
Sbjct: 101 PDAFDTEQLLSSMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPR 160

Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYA 250
           VRDL++  I++D   +V+ A +I+RD  E+G  + ++        KP F+ +I P K+YA
Sbjct: 161 VRDLMNMKIFVDADADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDFILPTKKYA 220

Query: 251 DAVI 254
           D +I
Sbjct: 221 DIII 224


>AT1G55810.1 | Symbols:  | uracil phosphoribosyltransferase,
           putative / UMP pyrophosphorylase, putative / UPRTase,
           putative | chr1:20861273-20864003 FORWARD
          Length = 466

 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVT--GLLDPPELIKPPKILVIEGLHPMYDQR 191
           P A D + +   ++ +++G  V+ P Y+  +    + PP  + P  ++++EG+   +D R
Sbjct: 101 PDAFDTEQLLSSMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPR 160

Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYA 250
           VRDL++  I++D   +V+ A +I+RD  E+G  + ++        KP F+ +I P K+YA
Sbjct: 161 VRDLMNMKIFVDADADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDFILPTKKYA 220

Query: 251 DAVI 254
           D +I
Sbjct: 221 DIII 224


>AT1G55810.2 | Symbols:  | uracil phosphoribosyltransferase,
           putative / UMP pyrophosphorylase, putative / UPRTase,
           putative | chr1:20861273-20864003 FORWARD
          Length = 461

 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVT--GLLDPPELIKPPKILVIEGLHPMYDQR 191
           P A D + +   ++ +++G  V+ P Y+  +    + PP  + P  ++++EG+   +D R
Sbjct: 101 PDAFDTEQLLSSMEKLRKGQAVDIPNYDFKSYKNNVFPPRRVNPSDVIILEGILIFHDPR 160

Query: 192 VRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYA 250
           VRDL++  I++D   +V+ A +I+RD  E+G  + ++        KP F+ +I P K+YA
Sbjct: 161 VRDLMNMKIFVDADADVRLARRIKRDTVEKGRDIATVLDQYSKFVKPAFEDFILPTKKYA 220

Query: 251 DAVI 254
           D +I
Sbjct: 221 DIII 224


>AT1G26190.1 | Symbols:  | phosphoribulokinase/uridine kinase family
           protein | chr1:9057285-9060433 REVERSE
          Length = 674

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 52/238 (21%)

Query: 63  VVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 122
           +++G+A  SG GK+ F  ++ +     A                   VI +D+Y+   R 
Sbjct: 66  ILVGVAGPSGAGKTVFTEKILNFLPSVA-------------------VISMDNYNDSSRI 106

Query: 123 --GRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTG------LLDPPELIK 174
             G  +      DPR  D+D + + ++ +KEG  VE PIY+  +        LD P    
Sbjct: 107 VDGNFD------DPRLTDYDTLLKNLEDLKEGKQVEVPIYDFKSSSRVGYRTLDVP---- 156

Query: 175 PPKILVIEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI-E 233
           P +I++IEG++ +  +++R LLD  + +          ++ RD+   G   E I   I E
Sbjct: 157 PSRIVIIEGIYAL-SEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQQPEEIIHQISE 215

Query: 234 ARKPDFDAYIDPQKQYADAVIEVL-----------PTQLIPDDNEGKVLRVRLIMKEG 280
              P + A+I+P  Q A   I+++           PT ++    E  V +++ ++ +G
Sbjct: 216 TVYPMYKAFIEPDLQTAQ--IKIINKFNPFTGFQSPTYILKSRKEVSVDQIKAVLSDG 271


>AT4G26510.2 | Symbols:  | ATP binding / kinase/ phosphotransferase,
           alcohol group as acceptor / uracil
           phosphoribosyltransferase | chr4:13384503-13387920
           FORWARD
          Length = 469

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDQRVR 193
           P A D + +   ++ +++G  V+ P Y+  T        + P  ++++EG+   +D RVR
Sbjct: 106 PDAFDTEHLLSCMEKLRQGQAVDIPKYDFKTYRSSVFRRVNPTDVIILEGILLFHDPRVR 165

Query: 194 DLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYADA 252
            L++  I++    +V+ A +I+RD  E G  + ++        KP FD +I P K+YAD 
Sbjct: 166 KLMNMKIFVCTDADVRLARRIKRDTVENGRDIGTVLDQYSKFVKPAFDDFILPTKKYADI 225

Query: 253 VI 254
           +I
Sbjct: 226 II 227


>AT4G26510.1 | Symbols:  | ATP binding / kinase/ phosphotransferase,
           alcohol group as acceptor / uracil
           phosphoribosyltransferase | chr4:13384503-13387920
           FORWARD
          Length = 469

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)

Query: 134 PRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDQRVR 193
           P A D + +   ++ +++G  V+ P Y+  T        + P  ++++EG+   +D RVR
Sbjct: 106 PDAFDTEHLLSCMEKLRQGQAVDIPKYDFKTYRSSVFRRVNPTDVIILEGILLFHDPRVR 165

Query: 194 DLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEA-RKPDFDAYIDPQKQYADA 252
            L++  I++    +V+ A +I+RD  E G  + ++        KP FD +I P K+YAD 
Sbjct: 166 KLMNMKIFVCTDADVRLARRIKRDTVENGRDIGTVLDQYSKFVKPAFDDFILPTKKYADI 225

Query: 253 VI 254
           +I
Sbjct: 226 II 227


>AT1G73980.1 | Symbols:  | phosphoribulokinase/uridine kinase family
           protein | chr1:27820292-27823527 REVERSE
          Length = 643

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 27/195 (13%)

Query: 63  VVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRT 122
           +++GLA  SG GK+ F  ++ +     A                   +I +D+Y+     
Sbjct: 66  ILVGLAGPSGAGKTIFTEKILNFMPSIA-------------------IINMDNYND---- 102

Query: 123 GRKEKGVTALDPRANDFDLMYEQVKAIKEGIPVEKPIYNHVTGLLDPPELIKPP--KILV 180
           G +       DPR  D+D + + +  +++G PV+ PIY+  +        ++ P  +I++
Sbjct: 103 GTRVIDGNFDDPRLTDYDTLLDNIHGLRDGKPVQVPIYDFKSSSRIGYRTLEVPSSRIVI 162

Query: 181 IEGLHPMYDQRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASI-EARKPDF 239
           +EG++ +  +++R LLD  + +          ++ RD+   G   E I   I E   P +
Sbjct: 163 LEGIYAL-SEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMY 221

Query: 240 DAYIDPQKQYADAVI 254
            A+I+P  + A   I
Sbjct: 222 KAFIEPDLKTAQIKI 236