Jatropha Genome Database

JcCB0058191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058191.20 - phase: 0 /partial/short
         (49 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24170.3 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide redu...    82   5e-17
AT3G24170.2 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide redu...    82   5e-17
AT3G24170.1 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide redu...    82   5e-17
AT3G54660.1 | Symbols: GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDU...    59   6e-10

>AT3G24170.3 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide
           reductase); FAD binding / NADP or NADPH binding /
           glutathione-disulfide reductase/ oxidoreductase |
           chr3:8729762-8734115 REVERSE
          Length = 499

 Score = 82.4 bits (202), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 44/49 (89%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRVTAGNKPKTNL 49
           GIA+A+K GATKAQFDSTVGIHPS+AEEFVTMRS++RR+    KPKTNL
Sbjct: 451 GIAIALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRIAHKPKPKTNL 499


>AT3G24170.2 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide
           reductase); FAD binding / NADP or NADPH binding /
           glutathione-disulfide reductase/ oxidoreductase |
           chr3:8729762-8734115 REVERSE
          Length = 499

 Score = 82.4 bits (202), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 44/49 (89%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRVTAGNKPKTNL 49
           GIA+A+K GATKAQFDSTVGIHPS+AEEFVTMRS++RR+    KPKTNL
Sbjct: 451 GIAIALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRIAHKPKPKTNL 499


>AT3G24170.1 | Symbols: ATGR1 | ATGR1 (glutathione-disulfide
           reductase); FAD binding / NADP or NADPH binding /
           glutathione-disulfide reductase/ oxidoreductase |
           chr3:8729762-8734115 REVERSE
          Length = 499

 Score = 82.4 bits (202), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 44/49 (89%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRRVTAGNKPKTNL 49
           GIA+A+K GATKAQFDSTVGIHPS+AEEFVTMRS++RR+    KPKTNL
Sbjct: 451 GIAIALKCGATKAQFDSTVGIHPSSAEEFVTMRSVTRRIAHKPKPKTNL 499


>AT3G54660.1 | Symbols: GR, EMB2360, ATGR2 | GR (GLUTATHIONE
           REDUCTASE); ATP binding / glutathione-disulfide
           reductase | chr3:20230356-20233100 REVERSE
          Length = 565

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 33/38 (86%)

Query: 1   GIAVAIKSGATKAQFDSTVGIHPSAAEEFVTMRSLSRR 38
           G  VA+K+G TKA FD+TVG+HP+AAEEFVTMR+ +R+
Sbjct: 508 GFGVAVKAGLTKADFDATVGVHPTAAEEFVTMRAPTRK 545