Jatropha Genome Database

JcCB0049771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0049771.10 - phase: 0 
         (202 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33630.2 | Symbols: EX1 | EX1 (EXECUTER1) | chr4:16155560-161...    94   8e-20
AT4G33630.1 | Symbols: EX1 | EX1 (EXECUTER1) | chr4:16155560-161...    94   8e-20
AT1G27510.1 | Symbols:  | INVOLVED IN: response to singlet oxyge...    60   6e-10

>AT4G33630.2 | Symbols: EX1 | EX1 (EXECUTER1) |
           chr4:16155560-16159094 FORWARD
          Length = 684

 Score = 93.6 bits (231), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 68  RWDAAFHGVIESAKKRIDSLINPRRKEVEVGAVGDRESGKGDKVXXXXXXXXXXXXXXXX 127
           RWD+A   V++SA KR DS+++           G++ S   +K+                
Sbjct: 66  RWDSAIQDVLKSAIKRFDSVLS--WYATLDNDDGEQGSENVEKIDDDWDWDRWKKHFDQ- 122

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           VD+Q+R++SVLKSQLN A+ REDYE             TND+VG VMS   RA+ EE YK
Sbjct: 123 VDDQDRLLSVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEERYK 182

Query: 188 DAAFLRDNAGAGLV 201
           DA +LRD AGAGLV
Sbjct: 183 DAVYLRDKAGAGLV 196


>AT4G33630.1 | Symbols: EX1 | EX1 (EXECUTER1) |
           chr4:16155560-16159094 FORWARD
          Length = 684

 Score = 93.6 bits (231), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 75/134 (55%), Gaps = 3/134 (2%)

Query: 68  RWDAAFHGVIESAKKRIDSLINPRRKEVEVGAVGDRESGKGDKVXXXXXXXXXXXXXXXX 127
           RWD+A   V++SA KR DS+++           G++ S   +K+                
Sbjct: 66  RWDSAIQDVLKSAIKRFDSVLS--WYATLDNDDGEQGSENVEKIDDDWDWDRWKKHFDQ- 122

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           VD+Q+R++SVLKSQLN A+ REDYE             TND+VG VMS   RA+ EE YK
Sbjct: 123 VDDQDRLLSVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEERYK 182

Query: 188 DAAFLRDNAGAGLV 201
           DA +LRD AGAGLV
Sbjct: 183 DAVYLRDKAGAGLV 196


>AT1G27510.1 | Symbols:  | INVOLVED IN: response to singlet oxygen;
           LOCATED IN: thylakoid membrane; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; BEST
           Arabidopsis thaliana protein match is: EX1 (EXECUTER1)
           (TAIR:AT4G33630.2); Has 213 Blast hits to 208 proteins
           in 76 species: Archae - 0; Bacteria - 13; Metazoa - 63;
           Fungi - 31; Plants - 69; Viruses - 0; Other Eukaryotes -
           37 (source: NCBI BLink). | chr1:9554945-9558293 REVERSE
          Length = 651

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 43/74 (58%)

Query: 128 VDEQERIVSVLKSQLNHAVNREDYEXXXXXXXXXXXXXTNDSVGTVMSQLNRAVTEEHYK 187
           ++E E +VS+LKSQL  AV +ED+E              +D+V  +M QL  AV EE Y 
Sbjct: 99  IEEVESVVSLLKSQLEDAVEKEDFEEAVKLKQAISEATVDDAVAEIMRQLQTAVNEERYH 158

Query: 188 DAAFLRDNAGAGLV 201
           DA+ L +  G+GLV
Sbjct: 159 DASRLCNETGSGLV 172