Jatropha Genome Database

JcCB0050531.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050531.20 - phase: 0 
         (263 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38050.1 | Symbols: DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2...   346   1e-95
AT5G16010.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...    78   5e-15
AT1G72590.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...    72   4e-13
AT2G16530.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...    64   1e-10
AT2G16530.2 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase ...    64   1e-10
AT3G55360.1 | Symbols: CER10, ECR, ATTSC13, TSC13 | CER10; 3-oxo...    49   4e-06

>AT2G38050.1 | Symbols: DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2);
           sterol 5-alpha reductase | chr2:15921303-15922176
           REVERSE
          Length = 262

 Score =  346 bits (887), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 162/261 (62%), Positives = 200/261 (76%), Gaps = 4/261 (1%)

Query: 4   SDQNLFDYSLLAFYLIGPPTFISLRFLQAPYGKHNRPGWGPTIFPPLAWFLMESXXXXXX 63
           +D+  F Y LL     GPPT + L+FLQAPYGKHNR GWGPT+ PP+AWF+MES      
Sbjct: 5   ADKTFFRYCLLTLIFAGPPTAVLLKFLQAPYGKHNRTGWGPTVSPPIAWFVMESPTLWLT 64

Query: 64  XXXXXXGQHATNFKALILMSPYIIHYFHRTCIYPLRLYLNASQQNTKAASGFPVSVALIA 123
                 G+HA N K+L+L SPY+IHYFHRT IYPLRL+ ++        +GFP+++A +A
Sbjct: 65  LLLFPFGRHALNPKSLLLFSPYLIHYFHRTIIYPLRLFRSSFPA---GKNGFPITIAALA 121

Query: 124 FGFNLLNAYLQSRWVSHYKDDYDSDGWFWWKFIGGLFVFIWGMWINIWSDRVLVGLKRQG 183
           F FNLLN Y+Q+RWVSHYKDDY+   WFWW+F+ G+ VFI GM+INI SDR LV LK++ 
Sbjct: 122 FTFNLLNGYIQARWVSHYKDDYEDGNWFWWRFVIGMVVFITGMYINITSDRTLVRLKKEN 181

Query: 184 -GGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANHKW 242
            GGY +PRGGWFELVSCPNYFGE +EW+GW++MTWSW G GFFLYTC+NL PRA A+HKW
Sbjct: 182 RGGYVIPRGGWFELVSCPNYFGEAIEWLGWAVMTWSWAGIGFFLYTCSNLFPRARASHKW 241

Query: 243 YQDKFGEDYPKSRKAVIPFLY 263
           Y  KF E+YPK+RKAVIPF+Y
Sbjct: 242 YIAKFKEEYPKTRKAVIPFVY 262


>AT5G16010.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr5:5227982-5229012 FORWARD
          Length = 268

 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 101/193 (52%), Gaps = 15/193 (7%)

Query: 73  ATNFKALILMSPYIIHYFHRTCIYPLRLYLNASQQNTKAASGFPVSVALIAFGFNLLNAY 132
           + + + L+L S   +H+F R  ++ + L+++         S   +S +   F    L  Y
Sbjct: 89  SDDLRFLLLKSALALHFFKR--VFEV-LFIHKYSGGMAIDSALTISSSY--FSSTALMLY 143

Query: 133 LQSRWVSHYKDDYDSDGWFWWKFIGGLFVFIWGMWINIWSDRVLVGLKRQGGG--YKVPR 190
            Q+  +   +  +D         + G+ +F+ G+  N++   +L  L+++ G   YK+P+
Sbjct: 144 SQNLTLGLTEPSFDMK-------LAGVVMFVVGIVGNLYHHVLLAKLRKEDGKKEYKIPK 196

Query: 191 GGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANHKWYQDKFGED 250
           GG F+++ CP+Y  EI+ +  + L++ +   F F + T   L+ R++A   WY  KF +D
Sbjct: 197 GGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIGRSYATRTWYLSKF-DD 255

Query: 251 YPKSRKAVIPFLY 263
           +PK  KA+IPF++
Sbjct: 256 FPKHIKALIPFVF 268


>AT1G72590.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr1:27335601-27336989 FORWARD
          Length = 320

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 15/117 (12%)

Query: 156 IGGLFVFIWGMWINIWSDRVLVGLKR----QGGGYKVPRGGWFELVSCPNYFGEIVEWVG 211
           IGG  +F+WG WI+      ++G  R    Q   Y +P G WFE+VSCP++  EIV ++G
Sbjct: 210 IGGA-IFLWG-WIHQRRCHAILGSLREYPSQAKEYIIPYGDWFEMVSCPHFLAEIVLYLG 267

Query: 212 WSLMTWS-----WVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFLY 263
             + +       W+ FGF     ANL   A   H+WY  KF E+YP SR A+ P +Y
Sbjct: 268 LLISSGGTDISIWLLFGF---VAANLTYAAGETHRWYLQKF-ENYPASRHAIFPHVY 320


>AT2G16530.1 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr2:7163276-7165064 REVERSE
          Length = 343

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 15/117 (12%)

Query: 156 IGGLFVFIWGMWINIWSDRVLVGLKR----QGGGYKVPRGGWFELVSCPNYFGEIVEWVG 211
           IGG  +F+WG WI+      ++G  R    Q   Y +P G WF +VS P++  EIV + G
Sbjct: 233 IGGA-IFLWG-WIHQRRCHAILGSLRENPSQAKEYIIPYGDWFGMVSSPHFLAEIVLYAG 290

Query: 212 WSLMTWS-----WVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFLY 263
             + +       W+ FGF     ANL   A   H+WY  KF E+YP +R A+ P++Y
Sbjct: 291 LLIASGGTDITIWLLFGF---VAANLTYAAGETHRWYLRKF-ENYPANRHAIFPYVY 343


>AT2G16530.2 | Symbols:  | 3-oxo-5-alpha-steroid 4-dehydrogenase
           family protein / steroid 5-alpha-reductase family
           protein | chr2:7163276-7165064 REVERSE
          Length = 342

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 15/119 (12%)

Query: 154 KFIGGLFVFIWGMWINIWSDRVLVGLKR----QGGGYKVPRGGWFELVSCPNYFGEIVEW 209
           ++IGG  +F+WG WI+      ++G  R    Q   Y +P G WF +VS P++  EIV +
Sbjct: 230 QWIGGA-IFLWG-WIHQRRCHAILGSLRENPSQAKEYIIPYGDWFGMVSSPHFLAEIVLY 287

Query: 210 VGWSLMTWS-----WVGFGFFLYTCANLVPRAHANHKWYQDKFGEDYPKSRKAVIPFLY 263
            G  + +       W+ FGF     ANL   A   H+WY  KF E+YP +R A+ P++Y
Sbjct: 288 AGLLIASGGTDITIWLLFGF---VAANLTYAAGETHRWYLRKF-ENYPANRHAIFPYVY 342


>AT3G55360.1 | Symbols: CER10, ECR, ATTSC13, TSC13 | CER10;
           3-oxo-5-alpha-steroid 4-dehydrogenase/ fatty acid
           elongase/ trans-2-enoyl-CoA reductase (NADPH) |
           chr3:20521186-20522856 REVERSE
          Length = 310

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 183 GGGYKVPRGGWFELVSCPNYFGEIVEWVGWSLMTWSWVGFGFFLYTCANLVPRAHANHKW 242
            GGY++PRG  F +V+C NY  EI +W+G+++ T +  G+ F       +   A   H  
Sbjct: 226 AGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTIAGYVFLAVAALIMTNWALGKHSR 285

Query: 243 YQDKF-GED----YPKSRKAVIPFL 262
            +  F G+D    YP+    + PFL
Sbjct: 286 LRKIFDGKDGKPKYPRRWVILPPFL 310