Jatropha Genome Database

JcCB0056061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0056061.10 - phase: 0 
         (71 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-L...    71   2e-13
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARAB...    70   3e-13
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6...    70   3e-13
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC...    70   3e-13
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC...    70   3e-13
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R...    69   5e-13
AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARAB...    68   1e-12
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2 (RHO-R...    67   2e-12
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 ...    65   1e-11
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP bi...    62   6e-11
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10 (RH...    62   7e-11
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding ...    60   2e-10

>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5
          (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase
          | chr1:28475964-28477377 FORWARD
          Length = 196

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/33 (100%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT
Sbjct: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33


>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3
          (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase |
          chr4:16673176-16674540 FORWARD
          Length = 198

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT 33


>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6
          (ARABIDOPSIS RAC-LIKE 6); GTP binding |
          chr4:17024051-17025514 REVERSE
          Length = 197

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT 33


>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
          ARAC1; GTP binding | chr2:7740313-7741942 FORWARD
          Length = 197

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT 33


>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
          ARAC1; GTP binding | chr2:7740313-7741942 FORWARD
          Length = 197

 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/33 (96%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPT 33


>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
          ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding /
          GTPase activating protein binding / GTPase/ protein
          binding | chr3:19043197-19044215 FORWARD
          Length = 197

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 33/33 (100%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 1  MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPT 33


>AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2
          (ARABIDOPSIS RAC-LIKE 2); GTP binding |
          chr5:18643761-18645758 FORWARD
          Length = 201

 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 32/33 (96%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MS +RFIKCVTVGDGAVGKTCMLISYTSNTFPT
Sbjct: 1  MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPT 33


>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2
          (RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding |
          chr1:6967223-6968603 FORWARD
          Length = 195

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/31 (100%), Positives = 31/31 (100%)

Query: 3  ASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          ASRFIKCVTVGDGAVGKTCMLISYTSNTFPT
Sbjct: 2  ASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 32


>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9
          (RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding |
          chr4:14278289-14279705 FORWARD
          Length = 209

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/33 (90%), Positives = 31/33 (93%)

Query: 1  MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          MSAS+FIKCVTVGDGAVGKTCMLI YTSN FPT
Sbjct: 1  MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPT 33


>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP
          binding | chr5:25237236-25238939 FORWARD
          Length = 215

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 30/32 (93%)

Query: 2  SASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          SAS+FIKCVTVGDGAVGKTCMLI YTSN FPT
Sbjct: 4  SASKFIKCVTVGDGAVGKTCMLICYTSNKFPT 35


>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10
          (RHO-RELATED PROTEIN FROM PLANTS 10); GTP binding /
          GTPase | chr3:17731561-17733241 FORWARD
          Length = 208

 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 30/32 (93%)

Query: 2  SASRFIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          SAS+FIKCVTVGDGAVGKTCMLI YTSN FPT
Sbjct: 4  SASKFIKCVTVGDGAVGKTCMLICYTSNKFPT 35


>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding |
          chr2:18429276-18430636 FORWARD
          Length = 209

 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/28 (96%), Positives = 28/28 (100%)

Query: 6  FIKCVTVGDGAVGKTCMLISYTSNTFPT 33
          FIKCVTVGDGAVGKTC+LISYTSNTFPT
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPT 45