Jatropha Genome Database
- JcCB0055231.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0055231.10 + phase: 1 /partial
(247 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G46912.1 | Symbols: | F-box family protein-related | chr1:17... 114 4e-26
AT2G31470.1 | Symbols: | F-box family protein | chr2:13407492-1... 89 3e-18
AT1G46984.1 | Symbols: | F-box protein-related | chr1:17274722-... 84 1e-16
AT1G46840.1 | Symbols: | F-box family protein | chr1:17270185-1... 82 2e-16
AT5G65850.1 | Symbols: | F-box family protein | chr5:26346317-2... 82 3e-16
AT3G23960.1 | Symbols: | F-box family protein | chr3:8657736-86... 81 5e-16
AT5G42430.1 | Symbols: | F-box family protein | chr5:16971312-1... 80 1e-15
AT1G53790.1 | Symbols: | F-box family protein | chr1:20079694-2... 80 1e-15
AT1G53790.2 | Symbols: | F-box family protein | chr1:20079558-2... 80 2e-15
AT5G62510.1 | Symbols: | F-box family protein | chr5:25095373-2... 76 2e-14
AT1G30790.1 | Symbols: | F-box family protein | chr1:10932713-1... 75 5e-14
AT1G47800.1 | Symbols: | F-box family protein | chr1:17601513-1... 75 5e-14
AT3G49450.1 | Symbols: | F-box family protein | chr3:18337305-1... 71 6e-13
AT5G62660.1 | Symbols: | F-box family protein | chr5:25156326-2... 68 5e-12
AT3G57590.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 7e-12
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-1... 67 1e-11
AT1G30930.1 | Symbols: | F-box family protein | chr1:11014783-1... 66 2e-11
AT1G53550.1 | Symbols: | F-box family protein | chr1:19983411-1... 65 3e-11
AT1G50870.1 | Symbols: | F-box family protein | chr1:18855147-1... 65 4e-11
AT1G53360.1 | Symbols: | F-box family protein-related | chr1:19... 65 4e-11
AT1G33020.1 | Symbols: | F-box family protein | chr1:11962746-1... 64 6e-11
AT3G10240.1 | Symbols: | F-box protein-related | chr3:3166698-3... 64 7e-11
AT1G47730.1 | Symbols: | F-box family protein | chr1:17563931-1... 64 7e-11
AT5G52620.1 | Symbols: | F-box family protein | chr5:21348554-2... 63 1e-10
AT3G61340.1 | Symbols: | F-box family protein | chr3:22701215-2... 63 2e-10
AT1G31000.1 | Symbols: | F-box family protein | chr1:11053377-1... 61 5e-10
AT4G38870.1 | Symbols: | F-box family protein | chr4:18132583-1... 60 9e-10
AT5G52610.1 | Symbols: | F-box family protein | chr5:21346423-2... 60 1e-09
AT4G13060.1 | Symbols: | F-box family protein-related | chr4:76... 60 2e-09
AT2G02660.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 8e-09
AT1G47350.1 | Symbols: | F-box family protein-related | chr1:17... 57 1e-08
AT3G52320.1 | Symbols: | F-box family protein | chr3:19403020-1... 57 2e-08
AT5G15660.1 | Symbols: | F-box family protein | chr5:5095652-50... 56 2e-08
AT4G21240.1 | Symbols: | F-box family protein | chr4:11322411-1... 56 2e-08
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-68... 54 7e-08
AT1G47340.1 | Symbols: | F-box family protein | chr1:17354123-1... 54 7e-08
AT1G32420.1 | Symbols: | F-box family protein | chr1:11701995-1... 54 1e-07
AT1G70380.1 | Symbols: | F-box family protein | chr1:26526212-2... 54 1e-07
AT1G32660.1 | Symbols: | F-box family protein | chr1:11811040-1... 53 1e-07
AT1G47810.1 | Symbols: | F-box family protein | chr1:17603504-1... 53 1e-07
AT5G44345.1 | Symbols: | F-box family protein-related | chr5:17... 53 2e-07
AT1G26510.1 | Symbols: | F-box family protein | chr1:9159906-91... 53 2e-07
AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 3e-07
AT5G50220.1 | Symbols: | F-box family protein | chr5:20446068-2... 52 4e-07
>AT1G46912.1 | Symbols: | F-box family protein-related |
chr1:17272691-17273629 FORWARD
Length = 312
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 118/230 (51%), Gaps = 13/230 (5%)
Query: 24 FMGFDPSNKQYKVL---NSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPF--YAQRESI 76
F G+DP KQ+KVL N +R R + +Y+V TLGT E WR ++ P + + I
Sbjct: 88 FFGYDPIRKQFKVLCWTNFYRQGRTSNEQYQVLTLGTGELLWRKIECLFPHEPHKDKNGI 147
Query: 77 CIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXX 136
CI+GV+++ +W+ R +G +++ FDV+ E F I + +V+ S L+ G+
Sbjct: 148 CINGVLYYIAWLKNRCYDGTEIIVCFDVRSEKFSFIEIE---IKEVKGSILLEYKGKLGV 204
Query: 137 XXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQC 196
+N W+K+ + P Y E ++ S + + +P
Sbjct: 205 LMWSVYSYSAELWVLDDTKNVKWSKYKFVLP-YTASEEVKKSIWATDSGELVWTLSSP-- 261
Query: 197 LSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENILPL 246
LS P YVYY++L +R V+I G+ + S D+ ++LV+ TNYVEN++ L
Sbjct: 262 LSHPLYVYYYNLESQSVREVEIKGMKDKVSRDIGNSLVTFTNYVENLMFL 311
>AT2G31470.1 | Symbols: | F-box family protein |
chr2:13407492-13408655 REVERSE
Length = 387
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE- 59
++TLP ++ + +S + G+DP KQ+KVL S E+ V TLGT+
Sbjct: 155 SLTLPKPKTRKRIWGTSHF------GYDPIEKQFKVL-SMNIGDGVYKEHYVLTLGTENL 207
Query: 60 -WRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGA 118
WR ++ P + ICI+GV+++R+ + + G +++ FDV+ E F I + +
Sbjct: 208 SWRRIECSIPHVHGSKGICINGVLYYRAKADMFS--GTLMIVCFDVRFEKFSYIKILK-- 263
Query: 119 PTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKH-YIIFPSYLKKTETGQ 177
PT SY +LA + W KH Y + P + + G+
Sbjct: 264 PTTTLISYNGKLASLVWEGPSYICGKRFEMWVLGDPEKHEWLKHTYELRPRW--QNVLGE 321
Query: 178 NFIV-AGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSI 236
+ ++ AG T EI+++P+ S PFYV+Y++L R+ IRRV+I G+ +F ++ + + +
Sbjct: 322 DLLIFAGMTGTNEIVLSPKYPSHPFYVFYYNLERNTIRRVEIQGM---GAFKVNEDYIFL 378
Query: 237 TNYVENI 243
++VE++
Sbjct: 379 -DHVEDV 384
>AT1G46984.1 | Symbols: | F-box protein-related |
chr1:17274722-17275834 FORWARD
Length = 370
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 43/253 (16%)
Query: 2 ITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE-- 59
I LP + K+S S S F G+DP KQ+KVL S E++V TLGT
Sbjct: 153 IPLPDLGVKNSHSKS-------FFGYDPIEKQFKVLCI-----TSSKEHQVLTLGTGRKL 200
Query: 60 -WRPLQSGPPFYAQRES--ICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPR 116
WR ++ P Y +++S ICI+GV+++R+ A+++ FDV+ E FR + +
Sbjct: 201 SWRKIEYSYPHYPRKKSNGICINGVLYYRN--------TNAMIVRFDVRSEEFRFVEIK- 251
Query: 117 GAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEI-WTKHYIIFPSYLKKTET 175
VE LI G+ N++ W+KH +FP
Sbjct: 252 ---MYVEILSLINYKGKLGVLFPNTDLAQLWVLDDT---NKVEWSKHNFVFPD------- 298
Query: 176 GQNFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSF--DLSSNL 233
F + DT E+ A C YV Y+DL + +++VKI G+ + S ++
Sbjct: 299 -TTFEAIRATDTGEMFCASSCWRDSLYVSYYDLEKESVKKVKIKGIEDKLSIGKHHANEF 357
Query: 234 VSITNYVENILPL 246
N+VEN++ L
Sbjct: 358 FIFPNHVENVMVL 370
>AT1G46840.1 | Symbols: | F-box family protein |
chr1:17270185-17271706 FORWARD
Length = 475
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 108/238 (45%), Gaps = 33/238 (13%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPST--EYRVFTLGTKE--WRPLQSGPPFYAQRE---- 74
+F +DP+ KQ+KVL ++ +T +Y+V TLGT WR ++ P Y R+
Sbjct: 172 SFFAYDPTEKQFKVLCMTVVNKQQTTSYKYQVLTLGTGPLLWRNIEC-PFMYRLRDKSNR 230
Query: 75 SICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRL---A 131
ICI+GV++F W+ T ++I FDV E F I +E ++++ L
Sbjct: 231 GICINGVLYFIGWIKCST----MIIICFDVSSEKFSFIK--------IENAFIVTLINYR 278
Query: 132 GRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEII 191
G+ +N+ W+KH + P ++ T + T E++
Sbjct: 279 GKLGVYLVVYGSPRGEVWVLDDTKNDNWSKHNFVCPYSGQENSTW-------ATGTGELV 331
Query: 192 MAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSF--DLSSNLVSITNYVENILPLP 247
+ PFYV Y++L R RRV I G+ S D + TN+VEN++ LP
Sbjct: 332 WPSSPWTQPFYVVYYNLERQSFRRVDIKGMENKVSTGKDRYDGFFTFTNHVENLMVLP 389
>AT5G65850.1 | Symbols: | F-box family protein |
chr5:26346317-26347495 FORWARD
Length = 392
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 24 FMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPFYAQRESICIDGV 81
F ++P KQ+KVL S++ S E++V TLGT E WR ++ P ICI+GV
Sbjct: 170 FFVYEPIQKQFKVLLSYK-----SDEHQVLTLGTGELSWRIIECSMPHILGMSEICINGV 224
Query: 82 IFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXXXXX 141
+++ ++ G +++ FDV+ E FR I + LI G+
Sbjct: 225 LYYP---AINLSSGDYIIVCFDVRSEKFRFITVMEEFIKAAHDGTLINYNGKLASLVSER 281
Query: 142 ------XXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQ 195
+ + W+KH + P++ + N G T EI+++P
Sbjct: 282 YCFVDGRSKSIELWVLQDAEKKEWSKHTYVLPAWWQHRIGTLNLRFVGVTRTNEIMLSPC 341
Query: 196 CLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENI 243
+ PF VYYF++ R + V I G+ + + + L ++VEN+
Sbjct: 342 YQTVPFDVYYFNIERKTMMSVAIQGMEAFQGHLVFTYL----DHVENV 385
>AT3G23960.1 | Symbols: | F-box family protein |
chr3:8657736-8658944 FORWARD
Length = 402
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 24/254 (9%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRK-PSTE-YRVFTLGTK 58
++TLP K++++ Y +F+G+DP KQYKVL+ Y K P E Y+V TLGT
Sbjct: 159 SLTLP----KTNMTRKKIYTVTSFLGYDPIEKQYKVLSMNMSYEKHPKCEGYQVLTLGTG 214
Query: 59 E--WRPLQSGPPFYA--QRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHL 114
+ WR ++ + + ICI+GV+++ + V+ + AV + FD++ E F + +
Sbjct: 215 KLSWRMIKCCLNYQHPLKNSEICINGVLYYLAMVNGSSWPTRAV-VCFDIRSEMFNFMEV 273
Query: 115 PRGAP-----TDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSY 169
R + L L G+ W+KH + P
Sbjct: 274 YRELSYTTTLINYNNGKLGMLMGQEAHKTISGICRSFELWVLEDTVKHEWSKHVYLLPPL 333
Query: 170 LKKTETGQNFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDL 229
K AG + T EI++ P V+Y+++ R+ I+RV I GL + F +
Sbjct: 334 WKDAVANTRLYFAGMIGTSEIVLFRP--DEPLCVFYYNIDRNTIKRVGIRGLEAFKYFRI 391
Query: 230 SSNLVSITNYVENI 243
N+VEN+
Sbjct: 392 ------FLNHVENV 399
>AT5G42430.1 | Symbols: | F-box family protein |
chr5:16971312-16972499 REVERSE
Length = 395
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPFY-AQRESICID 79
+F FDP KQ+KVL + + + + TLGT++ WR +Q P + E ICI+
Sbjct: 147 SFFLFDPVGKQFKVLLMNKINNNETKDIHILTLGTRKVRWRKIQQCPLIHIVSHEWICIN 206
Query: 80 GVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXXX 139
G +++ ++ D+ + ++ FDV+ E F+ ++L + ++ T LI G+
Sbjct: 207 GALYY---IAYNIDDFLGYIVCFDVRSEKFKCLNLNQDCFSERSTK-LIYYKGKLGVVNL 262
Query: 140 XXXX-----XXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAP 194
+ + WT + + + + G T EI++A
Sbjct: 263 KYAHGGGFPLKLCMWVLEDVEKQEWTTSVYTLRDEDRVVKVYYDLFIVGITATGEIVLAK 322
Query: 195 QCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENI 243
+ + PFYV+YF+L R+ + V+I G EY S ++ + ++VE++
Sbjct: 323 KKVCKPFYVFYFNLERNTLLSVEIQGFGEYQS---CCSVHAFVDHVEDL 368
>AT1G53790.1 | Symbols: | F-box family protein |
chr1:20079694-20081394 REVERSE
Length = 444
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 19/247 (7%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPST--EYRVFTL--G 56
+++LP + KS + + Y +G+DP KQ KVL + P+T E++V TL G
Sbjct: 208 SVSLPKVELKSINTETRPY-----LGYDPVRKQLKVL-CIKSDDIPNTCDEHQVLTLENG 261
Query: 57 TKEWRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPR 116
WR +Q P Y + + ICIDG++++ + +R V++++ FDV+ E F I++
Sbjct: 262 NHLWRTIQCKP-HYPKSDGICIDGILYYTAGFDMRA--RVSMVVCFDVRSEKFSFINIHV 318
Query: 117 GAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXX-XXXXXQNEIWTKHYIIFPSYLKKTET 175
+ ++ LI G+ + IWTK P
Sbjct: 319 FMLMN-DSCTLINYKGKLGALQFTCLSPKRLRFWVLVNAEKNIWTKCIYALPPLWNNLVQ 377
Query: 176 GQNFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVS 235
+ G D E++++ CL FY+YYF+L + RV+I + + + ++L
Sbjct: 378 HTELAIVGMTDGGEVVLSQYCLIYAFYIYYFNLESKSLTRVQIQDVEMFKRTRVYTSL-- 435
Query: 236 ITNYVEN 242
YVEN
Sbjct: 436 --GYVEN 440
>AT1G53790.2 | Symbols: | F-box family protein |
chr1:20079558-20081394 REVERSE
Length = 461
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 19/247 (7%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPST--EYRVFTL--G 56
+++LP + KS + + Y +G+DP KQ KVL + P+T E++V TL G
Sbjct: 208 SVSLPKVELKSINTETRPY-----LGYDPVRKQLKVL-CIKSDDIPNTCDEHQVLTLENG 261
Query: 57 TKEWRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPR 116
WR +Q P Y + + ICIDG++++ + +R V++++ FDV+ E F I++
Sbjct: 262 NHLWRTIQCKP-HYPKSDGICIDGILYYTAGFDMRAR--VSMVVCFDVRSEKFSFINIHV 318
Query: 117 GAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXX-XXXXXQNEIWTKHYIIFPSYLKKTET 175
+ ++ LI G+ + IWTK P
Sbjct: 319 FMLMN-DSCTLINYKGKLGALQFTCLSPKRLRFWVLVNAEKNIWTKCIYALPPLWNNLVQ 377
Query: 176 GQNFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVS 235
+ G D E++++ CL FY+YYF+L + RV+I + + + ++L
Sbjct: 378 HTELAIVGMTDGGEVVLSQYCLIYAFYIYYFNLESKSLTRVQIQDVEMFKRTRVYTSL-- 435
Query: 236 ITNYVEN 242
YVEN
Sbjct: 436 --GYVEN 440
>AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE
Length = 420
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 24 FMGFDPSNKQYKVL-----NSWRHYRKPSTEYRVFTLGTK-EWRPLQSGPPFYAQRESIC 77
F+G DP QYKV+ +S + +E+ VF L W+ ++ P R +C
Sbjct: 190 FLGHDPVLDQYKVVCTFVSSSSQDLETIISEHWVFVLEVGGSWKRIEFDQPHTPTRSGLC 249
Query: 78 IDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXX 137
I GVI++ ++ S+ D +++ FDV+ E F +I P V++ I G+
Sbjct: 250 IGGVIYYLAFTSMFQD----IVVTFDVRSEEFNIIQAPLVLSAYVDSLDFIEYGGKPAIF 305
Query: 138 XXXXXXXXXXXXXXXXXQNEIWTKHYI-IFPSYLKKTETGQNFIVAGSLDTEEIIMAPQC 196
W++ + + P L + + + E+++ P
Sbjct: 306 YHTSLKENGLVDLWVLENAGNWSRTVLSLQPCQLHLVDNDIPLTLVDTTQNGEVVLVPSD 365
Query: 197 LSTPFYVYYFDLARSKIRRVKILGLPEY 224
L +PFY+ Y+D+ ++ +R+V+I +P++
Sbjct: 366 LCSPFYILYYDIQKNHLRKVEIQAMPDH 393
>AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 399
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 23/243 (9%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVL---NSWRHYRKPSTEYRVFTL-G 56
I LP + S + ST C+ G+DP + Q+K L +S + + E+ V TL G
Sbjct: 138 VIVLPILPSGRAPDMRST--CI---GYDPVDDQFKALALISSCIPNKDSTVEHLVLTLKG 192
Query: 57 TKE---WRPLQSG---PPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFR 110
K+ WR +Q PP+ +CI+GV+++ +W ++ AV++ FDV+ E
Sbjct: 193 DKKNYSWRQIQGNNNIPPYSPVTMRVCINGVVYYGAWTPRQSMN--AVIVCFDVRSEKIT 250
Query: 111 VIHLPRGAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXX--XXXXXQNEIWTKHYIIFPS 168
I P+ S L+ G+ + + W+K P
Sbjct: 251 FIKTPKDVVRWCNDSILMEYKGKLASIVRNRYSRFDTFDLWVLEDIEKQEWSKQTCEIPL 310
Query: 169 YLKKTETGQNFIVAGSLDTEEIIMAPQCLST----PFYVYYFDLARSKIRRVKILGLPEY 224
+ + N G EII+AP CLS FY++Y+ + KIRRV++ G+ +
Sbjct: 311 SVWDSVENFNMSFPGINKFGEIILAPTCLSGYHLRSFYIFYYHVETKKIRRVRLEGIADD 370
Query: 225 DSF 227
++F
Sbjct: 371 ENF 373
>AT1G47800.1 | Symbols: | F-box family protein |
chr1:17601513-17602676 FORWARD
Length = 387
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 28/224 (12%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE- 59
+ITLP I + +S S F+G+DP N QYKVL R E++V TLG +
Sbjct: 182 SITLPTIKTSGIISQS-------FLGYDPINAQYKVLCLTNVTR--FCEHQVLTLGAQNS 232
Query: 60 -WRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVI-HLPRG 117
WR +Q P Y +S+CIDG++++ ++ S T VL+ FDV+ E+ V P G
Sbjct: 233 SWRMIQCSTPHYCGEKSLCIDGILYYSAFTSFTT-----VLVRFDVRAESLEVASKFPEG 287
Query: 118 APTDVETSYLIRLAGRXXXXXXXXXXXXXXXX--XXXXXQNEIWTKHYIIFPSYLKKTET 175
+ + LI G+ + + W+ + F + + T
Sbjct: 288 LKSSNGIT-LINYHGKVAVVSKNYHNDHHDFNLWVLEDTKKQQWSNVLVSFHTGV----T 342
Query: 176 GQ---NFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRV 216
GQ V G+ D EI+ AP F VY+ D ++IR V
Sbjct: 343 GQFHGGLEVLGTSDMGEIVFAPNHFEE-FVVYFLDQKSNRIRSV 385
>AT3G49450.1 | Symbols: | F-box family protein |
chr3:18337305-18338498 REVERSE
Length = 397
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 16/229 (6%)
Query: 22 VNFMGFDPSNKQYKVLN---SWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPFYAQ-RES 75
+ ++G++P KQYKVL + ++ + E++V TLGT + WR L+ Y S
Sbjct: 174 ITYIGYNPIEKQYKVLCMTIREKPFKFKAEEHQVLTLGTGKLKWRMLECSVDHYPYYHGS 233
Query: 76 ICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAG-RX 134
ICI+GV+F+ ++++++ + ++F ++ E F I P +Y RL G R
Sbjct: 234 ICINGVLFY---LAMKSESKEYMTVSFHMKDENFMFI--PNQDLLSTLINYKGRLGGIRH 288
Query: 135 XXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAP 194
N+ W + + P K G + + E++ +P
Sbjct: 289 KSFGFMDGGDVGFELWILDVVNQEWIRSIHVLPPMWKDVVGETRVYFVGIIGSCEVVFSP 348
Query: 195 QCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENI 243
S PFY+++ D+ + I RV+I G + + + N++EN+
Sbjct: 349 FVKSNPFYIFHLDMKSNSITRVEIKGTGPLE----GQAVYTFVNHIENV 393
>AT5G62660.1 | Symbols: | F-box family protein |
chr5:25156326-25157465 REVERSE
Length = 379
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 14/218 (6%)
Query: 1 AITLPYICSKSSLSASSTYF--CVNFMGFDPSNKQYKVLNSW----RHYRKPSTEYRVFT 54
++TLP + KS++ A +++ + F G+DP QYKV+ + + ++ ++E+ VF
Sbjct: 166 SVTLPAV--KSNILAQKSHWNSLLYFFGYDPVLDQYKVVCTVALFSKRLKRITSEHWVFV 223
Query: 55 LG-TKEWRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIH 113
L W+ ++ P R +C++GVI++ + R D ++++FDV+ E F +I
Sbjct: 224 LEPGGSWKRIEFDQPHLPTRLGLCVNGVIYYLASTWKRRD----IVVSFDVRSEEFSMIQ 279
Query: 114 LPRGAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIF-PSYLKK 172
P E+ I G+ W++ ++ P +
Sbjct: 280 GPLKVSAFSESVGFIEYGGKPAVFDYTMMKQTGLVDLWVLEDAGKWSRKSLVLQPCQMHL 339
Query: 173 TETGQNFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLAR 210
+ F V G+ E+I+AP+ + +P+Y+ + R
Sbjct: 340 VDNDIEFNVEGTTQNGEVILAPETIISPYYILFMTSKR 377
>AT3G57590.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Cyclin-like F-box
(InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT3G57580.1); Has
891 Blast hits to 856 proteins in 41 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 889;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr3:21330182-21331396 REVERSE
Length = 404
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPFYAQ--RESICI 78
F+GFDP KQ+KVL+ + + + TLGT+E WR P Y + E ICI
Sbjct: 141 GFLGFDPIGKQFKVLSEAYPFSDQREHHEILTLGTEELSWRSNIISCPAYDRSLSEGICI 200
Query: 79 DGVIFFRSWVSLRTDEGV--AVLIAFDVQKETFRVIHLPRGAPTDV--ETSYLI------ 128
+GV+++ L GV V+I FDV+ E F+ + G D +TS LI
Sbjct: 201 NGVLYY-----LAQTLGVPSCVIICFDVRSEEFK--YFDAGCFNDQLDDTSGLILVNYEG 253
Query: 129 RLAG---RXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSL 185
+L+G + ++E W K+ P + +F VAG
Sbjct: 254 KLSGINWKYGQAGERRTVELRMWVLEDAEKHE-WVKYVYTLPE--NEVLDSCDFSVAGVT 310
Query: 186 DTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITN 238
+I++ + PFYV+YF+ R+ ++ V+I D +NL ++ N
Sbjct: 311 TRGDIVLCMKYTCKPFYVFYFNPERNTLQSVEIQ--------DFGANLEAVEN 355
>AT1G30920.1 | Symbols: | F-box family protein |
chr1:11004242-11005444 REVERSE
Length = 400
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 24 FMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLG--TKEWRPLQSGPPFYAQRE-SICIDG 80
F+GFDP +KQ+KVL + K T++ + TLG T WR +QS + +ICI+G
Sbjct: 159 FLGFDPIDKQFKVLIPIFDFDKHQTDHHILTLGAETVGWRKIQSPLRYLPHSNGTICING 218
Query: 81 VIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXXXX 140
++++ + ++ D+ VL+ FDV+ E F + L T ++ L+ G+
Sbjct: 219 ILYYLAKINYAMDKN--VLVCFDVRSENFVFLRL----NTYCSSTKLVNYKGKLGMINQE 272
Query: 141 XXX-----XXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQ 195
E W+ + K + N V G + EI++ +
Sbjct: 273 YVDDGGFPLKLSVWVLEDVGKEEWSTYVYTLRDDNKVDQVKYNLSVVGVTASGEIVLVKK 332
Query: 196 CLS-TPFYVYYFDLARSKIRRVKILGL 221
+ PFYV YF+ ++ + V++ GL
Sbjct: 333 TQTLKPFYVLYFNPDKNTLLTVEVKGL 359
>AT1G30930.1 | Symbols: | F-box family protein |
chr1:11014783-11015913 REVERSE
Length = 376
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 23 NFMGFDPSNKQYKVLNSWRHY-RKPSTEYRVFTLGTKE--WRPLQ---SGPPFYAQRESI 76
+++GFDP +K++KVL Y ++ + TL T E WR +Q + P + + I
Sbjct: 148 SYLGFDPVDKEFKVLFMASGYTASKDVDHYILTLRTGELKWRTIQCPFTHEPLWTR---I 204
Query: 77 CIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAG-RXX 135
CI+GV+++ S +G V++ FDV+ E F+++ + + +Y +L G +
Sbjct: 205 CINGVLYY----SAMNSDGNYVIVCFDVRYEKFKLVDTKCRSEFNGLINYKGKLCGVKLK 260
Query: 136 XXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQ 195
+ + W+ + K + QN VAG T +I++ +
Sbjct: 261 YAYRVGFPVKLRMRVLEDVEKDEWSTYV--------KVKVKQNLSVAGMTATGDIVLFMK 312
Query: 196 CLSTPFYVYYFDLARS--KIRRVKILGL 221
S PFYV+YF+ R+ +++ V+I GL
Sbjct: 313 FASNPFYVFYFNPERNSLEVQSVEIQGL 340
>AT1G53550.1 | Symbols: | F-box family protein |
chr1:19983411-19984637 FORWARD
Length = 408
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 26 GFDPSNKQYKVLN-SWRHY--RKPSTEYRVFTL--GTKEWRPLQSGPPFYAQRES-ICID 79
G+DP +KQ+KVL +W H + S+EY+V TL G WR Q Y +S ICI+
Sbjct: 182 GYDPIDKQFKVLRITWLHRGSHEWSSEYQVLTLGFGNISWRNTQCCVVHYLLEDSGICIN 241
Query: 80 GVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSY-LIRLAGRXXXXX 138
GV+++ + R D ++ FDV E F + + S+ LI G+
Sbjct: 242 GVLYYPA----RLDNRKYTIVCFDVMTEKFSFTSIDKDMTIMTNLSFSLIDYKGK--LGA 295
Query: 139 XXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQCLS 198
+ W+K+ P + E AG + + EI++ P +
Sbjct: 296 CICDHTLFELWVLENAEEHKWSKNIYNMPYSRSRLEETSYLKCAGMIASGEILLYPISSA 355
Query: 199 T-------PFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENI 243
PF +YY++L R+ I RV L +P F + + +N++EN+
Sbjct: 356 NTSTDARYPF-IYYYNLERNIITRVT-LQVPILKQFTYARLFYTFSNFLENV 405
>AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 396
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 24 FMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGT--KEWRPLQSGPP------FYAQRES 75
F+G+DP ++K++ R S E RV TLG+ ++WR ++S +Y Q
Sbjct: 170 FLGYDPVEGKHKLMCMNRD--NTSDECRVLTLGSAQEKWRRIKSNLKHRSILRYYGQ--- 224
Query: 76 ICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXX 135
CI+GVI++++++ +++F+V+ E F I LP G+ ++ Y RLA
Sbjct: 225 -CINGVIYYQAYIDQMGFISNPTIMSFEVRSEKFDTITLPSGSFANMLIPYQGRLA--CV 281
Query: 136 XXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQ 195
+ IW+ + P +F + G E I
Sbjct: 282 NNTMDDVNGGITLWTLEDAEKHIWSCKLFLAPLAHYDRSLKTDFKLDGITHAGEFIYVLS 341
Query: 196 CLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNL 233
FYV YFD ++ R+V+ G Y+ F LS L
Sbjct: 342 TFLKSFYVLYFDPKKNSFRKVEFRG-TAYEVFRLSHGL 378
>AT1G53360.1 | Symbols: | F-box family protein-related |
chr1:19907517-19908548 FORWARD
Length = 343
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 38/253 (15%)
Query: 2 ITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVL-NSWRHYRKPSTEYRVFTL--GTK 58
ITLP + + +YF GFDP KQ+KVL +W Y P+T ++V TL G +
Sbjct: 113 ITLPKV---KATGVGESYF-----GFDPITKQFKVLCMTWSRYGTPNT-HQVLTLETGKR 163
Query: 59 EWRPLQSG-PPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLP-- 115
WR +Q P Y + ICI+GV+++ + + + ++ FD + E F I++
Sbjct: 164 LWRTIQDPILPHYRSFDRICINGVLYYGADFE---ESQSSKIVCFDFRFEKFSFINIADE 220
Query: 116 ---RGAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKK 172
RG+ +Y +L +N W+K I P +
Sbjct: 221 GMFRGSYKWTLFNYKGKLGAH-----QYSRNGELVLWVLEDAENHKWSKSICILPPIV-- 273
Query: 173 TETGQNFIVAGSLDTEEIIMAPQC--LSTPFYVYYFDLARSKIRRVKILGLPEYD-SFDL 229
N + G T EI+ +P + +PFY++++++ RV + G E+ +F L
Sbjct: 274 ----HNSRIVGVTGTGEIVFSPYACYMPSPFYIFFYNIQTKTCTRVHVKGFEEFKHNFTL 329
Query: 230 SSNLVSITNYVEN 242
L + ++VE+
Sbjct: 330 ---LHTFLDFVED 339
>AT1G33020.1 | Symbols: | F-box family protein |
chr1:11962746-11964832 FORWARD
Length = 548
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTL--GTKEWRPLQ---SGPPFYAQRESIC 77
+F+GFDP +KQ+KVL ++ + + + TL G WR ++ + PF+ E IC
Sbjct: 155 SFLGFDPIDKQFKVLR-MKYNDRGIVVHHILTLEPGKMRWRKIRCPLAHEPFW---EEIC 210
Query: 78 IDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVE-TSYLIRLAGRXXX 136
+GV+++ ++ TD G V+ FDV+ E F+ I ++ +Y +L G
Sbjct: 211 ANGVLYY---LAEPTDGGSYVICCFDVRSEKFKFIDAKCFGDFSIQLINYKGKLGGISWK 267
Query: 137 XXXXXXXXXXXXXX--XXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAP 194
+ + W+K+ P ++ VAG +I+
Sbjct: 268 YDTVDGKRTVELYMWVLEDVEKQKWSKYVYPLPG------NSYHYSVAGVTAKGDIVFVK 321
Query: 195 QCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENI 243
S PFYV+Y + + +RV+I G ++ FD ++ + + ++VE++
Sbjct: 322 TYTSKPFYVFYVNPEKKTFQRVEIHG--NHEVFDTNNLVYAFVDHVEDL 368
>AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 389
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 13/212 (6%)
Query: 24 FMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGT--KEWRPLQSGPPFYAQ--RESICID 79
F+G+DP ++KV+ + RV TLG+ K WR +++ + CI+
Sbjct: 167 FLGYDPVEGKHKVM--CMEFSATYDTCRVLTLGSAQKLWRTVKTHNKHRSDYYDSGRCIN 224
Query: 80 GVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXXX 139
GV++ ++V D V VL++FDV+ E F +I LP +DV LI GR
Sbjct: 225 GVVYHIAYVK---DMCVWVLMSFDVRSEIFDMIELP---SSDVHKDVLIDYNGRLACVGR 278
Query: 140 XXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQCLST 199
N+ +K ++ ++ K+ + F++ G EII
Sbjct: 279 EIIEKNGIRLWILEKHNKWSSKDFLAPLVHIDKSLSTNKFLLKGFTHAGEIIYVESMFHK 338
Query: 200 PFYVYYFDLARSKIRRVKILGLPEYDSFDLSS 231
++++D R+ RR ++ G + D F LS+
Sbjct: 339 SAKIFFYDPVRNTSRRFELKGFTD-DEFVLSN 369
>AT1G47730.1 | Symbols: | F-box family protein |
chr1:17563931-17565106 REVERSE
Length = 391
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 22/219 (10%)
Query: 25 MGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGT-KEWRPLQSG---PPF-----YAQRES 75
+G+DP + ++KV+ Y E RV TLG+ +EWR +++ PF R+S
Sbjct: 164 LGYDPVDGKHKVV--CMPYGNAFYECRVLTLGSDQEWRTVKTNHKNSPFTFHGGVCYRQS 221
Query: 76 ICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXX 135
CI+GVI++R+ T+ G V+++FDV+ E F VI LP + ++ GR
Sbjct: 222 RCINGVIYYRA----DTNSG-RVILSFDVRSERFDVIELPWDE--NFGLVMMMSYKGRLA 274
Query: 136 XXXXXXXXXXXXXXXXXXXQNEIWTKH-YIIFPSYLKKTETGQNFIVAGSLDTEEIIMAP 194
+ W+ H Y+ Y E F + G + E+I P
Sbjct: 275 CLGFNHEKNSRSMWVLENVEQREWSCHTYLPISHYEPGLE--NYFNLTGITNDGELIYVP 332
Query: 195 QCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNL 233
+ F+V YFD R RRV G+ + F L + L
Sbjct: 333 NTVLERFHVIYFDAIRETFRRVIYKGVAD-KGFRLRNGL 370
>AT5G52620.1 | Symbols: | F-box family protein |
chr5:21348554-21349681 REVERSE
Length = 375
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 4 LPYICSKSS------LSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGT 57
+P IC+ S+ SS + +G+DP K+YKV+ + P + TLGT
Sbjct: 124 VPVICNPSTGQYARLTQRSSMNNLSSLLGYDPIGKKYKVITPSSSHFDPEN---ILTLGT 180
Query: 58 KE--WRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLP 115
+ WR ++ Y + E ICI+GV+++ + + GV + +F+V+ ET + ++
Sbjct: 181 GKVAWRSIRCLVDHYPESEGICINGVLYYMASNKFQFS-GVKI-ASFNVRYETLKFLN-- 236
Query: 116 RGAPTDVETSY------LIRLAGRXXXXX-----------XXXXXXXXXXXXXXXXQNEI 158
DV+ ++ LI G+ + E
Sbjct: 237 ----ADVDVTFCPALAKLINYKGKLCVLSCLWDNQIYPKPLRWKVLMLWLWVLEDAEKEE 292
Query: 159 WTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKI 218
W K P + N V G T EII++ S F+VYYF+ R+ + +V+I
Sbjct: 293 WLKREYTLPVNI----VHGNVSVVGVTATGEIILSMDYTSESFFVYYFNPERNTLEKVEI 348
Query: 219 LGLPEYDSFDLSSNLVSITNYVENI 243
G E +LSS + + +Y E++
Sbjct: 349 QGF-EGSEKNLSSRVYTFVDYAEDV 372
>AT3G61340.1 | Symbols: | F-box family protein |
chr3:22701215-22702447 REVERSE
Length = 410
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 39/261 (14%)
Query: 1 AITLPYICSKSSLSA-------SSTYFCVNFMGFDPSNKQYKVLNSWRHY--RKPSTEYR 51
+T P IC+ S+ + + ++F+GFDP +K +KVL R R S E++
Sbjct: 133 TVTEPLICNPSTGESVVLRKVKTRRKGVISFLGFDPIDKNFKVLCMTRSCIGRADSEEHQ 192
Query: 52 VFTL--GTKEWR------------PLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVA 97
V TL G K R P++ F +Q + +CI+GV+++ + V +D+
Sbjct: 193 VHTLETGKKPSRKMIECDILHYPVPVEHTNGF-SQYDGVCINGVLYYLAIVHGVSDDRYP 251
Query: 98 VLIAFDVQKETFRVIHLPRGAPTDVETSYLIR------------LAGRXXXXXXXXXXXX 145
++ F+ + F+ I + A D+E YL R LA
Sbjct: 252 DVVCFEFGSDKFKYIK--KVAGHDMEILYLGRRLNSILVNYKGKLAKLQPNMPNNVCTGI 309
Query: 146 XXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQCLSTPFYVYY 205
++E W+ H + P + G+ EI+++P +S FY+ Y
Sbjct: 310 QLWVLEDAEKHE-WSSHIYVLPPPWRNVYEETKLCFVGTTRKGEIVLSPNTISDFFYLLY 368
Query: 206 FDLARSKIRRVKILGLPEYDS 226
++ R+ I VKI G+ + S
Sbjct: 369 YNPDRNTITIVKIKGMETFQS 389
>AT1G31000.1 | Symbols: | F-box family protein |
chr1:11053377-11054561 REVERSE
Length = 363
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 55/276 (19%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRK----PSTEYRVFTLG 56
+I LP + S+S + S F G+DP QYKVL PS+E++VFTLG
Sbjct: 113 SIYLPKVKSRSKIIQS-------FFGYDPVYGQYKVLCMSERMNDYLNVPSSEHQVFTLG 165
Query: 57 -----TKEWRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRV 111
+ WR ++ + S+C+DGV+++ ++ D L+ FDV+ E +
Sbjct: 166 GVQKVEQSWRMIECNIHHRPKTNSVCMDGVLYYGAFTG--GDMLEWCLMRFDVRTEKLDL 223
Query: 112 I----------HLPRGAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTK 161
+ + P +P+ LI+ G+ E W+K
Sbjct: 224 VSRLNESSIQCYRPGHSPS------LIKYHGKVALAFETSLHTFELWVME---DAEKWSK 274
Query: 162 --HYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQCLSTPF---YVYYFDLARSKIRRV 216
I +L + F++ G++ T EII AP F +V Y+DL +++R
Sbjct: 275 IRFSICHSMHLFGQDDDDAFLITGNIHTGEIIFAPYDCDVRFGMTHVVYYDLKTNRLRFR 334
Query: 217 KILGLPEYDSFDLS------SNLVSITNYVENILPL 246
+ +FDL S +V +YVE+ + L
Sbjct: 335 TV-------AFDLGTLFPQISVMVPFFDYVESAMLL 363
>AT4G38870.1 | Symbols: | F-box family protein |
chr4:18132583-18133863 REVERSE
Length = 426
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 18/124 (14%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKV------LNSWRHYRKPSTEYRVFT 54
+ITLP I K+ A + Y +G+DP + YKV + R+ R + E +V T
Sbjct: 180 SITLPKI--KAGRRAINQY-----IGYDPLDGNYKVVCITRGMPMLRNRRGLAEEIQVLT 232
Query: 55 LGTKE--WRPLQSG-PPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRV 111
LGT++ WR + PP E +CI+GV+++R+++ + +E + +++FDV+ E F +
Sbjct: 233 LGTRDSSWRMIHDIIPPHSPVSEELCINGVLYYRAFIGTKLNE--SAIMSFDVRSEKFDL 290
Query: 112 IHLP 115
I +P
Sbjct: 291 IKVP 294
>AT5G52610.1 | Symbols: | F-box family protein |
chr5:21346423-21347478 REVERSE
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 21/232 (9%)
Query: 24 FMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTL-GTKEWRPLQSGPPFYAQRESICIDGVI 82
+MG+DP N QYKVL + Y + VFTL G W+ ++ ICIDGV+
Sbjct: 132 YMGYDPINYQYKVLFFSKQYLLSPYKLEVFTLEGQGSWKMIEVENIPSPSTRGICIDGVV 191
Query: 83 FFRSWVSLRTDEGVAVLIAFDVQKETF-RVIHLPRGAPT--DVETSY--LIRLAGRXXXX 137
++ + +T G+ L+ F V E F I +P GA D+ Y L+ G+
Sbjct: 192 YYGA----QTAHGLR-LVRFYVATEKFGDFIEIPVGASNVYDMNFGYSKLVNYQGKLALL 246
Query: 138 XXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTE---TGQNFIVAGSLDTEEIIMAP 194
+ E W+K I+ + + G VAGS +E+I+
Sbjct: 247 AAKSMSMYDLWVLEDAGKQE-WSKVSIVLTREMFSYDLVWLGAVGFVAGS---DELIVTA 302
Query: 195 QCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENILPL 246
Y+ Y DL + R V + G+ D SS +++ T+YVE+I+ L
Sbjct: 303 HDRFYQIYLVYVDLKMKRSREVWLGGI---RCSDRSSLVLTFTDYVESIMLL 351
>AT4G13060.1 | Symbols: | F-box family protein-related |
chr4:7619935-7620942 REVERSE
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 103/253 (40%), Gaps = 35/253 (13%)
Query: 24 FMGFDPSNKQYKVLNS------WRHYRKPSTEYRVFTLGTKE-WRPLQSGPPFYAQRESI 76
++G+DP YK+L+ W Y+KP + TLG++E WR +++ P
Sbjct: 84 YLGYDPKENTYKLLSVANLNTLWDDYQKP----HILTLGSQESWRVIKNSPDHKPTSRYY 139
Query: 77 CIDGVIFFRSWVSLRTDE---------------GVAV---LIAFDVQKETFRVIHLPRGA 118
CI+GV+++ +++S GV V +++FDV+ E F+ I +P
Sbjct: 140 CINGVVYYNAYISSEEHRRGHNTVPAFTKEFELGVRVKHIIMSFDVRSEKFKSIQIPSSG 199
Query: 119 PTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQN 178
Y ++ + + W+++ + PS ++ G
Sbjct: 200 HQYELMCYKSLMSYKGKLAWVCCNSNIIKLWVLLDAGKQEWSENEFVLPSLPQRDLLGSA 259
Query: 179 FIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYD-----SFDLSSNL 233
+ +G+ T E I +Y+D R I VK L E+ S D + L
Sbjct: 260 RL-SGATSTGEFIYVSGKHFKDISAFYYDPVRKTITSVKGLYYEEFRCCYGFSNDEMACL 318
Query: 234 VSITNYVENILPL 246
S N++E+++ L
Sbjct: 319 RSYPNHIESLMSL 331
>AT2G02660.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s: F-box
associated type 3 (InterPro:IPR013187), F-box associated
type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein
(TAIR:AT2G02890.1); Has 533 Blast hits to 502 proteins
in 27 species: Archae - 0; Bacteria - 0; Metazoa - 2;
Fungi - 0; Plants - 531; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr2:738504-739769 FORWARD
Length = 421
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 34/246 (13%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPFYA-QRESICID 79
+F GFDP KQYK L+ Y +++ TLG + WR ++ P + + ICI+
Sbjct: 147 SFFGFDPIGKQYKALSI--AYPSDPGRHKILTLGDGDLTWRKIKCPVPRPGIKGDGICIN 204
Query: 80 GVIFFRSWVSLRTD-EGVAVLIAFDVQKETFRVIHLPRGA--------------PTDVET 124
GV++F ++ R + E V++ FDV+ E F I + R DV+
Sbjct: 205 GVLYF---LAERNELESDYVIVCFDVRSEKFTYIDVERICRLINYKGKLAMIYWEDDVDI 261
Query: 125 SYLIRLAGRXXXXXXXXXXXXXXXXXXX-----XXQNEIWTKHYIIFPSYLKKTETGQNF 179
+ +AG+ + + W+K+ ++ T ++
Sbjct: 262 YEINHMAGKNLDKYLEENLDVDATNELHVWVLEDVEKQEWSKYAY---TWTDDTFFRRHL 318
Query: 180 IVAGSLDTEEIIMAPQCLST--PFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSIT 237
+AG+ + EI+ + + ++ PFYV+YF+ + ++RV+ G E + S + +
Sbjct: 319 SIAGATVSGEIVFSIRKYTSKQPFYVFYFNPESNTLQRVETQGFGEAFKAETCS-VRTFV 377
Query: 238 NYVENI 243
N+VEN+
Sbjct: 378 NHVENL 383
>AT1G47350.1 | Symbols: | F-box family protein-related |
chr1:17358447-17360722 REVERSE
Length = 528
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 21/229 (9%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPFYAQRESICIDG 80
+F G+DP +KQ+KVL Y ++V LG+ E WR L+ E ICI+G
Sbjct: 226 SFFGYDPIDKQFKVLFMIMAYPCSPDHHKVLKLGSGEMSWRRLKRTLRHEIMSEGICING 285
Query: 81 VIFFRSWVSLRTDEGVA--VLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXX 138
V+++ T E + V++ FDV+ ETF ++ G+ ++ +Y +L
Sbjct: 286 VVYYLG----DTSEVLTSFVVVCFDVRYETFSFLY--PGSYCEL-INYKGKLGLVFYDDY 338
Query: 139 XXXXXXXXXXXXXXXXQNEIWTKH-YIIFPSYLKKTETGQNFIVAGSLDTEEII--MAPQ 195
+NE W+K+ Y+++ V G T EI+ MA
Sbjct: 339 DGDTIKLRLWVLEDEEKNE-WSKYAYVLWDDIF----LAHYVSVVGVTATGEIVLSMADY 393
Query: 196 CLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENIL 244
PFY++Y++ + ++ V+I G EY + S N + +V+N+
Sbjct: 394 TSKQPFYIFYYNPEMNTLQCVEIRGFGEY--HEASGNRSRVCVFVDNVF 440
>AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 390
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 34/217 (15%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPST----EYRVFTLGT-KEWRPLQSGP----PFYAQR 73
N+ G DP + +YKVL+ + K T E++V LG WR +S PF+
Sbjct: 163 NWFGHDPFHDEYKVLSLFWEVTKEQTVVRSEHQVLVLGVGASWRNTKSHHTPHRPFHPYS 222
Query: 74 ESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLP---------RGAPTDVET 124
+ IDGV+++ S RTD VL++FD+ E F +I LP V T
Sbjct: 223 RGMTIDGVLYY----SARTDANRCVLMSFDLSSEEFNLIELPFENWSRTIHMNYQGKVAT 278
Query: 125 SYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGS 184
+RLA +++ K + P G +V S
Sbjct: 279 CQYMRLAS---------DGFVDVCVLEDADKSQWSNKKTFVLPISQMNFVHGDRLVVGAS 329
Query: 185 LDTEEIIMAPQCLSTPFYVYYF--DLARSKI-RRVKI 218
D+ +++M L + +F D+ R++I RR++I
Sbjct: 330 RDSGKVLMRKANLLRNQHARFFLYDMERNEIARRIEI 366
>AT5G15660.1 | Symbols: | F-box family protein |
chr5:5095652-5097041 FORWARD
Length = 438
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 27/229 (11%)
Query: 2 ITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWR----HYRKPSTEYRVFTLGT 57
ITLP ++ L ++F G+D + QYKVL H + S++++V+TLG
Sbjct: 149 ITLPRPKTRRKL-------VISFFGYDSVSDQYKVLCMTERLRGHPEEASSQHQVYTLGA 201
Query: 58 KE--WRPLQSGPPFYAQR-ESICIDGVIFFRSWVSLRTDEGV--AVLIAFDVQKETFRVI 112
K+ W+ + P ++CI+GV+++ + +T EG+ L+ FD++ + +
Sbjct: 202 KQKSWKMINCSIPHRPWSWNAVCINGVVYYIA----KTGEGMFRRCLMRFDLKSDNLDLC 257
Query: 113 H-LPRGAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLK 171
LP T + +LI G+ W K+ ++
Sbjct: 258 TILPEEIQTSLHDYFLINYKGKVAIPNQPNFYTYDVWVMNQEGGKIEWLKNI----TFTI 313
Query: 172 KTETG--QNFIVAGSLDTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKI 218
K G + V G+ T E I+AP + FYV++++ + R++++
Sbjct: 314 KPRKGFVRYLFVTGTTHTGEFILAPTSYTDEFYVFHYNPDMNSFRKIRV 362
>AT4G21240.1 | Symbols: | F-box family protein |
chr4:11322411-11323664 FORWARD
Length = 417
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 19 YFCVNFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE-WRPLQSGP-----PFYAQ 72
YF + +G+DP +YKVL S Y + + VFTLG +E WR +Q+ P P
Sbjct: 168 YFIRSCLGYDPVEDKYKVL-SISGYHNGNHDPLVFTLGPQESWRVIQNSPLDIPLPTGGS 226
Query: 73 RESICIDGVIFFRSWVSLRTDEGV---AVLIAFDVQKETFRVIHLPRGAPTDVETSYLIR 129
R CI+G +++ + + + D+ +L++FDV+ E F I P PT ++++
Sbjct: 227 RVGTCINGHVYYEAQIRFKVDDIFNFENILMSFDVRYEKFNTIKKP-ADPT--LRNFMLN 283
Query: 130 LAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFP----SYLKKTETGQNFIVAGSL 185
G+ Q W+ I P + + + +
Sbjct: 284 YQGKLAWFCSDYSSIRFWVLDDGDKQE--WSLKNFILPFPISPEIDPIFECRVMLTGVTH 341
Query: 186 DTEEIIMAPQCLSTPFYVYYFDLARSKIRRVKILGLPE 223
DT E I + F V Y+D RR++ G+ +
Sbjct: 342 DTGEFIFINATMCDAFCVLYYDPKSGSERRIEYEGIGD 379
>AT2G15640.1 | Symbols: | F-box family protein |
chr2:6816792-6818072 REVERSE
Length = 426
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 43/253 (16%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKEWRPLQSGPPFYAQR----ESICI 78
+F GFDP +KQYK L+ + ++ F G +WR + P Y + E ICI
Sbjct: 161 SFFGFDPIDKQYKALSIFYPSGPGHSKILTFGAGHMKWRKINC-PLRYDRHDIKSEGICI 219
Query: 79 DGVIFFRSWVS--LRTDEGVA---VLIAFDVQKETFRVIHLPRGA--------------- 118
+GV+++ S ++ G+ V++ FD++ E F I + R
Sbjct: 220 NGVLYYLGSTSDCVKDGHGIVSDYVIVCFDIRSEKFTFIDVERFCRLINYKGKLAVIYWE 279
Query: 119 -PTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQ 177
D+ Y + + + W+K+ T T
Sbjct: 280 DDVDIYKLYYSDVDEYVEYNINDDDINELRVWVLEDVKKQQWSKY--------AYTWTDD 331
Query: 178 NFI-----VAGSLDTEEII--MAPQCLSTPFYVYYFDLARSKIRRVKILGLPEYDSFDLS 230
F +AG + EI+ M PFYV+YF+ R+ ++RV+I G E +
Sbjct: 332 RFFRRRVSIAGGTASGEIVFSMLKYTPKQPFYVFYFNPERNTLQRVEIQGFGE--VLKKT 389
Query: 231 SNLVSITNYVENI 243
+ + N+VE++
Sbjct: 390 CRVCTFVNHVEDL 402
>AT1G47340.1 | Symbols: | F-box family protein |
chr1:17354123-17356494 REVERSE
Length = 459
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 22/219 (10%)
Query: 23 NFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPPFYAQRESICIDG 80
+F GFDP KQYKVL + Y + V T GT E WR ++ + ICI+G
Sbjct: 192 SFFGFDPIEKQYKVL--FMAYPSGPDHHTVLTFGTGEMSWRKIECSVKHDIVSDGICING 249
Query: 81 VIFFRSWVSLRTDEGVA--VLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXX 138
V+++ T E + V++ FDV+ ETF I+ G+ +V +Y +L G
Sbjct: 250 VMYYLG----DTSEFMTAFVVVCFDVRSETFSFIY--PGSYCEV-INYKGKL-GLVFCDD 301
Query: 139 XXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFI-VAGSLDTEEII--MAPQ 195
+ W+K + LK + +++ + G EI+ MA
Sbjct: 302 YTDDAIELRLWVLEDKEKIEWSK----YAYKLKDEKFSAHYVSIVGVSAAGEIVLSMADF 357
Query: 196 CLSTPFYVYYFDLARSKIRRVKILGLPEYD-SFDLSSNL 233
PFYV+Y++ R+ ++ +I G E+ +FD S +
Sbjct: 358 TSKQPFYVFYYNPERNTLQCTEIQGFEEHHGTFDRRSRV 396
>AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 11/98 (11%)
Query: 24 FMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGT---KEWRPLQSGPPFYAQRESICIDG 80
F G+DP QYKV+ ++Y + S +VFT+G K WR +Q + ++++CI+G
Sbjct: 172 FFGYDPVENQYKVMVLPKYYMEESP-CQVFTVGDPIEKPWRDIQGIGVHFLLKDAVCING 230
Query: 81 VIFFRSWVSLRTDE--GVAVLIAFDVQKETFRVIHLPR 116
VI++++ T+E L++FDV+ E F + P+
Sbjct: 231 VIYYQA-----TNEYGSTYFLVSFDVRSEKFNHVKAPK 263
>AT1G70380.1 | Symbols: | F-box family protein |
chr1:26526212-26527345 REVERSE
Length = 377
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 24/219 (10%)
Query: 23 NFMGFDPSNKQYKVL----------NSWRHYRKPSTEYRVFTLGTKEWRPLQSGPPFYAQ 72
+F G+D +K +KVL W K +Y+V+T+ + +P P
Sbjct: 147 SFFGYDKVDKVFKVLCVCVPQTQFGAGWT--SKEPKKYQVYTVRSDHEKPSFWRPIICND 204
Query: 73 RESICIDGVIFFRSWV--SLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRL 130
S+ D +F ++ R+ +++ F+V E F VI LP D L+
Sbjct: 205 DHSVVTDEGLFNGGFLYYGARSSCNKPMVMRFNVSSEAFAVIKLPEEVDIDYHWR-LVNY 263
Query: 131 AGRXXXXXXXXXXXXXXXXXXXXXQNEI---WTKHYIIFPSYLKKTETGQNFIV--AGSL 185
G+ +NE+ W K I P + TE+ N+ V G+
Sbjct: 264 KGKVALVNTFDSKFKFNGVFEIWVRNEVDRKWDKDIIKIPQW---TESVDNYNVYFKGTT 320
Query: 186 DTEEIIMAP-QCLSTPFYVYYFDLARSKIRRVKILGLPE 223
T+E++ AP P +V Y+D A + +RR I G+ +
Sbjct: 321 GTKELVFAPPNWFGEPLFVLYYDKATTNLRRFDIEGMDD 359
>AT1G32660.1 | Symbols: | F-box family protein |
chr1:11811040-11812380 FORWARD
Length = 446
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 13/209 (6%)
Query: 24 FMGFDPSNKQYKVL--NSWRHYRKPSTEYRVFTLGTKE-WRPLQSGPPFYAQ--RESICI 78
F+G+DP + QYK L + + + ++V+TLG E R ++ Y ++CI
Sbjct: 198 FVGYDPIDDQYKALGFDFDKRCHGNAIGHKVWTLGGGEGMRQIRGDLAPYRPILLPNVCI 257
Query: 79 DGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXX 138
+GVI++ + +T + V++ FDV+ E I P S LI G+
Sbjct: 258 NGVIYYGAHTLSQTKD--PVIVCFDVRSEKLSFITAPAVVLQSGMKSILIDYKGKLASIV 315
Query: 139 XXXXXXXXXXXXXXXXQN---EIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQ 195
++ W++ FP L G+ EII+AP
Sbjct: 316 RNSCGGCISSFVFWILEDPKKHEWSRQSCDFPYSLWDYVGNVRICFFGTNKAGEIIIAPM 375
Query: 196 CLST---PFYVYYFDLARSKIRRVKILGL 221
LS FY++Y+++ +RRV++ G+
Sbjct: 376 FLSRDVRSFYIFYYNVETKTMRRVRLRGI 404
>AT1G47810.1 | Symbols: | F-box family protein |
chr1:17603504-17604559 FORWARD
Length = 351
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 26/203 (12%)
Query: 1 AITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPSTEY---RVFTLGT 57
+I LP + S ++ S F+G+DP + QYKVL K S ++ +V TLG
Sbjct: 163 SINLPTLGSSETIIGS-------FLGYDPIHAQYKVLC----LNKSSLQFCGHQVLTLGA 211
Query: 58 KE--WRPLQSGPPFYAQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHL- 114
+ WR +Q P Y S+CIDGV+++ + E + L+ FD++ E+ + +
Sbjct: 212 QNCSWRMIQCPTPHYPGTTSVCIDGVLYYSASRGFTMHEPLN-LVRFDLRTESLEIASVF 270
Query: 115 PRGAPTDVETSYLIRLAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTE 174
P + V+ S LI G+ + + W+K I +++
Sbjct: 271 PEDFKSSVKPS-LINYRGKVAVFSKYFCGDFGLWVLEDAKKQQ-WSKEQRI---SIRRGV 325
Query: 175 TG---QNFIVAGSLDTEEIIMAP 194
G Q + G+ D E+I AP
Sbjct: 326 IGRLPQGLQILGTSDMGEVIFAP 348
>AT5G44345.1 | Symbols: | F-box family protein-related |
chr5:17862113-17863079 FORWARD
Length = 181
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 71/200 (35%)
Query: 26 GFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTKE--WRPLQSGPP--FYAQRESICIDGV 81
G+DP KQYKVL + + EY+V TLG E WR ++ P Y + ICI+GV
Sbjct: 45 GYDPVEKQYKVLTWFDGFE----EYQVLTLGIGEPSWRNIKCCRPHLHYPLYKGICINGV 100
Query: 82 IFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSYLIRLAGRXXXXXXXX 141
+++ V+ + +++ FDV+ E FR + E +RL G
Sbjct: 101 LYYVGTVTGLLKD--FMVVCFDVKYENFRFVE---------EGDAYLRLVG--------- 140
Query: 142 XXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEIIMAPQCLSTPF 201
+NEI + C + PF
Sbjct: 141 ----------VTQRNEI---------------------------------VLATCYAVPF 157
Query: 202 YVYYFDLARSKIRRVKILGL 221
Y++Y+++ R I R++I G+
Sbjct: 158 YLFYYNMERKTIIRLQIQGM 177
>AT1G26510.1 | Symbols: | F-box family protein |
chr1:9159906-9162910 REVERSE
Length = 686
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 14/90 (15%)
Query: 2 ITLPYICSKSSLSASSTYFCVNFMGFDPSNKQYKVL----NSWRHYRKPSTEYRVFTLGT 57
ITLP + +K L S F G+DP++ QYKVL + H PS++++VFTLG
Sbjct: 157 ITLPSVRTKRRLVKS-------FFGYDPASDQYKVLCMTERLYGHQEDPSSQHQVFTLGV 209
Query: 58 KE-WRPLQSG--PPFYAQRESICIDGVIFF 84
K+ W+ L P +CIDGV+++
Sbjct: 210 KKPWKMLDRTTIPDHRPWTNGVCIDGVVYY 239
>AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
type 3 (InterPro:IPR013187), F-box associated type 1
(InterPro:IPR017451); BEST Arabidopsis thaliana protein
match is: F-box family protein (TAIR:AT5G52610.1); Has
1084 Blast hits to 1065 proteins in 39 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1084;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:6614162-6615214 REVERSE
Length = 350
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 20/234 (8%)
Query: 20 FCVNFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGTK-EWRPLQSGPPFYA-QRESIC 77
F +MG+DP N QYKVL R + VFT G + WR +++ F++ + +C
Sbjct: 126 FTTWYMGYDPINYQYKVLYLSREHLIAPYIVEVFTFGDEGSWRMIEADENFHSPETRGVC 185
Query: 78 IDGVIFFRSWVSLRTDEGVAVLIAFDVQKETF-RVIHLPRGAPTDVETSY-----LIRLA 131
GV+++ ++ T +G A ++ FDV+ E F + I +P A + Y L+
Sbjct: 186 THGVLYYGAY----TGDG-AKIVRFDVRTEKFGKFIEMPAEA-CSIHGVYLGLYTLLDYQ 239
Query: 132 GRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEEII 191
G+ ++E W+K I + + +V + E+I
Sbjct: 240 GKLGLLATQATSTYDLWVLEDAEKHE-WSKVSIFITREMCPYDLIWPGVVGFVAGSGELI 298
Query: 192 MAPQCLSTPFYVYYFDLARSKIRRVKILGL-PEYDSFDLSSNLVSITNYVENIL 244
+ + F++ Y DL +++ R V + P + S+ +++ T+YVE+I+
Sbjct: 299 VTARDELGQFHILYVDLKKNRSREVWFEEITPSFG----SALVLAFTDYVESIV 348
>AT5G50220.1 | Symbols: | F-box family protein |
chr5:20446068-20447200 REVERSE
Length = 357
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 14 SASSTYFCVNFMGFDPSNKQYKVLNSWRHYRKPSTEYRVFTLGT--KEWRPLQSGPPFY- 70
+A ++ +F+G+DP QYKV+ + R+ VFTLG ++WR +Q Y
Sbjct: 139 TAGHSHVSTSFLGYDPFKNQYKVICLDNYKRRCC---HVFTLGDAIRKWRKIQYNFGLYF 195
Query: 71 AQRESICIDGVIFFRSWVSLRTDEGVAVLIAFDVQKETFRVIHLPRGAPTDVETSY-LIR 129
+CI G I++++ + VL+ FDV E F + P+ T ++ Y LI
Sbjct: 196 PLLPPVCIKGTIYYQA----KQYGSTYVLLCFDVISEKFDQVEAPK---TMMDHRYTLIN 248
Query: 130 LAGRXXXXXXXXXXXXXXXXXXXXXQNEIWTKHYIIFPSYLKKTETGQNFIVAGSLDTEE 189
G+ Q W+K + + +K + +A + + E
Sbjct: 249 YQGKLGFMCCQNRVEIWVMKNDEKKQE--WSKIFFYEMAGFEK------WHIARATPSGE 300
Query: 190 IIMAPQCL--STPFYVYYFDLARSKIRRVKILGLPEYDSFDLSSNLVSITNYVENILPL 246
I+ + L YVYY+ R+ +RRV++ G +Y L ++ + ++VEN + L
Sbjct: 301 IVFVNRLLLSCQTLYVYYYGPKRNSMRRVEVEG-TKYRRKHL-VHICPVPDHVENTMRL 357