Jatropha Genome Database

JcCB0050531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050531.10 + phase: 0 /partial
         (356 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38040.2 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase | chr...   209   2e-54
AT2G38040.1 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase | chr...   209   2e-54

>AT2G38040.2 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase |
           chr2:15917612-15920749 FORWARD
          Length = 769

 Score =  209 bits (533), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/259 (46%), Positives = 174/259 (67%), Gaps = 7/259 (2%)

Query: 46  LNEMIEKLKREIDLEFSEAVKAMGFKDRFATLREEFLKANSQDQLMHPGLMDKIEKLKNE 105
           LNEMIEKLK EID E++EA  A+G ++R   +REEF KA+S++ LMHP L++KIEKLK E
Sbjct: 463 LNEMIEKLKSEIDDEYTEAAIAVGLEERLTAMREEFSKASSEEHLMHPVLIEKIEKLKEE 522

Query: 106 FTQGLSAAPNFPSLKYKLDMLKEFSKAKNISEKNSKGLTLKQEINKKLKEVMDQPDMKEK 165
           F   L+ APN+ SLK KL+ML++FS+AK  SE  S    LK+EINK+ +E +D+P+++EK
Sbjct: 523 FNTRLTDAPNYESLKSKLNMLRDFSRAKAASEATS----LKKEINKRFQEAVDRPEIREK 578

Query: 166 MEALEAEVLRSGAYNEGELDXXXXXXXXXXXXXXXXXLANVFKSLGLEVEIVKSKAKELG 225
           +EA++AEV  SGA +  EL                  +A V KS+GLE++ VK   K+  
Sbjct: 579 VEAIKAEVASSGASSFDELPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQKDTA 638

Query: 226 EQTPLL--DFKAKVENLKEQTNKKIEGLINSSDLKNMIELLKLEVAKAGNKPDVT-SKNK 282
           EQ      + + K+E L ++   KIE ++ + ++K+M+ELLK+E AKA   P VT +  K
Sbjct: 639 EQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKASKTPGVTEAYQK 698

Query: 283 IEALEHQIKQRLSSAINST 301
           IEALE QIKQ+++ A+N++
Sbjct: 699 IEALEQQIKQKIAEALNTS 717


>AT2G38040.1 | Symbols: CAC3 | CAC3; acetyl-CoA carboxylase |
           chr2:15917612-15920749 FORWARD
          Length = 769

 Score =  209 bits (533), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/259 (46%), Positives = 174/259 (67%), Gaps = 7/259 (2%)

Query: 46  LNEMIEKLKREIDLEFSEAVKAMGFKDRFATLREEFLKANSQDQLMHPGLMDKIEKLKNE 105
           LNEMIEKLK EID E++EA  A+G ++R   +REEF KA+S++ LMHP L++KIEKLK E
Sbjct: 463 LNEMIEKLKSEIDDEYTEAAIAVGLEERLTAMREEFSKASSEEHLMHPVLIEKIEKLKEE 522

Query: 106 FTQGLSAAPNFPSLKYKLDMLKEFSKAKNISEKNSKGLTLKQEINKKLKEVMDQPDMKEK 165
           F   L+ APN+ SLK KL+ML++FS+AK  SE  S    LK+EINK+ +E +D+P+++EK
Sbjct: 523 FNTRLTDAPNYESLKSKLNMLRDFSRAKAASEATS----LKKEINKRFQEAVDRPEIREK 578

Query: 166 MEALEAEVLRSGAYNEGELDXXXXXXXXXXXXXXXXXLANVFKSLGLEVEIVKSKAKELG 225
           +EA++AEV  SGA +  EL                  +A V KS+GLE++ VK   K+  
Sbjct: 579 VEAIKAEVASSGASSFDELPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQKDTA 638

Query: 226 EQTPLL--DFKAKVENLKEQTNKKIEGLINSSDLKNMIELLKLEVAKAGNKPDVT-SKNK 282
           EQ      + + K+E L ++   KIE ++ + ++K+M+ELLK+E AKA   P VT +  K
Sbjct: 639 EQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKASKTPGVTEAYQK 698

Query: 283 IEALEHQIKQRLSSAINST 301
           IEALE QIKQ+++ A+N++
Sbjct: 699 IEALEQQIKQKIAEALNTS 717