Jatropha Genome Database

JcCB0045301.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0045301.20 + phase: 2 /pseudo/partial
         (106 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22330.1 | Symbols: CYP79B3 | CYP79B3; electron carrier/ heme...    72   1e-13
AT5G05260.1 | Symbols: CYP79A2 | CYP79A2 (CYTOCHROME P450 79A2);...    70   2e-13
AT5G35917.1 | Symbols: CYP79A3P | CYP79A3P; electron carrier/ he...    66   5e-12
AT4G39950.1 | Symbols: CYP79B2 | CYP79B2; electron carrier/ heme...    63   4e-11
AT1G79370.1 | Symbols: CYP79C1 | CYP79C1; electron carrier/ heme...    54   2e-08
AT1G16400.1 | Symbols: CYP79F2 | CYP79F2; oxidoreductase, acting...    51   1e-07
AT1G58260.1 | Symbols: CYP79C2, CYP79C3P | CYP79C2 (CYTOCHROME P...    47   3e-06

>AT2G22330.1 | Symbols: CYP79B3 | CYP79B3; electron carrier/ heme
           binding / iron ion binding / monooxygenase/ oxygen
           binding | chr2:9488601-9490983 FORWARD
          Length = 543

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 4/73 (5%)

Query: 38  SKESCS*RTSKNLPVPP----WPVMGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRT 93
           +K   S R  K  P+PP    +P++G IP M++ RP FRW++  MKE+ T+I  +RLG T
Sbjct: 44  NKIKSSSRNKKLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNT 103

Query: 94  NVIPVNCPITASD 106
           +VIPV CP  A +
Sbjct: 104 HVIPVTCPKIARE 116


>AT5G05260.1 | Symbols: CYP79A2 | CYP79A2 (CYTOCHROME P450 79A2);
           oxidoreductase, acting on paired donors, with
           incorporation or reduction of molecular oxygen, NADH or
           NADPH as one donor, and incorporation of one atom of
           oxygen / oxygen binding | chr5:1559778-1561765 REVERSE
          Length = 523

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 5/76 (6%)

Query: 36  KTSKESCS*RTSKNLPVPP----WPVMGNIPEMI-RYRPTFRWVYQFMKEMKTDICLIRL 90
           K  K++     ++NL +PP    WP++GN+PE++ R +P FRW++  MKE+ TDI  IRL
Sbjct: 18  KEKKKTMLISPTRNLSLPPGPKSWPLIGNLPEILGRNKPVFRWIHSLMKELNTDIACIRL 77

Query: 91  GRTNVIPVNCPITASD 106
             T+VIPV  P  A +
Sbjct: 78  ANTHVIPVTSPRIARE 93


>AT5G35917.1 | Symbols: CYP79A3P | CYP79A3P; electron carrier/ heme
           binding / iron ion binding / monooxygenase |
           chr5:14049123-14051128 FORWARD
          Length = 490

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 5/65 (7%)

Query: 47  SKNLPVPP----WPVMGNIPEMI-RYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCP 101
           ++NL +PP    WP++GN+PE++ R +P FRW++  M+E+ TDI  IRL  T+VIPV  P
Sbjct: 37  TRNLSLPPGPKSWPLVGNLPEILGRNKPVFRWIHSLMEELNTDIACIRLANTHVIPVTSP 96

Query: 102 ITASD 106
             A +
Sbjct: 97  RIARE 101


>AT4G39950.1 | Symbols: CYP79B2 | CYP79B2; electron carrier/ heme
           binding / iron ion binding / monooxygenase/ oxygen
           binding | chr4:18525311-18527284 FORWARD
          Length = 541

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 37/52 (71%)

Query: 55  WPVMGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCPITASD 106
           WP++G IP M++ RP FRW++  MK++ T+I  ++LG T+VI V CP  A +
Sbjct: 63  WPIIGMIPTMLKSRPVFRWLHSIMKQLNTEIACVKLGNTHVITVTCPKIARE 114


>AT1G79370.1 | Symbols: CYP79C1 | CYP79C1; electron carrier/ heme
           binding / iron ion binding / monooxygenase/ oxygen
           binding | chr1:29857934-29860163 FORWARD
          Length = 546

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 48  KNLPVPP--WPVMGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCPITAS 105
           K LP  P  +P++GN+  M++ RPT +W+ + M +MKTDI   R GR +VI +   + A 
Sbjct: 38  KKLPPCPRGFPIIGNLVGMLKNRPTSKWIVRVMNDMKTDIACFRFGRVHVIVITSDVIAR 97

Query: 106 D 106
           +
Sbjct: 98  E 98


>AT1G16400.1 | Symbols: CYP79F2 | CYP79F2; oxidoreductase, acting
          on paired donors, with incorporation or reduction of
          molecular oxygen, NADH or NADPH as one donor, and
          incorporation of one atom of oxygen / oxygen binding |
          chr1:5605231-5607281 FORWARD
          Length = 537

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query: 53 PPWPVMGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVN 99
          P WP++GN+PE+I  RP  ++ +  MKE+KTDI       T+ I +N
Sbjct: 49 PGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITIN 95


>AT1G58260.1 | Symbols: CYP79C2, CYP79C3P | CYP79C2 (CYTOCHROME P450
           79C2); electron carrier/ heme binding / iron ion binding
           / monooxygenase/ oxygen binding | chr1:21605752-21607995
           FORWARD
          Length = 530

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 32/52 (61%)

Query: 55  WPVMGNIPEMIRYRPTFRWVYQFMKEMKTDICLIRLGRTNVIPVNCPITASD 106
           WP++GN+ +MI  RP   W+++ M+E++TDI   R  R +VI V     A +
Sbjct: 44  WPIVGNMLQMIINRPAHLWIHRVMEELQTDIACYRFARFHVITVTSSKIARE 95