Jatropha Genome Database

JcCB0050421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0050421.10 - phase: 0 /partial
         (124 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22130.1 | Symbols: PNT1 | PNT1 (PEANUT 1); alpha-1,4-mannosy...   210   2e-55

>AT5G22130.1 | Symbols: PNT1 | PNT1 (PEANUT 1);
           alpha-1,4-mannosyltransferase/ mannosyltransferase/
           transferase, transferring glycosyl groups |
           chr5:7337486-7339831 REVERSE
          Length = 450

 Score =  210 bits (534), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 97/122 (79%), Positives = 107/122 (87%)

Query: 3   WINIRKLLLFSAIFRLILIIYGEWQDSHMEVRYTDVDYLVFSDAASLMASGESPYKRSTY 62
           W+  R LL+FS + R+ LI+YGEWQD+HMEVRYTDVDY+VFSDAASLMASGESPYKR+TY
Sbjct: 15  WMKFRSLLVFSMLLRVFLIVYGEWQDAHMEVRYTDVDYIVFSDAASLMASGESPYKRTTY 74

Query: 63  RYSPLLAFLLIPNSLIHRSWGKFLFSASDLLVGLFIHSILKRRKVPEDLCLYSVMVWLLN 122
           RYSPLLA LL PNS  HRSWGKFLFSASDLLVG FIH ILK+RKVPE +C YSVMVWL N
Sbjct: 75  RYSPLLALLLTPNSFFHRSWGKFLFSASDLLVGWFIHKILKQRKVPEKICTYSVMVWLFN 134

Query: 123 PF 124
           PF
Sbjct: 135 PF 136