Jatropha Genome Database
- JcCB0050881.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0050881.20 + phase: 0 /partial
(152 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59370.2 | Symbols: ACT4 | ACT4 (ACTIN 4); structural constit... 321 1e-88
AT5G59370.1 | Symbols: ACT4 | ACT4 (ACTIN 4); structural constit... 321 1e-88
AT3G46520.1 | Symbols: ACT12 | ACT12 (ACTIN-12); structural cons... 321 1e-88
AT3G12110.1 | Symbols: ACT11 | ACT11 (actin-11); structural cons... 320 3e-88
AT3G53750.1 | Symbols: ACT3 | ACT3 (actin 3); structural constit... 319 4e-88
AT2G37620.2 | Symbols: ACT1, AAc1 | ACT1 (ACTIN 1); structural c... 319 4e-88
AT2G37620.1 | Symbols: ACT1, AAc1 | ACT1 (ACTIN 1); structural c... 319 4e-88
AT5G09810.1 | Symbols: ACT2, ACT7 | ACT7 (ACTIN 7); structural c... 318 9e-88
AT1G49240.1 | Symbols: ACT8 | ACT8 (ACTIN 8); copper ion binding... 309 4e-85
AT3G18780.1 | Symbols: ACT2, DER1, LSR2, ENL2 | ACT2 (ACTIN 2); ... 308 7e-85
AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | ACT2 (ACTIN 2); ... 307 1e-84
AT2G42100.1 | Symbols: | actin, putative | chr2:17560211-175619... 272 7e-74
AT2G42090.1 | Symbols: ACT9 | ACT9 (ACTIN 9); ATP binding / prot... 229 7e-61
AT2G42170.1 | Symbols: | actin, putative | chr2:17578683-175802... 187 3e-48
AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED P... 165 1e-41
AT1G13180.1 | Symbols: DIS1, ARP3, ATARP3 | DIS1 (DISTORTED TRIC... 123 6e-29
AT1G18450.1 | Symbols: ATARP4, ARP4 | ATARP4; structural constit... 120 4e-28
AT1G73910.1 | Symbols: ATARP4A | ATARP4A (Actin-related proteins... 94 3e-20
AT3G60830.1 | Symbols: ATARP7, ARP7 | ATARP7 (ACTIN-RELATED PROT... 85 2e-17
AT3G33520.1 | Symbols: ATARP6, ARP6, SUF3, ESD1 | ATARP6; struct... 75 2e-14
>AT5G59370.2 | Symbols: ACT4 | ACT4 (ACTIN 4); structural
constituent of cytoskeleton | chr5:23950109-23951586
FORWARD
Length = 377
Score = 321 bits (823), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
>AT5G59370.1 | Symbols: ACT4 | ACT4 (ACTIN 4); structural
constituent of cytoskeleton | chr5:23950109-23951586
FORWARD
Length = 377
Score = 321 bits (823), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
>AT3G46520.1 | Symbols: ACT12 | ACT12 (ACTIN-12); structural
constituent of cytoskeleton | chr3:17128567-17129981
FORWARD
Length = 377
Score = 321 bits (823), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 151/152 (99%), Positives = 151/152 (99%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
>AT3G12110.1 | Symbols: ACT11 | ACT11 (actin-11); structural
constituent of cytoskeleton | chr3:3858116-3859609
FORWARD
Length = 377
Score = 320 bits (819), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 150/152 (98%), Positives = 151/152 (99%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
>AT3G53750.1 | Symbols: ACT3 | ACT3 (actin 3); structural
constituent of cytoskeleton | chr3:19915924-19917371
FORWARD
Length = 377
Score = 319 bits (817), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 149/152 (98%), Positives = 150/152 (98%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 152
>AT2G37620.2 | Symbols: ACT1, AAc1 | ACT1 (ACTIN 1); structural
constituent of cytoskeleton | chr2:15779761-15781241
FORWARD
Length = 377
Score = 319 bits (817), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 149/152 (98%), Positives = 150/152 (98%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 152
>AT2G37620.1 | Symbols: ACT1, AAc1 | ACT1 (ACTIN 1); structural
constituent of cytoskeleton | chr2:15779761-15781241
FORWARD
Length = 377
Score = 319 bits (817), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 149/152 (98%), Positives = 150/152 (98%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 152
>AT5G09810.1 | Symbols: ACT2, ACT7 | ACT7 (ACTIN 7); structural
constituent of cytoskeleton | chr5:3052809-3054220
FORWARD
Length = 377
Score = 318 bits (815), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 149/152 (98%), Positives = 150/152 (98%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTG 152
>AT1G49240.1 | Symbols: ACT8 | ACT8 (ACTIN 8); copper ion binding /
structural constituent of cytoskeleton |
chr1:18216539-18217947 FORWARD
Length = 377
Score = 309 bits (792), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 142/152 (93%), Positives = 149/152 (98%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEA
Sbjct: 1 MADADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 152
>AT3G18780.1 | Symbols: ACT2, DER1, LSR2, ENL2 | ACT2 (ACTIN 2);
structural constituent of cytoskeleton |
chr3:6475535-6476728 FORWARD
Length = 371
Score = 308 bits (790), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 141/152 (92%), Positives = 149/152 (98%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MA+ +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEA
Sbjct: 1 MAEADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 152
>AT3G18780.2 | Symbols: ACT2, DER1, LSR2, ENL2 | ACT2 (ACTIN 2);
structural constituent of cytoskeleton |
chr3:6475535-6476832 FORWARD
Length = 377
Score = 307 bits (787), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 141/152 (92%), Positives = 149/152 (98%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MA+ +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEA
Sbjct: 1 MAEADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
QSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
MTQIMFETFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 152
>AT2G42100.1 | Symbols: | actin, putative | chr2:17560211-17561945
FORWARD
Length = 378
Score = 272 bits (695), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 120/143 (83%), Positives = 135/143 (94%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM +KD +VGDEAQ++RGIL+L
Sbjct: 11 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGILSL 70
Query: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
KYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F
Sbjct: 71 KYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESF 130
Query: 130 NTPAMYVAIQAVLSLYASGRTTG 152
P+MY+ IQAVLSLY+SGRTTG
Sbjct: 131 AFPSMYIGIQAVLSLYSSGRTTG 153
>AT2G42090.1 | Symbols: ACT9 | ACT9 (ACTIN 9); ATP binding / protein
binding / structural constituent of cytoskeleton |
chr2:17556744-17558369 FORWARD
Length = 366
Score = 229 bits (583), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 104/146 (71%), Positives = 124/146 (84%), Gaps = 5/146 (3%)
Query: 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
++P+VCD G GMV+AGFAGD+AP+ VFP +VGRPR G+ ++YVG+E + R I
Sbjct: 1 MKPIVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDI 55
Query: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
LTLK P+EHGIVNNWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMF
Sbjct: 56 LTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMF 115
Query: 127 ETFNTPAMYVAIQAVLSLYASGRTTG 152
E+F+ PAMYV++Q+VL LY+SGRTTG
Sbjct: 116 ESFDVPAMYVSMQSVLYLYSSGRTTG 141
>AT2G42170.1 | Symbols: | actin, putative | chr2:17578683-17580222
FORWARD
Length = 329
Score = 187 bits (474), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 98/107 (91%)
Query: 46 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPV 105
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTG 107
>AT3G27000.1 | Symbols: ARP2, ATARP2, WRM | ARP2 (ACTIN RELATED
PROTEIN 2); protein binding / structural constituent of
cytoskeleton | chr3:9952787-9955784 REVERSE
Length = 389
Score = 165 bits (417), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
Query: 3 DNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
DN+++ +VCDNGTG VK GFAG++ P +VFP +VGRP R+ ++ KD VG+
Sbjct: 2 DNKNV--VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETC 59
Query: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
M + MFE +N +++ IQAVL+LYA G TG
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTG 151
>AT1G13180.1 | Symbols: DIS1, ARP3, ATARP3 | DIS1 (DISTORTED
TRICHOMES 1); ATP binding / actin binding / protein
binding / structural constituent of cytoskeleton |
chr1:4495394-4498204 FORWARD
Length = 427
Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 19/161 (11%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG-------RPRHTGVMVGMGQKDA-------- 54
+V DNGTG K GFAG+ P + P++V + + + Q +A
Sbjct: 9 IVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADLDF 68
Query: 55 YVGDEAQSKR---GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 111
Y+GDEA +K L YPIEHG V +WD ME+ W +N LR PE+H LLTE+P
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 112 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
L P +RE +I+FETFN P +Y+A+ +VL+L A+G TT
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAVNSVLAL-AAGYTTS 168
>AT1G18450.1 | Symbols: ATARP4, ARP4 | ATARP4; structural
constituent of cytoskeleton | chr1:6348199-6351766
FORWARD
Length = 441
Score = 120 bits (300), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 96/174 (55%), Gaps = 22/174 (12%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVG---------------------R 39
M +++ +V D G+ KAG+AG+DAP+AVFPS++G
Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSE 60
Query: 40 PRHTGVMVGMGQKDAYVGDEAQS-KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRV 98
T ++ YVG +A S +R + + PI+ GIV++WD ++ IW H F + L +
Sbjct: 61 DSKTESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMI 120
Query: 99 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 152
P EHP+LL E PLN + REK ++MFE + PA+++A VL+ +A+GR T
Sbjct: 121 DPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATS 174
>AT1G73910.1 | Symbols: ATARP4A | ATARP4A (Actin-related proteins
4A); protein binding / structural constituent of
cytoskeleton | chr1:27789293-27790187 FORWARD
Length = 145
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 19/145 (13%)
Query: 1 MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG------------ 48
M +++ +V D G+ KAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKES 60
Query: 49 ---MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 104
G++ Y G +A + +R + + P + GIV +WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 105 VLLTEAPLNPKANREKMTQIMFETF 129
+LL E PLN + REK F TF
Sbjct: 121 MLLAEPPLNSQQQREKSG---FSTF 142
>AT3G60830.1 | Symbols: ATARP7, ARP7 | ATARP7 (ACTIN-RELATED PROTEIN
7); structural constituent of cytoskeleton |
chr3:22474298-22476000 FORWARD
Length = 363
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
++ LV D G+ +KAG A D +P + PS + R MV G A D +
Sbjct: 1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFE 51
Query: 66 ILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 124
+TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+
Sbjct: 52 DVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQL 110
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTG 152
MFETFN Y + QAVLSLYA GR +G
Sbjct: 111 MFETFNVSGFYASEQAVLSLYAVGRISG 138
>AT3G33520.1 | Symbols: ATARP6, ARP6, SUF3, ESD1 | ATARP6;
structural constituent of cytoskeleton |
chr3:14093791-14095476 REVERSE
Length = 421
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
+V DNG G++KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 130 NTPAMYVA-IQAVLSLYASGR 149
++Y+A Q+++ LY + R
Sbjct: 122 GFSSLYIAHPQSLVHLYEASR 142