Jatropha Genome Database

JcCB0050881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050881.10 + phase: 0 /pseudo/partial
         (277 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55360.1 | Symbols: CER10, ECR, ATTSC13, TSC13 | CER10; 3-oxo...   416   e-116
AT5G16010.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...    72   4e-13

>AT3G55360.1 | Symbols: CER10, ECR, ATTSC13, TSC13 | CER10;
           3-oxo-5-alpha-steroid 4-dehydrogenase/ fatty acid
           elongase/ trans-2-enoyl-CoA reductase (NADPH) |
           chr3:20521186-20522856 REVERSE
          Length = 310

 Score =  416 bits (1068), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/249 (79%), Positives = 215/249 (86%), Gaps = 2/249 (0%)

Query: 31  LNYKKSLKDYCDGN--SLTVVLKDLGPQVSYRTLFFWEYLGXXXXXXXXXXXXXXQYFGY 88
           LN KKSLK+YCDGN  SLTVV KDLG QVSYRTLFF+EYLG              ++ GY
Sbjct: 62  LNSKKSLKEYCDGNNNSLTVVFKDLGAQVSYRTLFFFEYLGPLLIYPVFYYFPVYKFLGY 121

Query: 89  KGERVIQPVQTYALLYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYIAY 148
             + VI PVQTYA+ YWCFHYFKRI+ETFFVHRFSHATSP+ NVFRNCAYYW+FG YIAY
Sbjct: 122 GEDCVIHPVQTYAMYYWCFHYFKRILETFFVHRFSHATSPIGNVFRNCAYYWSFGAYIAY 181

Query: 149 YVNHPLYTPVSDLQWKIGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVT 208
           YVNHPLYTPVSDLQ KIGFGFGL+CQVANFYCHILLKNLR P G GGYQIPRGFLF+IVT
Sbjct: 182 YVNHPLYTPVSDLQMKIGFGFGLVCQVANFYCHILLKNLRDPSGAGGYQIPRGFLFNIVT 241

Query: 209 CANYTTEIYQWLGFNIATQTVAGYIFLVVAAMIMTNWALAKHRRLKKLFDGKDGRPKYPR 268
           CANYTTEIYQWLGFNIATQT+AGY+FL VAA+IMTNWAL KH RL+K+FDGKDG+PKYPR
Sbjct: 242 CANYTTEIYQWLGFNIATQTIAGYVFLAVAALIMTNWALGKHSRLRKIFDGKDGKPKYPR 301

Query: 269 RWVILPPFL 277
           RWVILPPFL
Sbjct: 302 RWVILPPFL 310


>AT5G16010.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr5:5227982-5229012 FORWARD
          Length = 268

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 106 CFHYFKRIMETFFVHRFSHATSPLSNVFRNCAYYWTFGCYI-AYYVNHPLYTPVSDLQWK 164
             H+FKR+ E  F+H++S   +  S +  + +Y+ +    + +  +   L  P  D++  
Sbjct: 102 ALHFFKRVFEVLFIHKYSGGMAIDSALTISSSYFSSTALMLYSQNLTLGLTEPSFDMKLA 161

Query: 165 IGFGFGLICQVANFYCHILLKNLRSPDGGGGYQIPRGFLFDIVTCANYTTEIYQWLGFNI 224
            G    ++  V N Y H+LL  LR  DG   Y+IP+G LFDI+ C +Y  EI  +  F +
Sbjct: 162 -GVVMFVVGIVGNLYHHVLLAKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFL 220

Query: 225 ATQTVAGYIF 234
            +QT+  + F
Sbjct: 221 ISQTIYSFSF 230