Jatropha Genome Database
- JcCB0049461.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0049461.10 - phase: 0 /partial
(210 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31810.1 | Symbols: | actin binding | chr1:11399922-11405761... 317 5e-87
AT2G25050.1 | Symbols: | formin homology 2 domain-containing pr... 285 1e-77
AT5G58160.1 | Symbols: | actin binding | chr5:23533724-23539465... 274 2e-74
AT5G07760.1 | Symbols: | formin homology 2 domain-containing pr... 251 3e-67
AT3G32400.1 | Symbols: | formin homology 2 domain-containing pr... 245 1e-65
AT5G07770.1 | Symbols: | formin homology 2 domain-containing pr... 237 5e-63
AT5G07650.1 | Symbols: | formin homology 2 domain-containing pr... 235 2e-62
AT5G07780.1 | Symbols: | formin homology 2 domain-containing pr... 206 1e-53
AT1G42980.1 | Symbols: | formin homology 2 domain-containing pr... 167 6e-42
AT5G67470.1 | Symbols: | formin homology 2 domain-containing pr... 114 6e-26
AT3G25500.1 | Symbols: AFH1, FH1, AHF1, ATFH1 | AFH1 (FORMIN HOM... 103 8e-23
AT2G43800.1 | Symbols: | formin homology 2 domain-containing pr... 102 2e-22
AT3G05470.1 | Symbols: | formin homology 2 domain-containing pr... 101 4e-22
AT4G15200.1 | Symbols: | actin binding | chr4:8663486-8665759 R... 94 5e-20
AT1G70140.1 | Symbols: ATFH8 | ATFH8 (formin 8); actin binding /... 92 3e-19
AT1G59910.1 | Symbols: | formin homology 2 domain-containing pr... 90 8e-19
AT5G54650.2 | Symbols: Fh5, ATFH5 | Fh5 (FORMIN HOMOLOGY5); acti... 89 1e-18
AT5G54650.1 | Symbols: Fh5, ATFH5 | Fh5 (FORMIN HOMOLOGY5); acti... 89 1e-18
AT5G48360.1 | Symbols: | formin homology 2 domain-containing pr... 84 5e-17
AT3G07540.1 | Symbols: | formin homology 2 domain-containing pr... 59 3e-09
AT1G24150.1 | Symbols: ATFH4, FH4 | FH4 (FORMIN HOMOLOGUE 4); ac... 56 2e-08
>AT1G31810.1 | Symbols: | actin binding | chr1:11399922-11405761
REVERSE
Length = 1230
Score = 317 bits (811), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 151/175 (86%), Positives = 167/175 (95%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
VDLRRA NCEIMLTKIK+PLP+M++AVLALDS +LDIDQVENLIKFCPTKEEME L+NYT
Sbjct: 888 VDLRRANNCEIMLTKIKIPLPDMLSAVLALDSLALDIDQVENLIKFCPTKEEMELLRNYT 947
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
GDKEMLGKCEQFF+ELMKVPR+EAKLRVF F+ITF++QV++L+ LNTIN A +EVKESA
Sbjct: 948 GDKEMLGKCEQFFMELMKVPRIEAKLRVFGFKITFASQVEELKSCLNTINAATKEVKESA 1007
Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK+
Sbjct: 1008 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKL 1062
>AT2G25050.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr2:10654108-10659383 REVERSE
Length = 1111
Score = 285 bits (729), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 160/175 (91%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
++LRRAYNCEIML+K+K+PLP+++++VLALD S +D+DQV+NLIKFCPTKEE E LK +T
Sbjct: 783 IELRRAYNCEIMLSKVKIPLPDLMSSVLALDESVIDVDQVDNLIKFCPTKEEAELLKGFT 842
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
G+KE LG+CEQFFLEL+KVPRVE KLRVF+F+I F +QV DLR LNTI++AA EV+ SA
Sbjct: 843 GNKETLGRCEQFFLELLKVPRVETKLRVFSFKIQFHSQVTDLRRGLNTIHSAANEVRGSA 902
Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
KL++IMQTIL+LGNALN GTARGSA+GF+LDSLLKL+DTR+RN+KMTLMHYLCKV
Sbjct: 903 KLKRIMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRSRNSKMTLMHYLCKV 957
>AT5G58160.1 | Symbols: | actin binding | chr5:23533724-23539465
FORWARD
Length = 1324
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 126/180 (70%), Positives = 156/180 (86%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
++ RRAYNCEIML+K+KVPL ++ N+VL L+ S+LD DQVENLIKFCPT+EEME LK YT
Sbjct: 938 IEHRRAYNCEIMLSKVKVPLQDLTNSVLNLEESALDADQVENLIKFCPTREEMELLKGYT 997
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
GDK+ LGKCE FFLE+MKVPRVE KLRVF+F++ F++Q+ +LR +L +N+AA +VK S
Sbjct: 998 GDKDKLGKCELFFLEMMKVPRVETKLRVFSFKMQFTSQISELRNSLGVVNSAAEQVKNSE 1057
Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKVDLQNL 202
K ++IMQTIL+LGNALNQGTARG+AVGFKLDSL KLS+TRARNN+MTLMHYLCKV +L
Sbjct: 1058 KFKRIMQTILSLGNALNQGTARGAAVGFKLDSLPKLSETRARNNRMTLMHYLCKVSFYSL 1117
>AT5G07760.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr5:2468239-2473657 FORWARD
Length = 853
Score = 251 bits (640), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 151/197 (76%), Gaps = 13/197 (6%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D RRA+N IML K+++PLP+M+ AVL +D S LD+DQ+ENLI+FCPTKEEM+ LKNYT
Sbjct: 524 IDQRRAFNTMIMLQKVEMPLPDMMAAVLGMDESVLDVDQIENLIRFCPTKEEMKLLKNYT 583
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
GDK LGKCEQ+FLELMKVP VE+KLRVF+F+I F TQ+ +L LNT+N+A E++ S
Sbjct: 584 GDKATLGKCEQYFLELMKVPGVESKLRVFSFKIHFGTQIKELNKGLNTVNSACEEIRTSQ 643
Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV----- 197
KL++IM+ IL LGN LNQGTARGSAVGFKLDSLL LS+ + N MTLMHYLCKV
Sbjct: 644 KLKEIMKIILCLGNILNQGTARGSAVGFKLDSLLNLSEKCSANTNMTLMHYLCKVLASKA 703
Query: 198 --------DLQNLNSES 206
DL+NL S S
Sbjct: 704 SDLLDFHKDLENLESAS 720
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 111/198 (56%), Gaps = 25/198 (12%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSS-LDIDQVENLIKFCPTKEEMETLKNY 81
+DLRRA + E+ L + + LP + A + S LD D++ LI PTKE ME L +Y
Sbjct: 197 IDLRRATDTELTLMLLNIRLPADMMAAIMAMDESVLDDDEIRGLINLFPTKENMELLMSY 256
Query: 82 TGDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
TG K L K EQ+F EL KV RVE+KLRVF F+I FST++ + LN +N+A EV S
Sbjct: 257 TGGKWTLEKWEQYFQELRKVLRVESKLRVFYFKIQFSTKITQFKKRLNVVNSACEEVCSS 316
Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV---- 197
KL++IM+ I LGN NQGT RG VGF LDSL S MH CKV
Sbjct: 317 QKLKEIMKKITCLGNTSNQGTGRGVTVGFNLDSLCVKS-----------MHNFCKVLASE 365
Query: 198 ---------DLQNLNSES 206
DLQ+L S S
Sbjct: 366 ASDLLDVHKDLQSLESAS 383
>AT3G32400.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr3:13356995-13360572 REVERSE
Length = 488
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 144/171 (84%), Gaps = 8/171 (4%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
++L+RAYNCEIML+K+K+PLP+++++VLALD S +D+DQV+NLIKFCPTKEE E LK +
Sbjct: 159 IELKRAYNCEIMLSKVKIPLPDLMSSVLALDESVIDVDQVDNLIKFCPTKEEAELLKGFI 218
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAARE----- 137
G+KE LG+CEQFFLEL+KVPRVE KLRVF+F+I F +QV DLR LNTI++A E
Sbjct: 219 GNKETLGRCEQFFLELLKVPRVETKLRVFSFKIQFHSQVTDLRRGLNTIHSATNEASRFF 278
Query: 138 ---VKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARN 185
V+ S KL++IMQTIL+LGNALN GTARGSA+GF LDSLLKL+DTR+RN
Sbjct: 279 VQIVRGSTKLKRIMQTILSLGNALNHGTARGSAIGFHLDSLLKLTDTRSRN 329
>AT5G07770.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr5:2474816-2479022 FORWARD
Length = 722
Score = 237 bits (604), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 145/195 (74%), Gaps = 13/195 (6%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+DL+RA N + L +K+PLP+M+ AV+A+D S LD+DQ+ENLI+ CPTKEEME LKNYT
Sbjct: 252 IDLKRANNTIVNLKILKMPLPDMMAAVMAMDESVLDVDQIENLIQLCPTKEEMELLKNYT 311
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
GDK LGK EQ LELMKVPR EAKLRV +F+I F T++ R LN +N+A EV+ S
Sbjct: 312 GDKATLGKSEQCLLELMKVPRFEAKLRVLSFKIPFGTKITKFRKMLNVVNSACEEVRSSQ 371
Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV----- 197
L++IM+ IL LGN LNQGTARGSAVGF+LDSLL LS+TRA NNKMTLMHYLCKV
Sbjct: 372 MLKEIMKIILFLGNTLNQGTARGSAVGFRLDSLLILSETRADNNKMTLMHYLCKVLASKA 431
Query: 198 --------DLQNLNS 204
DLQ+L S
Sbjct: 432 ADLLDFHKDLQSLES 446
>AT5G07650.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr5:2416375-2421814 REVERSE
Length = 815
Score = 235 bits (599), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 142/200 (71%), Gaps = 24/200 (12%)
Query: 22 QVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNY 81
Q+DLRRA + EIMLTK+ +PL +M+ AVL +D LD+DQ+ENLI+FCPTKEEME LKNY
Sbjct: 469 QIDLRRANDTEIMLTKVNIPLADMMAAVLGMDEYVLDVDQIENLIRFCPTKEEMELLKNY 528
Query: 82 TGDKEMLGKCEQ------------------------FFLELMKVPRVEAKLRVFAFRITF 117
TGDK LGKCEQ +FLE+MKVP VE+KLR F+F+I F
Sbjct: 529 TGDKATLGKCEQLAKAKAPLKEHFRVINAFPSLTPQYFLEVMKVPGVESKLRAFSFKIQF 588
Query: 118 STQVDDLRCNLNTINNAAREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLK 177
TQ+ +L LN +N+A EV+ S KL++IM IL +GN LNQGTA GSAVGFKL SLL
Sbjct: 589 GTQIAELNKGLNAVNSACEEVRTSEKLKEIMANILCMGNILNQGTAEGSAVGFKLKSLLI 648
Query: 178 LSDTRARNNKMTLMHYLCKV 197
LSDT A N+KMTLMHYLCKV
Sbjct: 649 LSDTCAPNSKMTLMHYLCKV 668
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/227 (44%), Positives = 127/227 (55%), Gaps = 56/227 (24%)
Query: 27 RAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYTGDKE 86
RA N I L+ +PLP+M+ AVLA+D S +D+DQ+E LIKFCPT EEME LK YTGDK
Sbjct: 134 RANNKVINLS---MPLPDMMTAVLAMDESVVDVDQIEKLIKFCPTNEEMELLKTYTGDKA 190
Query: 87 MLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESAKLRQ 146
LGK EQ+ LELMKVPR+EAKLRVF+F+ F T++ +L+ LN + +A EV+ S KL++
Sbjct: 191 ALGKYEQYLLELMKVPRLEAKLRVFSFKTQFGTKITELKERLNVVTSACEEVRSSEKLKE 250
Query: 147 IMQTILTLGNALNQGTARGSA----------------------------------VGFKL 172
IM+ I LGN NQG RG + VG KL
Sbjct: 251 IMKKIPCLGNTSNQGPDRGKSSVVDKNLSFSSGIQLKEIMKKIPCLGNTSKSNPRVGVKL 310
Query: 173 DSLLKLSDTRARNNKMTLMHYLCKV-------------DLQNLNSES 206
DS +SDT + MHY CKV DLQ+L S S
Sbjct: 311 DS--SVSDTHTVKS----MHYYCKVLASEASELLDVYKDLQSLESAS 351
>AT5G07780.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr5:2479707-2482638 FORWARD
Length = 464
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 131/179 (73%), Gaps = 7/179 (3%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLD-IDQVENLIKFCPTKEEMETLKNY 81
+DLRRA N EI L + + LP+MI A +A+D S LD DQ+ENLI PTKE+M+ L Y
Sbjct: 145 IDLRRATNTEIRLMLLNIRLPDMIAAAMAMDESRLDDFDQIENLINLFPTKEDMKFLLTY 204
Query: 82 TGDKEMLGKCEQFFL---ELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREV 138
TGDK G CEQ F E++KVPRVE+KLRVF+F+I F TQ+ L LN +N+A E+
Sbjct: 205 TGDK---GNCEQLFQYLQEVVKVPRVESKLRVFSFKIQFGTQITKLTKGLNAVNSACEEI 261
Query: 139 KESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV 197
+ S KL+ IM+ IL LGN LNQGT RG AVGF+LDSLL LS+TRA N+KMTLMHYLCKV
Sbjct: 262 RTSQKLKDIMENILCLGNILNQGTGRGRAVGFRLDSLLILSETRADNSKMTLMHYLCKV 320
>AT1G42980.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr1:16133344-16135456 FORWARD
Length = 299
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 126/185 (68%), Gaps = 18/185 (9%)
Query: 28 AYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYTG-DKE 86
A NCE ML+KIK+PLP+M+NAVL LDSS++ IDQ++NLIK C +KEEM+ L+N G DKE
Sbjct: 2 ASNCEKMLSKIKIPLPDMLNAVLDLDSSAVIIDQIKNLIKICWSKEEMDRLRNSAGGDKE 61
Query: 87 MLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESAKLRQ 146
+LGKCE+ F ELM VPR+E KLRVFAF++ + ++V DL+ ++TI A +E+ S KL +
Sbjct: 62 VLGKCEEIFGELMMVPRIEPKLRVFAFKVEYPSRVSDLKMWMHTIIAATKEITGSVKLFR 121
Query: 147 IMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKV-----DLQN 201
IMQT LT+ RGS V LDSL+KL D + LMH CK+ DL +
Sbjct: 122 IMQTSLTM------QVLRGSNVECGLDSLVKLCDN------VYLMHDFCKLLDFGNDLVH 169
Query: 202 LNSES 206
L + S
Sbjct: 170 LEAAS 174
>AT5G67470.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr5:26926835-26930212 FORWARD
Length = 899
Score = 114 bits (284), Expect = 6e-26, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 98/174 (56%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D +++ N I+L + V E+ A+ + SL + +E L+K PTKEE L+ Y+
Sbjct: 527 LDPKKSQNIAILLRALNVTREEVSEALTDGNPESLGAELLETLVKMAPTKEEEIKLREYS 586
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
GD LG E+F ++ +P ++ +R F +V LR + T+ A+ E+K S
Sbjct: 587 GDVSKLGTAERFLKTILDIPFAFKRVEAMLYRANFDAEVKYLRNSFQTLEEASLELKASR 646
Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
++++ +L GN +N GT RG A+ FKLD+LLKL D + + K TL+H++ +
Sbjct: 647 LFLKLLEAVLMTGNRMNVGTNRGDAIAFKLDTLLKLVDIKGVDGKTTLLHFVVQ 700
>AT3G25500.1 | Symbols: AFH1, FH1, AHF1, ATFH1 | AFH1 (FORMIN
HOMOLOGY 1); actin binding / actin filament binding /
protein binding | chr3:9251320-9254826 REVERSE
Length = 1051
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D ++A N I+L + V + E+ A+L ++ +L + +E+L+K PTKEE LK Y
Sbjct: 665 LDPKKAQNIAILLRALNVTIEEVCEALLEGNADTLGTELLESLLKMAPTKEEERKLKAYN 724
Query: 83 GDKEM-LGKCEQFFLELMKVP----RVEAKLRVFAFRITFSTQVDDLRCNLNTINNAARE 137
D + LG E+F ++ +P RV+A L V F ++V+ L+ + T+ A E
Sbjct: 725 DDSPVKLGHAEKFLKAMLDIPFAFKRVDAMLYV----ANFESEVEYLKKSFETLEAACEE 780
Query: 138 VKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
++ S ++++ +L GN +N GT RG A FKLD+LLKL D + + K TL+H++ +
Sbjct: 781 LRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQ 839
>AT2G43800.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr2:18145721-18148721 FORWARD
Length = 894
Score = 102 bits (254), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 100/178 (56%), Gaps = 4/178 (2%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D R+++N I+L + V E+ A++ +S +L + +E L+K PTKEE + LK
Sbjct: 509 LDPRKSHNIAILLRALNVTADEVCEALIEGNSDTLGPELLECLLKMAPTKEEEDKLKELK 568
Query: 83 GDKE----MLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREV 138
D + +G E+F L+ +P ++ + + F ++++ L + +T+ A E+
Sbjct: 569 DDDDGSPSKIGPAEKFLKALLNIPFAFKRIDAMLYIVKFESEIEYLNRSFDTLEAATGEL 628
Query: 139 KESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
K + ++++ +L GN +N GT RG A FKLD+LLKL D + + K TL+H++ +
Sbjct: 629 KNTRMFLKLLEAVLKTGNRMNIGTNRGDAHAFKLDTLLKLVDIKGADGKTTLLHFVVQ 686
>AT3G05470.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr3:1579667-1582547 REVERSE
Length = 884
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 5/185 (2%)
Query: 12 TKLPGFCFLLQVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPT 71
T PG L + +R N I+L + ++ +A+ L + Q+E L+K PT
Sbjct: 525 TPSPGKHLL---EPKRLQNFTILLKALNATADQICSALGK--GEGLCLQQLEALVKMVPT 579
Query: 72 KEEMETLKNYTGDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTI 131
KEE L++Y G + LG E+F L+ VP + +R TF +V LR + + +
Sbjct: 580 KEEELKLRSYKGAVDELGSAEKFLRALVGVPFAFQRAEAMLYRETFEDEVVHLRNSFSML 639
Query: 132 NNAAREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLM 191
A +E+K S ++++ +L GN +N GT RG A FKLD+LLKLSD + + K TL+
Sbjct: 640 EEACKELKSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDALLKLSDVKGTDGKTTLL 699
Query: 192 HYLCK 196
H++ +
Sbjct: 700 HFVVQ 704
>AT4G15200.1 | Symbols: | actin binding | chr4:8663486-8665759
REVERSE
Length = 605
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 96/173 (55%), Gaps = 18/173 (10%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D R+A N I+L + V E+++A+ + + L ++ ++ L+K PT EE L+ Y+
Sbjct: 397 IDTRKAQNLSILLRALNVTTEEVVDAIK--EGNELPVELLQTLLKMAPTSEEELKLRLYS 454
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
GD +LG PR E+ L F I+ +V L+ L T+ A ++++ S
Sbjct: 455 GDLHLLG------------PRSESLL----FMISLQEEVSGLKEALGTLEVACKKLRNSR 498
Query: 143 KLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLC 195
++++ +L GN +N GT RG A FKLD+LLKLSD + + K TL+H++
Sbjct: 499 LFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVV 551
>AT1G70140.1 | Symbols: ATFH8 | ATFH8 (formin 8); actin binding /
actin filament binding / profilin binding |
chr1:26412688-26415048 REVERSE
Length = 760
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 95/175 (54%), Gaps = 3/175 (1%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D R++ N I+L + + E++ +++ + + D +E L + PTKEE + +
Sbjct: 369 LDPRKSQNTAIVLKSLGMTREELVESLI--EGNDFVPDTLERLARIAPTKEEQSAILEFD 426
Query: 83 GDKEMLGKCEQFFLELMK-VPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
GD L E F L+K VP +L F FR + ++ L T++ A +E++
Sbjct: 427 GDTAKLADAETFLFHLLKSVPTAFTRLNAFLFRANYYPEMAHHSKCLQTLDLACKELRSR 486
Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
++++ IL GN +N GTARG+A F L +LLKLSD ++ + K +L++++ +
Sbjct: 487 GLFVKLLEAILKAGNRMNAGTARGNAQAFNLTALLKLSDVKSVDGKTSLLNFVVE 541
>AT1G59910.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr1:22054167-22057052 REVERSE
Length = 929
Score = 90.1 bits (222), Expect = 8e-19, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D R++ N I+L + + E+I+ L + + D +E L PT EE + ++
Sbjct: 531 LDPRKSQNKAIVLKSLGMTKEEIID--LLTEGHDAESDTLEKLAGIAPTPEEQTEIIDFD 588
Query: 83 GDKEMLGKCEQFFLELMK-VPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
G+ L + ++K VP + V F+I + ++V + +L T+ +A E++
Sbjct: 589 GEPMTLAYADSLLFHILKAVPSAFNRFNVMLFKINYGSEVAQQKGSLLTLESACNELRAR 648
Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYL 194
++++ IL GN +N GTARG+A F L +L KLSD ++ + K TL+H++
Sbjct: 649 GLFMKLLEAILKAGNRMNAGTARGNAQAFNLTALRKLSDVKSVDAKTTLLHFV 701
>AT5G54650.2 | Symbols: Fh5, ATFH5 | Fh5 (FORMIN HOMOLOGY5); actin
binding | chr5:22197856-22201649 REVERSE
Length = 900
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 8 SNLTTKLPGFCFLLQVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIK 67
S+ LP F +L+ ++ N I+L + E+ +A+ + + L ++ ++ L+K
Sbjct: 495 SSGQAALPQFVQILEP--KKGQNLSILLRALNATTEEVCDALR--EGNELPVEFIQTLLK 550
Query: 68 FCPTKEEMETLKNYTGDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCN 127
PT EE L+ Y G+ LG E+F ++ +P +L F T ++ ++ +
Sbjct: 551 MAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKES 610
Query: 128 LNTINNAAREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNK 187
+ A +E++ S ++++ +L GN +N GT RG A FKLD+LLKL+D + + K
Sbjct: 611 FQKLEVACKELRGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGK 670
Query: 188 MTLMHYLCK 196
TL+H++ +
Sbjct: 671 TTLLHFVVQ 679
>AT5G54650.1 | Symbols: Fh5, ATFH5 | Fh5 (FORMIN HOMOLOGY5); actin
binding | chr5:22197856-22201649 REVERSE
Length = 900
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 8 SNLTTKLPGFCFLLQVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIK 67
S+ LP F +L+ ++ N I+L + E+ +A+ + + L ++ ++ L+K
Sbjct: 495 SSGQAALPQFVQILEP--KKGQNLSILLRALNATTEEVCDALR--EGNELPVEFIQTLLK 550
Query: 68 FCPTKEEMETLKNYTGDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCN 127
PT EE L+ Y G+ LG E+F ++ +P +L F T ++ ++ +
Sbjct: 551 MAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKES 610
Query: 128 LNTINNAAREVKESAKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNK 187
+ A +E++ S ++++ +L GN +N GT RG A FKLD+LLKL+D + + K
Sbjct: 611 FQKLEVACKELRGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGK 670
Query: 188 MTLMHYLCK 196
TL+H++ +
Sbjct: 671 TTLLHFVVQ 679
>AT5G48360.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr5:19595716-19598331 FORWARD
Length = 782
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D R+A N +L + + ++ A+L D L + +E L + P+KEE LK+++
Sbjct: 470 LDPRKAQNIATLLQLLNLSTKDVCQALLDGDCDVLGAELLECLSRLAPSKEEERKLKSFS 529
Query: 83 GDKEMLGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKESA 142
E +G E+F EL+ VP V ++ F F +++ LR + + + A E++ S
Sbjct: 530 DGSE-IGPAERFLKELLHVPFVFKRVDALLFVANFHSEIKRLRKSFSVVQVACEELRNSR 588
Query: 143 KLRQIMQTILTLGNALNQGTAR-GSAVGFKLDSLLKLSDTRARNNKMTLMHYLCK 196
+++ IL GN ++ T R G A FKLD+LLKL D + + + +L+H++ +
Sbjct: 589 MFSILLEAILKTGNMMSVRTNRCGDADAFKLDTLLKLVDVKGLDGRSSLLHFVVQ 643
>AT3G07540.1 | Symbols: | formin homology 2 domain-containing
protein / FH2 domain-containing protein |
chr3:2404763-2407464 REVERSE
Length = 841
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 23 VDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEEMETLKNYT 82
+D R++ N ++LT +K+ ++ A+ +L ++ +E+L + P++EE + L +Y+
Sbjct: 528 LDPRKSQNVAVLLTTLKLTTNDVCQALRDGHYDALGVELLESLARVAPSEEEEKKLISYS 587
Query: 83 GDKEM-LGKCEQFFLELMKVPRVEAKLRVFAFRITFSTQVDDLRCNLNTINNAAREVKES 141
D + L E+F EL+ VP V ++ +F ++V L+ + + I A ++ S
Sbjct: 588 DDSVIKLAPSERFLKELLNVPFVFKRVDALLSVASFDSKVKHLKRSFSVIQAACEALRNS 647
Query: 142 AKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLM 191
L ++ +G L G G+A FKL++LL L D ++ + + +++
Sbjct: 648 RMLLRL------VGATLEAGMKSGNAHDFKLEALLGLVDIKSSDGRTSIL 691
>AT1G24150.1 | Symbols: ATFH4, FH4 | FH4 (FORMIN HOMOLOGUE 4); actin
binding / protein binding | chr1:8549518-8551910 FORWARD
Length = 725
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 15 PGFCFLLQVDLRRAYNCEIMLTKIKVPLPEMINAVLALDSSSLDIDQVENLIKFCPTKEE 74
P F+L D R++ N I+L + + E++ +++ + D +E L + PTKEE
Sbjct: 373 PAQIFIL--DPRKSQNTAIVLKSLGMTRDELVESLM--EGHDFHPDTLERLSRIAPTKEE 428
Query: 75 METLKNYTGDKEMLGKCEQFFLELMK-VPRVEAKLRVFAFRITFSTQVDDLRCNLNTINN 133
+ + GD +ML E F L+K VP +L FR + ++ + NL T++
Sbjct: 429 QSAILQFDGDTKMLADAESFLFHLLKAVPCAFTRLNALLFRANYYPEISNHNKNLQTLDL 488
Query: 134 AAREVK 139
A E++
Sbjct: 489 ACTELR 494