Jatropha Genome Database

JcCB0057761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0057761.10 + phase: 2 /partial
         (62 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16785.1 | Symbols: PLDP1, PLDZ1, PLDZETA1, PLD ZETA 1 | PLDP...   105   5e-24
AT3G05630.1 | Symbols: PLDP2, PDLZ2, PLDZETA2 | PLDP2; phospholi...    59   7e-10

>AT3G16785.1 | Symbols: PLDP1, PLDZ1, PLDZETA1, PLD ZETA 1 | PLDP1
            (PHOSPHOLIPASE D P1); phospholipase D |
            chr3:5711329-5718696 FORWARD
          Length = 1096

 Score =  105 bits (262), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 48/63 (76%), Positives = 58/63 (92%), Gaps = 1/63 (1%)

Query: 1    DLGIAPQKLESYQNGEIEKTDPMERLQAVRGHLVSLPLDFMSKEDLRPVFNESEYYAS-H 59
            DLGIAP+KLESY NG+I+++DPM+RL+A++GHLVS PLDFM KEDLRPVFNESEYYAS  
Sbjct: 1034 DLGIAPEKLESYHNGDIKRSDPMDRLKAIKGHLVSFPLDFMCKEDLRPVFNESEYYASPQ 1093

Query: 60   VFY 62
            VF+
Sbjct: 1094 VFH 1096


>AT3G05630.1 | Symbols: PLDP2, PDLZ2, PLDZETA2 | PLDP2; phospholipase
            D | chr3:1635321-1640105 FORWARD
          Length = 1046

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 8/64 (12%)

Query: 1    DLGIAPQKLESYQNGEIEKTDPMERLQAVRGHLVSLPLDFMS-KEDLRPVFNESEYY-AS 58
            DLGIAP++LES        +D  E L+  RG+LV  PL FM  +EDLRP FNESE+Y A 
Sbjct: 989  DLGIAPERLESC------GSDSWEILKETRGNLVCFPLQFMCDQEDLRPGFNESEFYTAP 1042

Query: 59   HVFY 62
             VF+
Sbjct: 1043 QVFH 1046