Jatropha Genome Database

JcCB0059731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0059731.10 + phase: 0 /partial
         (252 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02570.1 | Symbols: MEE31, PMI1 | MEE31 (MATERNAL EFFECT EMBR...   273   9e-74
AT1G67070.1 | Symbols: DIN9, PMI2 | DIN9 (DARK INDUCIBLE 9); man...   267   5e-72

>AT3G02570.1 | Symbols: MEE31, PMI1 | MEE31 (MATERNAL EFFECT EMBRYO
           ARREST 31); mannose-6-phosphate isomerase |
           chr3:543463-545478 REVERSE
          Length = 432

 Score =  273 bits (698), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 137/242 (56%), Positives = 171/242 (70%), Gaps = 2/242 (0%)

Query: 11  ELKDVLRNVPELEELVGGSNAEQFLYFSEQDRDAKVKAILEYIFSQLLSSSREKIFEVIS 70
           ELK V+R +PE+EELVG   A Q    +E D + KVK+++  IF+ L+S+  +   +++S
Sbjct: 170 ELKSVIRAIPEIEELVGSEEANQVFCITEHDEE-KVKSVVRTIFTLLMSADADTTKKIVS 228

Query: 71  KIKRRLHLEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPH 130
           K+KRRLH+E QER+LTDKE+LVL+LE QYP D GVI+AF  NYVKLN GEALYLGANEPH
Sbjct: 229 KLKRRLHMESQERQLTDKERLVLKLEKQYPNDIGVISAFFFNYVKLNPGEALYLGANEPH 288

Query: 131 AYIAGECIECMANSDNVVRVGLTSKRRDIQTLLAMLEYRQGFPEILQGVSLNPYTTRYLP 190
           AY+ GEC+E MA SDNVVR GLTSK  DIQTL +ML Y+ G+PEIL+G  + PY TRYLP
Sbjct: 289 AYLFGECLEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGYPEILKGTRIRPYITRYLP 348

Query: 191 PLDEFEVDLSVIPRAAXXXXXXXXXXXXLLFIMGRGTIAAGFSKDGKAGEGEVLFVPACT 250
           P +EFEVDL  +P  A            LL + G G ++   S DG    G+VLFVPA T
Sbjct: 349 PFEEFEVDLCDLPSGASTVFPSVPGPSLLLVLQGEGRMSTEASADG-ISMGDVLFVPADT 407

Query: 251 EI 252
           EI
Sbjct: 408 EI 409


>AT1G67070.1 | Symbols: DIN9, PMI2 | DIN9 (DARK INDUCIBLE 9);
           mannose-6-phosphate isomerase | chr1:25042324-25044412
           FORWARD
          Length = 441

 Score =  267 bits (683), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 132/242 (54%), Positives = 166/242 (68%), Gaps = 1/242 (0%)

Query: 11  ELKDVLRNVPELEELVGGSNAEQFLYFSEQDRDAKVKAILEYIFSQLLSSSREKIFEVIS 70
           ELK+V+ NVPE+ ELVG   A+Q     E D D ++K+++  IF+QL+S+S  +  +V+S
Sbjct: 177 ELKEVITNVPEITELVGSKAADQIFNVHEHDEDERIKSVVRLIFTQLMSASNNETKQVVS 236

Query: 71  KIKRRLHLEMQERELTDKEQLVLRLESQYPADTGVIAAFLLNYVKLNRGEALYLGANEPH 130
           ++K RL LE + REL++KE+LVL LE QY  D GVI+AF  NYVKLN GEALYL ANEPH
Sbjct: 237 RMKNRLLLETKHRELSEKEKLVLELEKQYTGDIGVISAFFFNYVKLNPGEALYLDANEPH 296

Query: 131 AYIAGECIECMANSDNVVRVGLTSKRRDIQTLLAMLEYRQGFPEILQGVSLNPYTTRYLP 190
           AYI+G+C+ECMA SDNVVR GLT K RD+QTL +ML Y+ G+PEIL+G  L PY TRYLP
Sbjct: 297 AYISGDCVECMAASDNVVRAGLTPKHRDVQTLCSMLTYKLGYPEILKGFPLTPYVTRYLP 356

Query: 191 PLDEFEVDLSVIPRAAXXXXXXXXXXXXLLFIMGRGTIAAGFSKDGKAGEGEVLFVPACT 250
           P DEFEVD   +PR               L I G+G +  G SK      G+VLFVPA  
Sbjct: 357 PFDEFEVDHCDLPRGKSTVFPAVPGPSVYLVIEGKGQLRTGSSK-VLVNRGDVLFVPADI 415

Query: 251 EI 252
           EI
Sbjct: 416 EI 417