Jatropha Genome Database

JcCB0057861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0057861.10 - phase: 1 /TE/partial
         (1102 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   409   e-114
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   214   3e-55
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...   117   6e-26
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    69   2e-11

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/550 (39%), Positives = 317/550 (57%), Gaps = 8/550 (1%)

Query: 541  LHQACPFPLLHXVQMRQNHKLLLCPTLLFHCCNLVSQHDLS--IIFSKPMKIF-DYLVVA 597
            +    P P +H    R+  K         H    ++ HD+S  + + K   ++  +LV  
Sbjct: 22   IQNDVPEPSVH-TSHRRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCI 80

Query: 598  NTPSLPHTVAQARKNPRWCSAMEEEYNALIRNQTWDLVPFSYSYNVVDCKWLFRTKFKAY 657
                 P T  +A++   WC AM++E  A+    TW++     +   + CKW+++ K+ + 
Sbjct: 81   AKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 140

Query: 658  GEIDKYKARLVAKGFTQQSGIDYHSTFSPVVKPATIRLILTLAAKFQWPLHQLDVNNAFL 717
            G I++YKARLVAKG+TQQ GID+  TFSPV K  +++LIL ++A + + LHQLD++NAFL
Sbjct: 141  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200

Query: 718  QGKLEDEVYMRQPKGFIHPDF----PNYVCKLKKAIYGLRQAPRAWYMALKNFLLSYGFH 773
             G L++E+YM+ P G+         PN VC LKK+IYGL+QA R W++     L+ +GF 
Sbjct: 201  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260

Query: 774  ESKSNSSLFLLHKSTAMLYILVYVDDIIITGNSNSALTHVINALSNHFSLKDLGQLHYFL 833
            +S S+ + FL   +T  L +LVYVDDIII  N+++A+  + + L + F L+DLG L YFL
Sbjct: 261  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320

Query: 834  GVEVLHQPEGIYLSHSKYIFDILQKYNMQDCHCISSPMSITPLLTLNDGSGKIDAQQYRE 893
            G+E+     GI +   KY  D+L +  +  C   S PM  +   + + G   +DA+ YR 
Sbjct: 321  GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 380

Query: 894  AVGKLQYLSFTRPDISFVVNKXSQFMHTPSITHWQAVKRLFRYVKYTIYHGLFLRRTPAS 953
             +G+L YL  TR DISF VNK SQF   P + H QAV ++  Y+K T+  GLF       
Sbjct: 381  LIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440

Query: 954  QLYVYTNADWAGDPTDRTSTSGYITFLGSSPISWSSKKQHTVARSSTEAEYRAVASAVAE 1013
            QL V+++A +      R ST+GY  FLG+S ISW SKKQ  V++SS EAEYRA++ A  E
Sbjct: 441  QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500

Query: 1014 TNWLQNLLEELQITSFKVPILYCDNVGATYLCQNPVFHSRMKHIAIDFHFVREQVHSKKQ 1073
              WL     ELQ+   K  +L+CDN  A ++  N VFH R KHI  D H VRE+   +  
Sbjct: 501  MMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQAT 560

Query: 1074 IVHHIHSVDQ 1083
            + +   + D+
Sbjct: 561  LSYSFQAYDE 570


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  214 bits (544), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/229 (46%), Positives = 150/229 (65%), Gaps = 7/229 (3%)

Query: 791  LYILVYVDDIIITGNSNSALTHVINALSNHFSLKDLGQLHYFLGVEVLHQPEGIYLSHSK 850
            +Y+L+YVDDI++TG+SN+ L  +I  LS+ FS+KDLG +HYFLG+++   P G++LS +K
Sbjct: 1    MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 851  YIFDILQKYNMQDCHCISSPMSITPLLTLNDGSGKI---DAQQYREAVGKLQYLSFTRPD 907
            Y   IL    M DC  +S+P+     L LN         D   +R  VG LQYL+ TRPD
Sbjct: 61   YAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPD 116

Query: 908  ISFVVNKXSQFMHTPSITHWQAVKRLFRYVKYTIYHGLFLRRTPASQLYVYTNADWAGDP 967
            IS+ VN   Q MH P++  +  +KR+ RYVK TI+HGL++ +     +  + ++DWAG  
Sbjct: 117  ISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCT 176

Query: 968  TDRTSTSGYITFLGSSPISWSSKKQHTVARSSTEAEYRAVASAVAETNW 1016
            + R ST+G+ TFLG + ISWS+K+Q TV+RSSTE EYRA+A   AE  W
Sbjct: 177  STRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score =  117 bits (292), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 53/102 (51%), Positives = 73/102 (71%)

Query: 603 PHTVAQARKNPRWCSAMEEEYNALIRNQTWDLVPFSYSYNVVDCKWLFRTKFKAYGEIDK 662
           P +V  A K+P WC AM+EE +AL RN+TW LVP   + N++ CKW+F+TK  + G +D+
Sbjct: 28  PKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDR 87

Query: 663 YKARLVAKGFTQQSGIDYHSTFSPVVKPATIRLILTLAAKFQ 704
            KARLVAKGF Q+ GI +  T+SPVV+ ATIR IL +A + +
Sbjct: 88  LKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLE 129


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
           chrM:68918-69253 REVERSE
          Length = 111

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 5/88 (5%)

Query: 900 YLSFTRPDISFVVNKXSQFMHTPSITHWQAVKRLFRYVKYTIYHGLFLRRTPASQLYVYT 959
           YL+ TRPD++F VN+ SQF         QAV ++  YVK T+  GLF   T   QL  + 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 960 NADWAGDPTDRTSTSGYIT-----FLGS 982
           ++DWA  P  R S +G+ +     FLG+
Sbjct: 62  DSDWASCPDTRRSVTGFCSLVPLWFLGA 89