Jatropha Genome Database

JcCB0058711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058711.10 - phase: 0 
         (363 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25570.1 | Symbols:  | adenosylmethionine decarboxylase famil...   323   8e-89
AT3G02470.4 | Symbols:  | SAMDC (S-ADENOSYLMETHIONINE DECARBOXYL...   321   4e-88
AT3G02470.3 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE DECAR...   321   4e-88
AT3G02470.1 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE DECAR...   321   4e-88
AT5G15950.2 | Symbols:  | adenosylmethionine decarboxylase famil...   299   2e-81
AT5G15950.1 | Symbols:  | adenosylmethionine decarboxylase famil...   299   2e-81
AT5G18930.1 | Symbols: BUD2, SAMDC4 | BUD2 (BUSHY AND DWARF 2); ...   232   2e-61

>AT3G25570.1 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr3:9287413-9288462 REVERSE
          Length = 349

 Score =  323 bits (829), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 176/338 (52%), Positives = 220/338 (65%), Gaps = 7/338 (2%)

Query: 8   MSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSE 67
           M+ S  GFEGFEKRLEI+F E   F DP G+ LR+LT+SQLD IL PA CTIV+ L+NS 
Sbjct: 1   MAVSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSF 60

Query: 68  FDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPN 127
            DSYVLSESSLFV+P+KI++KTCGTT                      V Y+RGSFIFP 
Sbjct: 61  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILRLADSLCLTVKSVRYTRGSFIFPG 120

Query: 128 YQPAPHRSFSEEVTALNEFFGHLK--TEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHT 185
            Q  PHRSFSEEV  L+++FG L   ++A+V+GGS      WH+YSASS     +     
Sbjct: 121 AQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPV 180

Query: 186 DTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMN 245
            TL  E+CMTGL+  KA+VFFK ++  SAS+MT SSGI  ILP   ICDF+F+PCGYSMN
Sbjct: 181 YTL--EMCMTGLDNIKASVFFKTNS-VSASEMTISSGIRNILPGSEICDFNFEPCGYSMN 237

Query: 246 GIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHGG 305
            IEG A ST+HVTPEDGFSYAS+E +G +   +    LV RV+ CFGP EFS+AV  + G
Sbjct: 238 SIEGDAVSTIHVTPEDGFSYASFETVGYDLKALNFKELVDRVLVCFGPEEFSVAVHANLG 297

Query: 306 ADKWWPNECDDVDGYSRRSMVEQELVSGGGRVVVYMTY 343
            +    +   DV+GY  +    +EL  GG   V+Y  +
Sbjct: 298 TEVLASDCVADVNGYFSQERELEELGLGGS--VLYQRF 333


>AT3G02470.4 | Symbols:  | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  321 bits (823), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/339 (49%), Positives = 222/339 (65%), Gaps = 8/339 (2%)

Query: 8   MSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSE 67
           M+ S IGFEG+EKRLE+TF EP IF+D  G GLRALT+SQLD IL PA CTIV+ LSN +
Sbjct: 1   MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQ 60

Query: 68  FDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPN 127
            DSYVLSESS FV+P+K+++KTCGTT                      V Y+RGSF+ P 
Sbjct: 61  LDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPG 120

Query: 128 YQPAPHRSFSEEVTALNEFFGH--LKTEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHT 185
            QP PHRSFSEEV+ L+  F    L + AY++G        WH+Y+AS+  S      + 
Sbjct: 121 GQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETK-KWHVYAASAQDSSNC---NN 176

Query: 186 DTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMN 245
           +   +E+CMTGL+++KAAVF+K  AD + S MT +SGI +ILP   ICDF+F+PCGYSMN
Sbjct: 177 NVYTLEMCMTGLDREKAAVFYKDEADKTGS-MTDNSGIRKILPKSEICDFEFEPCGYSMN 235

Query: 246 GIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHGG 305
            IEG A ST+HVTPEDGFSYAS+E +G + + + L+ LV RV++CF P +FS+AV    G
Sbjct: 236 SIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVG 295

Query: 306 ADKWWPNECDDVDGYSRRSMVEQELVSGGGRVVVYMTYE 344
           A+ + P    D++ Y  R    + L    G  V+Y T+E
Sbjct: 296 ANSYKPEITVDLEDYGCRERTFESLGEESG-TVMYQTFE 333


>AT3G02470.3 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  321 bits (823), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/339 (49%), Positives = 222/339 (65%), Gaps = 8/339 (2%)

Query: 8   MSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSE 67
           M+ S IGFEG+EKRLE+TF EP IF+D  G GLRALT+SQLD IL PA CTIV+ LSN +
Sbjct: 1   MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQ 60

Query: 68  FDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPN 127
            DSYVLSESS FV+P+K+++KTCGTT                      V Y+RGSF+ P 
Sbjct: 61  LDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPG 120

Query: 128 YQPAPHRSFSEEVTALNEFFGH--LKTEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHT 185
            QP PHRSFSEEV+ L+  F    L + AY++G        WH+Y+AS+  S      + 
Sbjct: 121 GQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETK-KWHVYAASAQDSSNC---NN 176

Query: 186 DTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMN 245
           +   +E+CMTGL+++KAAVF+K  AD + S MT +SGI +ILP   ICDF+F+PCGYSMN
Sbjct: 177 NVYTLEMCMTGLDREKAAVFYKDEADKTGS-MTDNSGIRKILPKSEICDFEFEPCGYSMN 235

Query: 246 GIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHGG 305
            IEG A ST+HVTPEDGFSYAS+E +G + + + L+ LV RV++CF P +FS+AV    G
Sbjct: 236 SIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVG 295

Query: 306 ADKWWPNECDDVDGYSRRSMVEQELVSGGGRVVVYMTYE 344
           A+ + P    D++ Y  R    + L    G  V+Y T+E
Sbjct: 296 ANSYKPEITVDLEDYGCRERTFESLGEESG-TVMYQTFE 333


>AT3G02470.1 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  321 bits (823), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/339 (49%), Positives = 222/339 (65%), Gaps = 8/339 (2%)

Query: 8   MSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSE 67
           M+ S IGFEG+EKRLE+TF EP IF+D  G GLRALT+SQLD IL PA CTIV+ LSN +
Sbjct: 1   MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQ 60

Query: 68  FDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPN 127
            DSYVLSESS FV+P+K+++KTCGTT                      V Y+RGSF+ P 
Sbjct: 61  LDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPG 120

Query: 128 YQPAPHRSFSEEVTALNEFFGH--LKTEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHT 185
            QP PHRSFSEEV+ L+  F    L + AY++G        WH+Y+AS+  S      + 
Sbjct: 121 GQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETK-KWHVYAASAQDSSNC---NN 176

Query: 186 DTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMN 245
           +   +E+CMTGL+++KAAVF+K  AD + S MT +SGI +ILP   ICDF+F+PCGYSMN
Sbjct: 177 NVYTLEMCMTGLDREKAAVFYKDEADKTGS-MTDNSGIRKILPKSEICDFEFEPCGYSMN 235

Query: 246 GIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHGG 305
            IEG A ST+HVTPEDGFSYAS+E +G + + + L+ LV RV++CF P +FS+AV    G
Sbjct: 236 SIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVG 295

Query: 306 ADKWWPNECDDVDGYSRRSMVEQELVSGGGRVVVYMTYE 344
           A+ + P    D++ Y  R    + L    G  V+Y T+E
Sbjct: 296 ANSYKPEITVDLEDYGCRERTFESLGEESG-TVMYQTFE 333


>AT5G15950.2 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD
          Length = 362

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/339 (48%), Positives = 216/339 (63%), Gaps = 9/339 (2%)

Query: 8   MSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSE 67
           M+ S IGFEG+EKRLE+TF EP +F D  G+GLRAL +SQ+D IL+PA CTIV+ LSN +
Sbjct: 1   MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQ 60

Query: 68  FDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPN 127
            DSYVLSESSLF+FP+KIV+KTCGTT                      V Y+RGSF+ P 
Sbjct: 61  LDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120

Query: 128 YQPAPHRSFSEEVTALNEFFGH--LKTEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHT 185
            QP PHR+FSEEV+ L+  F    L + AY++G        WH+YSASS +S      +T
Sbjct: 121 GQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETK-KWHVYSASSANSNNKNNVYT 179

Query: 186 DTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMN 245
               +E+CMTGL+K KA+VF+K  +  SA  MT +SGI +ILP   ICDF+F+PCGYSMN
Sbjct: 180 ----LEMCMTGLDKDKASVFYKNESS-SAGSMTDNSGIRKILPQSQICDFEFEPCGYSMN 234

Query: 246 GIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHGG 305
            IEG A ST+HVTPEDGFSYAS+E +G + + + L+ LV +V+ CF P +FS+AV     
Sbjct: 235 SIEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVA 294

Query: 306 ADKWWPNECDDVDGYSRRSMVEQELVSGGGRVVVYMTYE 344
              +      D+D Y  +    + L    G  V+Y  +E
Sbjct: 295 QKSYDSGLSVDLDDYGCKESTMESLGEERG-TVMYQRFE 332


>AT5G15950.1 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD
          Length = 362

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/339 (48%), Positives = 216/339 (63%), Gaps = 9/339 (2%)

Query: 8   MSASPIGFEGFEKRLEITFNEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSE 67
           M+ S IGFEG+EKRLE+TF EP +F D  G+GLRAL +SQ+D IL+PA CTIV+ LSN +
Sbjct: 1   MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQ 60

Query: 68  FDSYVLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPN 127
            DSYVLSESSLF+FP+KIV+KTCGTT                      V Y+RGSF+ P 
Sbjct: 61  LDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120

Query: 128 YQPAPHRSFSEEVTALNEFFGH--LKTEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHT 185
            QP PHR+FSEEV+ L+  F    L + AY++G        WH+YSASS +S      +T
Sbjct: 121 GQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETK-KWHVYSASSANSNNKNNVYT 179

Query: 186 DTLNVEICMTGLEKKKAAVFFKRSADYSASDMTRSSGIFEILPSHLICDFDFDPCGYSMN 245
               +E+CMTGL+K KA+VF+K  +  SA  MT +SGI +ILP   ICDF+F+PCGYSMN
Sbjct: 180 ----LEMCMTGLDKDKASVFYKNESS-SAGSMTDNSGIRKILPQSQICDFEFEPCGYSMN 234

Query: 246 GIEGTAFSTVHVTPEDGFSYASYEVMGLEPSQVKLTTLVKRVVNCFGPSEFSIAVTCHGG 305
            IEG A ST+HVTPEDGFSYAS+E +G + + + L+ LV +V+ CF P +FS+AV     
Sbjct: 235 SIEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVA 294

Query: 306 ADKWWPNECDDVDGYSRRSMVEQELVSGGGRVVVYMTYE 344
              +      D+D Y  +    + L    G  V+Y  +E
Sbjct: 295 QKSYDSGLSVDLDDYGCKESTMESLGEERG-TVMYQRFE 332


>AT5G18930.1 | Symbols: BUD2, SAMDC4 | BUD2 (BUSHY AND DWARF 2);
           adenosylmethionine decarboxylase | chr5:6312172-6313215
           REVERSE
          Length = 347

 Score =  232 bits (592), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/307 (43%), Positives = 183/307 (59%), Gaps = 22/307 (7%)

Query: 14  GFEGFEKRLEITF--NEPPIFKDPTGRGLRALTRSQLDSILEPACCTIVTQLSNSEFDSY 71
           GFEGFEKRLE+ F  ++ PI K+P G  LR +    LD +L    CT+V+ ++N  FD+Y
Sbjct: 5   GFEGFEKRLELRFFDDDKPITKNPMG--LRLIDFESLDQVLNEVQCTVVSAVANRSFDAY 62

Query: 72  VLSESSLFVFPFKIVLKTCGTTXXXXXXXXXXXXXXXXXXXXFDVNYSRGSFIFPNYQPA 131
           VLSESSLFV+P KI++KTCGTT                        YSRGSFIFP  QP 
Sbjct: 63  VLSESSLFVYPTKIIIKTCGTTQLLKSIRPLIHLARNLGLTLRACRYSRGSFIFPKAQPF 122

Query: 132 PHRSFSEEVTALNEFFGH--LKTEAYVLGGSSAPNWNWHIYSASSGSSQPLMKDHTDTLN 189
           P+ SF +EV  + E         +A V+  S+ P+  WH+++AS+      ++     + 
Sbjct: 123 PYTSFKDEVIVVEESLPKSLCYRKASVMTPSNNPSRAWHVFTASAD-----VESDEHVVV 177

Query: 190 VEICMTGLEKKKAAVFFKR------SADYSASDMTRSSGIFEILPSHLICDFDFDPCGYS 243
           VE+CMT L++  A  FFKR      ++D +  +MTR SGI  I  +  ICDF FDPCGYS
Sbjct: 178 VEVCMTELDRVNARSFFKRKGDEKNNSDSAGKEMTRLSGIDNINANAYICDFAFDPCGYS 237

Query: 244 MNGIEGTAFSTVHVTPEDGFSYASYEVMGL---EPSQVKLTTLVKRVVNCFGPSEFSIAV 300
           MNG++G  +ST+HVTPEDGFSYAS+E  GL   +     ++ ++ R ++ F PS+ SIA 
Sbjct: 238 MNGVDGDRYSTIHVTPEDGFSYASFEC-GLSLYDNGHEDISEVLSRAIDVFRPSDVSIAT 296

Query: 301 TCHGGAD 307
           T +GG D
Sbjct: 297 T-YGGED 302