Jatropha Genome Database

JcCB0058191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0058191.10 + phase: 0 /partial
         (126 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13670.1 | Symbols: PTAC5 | PTAC5 (PLASTID TRANSCRIPTIONALLY ...   192   3e-50

>AT4G13670.1 | Symbols: PTAC5 | PTAC5 (PLASTID TRANSCRIPTIONALLY
           ACTIVE5); heat shock protein binding / unfolded protein
           binding | chr4:7948644-7950779 FORWARD
          Length = 387

 Score =  192 bits (489), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 83/123 (67%), Positives = 104/123 (84%)

Query: 1   EGANGAAVTSVTEISEKQHKVVKEEGATEVEVSQHRVFLLGENRWEEPSRLIGRDKHVHV 60
           E  NGA  TSVT++ EK+  +VK++   EV+V+Q+RVFLLGENRWE+PSRLIGR+K V  
Sbjct: 262 EAGNGAVFTSVTQVPEKKQSIVKDQSDREVDVTQNRVFLLGENRWEDPSRLIGRNKPVDR 321

Query: 61  SKTKETTSKCLSCRGEGRLLCTECDGTGEPNIEPQFLEWVDEGTKCPYCEGLGYTICDVC 120
           S++  T ++C++CRGEGRL+C ECDGTGEPNIEPQF+EWV E TKCPYCEGLGYT+CDVC
Sbjct: 322 SESTNTKTRCITCRGEGRLMCLECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDVC 381

Query: 121 EGK 123
           +GK
Sbjct: 382 DGK 384