Jatropha Genome Database
- JcCB0058851.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0058851.10 + phase: 0 /pseudo/partial
(268 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 240 7e-64
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 239 1e-63
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 239 1e-63
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 237 5e-63
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 236 8e-63
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 228 4e-60
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 195 3e-50
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 189 1e-48
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 187 6e-48
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 180 7e-46
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 173 1e-43
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 168 4e-42
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 153 1e-37
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 144 6e-35
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 130 1e-30
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 129 1e-30
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 129 3e-30
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 129 3e-30
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 128 3e-30
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 127 7e-30
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 126 1e-29
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 126 2e-29
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 125 2e-29
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 125 2e-29
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 123 1e-28
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 114 5e-26
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 112 2e-25
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 110 7e-25
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 100 7e-22
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 90 1e-18
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 84 1e-16
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 83 2e-16
AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUC... 65 6e-11
AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID INDUC... 63 2e-10
AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID INDUC... 62 5e-10
AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 59 4e-09
AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 55 6e-08
AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6); tr... 55 6e-08
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPON... 54 1e-07
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 52 3e-07
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 52 4e-07
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 52 4e-07
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 52 5e-07
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 52 5e-07
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 51 7e-07
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 51 7e-07
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 51 7e-07
AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE FACTO... 50 1e-06
AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID INDUC... 49 3e-06
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 240 bits (612), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 113/147 (76%), Positives = 131/147 (89%), Gaps = 1/147 (0%)
Query: 121 KAQVVGWPPIRSFRKNSLAT-TSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
KAQVVGWPPIRS+RKN++A+ TSKNT+EVDGK G LFVKVSMDGAPYLRKVDLR Y++
Sbjct: 163 KAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTS 222
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
YQ+LSSALEKMFSCFT+GQ G HG GRE +SE KLKDLLHGSE+VLTYEDKDGDWMLVG
Sbjct: 223 YQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVG 282
Query: 240 DVPWEMFMSSCKRLRIMKGSEARGLGC 266
DVPWE+F +C++L+IMKGS++ GLG
Sbjct: 283 DVPWEIFTETCQKLKIMKGSDSIGLGA 309
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/149 (75%), Positives = 131/149 (87%), Gaps = 1/149 (0%)
Query: 121 KAQVVGWPPIRSFRKNSLAT-TSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
KAQVVGWPPIRS+RKN++A+ TSKNT+EVDGK G LFVKVSMDGAPYLRKVDLR Y++
Sbjct: 163 KAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTS 222
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
YQ+LSSALEKMFSCFT+GQ G HG GRE +SE KLKDLLHGSE+VLTYEDKDGDWMLVG
Sbjct: 223 YQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVG 282
Query: 240 DVPWEMFMSSCKRLRIMKGSEARGLGCGV 268
DVPWE+F +C++L+IMKGS++ GL G
Sbjct: 283 DVPWEIFTETCQKLKIMKGSDSIGLAPGA 311
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/149 (75%), Positives = 131/149 (87%), Gaps = 1/149 (0%)
Query: 121 KAQVVGWPPIRSFRKNSLAT-TSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
KAQVVGWPPIRS+RKN++A+ TSKNT+EVDGK G LFVKVSMDGAPYLRKVDLR Y++
Sbjct: 163 KAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTS 222
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
YQ+LSSALEKMFSCFT+GQ G HG GRE +SE KLKDLLHGSE+VLTYEDKDGDWMLVG
Sbjct: 223 YQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVG 282
Query: 240 DVPWEMFMSSCKRLRIMKGSEARGLGCGV 268
DVPWE+F +C++L+IMKGS++ GL G
Sbjct: 283 DVPWEIFTETCQKLKIMKGSDSIGLAPGA 311
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 237 bits (605), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 107/147 (72%), Positives = 128/147 (87%)
Query: 121 KAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAY 180
KAQ+VGWPP+RS+RKN+LATT KN++EVDG+ G LFVKVSMDGAPYLRKVDLR+Y+ Y
Sbjct: 181 KAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNY 240
Query: 181 QELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGD 240
ELSSALEKMF+ FT+GQ GS+G G++MLSE+KLKDLL+G +YVLTYEDKDGDWMLVGD
Sbjct: 241 GELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGD 300
Query: 241 VPWEMFMSSCKRLRIMKGSEARGLGCG 267
VPWEMF+ CK+L+IMKG +A GL
Sbjct: 301 VPWEMFIDVCKKLKIMKGCDAIGLAAA 327
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 236 bits (603), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 107/145 (73%), Positives = 128/145 (88%)
Query: 121 KAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAY 180
KAQ+VGWPP+RS+RKN+LATT KN++EVDG+ G LFVKVSMDGAPYLRKVDLR+Y+ Y
Sbjct: 181 KAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNY 240
Query: 181 QELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGD 240
ELSSALEKMF+ FT+GQ GS+G G++MLSE+KLKDLL+G +YVLTYEDKDGDWMLVGD
Sbjct: 241 GELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGD 300
Query: 241 VPWEMFMSSCKRLRIMKGSEARGLG 265
VPWEMF+ CK+L+IMKG +A GL
Sbjct: 301 VPWEMFIDVCKKLKIMKGCDAIGLA 325
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 228 bits (580), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 127/155 (81%), Gaps = 9/155 (5%)
Query: 120 TKAQVVGWPPIRSFRKNSLATT-------SKNTEEVDGKGGPSG--LFVKVSMDGAPYLR 170
+KAQVVGWPPIRSFRKNS+A++ + TEE + K GP L+VKVSM+GAPYLR
Sbjct: 140 SKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLR 199
Query: 171 KVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYED 230
K+DL+ Y +Y ELSSALEKMFSCFTIGQ+GSHGG GR+ L+ES+L DLL GSEYV+TYED
Sbjct: 200 KIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYED 259
Query: 231 KDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLG 265
KD DWMLVGDVPWEMF+ SCK+LRIMK SEA GL
Sbjct: 260 KDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLA 294
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 115/147 (78%), Gaps = 3/147 (2%)
Query: 120 TKAQVVGWPPIRSFRKNSLATT-SKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYS 178
KAQVVGWPP+R++RKN +A S EE GG + FVKVSMDGAPYLRKVDL+ Y+
Sbjct: 73 AKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYT 132
Query: 179 AYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLV 238
+Y++LS AL KMFS FT+G YG+ G + + ++ESK+ DLL+ SEYV +YEDKDGDWMLV
Sbjct: 133 SYKDLSDALAKMFSSFTMGSYGAQGMI--DFMNESKVMDLLNSSEYVPSYEDKDGDWMLV 190
Query: 239 GDVPWEMFMSSCKRLRIMKGSEARGLG 265
GDVPW MF+ SCKRLRIMKGSEA GL
Sbjct: 191 GDVPWPMFVESCKRLRIMKGSEAIGLA 217
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 116/161 (72%), Gaps = 17/161 (10%)
Query: 120 TKAQVVGWPPIRSFRKNSLA----TTSKNTEEVDGKGG-----------PSGLFVKVSMD 164
KAQVVGWPP+RSFRKN ++ TT TE D G + +VKVSMD
Sbjct: 67 AKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMD 126
Query: 165 GAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEY 224
GAPYLRK+DL+ Y YQ+LS+AL KMFS FTIG YG G ++ ++ESKL DLL+GS+Y
Sbjct: 127 GAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDY 184
Query: 225 VLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLG 265
V TYEDKDGDWMLVGDVPWEMF+ SCKR+RIMKGSEA GL
Sbjct: 185 VPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLA 225
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 187 bits (475), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 113/155 (72%), Gaps = 11/155 (7%)
Query: 120 TKAQVVGWPPIRSFRKNSLAT--TSKNTEEVDGK-------GGPSGLFVKVSMDGAPYLR 170
KAQVVGWPP+R++RKN + TS EE + G VKVSMDGAPYLR
Sbjct: 79 AKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLR 138
Query: 171 KVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYED 230
KVDL+ Y +YQ+LS AL KMFS FT+G YG+ G + + ++ESKL +LL+ SEYV +YED
Sbjct: 139 KVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYED 196
Query: 231 KDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLG 265
KDGDWMLVGDVPWEMF+ SCKRLRIMKGSEA GL
Sbjct: 197 KDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLA 231
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 180 bits (457), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 112/147 (76%), Gaps = 8/147 (5%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGP-SGLFVKVSMDGAPYLRKVDLRNYS 178
KAQVVGWPP+RS+RKN + + K++ GGP + FVKVSMDGAPYLRK+DLR Y
Sbjct: 79 AKAQVVGWPPVRSYRKNVMVSCQKSS------GGPEAAAFVKVSMDGAPYLRKIDLRMYK 132
Query: 179 AYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLV 238
+Y ELS+AL MFS FT+G++G G+ + ++E KL DL++ +YV +YEDKDGDWMLV
Sbjct: 133 SYDELSNALSNMFSSFTMGKHGGEEGM-IDFMNERKLMDLVNSWDYVPSYEDKDGDWMLV 191
Query: 239 GDVPWEMFMSSCKRLRIMKGSEARGLG 265
GDVPW MF+ +CKRLR+MKGS+A GL
Sbjct: 192 GDVPWPMFVDTCKRLRLMKGSDAIGLA 218
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 106/148 (71%), Gaps = 20/148 (13%)
Query: 121 KAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAY 180
KAQ+VGWPP+RS+RKN++ + KN E +G+G ++VKVSMDGAPYLRK+DL Y Y
Sbjct: 62 KAQIVGWPPVRSYRKNNIQS-KKNESEHEGQG----IYVKVSMDGAPYLRKIDLSCYKGY 116
Query: 181 QELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGD 240
EL ALE MF F++G+Y G GS++V TYEDKDGDWML+GD
Sbjct: 117 SELLKALEVMFK-FSVGEYFERDGY--------------KGSDFVPTYEDKDGDWMLIGD 161
Query: 241 VPWEMFMSSCKRLRIMKGSEARGLGCGV 268
VPWEMF+ +CKRLRIMKGSEA+GLGCGV
Sbjct: 162 VPWEMFICTCKRLRIMKGSEAKGLGCGV 189
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 102/147 (69%), Gaps = 22/147 (14%)
Query: 121 KAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAY 180
KAQ+VGWPP+RS+RKN++ T +E G+G +VKVSMDGAPYLRK+DL Y Y
Sbjct: 60 KAQIVGWPPVRSYRKNNVQTKKSESE---GQGN----YVKVSMDGAPYLRKIDLTMYKQY 112
Query: 181 QELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGD 240
EL +LE MF F++G+Y G GS++V TYEDKDGDWMLVGD
Sbjct: 113 PELMKSLENMFK-FSVGEYFEREGY--------------KGSDFVPTYEDKDGDWMLVGD 157
Query: 241 VPWEMFMSSCKRLRIMKGSEARGLGCG 267
VPWEMF+SSCKRLRIMKGSE +GLGCG
Sbjct: 158 VPWEMFVSSCKRLRIMKGSEVKGLGCG 184
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (70%), Gaps = 11/134 (8%)
Query: 120 TKAQVVGWPPIRSFRKNSLAT--TSKNTEEVDGK-------GGPSGLFVKVSMDGAPYLR 170
KAQVVGWPP+R++RKN + TS EE + G VKVSMDGAPYLR
Sbjct: 79 AKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLR 138
Query: 171 KVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYED 230
KVDL+ Y +YQ+LS AL KMFS FT+G YG+ G + + ++ESKL +LL+ SEYV +YED
Sbjct: 139 KVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMI--DFMNESKLMNLLNSSEYVPSYED 196
Query: 231 KDGDWMLVGDVPWE 244
KDGDWMLVGDVPWE
Sbjct: 197 KDGDWMLVGDVPWE 210
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 89/145 (61%), Gaps = 31/145 (21%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
TK Q+VGWPP+RS RKN+ + + +VKVSMDGAPYLRK+DL+ Y
Sbjct: 57 TKTQIVGWPPVRSSRKNNNSVS----------------YVKVSMDGAPYLRKIDLKTYKN 100
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
Y EL ALE MF IG+Y G GS +V TYEDKDGDWMLVG
Sbjct: 101 YPELLKALENMFKVM-IGEYCEREGY--------------KGSGFVPTYEDKDGDWMLVG 145
Query: 240 DVPWEMFMSSCKRLRIMKGSEARGL 264
DVPW+MF SSCKRLRIMKGS+A L
Sbjct: 146 DVPWDMFSSSCKRLRIMKGSDAPAL 170
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 85/144 (59%), Gaps = 32/144 (22%)
Query: 121 KAQVVGWPPIRSFR-KNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
K+QVVGWPP+ S+R KNSL T + +VKVS+DGA +LRK+DL Y
Sbjct: 51 KSQVVGWPPVCSYRRKNSLERTKSS-------------YVKVSVDGAAFLRKIDLEMYKC 97
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
YQ+L+SAL+ +F C+ D L SE V YEDKDGDWML G
Sbjct: 98 YQDLASALQILFGCYI------------------NFDDTLKESECVPIYEDKDGDWMLAG 139
Query: 240 DVPWEMFMSSCKRLRIMKGSEARG 263
DVPWEMF+ SCKRLRIMK S RG
Sbjct: 140 DVPWEMFLGSCKRLRIMKRSCNRG 163
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 87/142 (61%), Gaps = 29/142 (20%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
K Q+VGWPP+RS RKN+ +VKVSMDGAPYLRK+DL+ Y
Sbjct: 52 AKTQIVGWPPVRSNRKNNNNKNVS--------------YVKVSMDGAPYLRKIDLKMYKN 97
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
Y EL ALE MF FT+G+Y G GS +V TYEDKDGDWMLVG
Sbjct: 98 YPELLKALENMFK-FTVGEYSEREGY--------------KGSGFVPTYEDKDGDWMLVG 142
Query: 240 DVPWEMFMSSCKRLRIMKGSEA 261
DVPW+MF SSC++LRIMKGSEA
Sbjct: 143 DVPWDMFSSSCQKLRIMKGSEA 164
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 92/166 (55%), Gaps = 28/166 (16%)
Query: 122 AQVVGWPPIRSFRKNSL----ATTSKNTEEVDGK----------------GGPSGLFVKV 161
+QVVGWPPI S R NSL AT S EE GK G F+KV
Sbjct: 74 SQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKV 133
Query: 162 SMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHG 221
+MDG RKVDL +S+Y+ L+ LE MF G G + + LL G
Sbjct: 134 NMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLR-------LLDG 186
Query: 222 S-EYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLGC 266
S E+VLTYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GL
Sbjct: 187 SSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAA 232
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 92/166 (55%), Gaps = 28/166 (16%)
Query: 122 AQVVGWPPIRSFRKNSL----ATTSKNTEEVDGK----------------GGPSGLFVKV 161
+QVVGWPPI S R NSL AT S EE GK G F+KV
Sbjct: 74 SQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKV 133
Query: 162 SMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHG 221
+MDG RKVDL +S+Y+ L+ LE MF G G + + LL G
Sbjct: 134 NMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLR-------LLDG 186
Query: 222 S-EYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLGC 266
S E+VLTYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GL
Sbjct: 187 SSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAA 232
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 92/166 (55%), Gaps = 28/166 (16%)
Query: 122 AQVVGWPPIRSFRKNSL----ATTSKNTEEVDGK----------------GGPSGLFVKV 161
+QVVGWPPI S R NSL AT S EE GK G F+KV
Sbjct: 75 SQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKV 134
Query: 162 SMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHG 221
+MDG RKVDL +S+Y+ L+ LE MF G G + + LL G
Sbjct: 135 NMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLR-------LLDG 187
Query: 222 S-EYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLGC 266
S E+VLTYEDK+GDWMLVGDVPW MF++S KRLR+MK SEA GL
Sbjct: 188 SSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAA 233
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 86/146 (58%), Gaps = 27/146 (18%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
K+Q VGWPP+ S+R+ KN EE G +VKVSMDG PY+RK+DL + ++
Sbjct: 67 VKSQAVGWPPVCSYRRK------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNS 116
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
Y L + LE +F C IG + E K EY++ YEDKD DWMLVG
Sbjct: 117 YINLVTVLENLFGCLGIG-----------VAKEGK------KCEYIIIYEDKDRDWMLVG 159
Query: 240 DVPWEMFMSSCKRLRIMKGSEARGLG 265
DVPW+MF SCKRLRI+K S+A G G
Sbjct: 160 DVPWQMFKESCKRLRIVKRSDATGFG 185
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 92/160 (57%), Gaps = 20/160 (12%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSK---------------NTEEVDGKGGPSGLFVKVSMD 164
T QVVGWPPIR++R NS+ +K N D + +FVKV+MD
Sbjct: 85 TSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMD 144
Query: 165 GAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSE- 223
G P RK+DL + Y+ LS+ LE+MF +G L + E+ +K L GS
Sbjct: 145 GIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT----LETDGHMETPVKILPDGSSG 200
Query: 224 YVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARG 263
VLTYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G
Sbjct: 201 LVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 92/162 (56%), Gaps = 23/162 (14%)
Query: 124 VVGWPPIRSFRKNSLATTSKNTEEVDGKGGP---------------SGLFVKVSMDGAPY 168
VVGWPP+RSFRKN +T+S GG G+FVK++MDG P
Sbjct: 104 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPI 163
Query: 169 LRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGS-EYVLT 227
RKVDL Y++Y++LS ++K+F Q G G E + LL G E+ LT
Sbjct: 164 GRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQG----EEKPIIGLLDGKGEFTLT 219
Query: 228 YEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSE---ARGLGC 266
YED +GD MLVGDVPW+MF+SS KRLR++K SE A GC
Sbjct: 220 YEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTFGC 261
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 87/147 (59%), Gaps = 25/147 (17%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGL-FVKVSMDGAPYLRKVDLRNYS 178
K+QVVGWPP+ S+RK + + T+ GL +VKVSMDG PYLRK+DL +
Sbjct: 67 AKSQVVGWPPVCSYRKKNSCKEASTTK--------VGLGYVKVSMDGVPYLRKMDLGSSQ 118
Query: 179 AYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLV 238
Y +L+ AL+K+F IG LKD EYV YEDKDGDWML
Sbjct: 119 GYDDLAFALDKLFGFRGIG---------------VALKDG-DNCEYVTIYEDKDGDWMLA 162
Query: 239 GDVPWEMFMSSCKRLRIMKGSEARGLG 265
GDVPW MF+ SCKRLRIMK S+A G G
Sbjct: 163 GDVPWGMFLESCKRLRIMKRSDATGFG 189
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 92/160 (57%), Gaps = 20/160 (12%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSK---------------NTEEVDGKGGPSGLFVKVSMD 164
T QVVGWPPIR++R NS+ +K N D + +FVKV+MD
Sbjct: 85 TSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMD 144
Query: 165 GAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSE- 223
G P RK+DL + Y+ LS+ LE+MF +G L + E+ +K L GS
Sbjct: 145 GIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT----LETDGHMETPVKILPDGSSG 200
Query: 224 YVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARG 263
VLTYEDK+GDWMLVGDVPW MF+ S +RLRIMK SEA G
Sbjct: 201 LVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATG 240
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 96/166 (57%), Gaps = 31/166 (18%)
Query: 122 AQVVGWPPIRSFRKNSL----ATTSKNTEEVDG---------------KGGP--SGL-FV 159
+QVVGWPPI R NSL A + EE DG K P GL FV
Sbjct: 68 SQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFV 127
Query: 160 KVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLL 219
KV+MDG RKVD+R +S+Y+ L+ LE+MF +G G RE + +L D
Sbjct: 128 KVNMDGVGIGRKVDMRAHSSYENLAQTLEEMF-------FGMTGTTCREKVKPLRLLD-- 178
Query: 220 HGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLG 265
S++VLTYEDK+GDWMLVGDVPW MF++S KRLRIM SEA GL
Sbjct: 179 GSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLA 224
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 89/173 (51%), Gaps = 29/173 (16%)
Query: 120 TKAQVVGWPPIRSFRKNSLA-------------------------TTSKNTEEVDGKGGP 154
T+ VGWPP+R++R NSL +KN + K
Sbjct: 90 TRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSR 149
Query: 155 SGLFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGL-GREMLSES 213
+ + VKV+MDG RKVDL +Y L L+ MF F I + G + + E+
Sbjct: 150 TSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMF--FQIPSPVTRSNTQGYKTIKET 207
Query: 214 KLKDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLG 265
LL GS EY++TY+DKDGDWMLVGDVPW+MF+ S RLRIMK S G+G
Sbjct: 208 CTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGVG 260
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 91/161 (56%), Gaps = 31/161 (19%)
Query: 124 VVGWPPIRSFRKN---------------SLATTSKN--------TEEVDGKGGPSGLFVK 160
VVGWPP+RSFRKN S T KN T E +GG +FVK
Sbjct: 97 VVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGG---MFVK 153
Query: 161 VSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLH 220
++M G P RKVDL +++Y++LS ++K+F G + + E + LL
Sbjct: 154 INMYGVPIGRKVDLSAHNSYEQLSFTVDKLFR----GLLAAQRDFPSSIEDEKPITGLLD 209
Query: 221 GS-EYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSE 260
G+ EY LTYED +GD MLVGDVPW+MF+SS KRLR++K SE
Sbjct: 210 GNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 83/145 (57%), Gaps = 32/145 (22%)
Query: 120 TKAQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSA 179
T Q+VGWPP+ + RK T + +VKV++DGA YLRKVDL Y
Sbjct: 67 TNDQLVGWPPVATARK----TVRRK-------------YVKVALDGAAYLRKVDLGMYDC 109
Query: 180 YQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVG 239
Y +L +ALE MF + +++ ++ +L E+V TYEDKDGD MLVG
Sbjct: 110 YGQLFTALENMF---------------QGIITICRVTELERKGEFVATYEDKDGDLMLVG 154
Query: 240 DVPWEMFMSSCKRLRIMKGSEARGL 264
DVPW MF+ SCKR+R+MK +A GL
Sbjct: 155 DVPWMMFVESCKRMRLMKTGDAIGL 179
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 79/144 (54%), Gaps = 22/144 (15%)
Query: 122 AQVVGWPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAYQ 181
A VVGWPP+RS R+N L K + L+VK++M+G P RKV+L Y+ YQ
Sbjct: 47 APVVGWPPVRSSRRN-LTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQ 105
Query: 182 ELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDV 241
+LS A++++FS L R+ Y L YED +GD +LVGDV
Sbjct: 106 QLSHAVDQLFSK------KDSWDLNRQ---------------YTLVYEDTEGDKVLVGDV 144
Query: 242 PWEMFMSSCKRLRIMKGSEARGLG 265
PWEMF+S+ KRL ++K S A L
Sbjct: 145 PWEMFVSTVKRLHVLKTSHAFSLS 168
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 24/131 (18%)
Query: 127 WPPIRSFRKNSLATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAYQELSSA 186
WPPI+S +++L + +G + LFVKV M+G P RK+DL +S Y+ L
Sbjct: 48 WPPIKSRLRDTL-----KGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLEN 102
Query: 187 LEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMF 246
L MF I G R+ +VLTYEDKDGDWM+VGD+PW+MF
Sbjct: 103 LSHMFDTSIIC-----GNRDRK--------------HHVLTYEDKDGDWMMVGDIPWDMF 143
Query: 247 MSSCKRLRIMK 257
+ + +RL+I +
Sbjct: 144 LETVRRLKITR 154
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 15/101 (14%)
Query: 157 LFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLK 216
+VKV+M+G P RK+DL + + Y +L + L+ MF+ + ++ +
Sbjct: 83 FYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILW---------------AEEE 127
Query: 217 DLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 257
D+ +VLTY DK+GDWM+VGDVPWEMF+SS +RL+I +
Sbjct: 128 DMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 15/103 (14%)
Query: 157 LFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLK 216
+VKV+M+G P RK+DL + + Y++L L+ MF+ + ++ +
Sbjct: 85 FYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILW---------------AEEE 129
Query: 217 DLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGS 259
D+ + +VLTY DK+GDWM+VGDVPWEMF+S+ +RL+I + +
Sbjct: 130 DMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
>AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID
INDUCIBLE 29); transcription factor |
chr4:15583479-15584628 FORWARD
Length = 251
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 20/101 (19%)
Query: 157 LFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLK 216
++VKV MDG RKVD++ +++Y+ L+++L MF+ + RE
Sbjct: 160 MYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFT--------EYEDCDRE-------- 203
Query: 217 DLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 257
+ Y T++ K+GDW+L GDV W++F S R+ I++
Sbjct: 204 ----DTNYTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
>AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID
INDUCIBLE 34); transcription factor |
chr1:5182256-5183243 REVERSE
Length = 185
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 158 FVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKD 217
+VKV+MDG RKV + ++ +Y L+ LE MF M S S L+
Sbjct: 94 YVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFG----------------MQSVSGLRL 137
Query: 218 LLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEA 261
SE+ L Y D++G W GDVPW F+ S +RLRI + ++A
Sbjct: 138 FQMESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRNDA 181
>AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID
INDUCIBLE 32); transcription factor | chr2:118385-119219
FORWARD
Length = 191
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 158 FVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKD 217
+VKV++DG RKV L + AY L+ L MF T+ S L+
Sbjct: 100 YVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMFGMQTV----------------SGLRL 143
Query: 218 LLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEA 261
SE+ L Y D++G W VGDVPW+ F+ S R+RI + ++A
Sbjct: 144 FQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDA 187
>AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241375 FORWARD
Length = 173
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 50/96 (52%), Gaps = 22/96 (22%)
Query: 122 AQVVGWPPIRSFRKNSL----ATTSKNTEEVDG---------------KGGP--SGL-FV 159
+QVVGWPPI R NSL A + EE DG K P GL FV
Sbjct: 68 SQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFV 127
Query: 160 KVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFT 195
KV+MDG RKVD+R +S+Y+ L+ LE+MF T
Sbjct: 128 KVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMT 163
>AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 935
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 143 KNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSH 202
+++E + + S FVKV G+ + R +D+ +S+Y EL S L +MF
Sbjct: 783 QSSENLGSENPQSNTFVKVYKSGS-FGRSLDISKFSSYHELRSELARMF----------- 830
Query: 203 GGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAR 262
GL E +L+D + S + L + D++ D +L+GD PW F+SS ++I+ E +
Sbjct: 831 -GL------EGQLEDPVR-SGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQ 882
Query: 263 GLG 265
+G
Sbjct: 883 QMG 885
>AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 933
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 20/123 (16%)
Query: 143 KNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSH 202
+++E + + S FVKV G+ + R +D+ +S+Y EL S L +MF
Sbjct: 781 QSSENLGSENPQSNTFVKVYKSGS-FGRSLDISKFSSYHELRSELARMF----------- 828
Query: 203 GGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAR 262
GL E +L+D + S + L + D++ D +L+GD PW F+SS ++I+ E +
Sbjct: 829 -GL------EGQLEDPVR-SGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQ 880
Query: 263 GLG 265
+G
Sbjct: 881 QMG 883
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN RESPONSE
FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1086
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 19/95 (20%)
Query: 170 RKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGSEYVLTYE 229
R +D+ YS Y EL L +MF E +L+D L S++ L Y
Sbjct: 971 RSIDVTRYSGYDELRHDLARMFGI------------------EGQLEDPL-TSDWKLVYT 1011
Query: 230 DKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGL 264
D + D +LVGD PWE F++ + ++I+ E + +
Sbjct: 1012 DHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQM 1046
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 159 VKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDL 218
+KV M G R VDL +Y EL LEKMF E+ E KD
Sbjct: 493 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF----------------EIEGELSPKD- 535
Query: 219 LHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGL 264
++ + + D +GD MLVGD PW F K+L I E + +
Sbjct: 536 ----KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 577
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 159 VKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDL 218
+KV M G R VDL +Y EL LEKMF E+ E KD
Sbjct: 406 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF----------------EIEGELSPKD- 448
Query: 219 LHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGL 264
++ + + D +GD MLVGD PW F K+L I E + +
Sbjct: 449 ----KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 490
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 21/106 (19%)
Query: 159 VKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDL 218
+KV M G R VDL +Y EL LEKMF E+ E KD
Sbjct: 514 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF----------------EIEGELSPKD- 556
Query: 219 LHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGL 264
++ + + D +GD MLVGD PW F K+L I E + +
Sbjct: 557 ----KWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKM 598
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 21/108 (19%)
Query: 160 KVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLL 219
KV M G P R VDL Y EL +EK+F +L
Sbjct: 525 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDI---------------------KGELR 563
Query: 220 HGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLGCG 267
+++ + + D +GD MLVGD PW F + KR+ I E + + G
Sbjct: 564 SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 611
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 21/108 (19%)
Query: 160 KVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLL 219
KV M G P R VDL Y EL +EK+F +L
Sbjct: 527 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDI---------------------KGELR 565
Query: 220 HGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLGCG 267
+++ + + D +GD MLVGD PW F + KR+ I E + + G
Sbjct: 566 SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 613
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 138 LATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIG 197
T + + ++ K S KV G R VDL + Y+EL + L+++F
Sbjct: 715 FQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE----- 769
Query: 198 QYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 257
E+++ K ++++ Y D++ D MLVGD PW+ F +++ I
Sbjct: 770 -------FNGELMAPKK--------DWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYT 814
Query: 258 GSEARGLGCGV 268
E R + G
Sbjct: 815 KEEVRKMNPGT 825
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 138 LATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIG 197
T + + ++ K S KV G R VDL + Y+EL + L+++F
Sbjct: 715 FQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE----- 769
Query: 198 QYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 257
E+++ K ++++ Y D++ D MLVGD PW+ F +++ I
Sbjct: 770 -------FNGELMAPKK--------DWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYT 814
Query: 258 GSEARGLGCGV 268
E R + G
Sbjct: 815 KEEVRKMNPGT 825
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 138 LATTSKNTEEVDGKGGPSGLFVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIG 197
T + + ++ K S KV G R VDL + Y+EL + L+++F
Sbjct: 715 FQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFE----- 769
Query: 198 QYGSHGGLGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMK 257
E+++ K ++++ Y D++ D MLVGD PW+ F +++ I
Sbjct: 770 -------FNGELMAPKK--------DWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYT 814
Query: 258 GSEARGLGCGV 268
E R + G
Sbjct: 815 KEEVRKMNPGT 825
>AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE FACTOR
8); transcription factor | chr5:14630151-14634106
FORWARD
Length = 811
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 158 FVKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKD 217
FVKV G+ R +D+ +S+Y EL L KMF+ E L+D
Sbjct: 707 FVKVYKSGS-VGRSLDISRFSSYHELREELGKMFAI------------------EGLLED 747
Query: 218 LLHGSEYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIMKGSEARGLG 265
L S + L + DK+ D +L+GD PWE F+++ ++I+ + +G
Sbjct: 748 PLR-SGWQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPEDVHQMG 794
>AT5G57420.1 | Symbols: IAA33 | IAA33 (INDOLE-3-ACETIC ACID
INDUCIBLE 33); transcription factor |
chr5:23270024-23270959 FORWARD
Length = 171
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 163 MDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGGLGREMLSESKLKDLLHGS 222
++G +++ L + +YQ L+SAL +MF G + + L + + G
Sbjct: 79 LEGRSICQRISLDKHGSYQSLASALRQMFVD------------GADSTDDLDLSNAIPG- 125
Query: 223 EYVLTYEDKDGDWMLVGDVPWEMFMSSCKRLRIM 256
+++ YED + D +L GD+ W+ F+ KR+RI+
Sbjct: 126 -HLIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 158