Jatropha Genome Database
- JcCB0059641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0059641.10 + phase: 2 /pseudo/partial
(579 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10560.1 | Symbols: PUB18, ATPUB18 | PUB18 (PLANT U-BOX 18); ... 291 1e-78
AT1G60190.1 | Symbols: | armadillo/beta-catenin repeat family p... 288 8e-78
AT3G46510.1 | Symbols: PUB13, ATPUB13 | PUB13 (PLANT U-BOX 13); ... 216 3e-56
AT3G54850.1 | Symbols: ATPUB14, PUB14 | PUB14; ubiquitin-protein... 207 2e-53
AT1G23030.1 | Symbols: | armadillo/beta-catenin repeat family p... 201 8e-52
AT1G29340.1 | Symbols: PUB17, ATPUB17 | PUB17 (PLANT U-BOX 17); ... 199 4e-51
AT2G28830.1 | Symbols: | binding / structural constituent of ri... 199 5e-51
AT1G71020.1 | Symbols: | armadillo/beta-catenin repeat family p... 199 6e-51
AT1G71020.2 | Symbols: | armadillo/beta-catenin repeat family p... 198 8e-51
AT5G01830.1 | Symbols: | armadillo/beta-catenin repeat family p... 192 6e-49
AT5G42340.1 | Symbols: | binding / ubiquitin-protein ligase | c... 177 2e-44
AT3G07360.1 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9); ubiq... 138 8e-33
AT5G67340.1 | Symbols: | armadillo/beta-catenin repeat family p... 122 7e-28
AT4G21350.1 | Symbols: B80, PUB8 | PUB8 (PLANT U-BOX 8); binding... 121 1e-27
AT2G23140.1 | Symbols: | binding / ubiquitin-protein ligase | c... 118 9e-27
AT2G35930.1 | Symbols: PUB23 | PUB23 (PLANT U-BOX 23); ubiquitin... 108 7e-24
AT1G24330.1 | Symbols: | armadillo/beta-catenin repeat family p... 103 2e-22
AT5G65920.1 | Symbols: | U-box domain-containing protein | chr5... 102 6e-22
AT1G49780.1 | Symbols: PUB26 | PUB26 (PLANT U-BOX 26); binding /... 101 1e-21
AT3G19380.1 | Symbols: PUB25 | PUB25 (PLANT U-BOX 25); binding /... 100 2e-21
AT3G49810.1 | Symbols: | U-box domain-containing protein | chr3... 100 2e-21
AT1G27910.1 | Symbols: PUB45, ATPUB45 | PUB45 (PLANT U-BOX 45); ... 97 3e-20
AT5G18320.1 | Symbols: | armadillo/beta-catenin repeat family p... 96 5e-20
AT3G54790.2 | Symbols: | armadillo/beta-catenin repeat family p... 96 6e-20
AT3G54790.1 | Symbols: | armadillo/beta-catenin repeat family p... 96 7e-20
AT1G67530.2 | Symbols: | armadillo/beta-catenin repeat family p... 93 5e-19
AT1G67530.1 | Symbols: | armadillo/beta-catenin repeat family p... 93 5e-19
AT3G52450.1 | Symbols: PUB22 | PUB22 (PLANT U-BOX 22); ubiquitin... 91 3e-18
AT5G37490.1 | Symbols: | U-box domain-containing protein | chr5... 89 9e-18
AT5G58680.1 | Symbols: | armadillo/beta-catenin repeat family p... 89 1e-17
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | U-box domain-containing ... 88 1e-17
AT3G01400.1 | Symbols: | armadillo/beta-catenin repeat family p... 87 2e-17
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | U-box domain-containing ... 83 5e-16
AT5G09800.1 | Symbols: | U-box domain-containing protein | chr5... 82 8e-16
AT3G18710.1 | Symbols: PUB29, ATPUB29 | PUB29 (PLANT U-BOX 29); ... 81 2e-15
AT1G68940.2 | Symbols: | armadillo/beta-catenin repeat protein-... 78 1e-14
AT1G68940.1 | Symbols: | armadillo/beta-catenin repeat protein-... 78 2e-14
AT1G68940.3 | Symbols: | armadillo/beta-catenin repeat protein-... 78 2e-14
AT4G36550.1 | Symbols: | binding / ubiquitin-protein ligase | c... 76 6e-14
AT5G18330.1 | Symbols: | U-box domain-containing protein | chr5... 75 1e-13
AT3G11840.1 | Symbols: PUB24 | PUB24 (PLANT U-BOX 24); binding /... 75 2e-13
AT1G01680.1 | Symbols: | U-box domain-containing protein | chr1... 74 2e-13
AT5G18340.1 | Symbols: | U-box domain-containing protein | chr5... 72 7e-13
AT4G16490.1 | Symbols: | binding | chr4:9293891-9295530 REVERSE 72 8e-13
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 69 7e-12
AT1G76390.2 | Symbols: | armadillo/beta-catenin repeat family p... 69 8e-12
AT1G76390.1 | Symbols: | armadillo/beta-catenin repeat family p... 69 8e-12
AT5G57035.1 | Symbols: | ATP binding / kinase/ protein kinase/ ... 66 5e-11
AT1G08315.1 | Symbols: | armadillo/beta-catenin repeat family p... 66 7e-11
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | SAUL1 (SENESCENCE... 64 2e-10
AT3G61390.2 | Symbols: | U-box domain-containing protein | chr3... 64 4e-10
AT1G01660.1 | Symbols: | U-box domain-containing protein | chr1... 61 2e-09
AT1G56040.1 | Symbols: | binding / protein binding / ubiquitin-... 60 3e-09
AT3G07360.3 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9) | chr... 59 1e-08
AT3G07360.2 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9) | chr... 59 1e-08
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | U-box domain-containing ... 59 1e-08
AT5G62560.1 | Symbols: | armadillo/beta-catenin repeat family p... 56 5e-08
AT2G44900.1 | Symbols: | armadillo/beta-catenin repeat family p... 56 8e-08
AT3G49060.1 | Symbols: | protein kinase family protein / U-box ... 55 1e-07
AT5G51270.1 | Symbols: | protein kinase family protein | chr5:2... 55 1e-07
AT5G65500.1 | Symbols: | ATP binding / kinase/ protein kinase/ ... 55 1e-07
AT1G01670.1 | Symbols: | U-box domain-containing protein | chr1... 55 1e-07
AT3G47820.1 | Symbols: | armadillo/beta-catenin repeat family p... 55 2e-07
AT4G25160.1 | Symbols: | protein kinase family protein | chr4:1... 54 2e-07
AT2G45910.1 | Symbols: | protein kinase family protein / U-box ... 54 3e-07
AT2G19410.1 | Symbols: | protein kinase family protein | chr2:8... 54 3e-07
AT5G65200.1 | Symbols: PUB38, ATPUB38 | PUB38 (PLANT U-BOX 38); ... 54 3e-07
AT3G60350.1 | Symbols: | armadillo/beta-catenin repeat family p... 50 3e-06
AT3G03440.1 | Symbols: | armadillo/beta-catenin repeat family p... 49 7e-06
AT4G12710.1 | Symbols: | armadillo/beta-catenin repeat family p... 49 9e-06
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | PUB18 (PLANT U-BOX 18);
ubiquitin-protein ligase | chr1:3484613-3486706 FORWARD
Length = 697
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 239/394 (60%), Gaps = 13/394 (3%)
Query: 192 DCSFVKRVLDYLEIRSWSDCXXXXXXXXXXXXXQCSDCDEK----EVPFLSSLLGLMSYC 247
D + R+LD++ IR W DC + D +K +V LSSL+G + YC
Sbjct: 197 DPDEINRILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELLSSLMGFICYC 256
Query: 248 RGVIFEKL--DNRITDHID-MKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRS 304
R +I ++ D+ H D +K + + + L ED CPISLEIMTDPV + TG TYDRS
Sbjct: 257 RCIILGRIERDDHHNHHEDGIKKDHDLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRS 316
Query: 305 SIEKWFKAGNMLCPKTGEKLKNTELVPNTTLRKLIQQFCNDNGISLTKSGNRNRDITRTI 364
SI KWF +GN+ CP TG+ L +TELV N ++R++I++ C NGI L +R R +
Sbjct: 317 SITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGI-SRRRKSHDDV 375
Query: 365 IPGSPAAAEAMKFLSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPL 424
+P S AA A K ++++L L+ G + +A EIR+ K++ FNR CL+ AG + PL
Sbjct: 376 VPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPL 435
Query: 425 INLLSSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAA 484
+ LLSS D IQENA+ +L LSKH GK I GLK ++ +L +G E + +A+
Sbjct: 436 LKLLSS-VDIRIQENAMAGILNLSKHVTGKSKIAGE-GLKILVEILNEGAKTETRLYSAS 493
Query: 485 TIFYLASIKGHRKLIGETPEAIPALVELIK--DKPTNGKKNAVAAIFALLLHPGNHQKVL 542
+FYL+S++ + +LIGE P+AIP L+ ++K D + K++A+ A+ LL+ NH +VL
Sbjct: 494 ALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVL 553
Query: 543 ASGIIPLLIDLLRSSD-KDELIADSLAVIAALAE 575
A+G +P+L+DLLRS + L AD LA +A LAE
Sbjct: 554 AAGAVPILLDLLRSGEISGGLTADCLATLAKLAE 587
>AT1G60190.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:22198403-22200463 FORWARD
Length = 686
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 236/384 (61%), Gaps = 14/384 (3%)
Query: 198 RVLDYLEIRSWSDCXXXXXXXXXXXXXQCSDCDEKEVPFLSSLLGLMSYCRGVIFEKLDN 257
RVLD++ +R W DC E+ LS+L+G + YCR VI +D
Sbjct: 202 RVLDHIGVRKWRDCVKEIDFLREEI--SVGKKSNIEIELLSNLMGFICYCRCVILRGIDV 259
Query: 258 RITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLC 317
+ + + + LN +D RCPISLEIM+DPV + +G TYDRSSI KWF +GN+ C
Sbjct: 260 DDEEKDKEEDDLMMVRSLNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITC 319
Query: 318 PKTGEKLKNTELVPNTTLRKLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKF 377
PKTG+ L +T LV N +++++IQ + NG+ + + G + D+ ++ AA EA K
Sbjct: 320 PKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKKKVDVAESL-----AAEEAGKL 374
Query: 378 LSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQ 437
+ +LA L+ G +E KA EIR+L K++ F R CL++AG + L+ +L S D IQ
Sbjct: 375 TAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRS-DDPRIQ 433
Query: 438 ENAIGALLKLSKHTNGKKLII--DSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGH 495
ENA+ ++ LSK GK I+ D GGL+ I+ VL G E++Q AAA +FYL+S+ +
Sbjct: 434 ENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDY 493
Query: 496 RKLIGETPEAIPALVELIK--DKPTNGKKNAVAAIFALLL-HPGNHQKVLASGIIPLLID 552
+LIGE +AIP LV ++K D + K+NA+ AI +LL+ P NH ++LA+GI+P+L+D
Sbjct: 494 SRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLD 553
Query: 553 LLRSSD-KDELIADSLAVIAALAE 575
L++S + D + ADS+A++A +AE
Sbjct: 554 LVKSEEISDGVTADSMAILAKMAE 577
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | PUB13 (PLANT U-BOX 13);
ubiquitin-protein ligase | chr3:17124106-17126539
REVERSE
Length = 660
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/300 (44%), Positives = 184/300 (61%), Gaps = 13/300 (4%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P+DFRCPISLE+M DPV VS+GQTY+R+ IEKW + G+ CPKT + L +T L PN LR
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLR 316
Query: 337 KLIQQFCNDNGISLTK--SGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEK 394
LI Q+C N I K S R R ++ P AEA K L RL +G+ +++
Sbjct: 317 SLIAQWCEANDIEPPKPPSSLRPRKVSSFSSP-----AEANKI--EDLMWRLAYGNPEDQ 369
Query: 395 NKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGK 454
AA EIRLLAK N NR + +AG I L+ LLS+ PD+ IQE+++ ALL LS N K
Sbjct: 370 RSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLST-PDSRIQEHSVTALLNLSICENNK 428
Query: 455 KLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIK 514
I+ +G + I+ VL KG S EA++ AAAT+F L+ I ++ IG AIP LV L+
Sbjct: 429 GAIVSAGAIPGIVQVLKKG-SMEARENAAATLFSLSVIDENKVTIGALG-AIPPLVVLLN 486
Query: 515 DKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVIAALA 574
+ GKK+A A+F L ++ GN K + +G+IP L LL + ++ ++LA++A L+
Sbjct: 487 EGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLL-TEPGSGMVDEALAILAILS 545
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | PUB14; ubiquitin-protein
ligase | chr3:20321524-20323848 FORWARD
Length = 632
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/298 (41%), Positives = 181/298 (60%), Gaps = 8/298 (2%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
PE FRCPISLE+M DPV VSTGQTY+RSSI+KW AG+ CPK+ E L + L PN L+
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 308
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
LI +C NGI L + N+ RT G ++++ + L +L G+ +++
Sbjct: 309 SLIALWCESNGIELPQ----NQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRA 364
Query: 397 AAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKL 456
AA E+RLLAK N+ NR C+ +AG I L+ LLSS PD QE+++ ALL LS + K
Sbjct: 365 AAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSS-PDPRTQEHSVTALLNLSINEGNKGA 423
Query: 457 IIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDK 516
I+D+G + I+ VL G S EA++ AAAT+F L+ I K+ AI AL+ L+++
Sbjct: 424 IVDAGAITDIVEVLKNG-SMEARENAAATLFSLSVID-ENKVAIGAAGAIQALISLLEEG 481
Query: 517 PTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVIAALA 574
GKK+A AIF L ++ GN + + GI+ L LL+ + ++ ++LA++A L+
Sbjct: 482 TRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGG-MVDEALAILAILS 538
>AT1G23030.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:8156745-8158842 FORWARD
Length = 612
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 191/322 (59%), Gaps = 16/322 (4%)
Query: 253 EKLDNRITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA 312
++LD + + D ++ L+ P DF CP+SLE+M DPV V+TGQTY+R+ I++W
Sbjct: 220 DRLDKMVNKNTDESKKSDKLTI--PVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDC 277
Query: 313 GNMLCPKTGEKLKNTELVPNTTLRKLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAA 372
GN+ CPKT +KL+N L PN LR LI ++C ++ I I G +
Sbjct: 278 GNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAG----------YINGRTKNS 327
Query: 373 EAMKFLSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRP 432
M + R L +RL S +++ A EIR L+K + NR + +AG I L+NLL+S
Sbjct: 328 GDMSVI-RALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSE- 385
Query: 433 DNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASI 492
D + QENAI +L LS + N K+LI+ +G + I+ VL G + EA++ AAAT+F L+
Sbjct: 386 DVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAG-TMEARENAAATLFSLSLA 444
Query: 493 KGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLID 552
++ +IG + AIPALV+L+++ GKK+A A+F L ++ GN + + +GI+ L+
Sbjct: 445 DENKIIIGGSG-AIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVK 503
Query: 553 LLRSSDKDELIADSLAVIAALA 574
+L S + ++ ++L +++ LA
Sbjct: 504 MLSDSTRHRMVDEALTILSVLA 525
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | PUB17 (PLANT U-BOX 17);
ubiquitin-protein ligase | chr1:10264412-10266601
FORWARD
Length = 729
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 179/286 (62%), Gaps = 12/286 (4%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P+DF CPISL++MTDPV +STGQTYDR+SI +W + G+ CPKTG+ L ++ +VPN L+
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALK 365
Query: 337 KLIQQFCNDNGIS----LTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRD 392
LI Q+C +GIS T S N + + +P + AA EA K L + L GS+
Sbjct: 366 NLIVQWCTASGISYESEFTDSPNES---FASALP-TKAAVEANKATVSILIKYLADGSQA 421
Query: 393 EKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSI-QENAIGALLKLSKHT 451
+ AA EIRLLAK+ NR + +AG I L LL+S +N+I QEN++ A+L LS +
Sbjct: 422 AQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTS--ENAIAQENSVTAMLNLSIYE 479
Query: 452 NGKKLIIDSGG-LKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALV 510
K I++ G L+ I++VL+ GL+ EA++ AAAT+F L+++ ++K I + + AL
Sbjct: 480 KNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALA 539
Query: 511 ELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRS 556
L+++ GKK+AV A++ L HP N +++ G + L+ L++
Sbjct: 540 LLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN 585
>AT2G28830.1 | Symbols: | binding / structural constituent of
ribosome / ubiquitin-protein ligase |
chr2:12367001-12370608 REVERSE
Length = 962
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 179/299 (59%), Gaps = 6/299 (2%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
PE+FRCPISLE+MTDPV VS+GQTY+R I+KW + G++ CPKT E L + + PN LR
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
LI Q+C NGI K N ++ ++ S E K L +L +++
Sbjct: 317 SLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKI--EELLLKLTSQQPEDRRS 374
Query: 397 AAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSK-HTNGKK 455
AA EIRLLAK N NR + +G I L+NLL+ D+ QE+A+ ++L LS N K
Sbjct: 375 AAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGK 434
Query: 456 LIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKD 515
++ SG + I+ VL KG S EA++ AAAT+F L+ I ++ IG AIP LV L+ +
Sbjct: 435 IVYSSGAVPGIVHVLQKG-SMEARENAAATLFSLSVIDENKVTIG-AAGAIPPLVTLLSE 492
Query: 516 KPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVIAALA 574
GKK+A A+F L + GN K + +G++P+L+ LL + + ++ +SL+++A L+
Sbjct: 493 GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLL-TEPESGMVDESLSILAILS 550
>AT1G71020.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:26790825-26793105 REVERSE
Length = 628
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 191/330 (57%), Gaps = 15/330 (4%)
Query: 253 EKLDNRITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA 312
E+L+ +T++ D ++ L+ PEDF CPISLE+M DP VSTGQTY+RS I++W
Sbjct: 222 ERLEKAVTENSDDSQKSDNLTI--PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDC 279
Query: 313 GNMLCPKTGEKLKNTELVPNTTLRKLIQQFCNDNGI----SLTKSGNRNRDITRTIIPGS 368
GN+ CPKT +KL+N L PN LR LI Q+C + I +N D + + G
Sbjct: 280 GNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGD 339
Query: 369 PAAAEAMKFLSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLL 428
+A R L +L S +++ A EIR L+K + NR + +AG I L+ LL
Sbjct: 340 MSAI-------RALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLL 392
Query: 429 SSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFY 488
+S D QENA+ +L LS + + K+LI+ +G + I+ VL G S EA++ AAAT+F
Sbjct: 393 TSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAG-SMEARENAAATLFS 451
Query: 489 LASIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIP 548
L+ ++ +IG + AI ALV+L++ GKK+A A+F L ++ GN + + +GI+
Sbjct: 452 LSLADENKIIIGASG-AIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVK 510
Query: 549 LLIDLLRSSDKDELIADSLAVIAALAESSI 578
L+ +L S + + ++L +++ LA + +
Sbjct: 511 PLVKMLTDSSSERMADEALTILSVLASNQV 540
>AT1G71020.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:26790825-26792357 REVERSE
Length = 480
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 191/330 (57%), Gaps = 15/330 (4%)
Query: 253 EKLDNRITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA 312
E+L+ +T++ D ++ L+ PEDF CPISLE+M DP VSTGQTY+RS I++W
Sbjct: 74 ERLEKAVTENSDDSQKSDNLTI--PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDC 131
Query: 313 GNMLCPKTGEKLKNTELVPNTTLRKLIQQFCNDNGI----SLTKSGNRNRDITRTIIPGS 368
GN+ CPKT +KL+N L PN LR LI Q+C + I +N D + + G
Sbjct: 132 GNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGD 191
Query: 369 PAAAEAMKFLSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLL 428
+A R L +L S +++ A EIR L+K + NR + +AG I L+ LL
Sbjct: 192 MSAI-------RALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLL 244
Query: 429 SSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFY 488
+S D QENA+ +L LS + + K+LI+ +G + I+ VL G S EA++ AAAT+F
Sbjct: 245 TSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAG-SMEARENAAATLFS 303
Query: 489 LASIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIP 548
L+ ++ +IG + AI ALV+L++ GKK+A A+F L ++ GN + + +GI+
Sbjct: 304 LSLADENKIIIGASG-AIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVK 362
Query: 549 LLIDLLRSSDKDELIADSLAVIAALAESSI 578
L+ +L S + + ++L +++ LA + +
Sbjct: 363 PLVKMLTDSSSERMADEALTILSVLASNQV 392
>AT5G01830.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr5:320983-323007 FORWARD
Length = 674
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 182/325 (56%), Gaps = 26/325 (8%)
Query: 230 DEKEVPFLSSLLGLMSYCRGVIFEKLDNRITDHIDMKCNTETLSCLN-PEDFRCPISLEI 288
D++ +SL+GL+ Y + V++ T D + + ++LS N P DFRCPI+LE+
Sbjct: 232 DDRSKSAAASLIGLVRYSKCVLY----GPSTPAPDFRRH-QSLSDANIPADFRCPITLEL 286
Query: 289 MTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLRKLIQQFCNDNGI 348
M DPV V+TGQTYDR SI+ W ++G+ CPKTG+ LK+T LVPN L+ LI +C D I
Sbjct: 287 MRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKI 346
Query: 349 SLTKSGNRNRDITRTIIPGSPA----AAEAMKFLSRYLARRLVFGSRDEKNKAAYEIRLL 404
G+ G PA A E K + +L +L S + N +E+R L
Sbjct: 347 PFELYGDGG---------GEPAPCKEAVEFTKMMVSFLIEKL---SVADSNGVVFELRAL 394
Query: 405 AKSNIFNRCCLIDAGTILPLINLLSSR-PDNSIQENAIGALLKLSKHTNGKKLIIDS-GG 462
AKS+ R C+ +AG I L+ L++ P S+Q NA+ +L LS K I+++ G
Sbjct: 395 AKSDTVARACIAEAGAIPKLVRYLATECP--SLQINAVTTILNLSILEQNKTRIMETDGA 452
Query: 463 LKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNGKK 522
L +I VL G ++EAK AAAT+F LA + +R+ +G + LV+L K PT+ K+
Sbjct: 453 LNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKR 512
Query: 523 NAVAAIFALLLHPGNHQKVLASGII 547
+A+ AI L+ N + + +G++
Sbjct: 513 DALVAILNLVAERENVGRFVEAGVM 537
>AT5G42340.1 | Symbols: | binding / ubiquitin-protein ligase |
chr5:16928086-16930367 REVERSE
Length = 660
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 159/282 (56%), Gaps = 15/282 (5%)
Query: 266 KCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLK 325
K T++ S + P +F CPI+LEIM DPV ++TGQTY++ SI+KWF AG+ CPKT ++L
Sbjct: 280 KAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELD 339
Query: 326 NTELVPNTTLRKLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARR 385
+ L PN L+ LI Q+C N + + SP + K L
Sbjct: 340 HLSLAPNFALKNLIMQWCEKNNFKIPEK------------EVSPDSQNEQKDEVSLLVEA 387
Query: 386 LVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALL 445
L +E+ ++ ++RLLA+ N NR + +AG I PL+ L S PD+ IQENA+ LL
Sbjct: 388 LSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAI-PLLVQLLSYPDSGIQENAVTTLL 446
Query: 446 KLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEA 505
LS KKLI + G + II +L G + EA++ +AA +F L+ + ++ IG
Sbjct: 447 NLSIDEVNKKLISNEGAIPNIIEILENG-NREARENSAAALFSLSMLDENKVTIG-LSNG 504
Query: 506 IPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGII 547
IP LV+L++ GKK+A+ A+F L L+ N + + +GI+
Sbjct: 505 IPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIV 546
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9);
ubiquitin-protein ligase | chr3:2354884-2356613 FORWARD
Length = 460
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 159/291 (54%), Gaps = 25/291 (8%)
Query: 270 ETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTEL 329
ET+SC PE+FRCP+S E+M DPV +++GQTYD+ I+KW +GN CPKT + L +T L
Sbjct: 70 ETVSC--PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTAL 127
Query: 330 VPNTTLRKLIQQFCNDNGISLTKSG------NRNRDITRTIIPGSPAAAEAMKFLSRYLA 383
PN +R++I ++C NG+ TKS N + +TR+ + + L
Sbjct: 128 TPNLLIREMISKWCKKNGLE-TKSQYHPNLVNEDETVTRS----------DREIFNSLLC 176
Query: 384 RRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDA-GTILPLIN--LLSSRPDNSIQENA 440
+ +D+K+ AA E+RLL + R ++ I L+N L S PD +QE+
Sbjct: 177 KVSSSNLQDQKS-AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDV 235
Query: 441 IGALLKLSKHTN-GKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLI 499
+ LL +S H + KKL+ ++ + P++ ++ + + AAA IF L+++ ++ LI
Sbjct: 236 VTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLI 295
Query: 500 GETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLL 550
G++ P L++L+++ K+ AAIF L + N + + G + +L
Sbjct: 296 GKSGILKP-LIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVL 345
>AT5G67340.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr5:26864996-26867450 FORWARD
Length = 707
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 174/378 (46%), Gaps = 84/378 (22%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEK---------------------------- 308
P DFRC +SLE+MTDPV V++GQT++R I+K
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 309 -----WFKAGNMLCPKTGEKLKNTELVP--------------------NTTLRKLIQQFC 343
W + N+ P E + ++E P LR++ +
Sbjct: 301 AFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVFSRSA 360
Query: 344 NDNGI-----SLTKSGNR---NRDITRT----------------IIPGS---PAAAEAMK 376
+ GI TK N +R +TR+ IIP + ++ +++
Sbjct: 361 SAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSSSIE 420
Query: 377 FLSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSI 436
+ L L S D + +A IR+LA+++ NR + I L++LL S D I
Sbjct: 421 TEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYST-DERI 479
Query: 437 QENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHR 496
Q +A+ LL LS + N K LI +SG + P+I VL G EAK +AAT+F L+ I+ ++
Sbjct: 480 QADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYK 539
Query: 497 KLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRS 556
IGE AI LV+L+ +GKK+A A+F L +H N KV+ +G + L++L+
Sbjct: 540 TEIGEAG-AIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDP 598
Query: 557 SDKDELIADSLAVIAALA 574
+ ++ ++ V+A LA
Sbjct: 599 AFG--MVEKAVVVLANLA 614
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 417 DAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSY 476
+AG I PL++LL S S +++A AL LS H K +I++G ++ ++ ++
Sbjct: 544 EAGAIEPLVDLLGSG-SLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGM 602
Query: 477 EAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLH-P 535
K A + LA+++ + IGE IP LVE+++ GK+NA AA+ L H P
Sbjct: 603 VEK--AVVVLANLATVREGKIAIGEEG-GIPVLVEVVELGSARGKENATAALLQLCTHSP 659
Query: 536 GNHQKVLASGIIPLLIDLLRS 556
V+ G+IP L+ L +S
Sbjct: 660 KFCNNVIREGVIPPLVALTKS 680
>AT4G21350.1 | Symbols: B80, PUB8 | PUB8 (PLANT U-BOX 8); binding /
protein binding / ubiquitin-protein ligase/ zinc ion
binding | chr4:11356143-11357267 REVERSE
Length = 374
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 145/279 (51%), Gaps = 20/279 (7%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTE-LVPNTTL 335
P DFRCPISLEIM+DPV + +G T+DR SI++W +GN CP T L T L+PN L
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 336 RKLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKN 395
R LI F + +SL K +R R E S+ L LV S +
Sbjct: 66 RSLILNFAH---VSL-KESSRPR-----------TQQEHSHSQSQALISTLVSQSSSNAS 110
Query: 396 KAAYEIRL--LAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNG 453
K RL L K + R + ++G + ++ + S + +QE ++ LL LS +
Sbjct: 111 KLESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDS-CNQVLQEKSLSLLLNLSLEDDN 169
Query: 454 KKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELI 513
K ++ G ++ I+ VL G S + K IAA + LA ++ ++ IG P+AI ALV L+
Sbjct: 170 KVGLVADGVIRRIVTVLRVG-SPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLL 228
Query: 514 KDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLID 552
+ +K + A++AL P N ++V+ G +P+L++
Sbjct: 229 RVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVE 267
>AT2G23140.1 | Symbols: | binding / ubiquitin-protein ligase |
chr2:9845696-9849105 REVERSE
Length = 829
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 121/195 (62%), Gaps = 5/195 (2%)
Query: 380 RYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQEN 439
+ L L S D + +A E+RLLAK N+ NR + ++G I+ L+ LL S D++ QEN
Sbjct: 547 KKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYST-DSATQEN 605
Query: 440 AIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLI 499
A+ ALL LS + N KK I D+G ++P+I VL G S EAK+ +AAT+F L+ I+ ++ I
Sbjct: 606 AVTALLNLSINDNNKKAIADAGAIEPLIHVLENG-SSEAKENSAATLFSLSVIEENKIKI 664
Query: 500 GETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDK 559
G++ AI LV+L+ + GKK+A A+F L +H N ++ SG + LIDL+ +
Sbjct: 665 GQSG-AIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAG 723
Query: 560 DELIADSLAVIAALA 574
++ ++AV+A LA
Sbjct: 724 --MVDKAVAVLANLA 736
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%)
Query: 257 NRITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNML 316
NR+ + + + T+T S DF CP+SLE+MTDPV VS+GQTY+++ I++W G +
Sbjct: 214 NRMHERLLLIKQTQTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKV 273
Query: 317 CPKTGEKLKNTELVPNTTLRKLIQQFCNDNGISL 350
CPKT + L +T L+PN T++ LI +C N + L
Sbjct: 274 CPKTRQTLTHTTLIPNYTVKALIANWCETNDVKL 307
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 411 NRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVL 470
N+ + +G I PL++LL + +++A AL LS H K +I+ SG ++ +I ++
Sbjct: 660 NKIKIGQSGAIGPLVDLLGNGTPRG-KKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM 718
Query: 471 IKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFA 530
K A A + LA+I R IG+ IP LVE+++ GK+NA AA+
Sbjct: 719 DPAAGMVDK--AVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENAAAALLQ 775
Query: 531 LLLHPGNH-QKVLASGIIPLLIDLLRS 556
L + G VL G +P L+ L +S
Sbjct: 776 LSTNSGRFCNMVLQEGAVPPLVALSQS 802
>AT2G35930.1 | Symbols: PUB23 | PUB23 (PLANT U-BOX 23);
ubiquitin-protein ligase | chr2:15083101-15084336
REVERSE
Length = 411
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 20/284 (7%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNM-LCPKTGEKLKNTELVPNTTL 335
P F CPISLEIM DPV VSTG TYDR SIEKW AG CP T + + + +L PN TL
Sbjct: 13 PPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTL 72
Query: 336 RKLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKN 395
R+LIQ +C N + + R P P ++ L R A S + +
Sbjct: 73 RRLIQSWCTLNA---------SYGVERIPTPRPPICKSEIEKLIRDSA-----SSHENQV 118
Query: 396 KAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDN-SIQENAIGALLKLSKHTNGK 454
K +R + N N+ CL AG L N++S+ +N S+ + A+ L L
Sbjct: 119 KCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVL 178
Query: 455 KLIIDSGGLKPIIAVLIKGLS---YEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVE 511
K ++++ I+ L K + YE++ A + + + + + PE +V+
Sbjct: 179 KNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQ 238
Query: 512 LIKDKPTNGKKNAVAAIFALLLHPG-NHQKVLASGIIPLLIDLL 554
++ D+ + A I + G N K + +G+I ++I+LL
Sbjct: 239 ILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELL 282
>AT1G24330.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein |
chr1:8631779-8634835 FORWARD
Length = 771
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 159/352 (45%), Gaps = 56/352 (15%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
PE+ RCPISL++M DPV +++GQTY+R IEKWF G+ CPKT ++L + L PN ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRY------------LAR 384
LI +C NGI++ + D+ + S + + K + L
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEE 395
Query: 385 RLVFGS---RDEKNKAAYEI---------------------------------RLLAKSN 408
S + EKN A E+ R+L K N
Sbjct: 396 SSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDN 455
Query: 409 IFNRCCLIDAGTILPLINLL-SSRPDN--SIQENAIGALLKLSKHTNGKKLIIDSGGLKP 465
R + G + + L S+ DN + QE AL L+ + N K ++ + G+ P
Sbjct: 456 EEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIP 515
Query: 466 IIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVE-LIKDKPTNGKKNA 524
++ +I +++ A A L+ ++ + +IG + +A+ V L++D T K +A
Sbjct: 516 LLEKMIS--CSQSQGPATALYLNLSCLEKAKPVIGSS-QAVSFFVNLLLQDTKTQCKLDA 572
Query: 525 VAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVIAALAES 576
+ A++ L + N +L+S II L +L S+ I SLAV+ LA S
Sbjct: 573 LHALYNLSTYSPNIPTLLSSNIIKSL-QVLASTGNHLWIEKSLAVLLNLASS 623
>AT5G65920.1 | Symbols: | U-box domain-containing protein |
chr5:26364323-26365657 REVERSE
Length = 444
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 27/301 (8%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F CPISLE M DPVT+ TGQTY+RS+I KWF G+ CP T ++L + + PN TL
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLH 120
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
+LI + + + + K R+ D+ A E + L + + K
Sbjct: 121 QLIYTWFSQKYVLMKK---RSEDV-------QGRAIEILGTLRKAKGK--------AKVH 162
Query: 397 AAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKL 456
A E++ + ++ + ++D G + + +LLS +++ AI L+ L ++ K
Sbjct: 163 ALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAG 222
Query: 457 IIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDK 516
++ + ++ +L G S E K A I L KG R + + + L+ L+KD+
Sbjct: 223 LMQPARVSLMVDMLNDG-SIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDR 281
Query: 517 PTNGKKNAVAAIFALLLHPGNHQKV----LASGIIPLLIDLLRSSDKDELIADSLAVIAA 572
++N V+ LL H++V + G +P L+D+L D E + +L V+ +
Sbjct: 282 R---RRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDV-ECLESALFVLDS 337
Query: 573 L 573
L
Sbjct: 338 L 338
>AT1G49780.1 | Symbols: PUB26 | PUB26 (PLANT U-BOX 26); binding /
ubiquitin-protein ligase | chr1:18429024-18430289
REVERSE
Length = 421
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P FRCPISL++M+DPVT+STGQTYDR+SI+ W GN CP T L + L+PN TLR
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLR 74
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMK-FLSRYLARRLVFGSRDEKN 395
+LIQ++C NR+ + R P PA +++ LS+ A S +
Sbjct: 75 RLIQEWC---------VANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRA 125
Query: 396 KAAYEIRLLAKSNIFNR 412
A +R LA+ + NR
Sbjct: 126 AAIRRLRGLARDSEKNR 142
>AT3G19380.1 | Symbols: PUB25 | PUB25 (PLANT U-BOX 25); binding /
ubiquitin-protein ligase | chr3:6714602-6715867 REVERSE
Length = 421
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 138/291 (47%), Gaps = 26/291 (8%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAG-NMLCPKTGEKLKNTELVPNTTL 335
P FRCPISLE+M DPVTV TGQTYDR+SIE W G N CP T L + L+PN TL
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 336 RKLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMK-FLSRYLARRLVFGSRDEK 394
R+LIQ++C NR+ + R P PA +++ LS+ A S +
Sbjct: 75 RRLIQEWC---------VANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSR 125
Query: 395 NKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNS--IQEN-AIGALLKLSKHT 451
A +R A+ + NR + LI +L S +S + E+ A+ +L +++
Sbjct: 126 AAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPN 185
Query: 452 NGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYL------ASIKGHRKLIGETPEA 505
+ D G ++ + +L S E + AAA I + A +KG I +
Sbjct: 186 QFVSISSDPGRVEFLTRLLFDS-SIETRVNAAALIEIVSTGTKSADLKGS---ISNSESV 241
Query: 506 IPALVELIKDKPTNGK--KNAVAAIFALLLHPGNHQKVLASGIIPLLIDLL 554
+++L+++ ++ + K + +FAL + +G +LID L
Sbjct: 242 FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRL 292
>AT3G49810.1 | Symbols: | U-box domain-containing protein |
chr3:18474936-18476282 REVERSE
Length = 448
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 21/298 (7%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F CPISLE M DPVT+ TGQTY+R +I KWF G++ CP T ++L + + PN TL
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
LI + + + + K R+ D+ A E + L + + V
Sbjct: 125 HLIYTWFSQKYVLMKK---RSEDV-------QGRAIEILGTLKKAKGQARVH-------- 166
Query: 397 AAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKL 456
A E++ + +++ R +++ G + + +LL +++ + L+ L ++ K
Sbjct: 167 ALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSG 226
Query: 457 IIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDK 516
++ + I+ +L G S E K A I L KG R + + + L+ L+KDK
Sbjct: 227 LMQPAKVSLIVDMLNDG-SNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDK 285
Query: 517 -PTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVIAAL 573
NG A+ + + +H +++ G +P L+D+L S D E + +L V+ AL
Sbjct: 286 RHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDP-ECLELALFVLDAL 342
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | PUB45 (PLANT U-BOX 45);
ubiquitin-protein ligase | chr1:9720962-9723975 REVERSE
Length = 768
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 169/377 (44%), Gaps = 56/377 (14%)
Query: 234 VPFLSSLLGLMSYCRGVIFEKLDNRITDHIDMKCNTETLSC---LNPEDFRCPISLEIMT 290
+P ++ G + G F++ ++++ CN S + PE+ RCPISL++M
Sbjct: 234 LPCSPTIQGSIDDAHGRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMY 293
Query: 291 DPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLRKLIQQFCNDNGISL 350
DPV +++GQTY+R IEKWF G+ CPKT ++L + L PN ++ LI +C NG+ +
Sbjct: 294 DPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQNGVQV 353
Query: 351 TKSGNRNRDI--------------TRT-------------IIPGSPAAA---EAMKFLSR 380
+ D+ TR+ ++P + EA + S
Sbjct: 354 PDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKEEACE--SE 411
Query: 381 YLARRLVFGSR--------------DEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLIN 426
Y ++ R +K + +IR+L K + R + + G + L+
Sbjct: 412 YQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQ 471
Query: 427 LLSS---RPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAA 483
L S + S Q+ AL L+ N K ++ + G+ P++ ++ + +
Sbjct: 472 FLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEML--CNPHSHGSVT 529
Query: 484 ATIFYLASIKGHRKLIGETPEAIPALVELI-KDKPTNGKKNAVAAIFALLLHPGNHQKVL 542
A L+ ++ + +IG + A+P +V L+ + K +A+ ++F L +P N +L
Sbjct: 530 AIYLNLSCLEEAKPVIGSSL-AVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLL 588
Query: 543 ASGIIPLLIDLLRSSDK 559
++ ++ L L S ++
Sbjct: 589 SADLVNALQSLTISDEQ 605
>AT5G18320.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr5:6064431-6066186 REVERSE
Length = 458
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 151/297 (50%), Gaps = 24/297 (8%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P++F C +S IM +PV +++GQTY++ I +W K CPKT + L + +PN +
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK-HERTCPKTKQVLSHRLWIPNHLIS 131
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSR-DEKN 395
LI Q+C N K P AE L +R+ S ++
Sbjct: 132 DLITQWCLVNKYDHQK-------------PSDELVAELFTSDIEALLQRVSSSSSVADQI 178
Query: 396 KAAYEIRLLAKS----NIFNRCCLIDAGT-ILPLINLLSSRPDNS--IQENAIGALLKLS 448
+AA E+R K +F + D+ T +L ++ L D+S +QEN + AL LS
Sbjct: 179 EAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLS 238
Query: 449 KHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPA 508
+ K +I ++ + P++ +K + E ++ AAAT+ L++I ++ +IG + EA+ A
Sbjct: 239 ILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNS-EAVKA 297
Query: 509 LVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRS-SDKDELIA 564
L++LI++ K A + +F L + N KV+++G+I +++ S+ DEL++
Sbjct: 298 LIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLS 354
>AT3G54790.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr3:20281830-20284255 REVERSE
Length = 724
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 114/194 (58%), Gaps = 6/194 (3%)
Query: 382 LARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAI 441
L L GS K AA EIR L ++I NR + G I PL++LL S + QE+A+
Sbjct: 441 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSE-EKLTQEHAV 499
Query: 442 GALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGE 501
ALL LS K +I++ G ++P++ VL G + AK+ +AA++F L+ ++ +R+ IG+
Sbjct: 500 TALLNLSISELNKAMIVEVGAIEPLVHVLNTG-NDRAKENSAASLFSLSVLQVNRERIGQ 558
Query: 502 TPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKD- 560
+ AI ALV L+ GKK+A +A+F L + N +++ + + L++LL D D
Sbjct: 559 SNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL---DPDL 615
Query: 561 ELIADSLAVIAALA 574
E++ ++A++A L+
Sbjct: 616 EMVDKAVALLANLS 629
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P FRCP+S E+M DPV V++GQT+DR+SI+KW G +CP+T + L + EL+PN T++
Sbjct: 203 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVK 262
Query: 337 KLIQQFCNDNGISL 350
+I + N I+L
Sbjct: 263 AMIASWLEANRINL 276
>AT3G54790.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr3:20281830-20284363 REVERSE
Length = 760
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 114/194 (58%), Gaps = 6/194 (3%)
Query: 382 LARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAI 441
L L GS K AA EIR L ++I NR + G I PL++LL S + QE+A+
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSE-EKLTQEHAV 535
Query: 442 GALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGE 501
ALL LS K +I++ G ++P++ VL G + AK+ +AA++F L+ ++ +R+ IG+
Sbjct: 536 TALLNLSISELNKAMIVEVGAIEPLVHVLNTG-NDRAKENSAASLFSLSVLQVNRERIGQ 594
Query: 502 TPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKD- 560
+ AI ALV L+ GKK+A +A+F L + N +++ + + L++LL D D
Sbjct: 595 SNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL---DPDL 651
Query: 561 ELIADSLAVIAALA 574
E++ ++A++A L+
Sbjct: 652 EMVDKAVALLANLS 665
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P FRCP+S E+M DPV V++GQT+DR+SI+KW G +CP+T + L + EL+PN T++
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVK 298
Query: 337 KLIQQFCNDNGISLTKSGNRNRD 359
+I + N I+L + D
Sbjct: 299 AMIASWLEANRINLATNSCHQYD 321
>AT1G67530.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein |
chr1:25308229-25311081 FORWARD
Length = 782
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
PE+ RCPISL++M DPV +++GQTY+R IEKWF G+ CPKT ++L + L PN ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 337 KLIQQFCNDNGISLTKSGNRNRDI 360
LI +C NG + ++D+
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDL 356
>AT1G67530.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein |
chr1:25308229-25311081 FORWARD
Length = 782
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
PE+ RCPISL++M DPV +++GQTY+R IEKWF G+ CPKT ++L + L PN ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 337 KLIQQFCNDNGISLTKSGNRNRDI 360
LI +C NG + ++D+
Sbjct: 333 GLIASWCEQNGTQIPSGPPESQDL 356
>AT3G52450.1 | Symbols: PUB22 | PUB22 (PLANT U-BOX 22);
ubiquitin-protein ligase | chr3:19440943-19442250
REVERSE
Length = 435
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 136/314 (43%), Gaps = 51/314 (16%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNM-LCPKTGEKLKNTELVPNTTL 335
P F CPISL+IM DPV VSTG TYDR SIEKW +G CP T + + T+L PN TL
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 336 RKLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKN 395
R+LIQ +C N + I R P P ++ L + + S +
Sbjct: 68 RRLIQSWCTLNA---------SYGIERIPTPKPPICKSEIEKLIKESS-----SSHLNQV 113
Query: 396 KAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDN--------------------- 434
K +R + N N+ CL A L N++S+ D
Sbjct: 114 KCLKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNM 173
Query: 435 ---------SIQENAIGALLKL-SKHTNGKKLIIDSGG---LKPIIAVLIKGLSYEAKQI 481
S+ + A+ L L + T K L+ + G +K + ++ +G+ YE++
Sbjct: 174 LENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGI-YESRAY 232
Query: 482 AAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPG-NHQK 540
AA + L + ++I E +++++ D+ ++ + I + G N K
Sbjct: 233 AALLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHK 292
Query: 541 VLASGIIPLLIDLL 554
+ G I ++I+LL
Sbjct: 293 AVEGGTISMIIELL 306
>AT5G37490.1 | Symbols: | U-box domain-containing protein |
chr5:14887744-14889051 FORWARD
Length = 435
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P +F+CPIS+++M DPV +STG TYDR SIE W +GN CP T L + +PN T+R
Sbjct: 32 PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIR 91
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
K+IQ +C + G L I R P P + +SR L+ G ++
Sbjct: 92 KMIQGWCVEKGSPL---------IQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGV 142
Query: 397 AAYEIRLLAKSNIFNRCCL 415
+I+ L + NR C+
Sbjct: 143 IIEKIKKLGDESEKNRKCV 161
>AT5G58680.1 | Symbols: | armadillo/beta-catenin repeat family
protein | chr5:23708247-23709320 REVERSE
Length = 357
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
Query: 390 SRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSK 449
S +E+ +AA EIRLL+K+ NR L AG I PL++L+SS D +QE + A+L LS
Sbjct: 74 SIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSS-DLQLQEYGVTAVLNLSL 132
Query: 450 HTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPAL 509
K++I+ SG +KP++ L G + K+ AA + L+ ++ ++ IG + AIP L
Sbjct: 133 CDENKEMIVSSGAVKPLVNALRLG-TPTTKENAACALLRLSQVEENKITIGRSG-AIPLL 190
Query: 510 VELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKD 560
V L+++ KK+A A+++L N + + SGI+ L++L+ + D
Sbjct: 191 VNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESD 241
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | U-box domain-containing
protein | chr1:24637218-24638513 FORWARD
Length = 431
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F+CPIS E+M DPV +++G TYDR +IEKWF++G CP T L + E +PN T+R
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
++IQ +C G SL I R P P + + + L+ G +
Sbjct: 94 RMIQGWC---GSSL------GGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACME 144
Query: 397 AAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALL 445
++ L K + NR C+ + G L L ++ ENA +LL
Sbjct: 145 MVTKMTRLGKESERNRKCVKENGAGLVLCVCF-----DAFSENANASLL 188
>AT3G01400.1 | Symbols: | armadillo/beta-catenin repeat family
protein | chr3:151920-152987 FORWARD
Length = 355
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 392 DEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHT 451
DE+ +AA EIRLL+K+ NR + AG I PLI+L+SS D +QE + A+L LS
Sbjct: 78 DEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSS-DLQLQEYGVTAILNLSLCD 136
Query: 452 NGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVE 511
K+ I SG +KP++ L G + AK+ AA + L+ I+ ++ IG + AIP LV
Sbjct: 137 ENKESIASSGAIKPLVRALKMG-TPTAKENAACALLRLSQIEENKVAIGRSG-AIPLLVN 194
Query: 512 LIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLL 554
L++ KK+A A+++L N + + SGI+ L++L+
Sbjct: 195 LLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELM 237
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | U-box domain-containing
protein | chr5:25842119-25843381 REVERSE
Length = 420
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P FRCPISL++M PV++ TG TYDR+SI++W GN CP T + L+N + +PN TL+
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 337 KLIQQFCN 344
+LI+ + +
Sbjct: 71 RLIEIWSD 78
>AT5G09800.1 | Symbols: | U-box domain-containing protein |
chr5:3043123-3044352 REVERSE
Length = 409
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F+CPISL++M PV++STG TYDR SI++W GN CP T + L+N E VPN TL
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 337 KLIQQF 342
+LI +
Sbjct: 72 RLIDHW 77
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | PUB29 (PLANT U-BOX 29);
ubiquitin-protein ligase | chr3:6434234-6435481 REVERSE
Length = 415
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F+CPISL++M PV++ TG TYDR+SI++W GN CP T + LK + VPN TL+
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 337 KLIQQFCNDNG 347
+LI + + G
Sbjct: 73 RLINIWSDSIG 83
>AT1G68940.2 | Symbols: | armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein |
chr1:25921453-25925374 REVERSE
Length = 1035
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 143/337 (42%), Gaps = 69/337 (20%)
Query: 280 FRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA-GN---MLCPKTGEKLKNTELVPNTTL 335
F CP++ EIM DPVT TG T +R ++ +WF + GN + CP TG+KL TEL N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVL 308
Query: 336 RKLIQQFCNDN----------GISLTKSGNRNRDITRTIIPGSPA---------AAEAMK 376
+ +IQ++ N +SL S + D R + A ++
Sbjct: 309 KTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNKVQVREAGIIQ 368
Query: 377 FLSRYLARRL-------------------------------------VFGSRDEKNKAAY 399
L RYL R + GS + + A
Sbjct: 369 LLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLGSSHQPVRHAA 428
Query: 400 EIRLLAKSNIFNRCCLIDA--GTILPLINLLSSRP-DNSIQENAIGALLKLSKHTNGKKL 456
+ LL S + C I G IL L+ +R D+ E + L L K K
Sbjct: 429 QALLLELSKSQHACEKIGTARGAILMLVTAKYNRELDSFASETSDQILRNLEKCPENIKQ 488
Query: 457 IIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIK-GHRKLIGETPEAIPALVELIKD 515
+ +SG L+P++ L +G E Q+A A YL I GH K +A PAL+ L++
Sbjct: 489 MAESGLLEPLLGHLAEG--SEETQVAMAA--YLVEIDIGHEKKTYVAEKACPALIGLVQS 544
Query: 516 KPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLID 552
+ + ++ A A+ + L+ N++ ++ GII ++++
Sbjct: 545 ENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVE 581
>AT1G68940.1 | Symbols: | armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein |
chr1:25922001-25925374 REVERSE
Length = 1033
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 144/337 (42%), Gaps = 69/337 (20%)
Query: 280 FRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA-GN---MLCPKTGEKLKNTELVPNTTL 335
F CP++ EIM DPVT TG T +R ++ +WF + GN + CP TG+KL TEL N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVL 308
Query: 336 RKLIQQFCNDN----------GISLTKSGNRNRDITRTIIPGSPA---------AAEAMK 376
+ +IQ++ N +SL S + D R + A ++
Sbjct: 309 KTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNKVQVREAGIIQ 368
Query: 377 FLSRYLARR--------LVF-----------------------------GSRDEKNKAAY 399
L RYL R L F GS + + A
Sbjct: 369 LLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLGSSHQPVRHAA 428
Query: 400 EIRLLAKSNIFNRCCLIDA--GTILPLINLLSSRP-DNSIQENAIGALLKLSKHTNGKKL 456
+ LL S + C I G IL L+ +R D+ E + L L K K
Sbjct: 429 QALLLELSKSQHACEKIGTARGAILMLVTAKYNRELDSFASETSDQILRNLEKCPENIKQ 488
Query: 457 IIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIK-GHRKLIGETPEAIPALVELIKD 515
+ +SG L+P++ L +G E Q+A A YL I GH K +A PAL+ L++
Sbjct: 489 MAESGLLEPLLGHLAEG--SEETQVAMAA--YLVEIDIGHEKKTYVAEKACPALIGLVQS 544
Query: 516 KPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLID 552
+ + ++ A A+ + L+ N++ ++ GII ++++
Sbjct: 545 ENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVE 581
>AT1G68940.3 | Symbols: | armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein |
chr1:25921453-25925374 REVERSE
Length = 1090
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 144/337 (42%), Gaps = 69/337 (20%)
Query: 280 FRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA-GN---MLCPKTGEKLKNTELVPNTTL 335
F CP++ EIM DPVT TG T +R ++ +WF + GN + CP TG+KL TEL N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVL 308
Query: 336 RKLIQQFCNDN----------GISLTKSGNRNRDITRTIIPGSPA---------AAEAMK 376
+ +IQ++ N +SL S + D R + A ++
Sbjct: 309 KTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNKVQVREAGIIQ 368
Query: 377 FLSRYLARR--------LVF-----------------------------GSRDEKNKAAY 399
L RYL R L F GS + + A
Sbjct: 369 LLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLGSSHQPVRHAA 428
Query: 400 EIRLLAKSNIFNRCCLIDA--GTILPLINLLSSRP-DNSIQENAIGALLKLSKHTNGKKL 456
+ LL S + C I G IL L+ +R D+ E + L L K K
Sbjct: 429 QALLLELSKSQHACEKIGTARGAILMLVTAKYNRELDSFASETSDQILRNLEKCPENIKQ 488
Query: 457 IIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIK-GHRKLIGETPEAIPALVELIKD 515
+ +SG L+P++ L +G E Q+A A YL I GH K +A PAL+ L++
Sbjct: 489 MAESGLLEPLLGHLAEG--SEETQVAMAA--YLVEIDIGHEKKTYVAEKACPALIGLVQS 544
Query: 516 KPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLID 552
+ + ++ A A+ + L+ N++ ++ GII ++++
Sbjct: 545 ENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVE 581
>AT4G36550.1 | Symbols: | binding / ubiquitin-protein ligase |
chr4:17245400-17247926 REVERSE
Length = 718
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
PE F+C +S +M DPV +S+G T++R I+KWF GN CP + KL + L PN L+
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTI 364
I ++C NG+ + ++ + +I
Sbjct: 280 SQISEWCAKNGLDVQDPARKHVKASNSI 307
>AT5G18330.1 | Symbols: | U-box domain-containing protein |
chr5:6068474-6070042 REVERSE
Length = 445
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 147/302 (48%), Gaps = 23/302 (7%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P++F C +S +IM +P+ +++GQT+++S I +W K CP+T + L + ++PN +
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHERT-CPRTKQVLYHRFMIPNHLIN 124
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
++I+++C + K+ + D + G L L R S +++ +
Sbjct: 125 EVIKEWCLIHNFDRPKTSDEVID----LFTGD---------LESLLQRISSPSSVEDQTE 171
Query: 397 AAYEIRLLAKSNIFNRCCLIDAG----TILPLINLLSSRPDNSIQ--ENAIGALLKLSKH 450
AA E+ L AK F+ C+ +I L+ LS D++ + EN + AL S
Sbjct: 172 AAKELALKAKR--FSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTS 229
Query: 451 TNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALV 510
K L+ ++ + P++A +K + + +AAT+ L+ ++ +IG + E + AL+
Sbjct: 230 EKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNS-EVLKALI 288
Query: 511 ELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVI 570
+I++ + A +A+ L +K ++ G+I I +++ ++ LA +
Sbjct: 289 HVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFV 348
Query: 571 AA 572
+
Sbjct: 349 ST 350
>AT3G11840.1 | Symbols: PUB24 | PUB24 (PLANT U-BOX 24); binding /
ubiquitin-protein ligase | chr3:3736578-3738250 REVERSE
Length = 470
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 19/142 (13%)
Query: 241 LGLMSYCRGVIFEKLDNRITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQT 300
+ + +Y + +F ++D + I++ P F CPISLEIM DPVT +G T
Sbjct: 1 MNIYTYTKSYVFPQMDQE-EEEIEI-----------PNYFICPISLEIMKDPVTTVSGIT 48
Query: 301 YDRSSIEKWFKAGNMLCPKTGEKLK-NTELVPNTTLRKLIQQFCNDNGISLTKSGNRNRD 359
YDR +I KW + CP T + L +++L PN LR+LIQ +C +N ++ R
Sbjct: 49 YDRQNIVKWLEKVPS-CPVTKQPLPLDSDLTPNHMLRRLIQHWCVEN-----ETRGVVRI 102
Query: 360 ITRTIIPGSPAAAEAMKFLSRY 381
T + PG E +K L ++
Sbjct: 103 STPRVPPGKLNVVEEIKNLKKF 124
>AT1G01680.1 | Symbols: | U-box domain-containing protein |
chr1:246411-248329 REVERSE
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 278 EDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLRK 337
EDF+CPIS+EIM DP + G TY+ KW ++G PKT + L+N LVPN TLR
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 338 LIQQFCNDN 346
+I+ + N
Sbjct: 295 IIKDWLEKN 303
>AT5G18340.1 | Symbols: | U-box domain-containing protein |
chr5:6070640-6072198 REVERSE
Length = 456
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 137/285 (48%), Gaps = 21/285 (7%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P++F+C +S IM DPV + +GQTY++ I +W ++ CP + L L PN +
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPNHLIN 133
Query: 337 KLIQQFCNDNGISLTKSGNRNRD-ITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKN 395
+LI ++C N + D +T G + + + S +A ++
Sbjct: 134 ELITRWCLANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVA---------DQT 184
Query: 396 KAAYEIRLLAKSNIFNRCCLI----DAGT-ILPLINLLSSRPDNS--IQENAIGALLKLS 448
+AA E+ L + + R I D+ T +L +++L D++ +QEN + AL +S
Sbjct: 185 EAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFNMS 244
Query: 449 KHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPA 508
K ++ ++ + P++A +K S ++ A T+ L+ I ++ +IG + A+ A
Sbjct: 245 TFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSV-ALKA 303
Query: 509 LVELIKD-KPTNGKKNAVAAIFALLLHP-GNHQKVLASGIIPLLI 551
L++LI + + +A+ A+ L N +K ++ G+ P I
Sbjct: 304 LIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAI 348
>AT4G16490.1 | Symbols: | binding | chr4:9293891-9295530 REVERSE
Length = 472
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 4/181 (2%)
Query: 394 KNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNG 453
K AA ++RLLAK+ NR + ++G I LI LL D QE+A+ ALL LS H
Sbjct: 200 KRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCN-DPWTQEHAVTALLNLSLHDQN 258
Query: 454 KKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELI 513
K +I G +K ++ VL G + +KQ AA + LA ++ ++ IG AIP LV L+
Sbjct: 259 KAVIAAGGAIKSLVWVLKTG-TETSKQNAACALLSLALLEENKGSIGACG-AIPPLVSLL 316
Query: 514 KDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVIAAL 573
+ GKK+A+ ++ L N ++ + +G + L+DL+ + + + ++ V+++L
Sbjct: 317 LNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLV-AEEGTGMAEKAMVVLSSL 375
Query: 574 A 574
A
Sbjct: 376 A 376
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD
Length = 400
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P+ F CPISLE+M DP + G TY+ +I W + G+ P T KL +T+LVPN LR
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 337 KLIQQFCN 344
IQ++ +
Sbjct: 386 SAIQEWLH 393
>AT1G76390.2 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:28655914-28658531 FORWARD
Length = 811
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 141/308 (45%), Gaps = 35/308 (11%)
Query: 278 EDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA----GNML-CPKTGEKLKNTELVPN 332
E F CP++ ++M +PVT+ GQT++R +IEKWF+ G L CP T ++L T+L P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 333 TTLRKLIQQF-CNDNGISLTKS------GNRN----------RDITRTIIPGSPAAAEAM 375
LR I+++ ++ + L + GN R+I R I
Sbjct: 87 IALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQ 146
Query: 376 KFLSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNS 435
L R + L S + + KA ++++ + + ++ + + T+ ++ LS P
Sbjct: 147 --LVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKG 204
Query: 436 IQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQI-----AAATIFYLA 490
+E A+ L +LSK + L G + I +L+ S +++ + A T+ L
Sbjct: 205 -REAAVSVLFELSK---SEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLE 260
Query: 491 SIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLL 550
+ + + + P L +L++ P K ++A +L + + ++A + L
Sbjct: 261 RSEENVRQMAINGRLQPLLAKLLEGSPET--KVSMAFYLGVLALNNDVKVIVAQTVGSSL 318
Query: 551 IDLLRSSD 558
IDL+R+ D
Sbjct: 319 IDLMRTRD 326
>AT1G76390.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr1:28655914-28658531 FORWARD
Length = 811
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 141/308 (45%), Gaps = 35/308 (11%)
Query: 278 EDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKA----GNML-CPKTGEKLKNTELVPN 332
E F CP++ ++M +PVT+ GQT++R +IEKWF+ G L CP T ++L T+L P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 333 TTLRKLIQQF-CNDNGISLTKS------GNRN----------RDITRTIIPGSPAAAEAM 375
LR I+++ ++ + L + GN R+I R I
Sbjct: 87 IALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQ 146
Query: 376 KFLSRYLARRLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNS 435
L R + L S + + KA ++++ + + ++ + + T+ ++ LS P
Sbjct: 147 --LVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEPSKG 204
Query: 436 IQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQI-----AAATIFYLA 490
+E A+ L +LSK + L G + I +L+ S +++ + A T+ L
Sbjct: 205 -REAAVSVLFELSK---SEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLE 260
Query: 491 SIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLL 550
+ + + + P L +L++ P K ++A +L + + ++A + L
Sbjct: 261 RSEENVRQMAINGRLQPLLAKLLEGSPET--KVSMAFYLGVLALNNDVKVIVAQTVGSSL 318
Query: 551 IDLLRSSD 558
IDL+R+ D
Sbjct: 319 IDLMRTRD 326
>AT5G57035.1 | Symbols: | ATP binding / kinase/ protein kinase/
protein serine/threonine kinase/ ubiquitin-protein
ligase | chr5:23080743-23083819 FORWARD
Length = 789
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%)
Query: 258 RITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLC 317
RI + + + TE + P + CPI EIM DP + G TY+R +I++W + +
Sbjct: 690 RILESANSRLKTEQANARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVS 749
Query: 318 PKTGEKLKNTELVPNTTLRKLIQQFCNDNGISLTKS 353
P T +LK+++L PN TLR I+++ + + + L+ +
Sbjct: 750 PVTKHRLKHSDLTPNHTLRSAIREWRSRSRLDLSTT 785
>AT1G08315.1 | Symbols: | armadillo/beta-catenin repeat family
protein | chr1:2620500-2621477 REVERSE
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 385 RLVFGSRDEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGAL 444
RL S + A E+RL++K + +R + DAG I L L S +S QENA L
Sbjct: 15 RLSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYSSSHSS-QENAAATL 73
Query: 445 LKLSKHTNGKKLIIDSGGLKPIIAVLIK----GLSYEAKQIAAATIF-YLASIKGHRKLI 499
L LS ++ ++ S GL ++ ++ S A Q +AATI+ L + + +R +I
Sbjct: 74 LNLS--ITSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAEESYRPII 131
Query: 500 GETPEAIPALVELIK--DKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSS 557
G + I +L+ +I+ D K+++ A+FA+ L+P N +++ G IP L L+
Sbjct: 132 GSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALFSLIVKD 191
Query: 558 DKDELIADSLAVIAALA 574
+ ++ D+ AV+A +A
Sbjct: 192 SRCGIVEDATAVMAQVA 208
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | SAUL1
(SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1);
ubiquitin-protein ligase | chr1:7217812-7220609 FORWARD
Length = 801
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 147/337 (43%), Gaps = 66/337 (19%)
Query: 278 EDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFK----AGN-MLCPKTGEKLKNTELVPN 332
E F CP++ E+M DPVT+ G+T++R +IEKWFK +G CP T ++L +T++ +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 333 TTLRKLIQQFCNDNG---------------------------------ISLTKSGNRNRD 359
LR I+++ + N I + G RN
Sbjct: 85 IALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQ 144
Query: 360 ITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNKAAY--EIRLLAK----------- 406
+ II + + +++ + + +V G + K A +R L K
Sbjct: 145 LIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEPSKGRE 204
Query: 407 ---SNIFN------RCCLIDA--GTILPLINLLSSRPDN-SIQENAIGALLKLSKHTNGK 454
S +F C I + G ++ L+ L SS +N SI E A L + +
Sbjct: 205 AAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSEEIV 264
Query: 455 KLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIK 514
+ + G L+P++ L++G S E K A+ + L + L+ +T + +LV+L++
Sbjct: 265 RQMASYGRLQPLLGKLLEG-SPETKLSMASFLGELPLNNDVKVLVAQTVGS--SLVDLMR 321
Query: 515 DKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLI 551
++ A+ A+ + G+ + +++ GI+P LI
Sbjct: 322 SGDMPQREAALKALNKISSFEGSAKVLISKGILPPLI 358
>AT3G61390.2 | Symbols: | U-box domain-containing protein |
chr3:22716418-22718270 FORWARD
Length = 435
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P+ F CPI+ +IM DP + G TY+ +I +WF+ G+ P ++L +T LVPN LR
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 337 KLIQQF 342
IQ++
Sbjct: 414 SAIQEW 419
>AT1G01660.1 | Symbols: | U-box domain-containing protein |
chr1:240057-242608 REVERSE
Length = 568
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F CPIS E+M +P + G TY+ S+ +W G+ P T KL + LVPN LR
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 337 KLIQQFCNDNG 347
IQ++ N
Sbjct: 558 SAIQEWLQRNS 568
>AT1G56040.1 | Symbols: | binding / protein binding /
ubiquitin-protein ligase | chr1:20960356-20962334
REVERSE
Length = 485
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F CPI+ E+M DP + G TY+ SI KW G+ P T +L + LVPN LR
Sbjct: 419 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 478
Query: 337 KLIQQFC 343
I++
Sbjct: 479 SAIEELV 485
>AT3G07360.3 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9) |
chr3:2355636-2356613 FORWARD
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 338 LIQQFCNDNGISLTKSG------NRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSR 391
+I ++C NG+ TKS N + +TR+ + + L + +
Sbjct: 1 MISKWCKKNGLE-TKSQYHPNLVNEDETVTRS----------DREIFNSLLCKVSSSNLQ 49
Query: 392 DEKNKAAYEIRLLAKSNIFNRCCLIDA-GTILPLIN--LLSSRPDNSIQENAIGALLKLS 448
D+K+ AA E+RLL + R ++ I L+N L S PD +QE+ + LL +S
Sbjct: 50 DQKS-AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNIS 108
Query: 449 KHTN-GKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIP 507
H + KKL+ ++ + P++ ++ + + AAA IF L+++ ++ LIG++ P
Sbjct: 109 IHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKP 168
Query: 508 ALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLL 550
L++L+++ K+ AAIF L + N + + G + +L
Sbjct: 169 -LIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVL 210
>AT3G07360.2 | Symbols: PUB9, ATPUB9 | PUB9 (PLANT U-BOX 9) |
chr3:2355636-2356613 FORWARD
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 338 LIQQFCNDNGISLTKSG------NRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSR 391
+I ++C NG+ TKS N + +TR+ + + L + +
Sbjct: 1 MISKWCKKNGLE-TKSQYHPNLVNEDETVTRS----------DREIFNSLLCKVSSSNLQ 49
Query: 392 DEKNKAAYEIRLLAKSNIFNRCCLIDA-GTILPLIN--LLSSRPDNSIQENAIGALLKLS 448
D+K+ AA E+RLL + R ++ I L+N L S PD +QE+ + LL +S
Sbjct: 50 DQKS-AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNIS 108
Query: 449 KHTN-GKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIP 507
H + KKL+ ++ + P++ ++ + + AAA IF L+++ ++ LIG++ P
Sbjct: 109 IHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKP 168
Query: 508 ALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLL 550
L++L+++ K+ AAIF L + N + + G + +L
Sbjct: 169 -LIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVL 210
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | U-box domain-containing
protein | chr1:24637218-24638513 FORWARD
Length = 415
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 70/169 (41%), Gaps = 30/169 (17%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F+CPIS E+M DP WF++G CP T L + E +PN T+R
Sbjct: 34 PSQFQCPISYELMKDP----------------WFESGYQTCPVTNTVLTSLEQIPNHTIR 77
Query: 337 KLIQQFCNDNGISLTKSGNRNRDITRTIIPGSPAAAEAMKFLSRYLARRLVFGSRDEKNK 396
++IQ +C G SL I R P P + + + L+ G +
Sbjct: 78 RMIQGWC---GSSL------GGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACME 128
Query: 397 AAYEIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALL 445
++ L K + NR C+ + G L L ++ ENA +LL
Sbjct: 129 MVTKMTRLGKESERNRKCVKENGAGLVLCVCF-----DAFSENANASLL 172
>AT5G62560.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr5:25110073-25111752 FORWARD
Length = 559
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 424 LINLLSSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAA 483
L +LL SR N +Q NA +++ LS K I+ SG + +I VL G + EA++ A
Sbjct: 281 LRSLLVSR-YNLVQTNAAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSG-TTEAQEHVA 338
Query: 484 ATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLA 543
+F LA ++ +IG P L L + +++A A++ L L P N +++
Sbjct: 339 GALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVR 398
Query: 544 SGIIPLLIDLLRSSDKDELIADSLAVIAA 572
+G +P L+ ++RS D I L +AA
Sbjct: 399 AGAVPTLLSMVRSGDSTSRILLVLCNLAA 427
>AT2G44900.1 | Symbols: | armadillo/beta-catenin repeat family
protein / F-box family protein | chr2:18511719-18515762
REVERSE
Length = 930
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 407 SNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPI 466
SN N +AG + L+ L S P +++ A GAL LS ++ I +GG++ +
Sbjct: 598 SNNNNAAVGQEAGALEALVQLTKS-PHEGVRQEAAGALWNLSFDDKNRESISVAGGVEAL 656
Query: 467 IAVL--IKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNGKKNA 524
+A+ S ++ AA ++ L+ + + IG +P L+ L + + + + A
Sbjct: 657 VALAQSCSNASTGLQERAAGALWGLSVSEANSVAIGREG-GVPPLIALARSEAEDVHETA 715
Query: 525 VAAIFALLLHPGNHQKVLASGIIPLLIDLLRSS 557
A++ L +PGN +++ G +P L+ L SS
Sbjct: 716 AGALWNLAFNPGNALRIVEEGGVPALVHLCSSS 748
>AT3G49060.1 | Symbols: | protein kinase family protein / U-box
domain-containing protein | chr3:18187386-18191878
REVERSE
Length = 805
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P + CPI E+M DP+ + G TY+ +I +W G+ P T K+++ L+PN L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 337 KLIQQFCN 344
IQ + N
Sbjct: 796 LAIQDWQN 803
>AT5G51270.1 | Symbols: | protein kinase family protein |
chr5:20835137-20838262 REVERSE
Length = 819
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F CP+ ++M +P + G TYDR +IE+W + + P T L+N L+PN TL
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 337 KLIQQFCNDN 346
I ++ N N
Sbjct: 809 AAIVEWRNRN 818
>AT5G65500.1 | Symbols: | ATP binding / kinase/ protein kinase/
protein serine/threonine kinase/ protein tyrosine
kinase/ ubiquitin-protein ligase |
chr5:26181093-26183997 REVERSE
Length = 791
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 277 PEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTTLR 336
P F CPI E+M +P + G +Y+ +I++W G+ P T +L L PN TLR
Sbjct: 716 PSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTLR 775
Query: 337 KLIQQF 342
LIQ +
Sbjct: 776 SLIQDW 781
>AT1G01670.1 | Symbols: | U-box domain-containing protein |
chr1:242943-245163 REVERSE
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 271 TLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELV 330
++S P+ F CPIS +IM +P + G TY+ +W G P T +L+N L+
Sbjct: 289 SVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLI 348
Query: 331 PNTTLRKLIQQF 342
PN LR I+ +
Sbjct: 349 PNLVLRSAIKDW 360
>AT3G47820.1 | Symbols: | armadillo/beta-catenin repeat family
protein / U-box domain-containing protein |
chr3:17644434-17645963 FORWARD
Length = 509
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 400 EIRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKLIID 459
++R +SN R L + L +L+ SR N +Q NA +++ LS K I+
Sbjct: 206 QLRKTTRSNETTRISLCTDRILSLLRSLIVSR-YNIVQTNAAASIVNLSLEKPNKLKIVR 264
Query: 460 SGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTN 519
SG + +I VL G S EA++ +F LA + ++ +IG P L L +
Sbjct: 265 SGFVPLLIDVLKSG-STEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESER 323
Query: 520 GKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSD 558
+++A A++ L L P N +++ +G +P+++ ++RS +
Sbjct: 324 ARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGE 362
>AT4G25160.1 | Symbols: | protein kinase family protein |
chr4:12903360-12906669 REVERSE
Length = 835
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 272 LSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVP 331
+S P F CP+ ++M +P + G TYDR +IE+W K N P T L + L+P
Sbjct: 762 VSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNT-SPMTDSPLHSKNLLP 820
Query: 332 NTTLRKLIQQF 342
N TL I ++
Sbjct: 821 NYTLYTAIMEW 831
>AT2G45910.1 | Symbols: | protein kinase family protein / U-box
domain-containing protein | chr2:18894520-18898212
FORWARD
Length = 834
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 275 LNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLCPKTGEKLKNTELVPNTT 334
+ P F CPI E+M DP + G TY+ +I W + + P T KL +T L+ N
Sbjct: 762 IAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHA 821
Query: 335 LRKLIQQF 342
LR IQ++
Sbjct: 822 LRSAIQEW 829
>AT2G19410.1 | Symbols: | protein kinase family protein |
chr2:8404901-8409012 REVERSE
Length = 801
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 258 RITDHIDMKCNTETLSCLNPEDFRCPISLEIMTDPVTVSTGQTYDRSSIEKWFKAGNMLC 317
R+ + + K E + P + CPI EIM +P + G TY+R +I W + N +
Sbjct: 707 RLVETANSKVKKEGSNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHN-IS 765
Query: 318 PKTGEKLKNTELVPNTTLRKLIQQF 342
P T +KL + +L PN TLR I+ +
Sbjct: 766 PVTRQKLDHFKLTPNHTLRSAIRDW 790
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | PUB38 (PLANT U-BOX 38);
ubiquitin-protein ligase | chr5:26048173-26049843
REVERSE
Length = 556
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 401 IRLLAKSNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKLIIDS 460
+R + ++N R L + L N++ SR + +Q NA+ +L+ LS K L I
Sbjct: 248 MRKMTRTNDEARVSLCSPRILSLLKNMIVSR-YSLVQTNALASLVNLSLDKKNK-LTIVR 305
Query: 461 GGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNG 520
G PI+ ++K S EA++ AA TIF L+ ++ IG P L L +
Sbjct: 306 LGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRT 365
Query: 521 KKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSSDKDELIADSLAVIAALA 574
+ ++ A++ L L+ N K++ G +P L ++RS E + +L VI LA
Sbjct: 366 RHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSG---ESASRALLVICNLA 416
>AT3G60350.1 | Symbols: | armadillo/beta-catenin repeat family
protein / F-box family protein | chr3:22306806-22310596
REVERSE
Length = 928
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 407 SNIFNRCCLIDAGTILPLINLLSSRPDNSIQENAIGALLKLSKHTNGKKLIIDSGGLKPI 466
SN N +AG + L+ L S P +++ A GAL L+ ++ I GG++ +
Sbjct: 589 SNGNNAAVGQEAGALEALVQLTQS-PHEGVKQEAAGALWNLAFDDKNRESIAAFGGVEAL 647
Query: 467 IAVLIKGLSYEA---KQIAAATIFYLASIKGHRKLIGETPEAIPALVELIKDKPTNGKKN 523
+A L K S + ++ A ++ L+ + + IG IP L+ L++ + + +
Sbjct: 648 VA-LAKSSSNASTGLQERVAGALWGLSVSEANSIAIGHEG-GIPPLIALVRSEAEDVHET 705
Query: 524 AVAAIFALLLHPGNHQKVLASGIIPLLIDLLRSS 557
A A++ L +PGN +++ G + L+ L SS
Sbjct: 706 AAGALWNLSFNPGNALRIVEEGGVVALVQLCSSS 739
>AT3G03440.1 | Symbols: | armadillo/beta-catenin repeat family
protein | chr3:815709-818568 FORWARD
Length = 408
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Query: 392 DEKNKAAYEIRLLAKSNIFNRCCLIDAGTILPLINLLS-SRPDNSIQENAIGALLKLSKH 450
D + AA EIR L K++ +RC + + PL+++L P++ + + L K
Sbjct: 79 DSRLFAAKEIRRLTKTS--HRCRRHFSQAVEPLVSMLRFDSPESHHEAALLALLNLAVKD 136
Query: 451 TNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRKLIGETPEAIPALV 510
K II++G L+PII L + S ++ A+A++ L++ ++ +IG +P LV
Sbjct: 137 EKNKVSIIEAGALEPIINFL-QSNSPTLQEYASASLLTLSASANNKPIIGANG-VVPLLV 194
Query: 511 ELIKDKPTNGKKNAVAAIFALLLHPGNHQKVLASGIIPLLIDLL 554
++IK K +AV A+ L P N +LA+ + +++LL
Sbjct: 195 KVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLL 238
>AT4G12710.1 | Symbols: | armadillo/beta-catenin repeat family
protein | chr4:7485040-7486733 REVERSE
Length = 402
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 381 YLARRLVFGSRDEKNKAAYEIR-LLAKSNIFN--RCCLIDAGTILPLINLLSSRPDNSIQ 437
+L+++L+ G D + +AA EIR LL KS + + R L DAG I PL+ +L S ++
Sbjct: 49 HLSKKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSNVDARH 108
Query: 438 ENAIGALLKLSKHTNGKKLIIDSGGLKPIIAVLIKGLSYEAKQIAAATIFYLASIKGHRK 497
+ + L ++ K I+ +G + P+I +L K + +++A A I L++ ++
Sbjct: 109 ASLLALLNLAVRNERNKIEIVKAGAVPPLIQIL-KLHNASLRELATAAILTLSAAPANKA 167
Query: 498 LIGETPEAIPALVELIKDKPTNGKKNAVAAIFAL 531
+I + P L++++ GK +AV A+ L
Sbjct: 168 MIISS-GVPPLLIQMLSSGTVQGKVDAVTALHNL 200