Jatropha Genome Database

JcCB0053181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0053181.10 + phase: 0 /partial
         (490 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57590.1 | Symbols: BIO1 | BIO1 (biotin auxotroph 1); adenosy...   541   e-154

>AT5G57590.1 | Symbols: BIO1 | BIO1 (biotin auxotroph 1);
           adenosylmethionine-8-amino-7-oxononanoate transaminase |
           chr5:23318593-23322687 REVERSE
          Length = 833

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/436 (61%), Positives = 316/436 (72%), Gaps = 15/436 (3%)

Query: 54  FSASTSPPLQFPLNHPIYMIWGSNTSLGKTLVSTGLASSFLLSPPPAXXXXXXXXXXXFL 113
           F +++  P   PLNHP Y+IW +NTSLGKTLVSTG+A+SFLL  P +            L
Sbjct: 22  FKSTSVSPFHLPLNHPTYLIWSANTSLGKTLVSTGIAASFLLQQPSSSATK-------LL 74

Query: 114 YLKPVQTGFPSDSDSHFVFSKLSSLASRYNPPFXXXXXXXXXXXXXXXXXXFGGCFETNE 173
           YLKP+QTGFPSDSDS FVFSKL SL+ R   P                    G   E +E
Sbjct: 75  YLKPIQTGFPSDSDSRFVFSKLDSLSLRRQIPISISNSVLHSSLPAAKS--LGLNVEVSE 132

Query: 174 FKYGMYNLNFNEKKKVLRDEAGVSELICETLYAWKEAVSPHLAAERENGVVEDSAVMEML 233
              GM +LNF ++K V     G  EL+C+TLYAW+ A+SPHLAAEREN  VEDS V++M+
Sbjct: 133 --SGMCSLNFRDEKTV----TGAPELLCKTLYAWEAAISPHLAAERENATVEDSVVLQMI 186

Query: 234 EQCLSNELKFEGENETMDAFCVVETAGGVASPGPSGTLQCDLYRPFRFPGVLVGDGRLGG 293
           E+CL  E++   ++E  D  C+VETAGGVASPGPSGTLQCDLYRPFR PG+LVGDGRLGG
Sbjct: 187 EKCLKEEMECGVKSEKSDLLCLVETAGGVASPGPSGTLQCDLYRPFRLPGILVGDGRLGG 246

Query: 294 ISGTISAYESLKLRGYDIVAVVFEDHGLVNEVPLLSYLQNRXXXXXXXXXXQDMSNDLVE 353
           ISGTI+AYESLKLRGYDI AVVFEDHGLVNEVPL SYL+N+          +D S+DL+E
Sbjct: 247 ISGTIAAYESLKLRGYDIAAVVFEDHGLVNEVPLTSYLRNKVPVLVLPPVPKDPSDDLIE 306

Query: 354 WFGSSSEPFNSLQGILLSAFSERLRRLKEMPKKATDVFWWPFTQHKLVPEETVTVIDSRC 413
           WF  S   F +L+  ++ A  ERL RL  M K A +VFWWPFTQHKLV +ETVTVIDSRC
Sbjct: 307 WFVESDGVFKALKETMVLANLERLERLNGMAKLAGEVFWWPFTQHKLVHQETVTVIDSRC 366

Query: 414 GENFAVYKAQNKDFITEQFDACASWWTQGPNATLQIELARDMGYAAGRFGHVMFPENVYE 473
           GENF++YKA +   +++QFDACASWWTQGP+ T Q ELAR+MGY A RFGHVMFPENVYE
Sbjct: 367 GENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYE 426

Query: 474 PALKCAELLLEGVGKG 489
           PALKCAELLL+GVGKG
Sbjct: 427 PALKCAELLLDGVGKG 442