Jatropha Genome Database

JcCB0044401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044401.10 + phase: 0 /partial/short
         (43 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14415.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    80   2e-16
AT3G14420.3 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    78   1e-15
AT3G14420.2 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    78   1e-15
AT3G14420.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    78   1e-15
AT3G14420.4 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    78   1e-15
AT3G14420.5 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    77   2e-15
AT3G14420.6 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    77   2e-15
AT4G18360.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    69   4e-13
AT3G14150.2 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    47   2e-06
AT3G14150.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    47   2e-06
AT3G14130.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisoma...    47   3e-06

>AT3G14415.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4818667-4820748 FORWARD
          Length = 367

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/43 (83%), Positives = 39/43 (90%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLPRPVPRL 43
           KVLQMLR+EFELTMALSGCRSL EITRNHIV +WD PR +PRL
Sbjct: 325 KVLQMLRDEFELTMALSGCRSLSEITRNHIVTEWDTPRHLPRL 367


>AT3G14420.3 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4821804-4823899 FORWARD
          Length = 367

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLPRPVPRL 43
           KVLQMLR+EFELTMALSGCRSL+EI+RNHI  +WD PRP  RL
Sbjct: 325 KVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDTPRPSARL 367


>AT3G14420.2 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4821804-4823899 FORWARD
          Length = 367

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLPRPVPRL 43
           KVLQMLR+EFELTMALSGCRSL+EI+RNHI  +WD PRP  RL
Sbjct: 325 KVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDTPRPSARL 367


>AT3G14420.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4821804-4823899 FORWARD
          Length = 367

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLPRPVPRL 43
           KVLQMLR+EFELTMALSGCRSL+EI+RNHI  +WD PRP  RL
Sbjct: 325 KVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDTPRPSARL 367


>AT3G14420.4 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4821861-4823899 FORWARD
          Length = 348

 Score = 77.8 bits (190), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLPRPVPRL 43
           KVLQMLR+EFELTMALSGCRSL+EI+RNHI  +WD PRP  RL
Sbjct: 306 KVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDTPRPSARL 348


>AT3G14420.5 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4821829-4823899 FORWARD
          Length = 360

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLPRPVPRL 43
           KVLQMLR+EFELTMALSGCRSL+EI+RNHI  +WD PRP  RL
Sbjct: 318 KVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDTPRPSARL 360


>AT3G14420.6 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4821899-4823899 FORWARD
          Length = 366

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/43 (79%), Positives = 38/43 (88%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLPRPVPRL 43
           KVLQMLR+EFELTMALSGCRSL+EI+RNHI  +WD PRP  RL
Sbjct: 324 KVLQMLRDEFELTMALSGCRSLKEISRNHITTEWDTPRPSARL 366


>AT4G18360.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr4:10146141-10148386 REVERSE
          Length = 368

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/37 (81%), Positives = 33/37 (89%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHIVADWDLP 37
           K+LQMLR+EFELTMALSGCRSLREI+R HI  DWD P
Sbjct: 325 KMLQMLRDEFELTMALSGCRSLREISRTHIKTDWDTP 361


>AT3G14150.2 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4690667-4692679 REVERSE
          Length = 363

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/30 (63%), Positives = 26/30 (86%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHI 30
           KV+ ML+ EFE+TMALSGC ++ +ITRNH+
Sbjct: 323 KVIDMLKNEFEITMALSGCPTIDDITRNHV 352


>AT3G14150.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4690667-4692679 REVERSE
          Length = 363

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/30 (63%), Positives = 26/30 (86%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHI 30
           KV+ ML+ EFE+TMALSGC ++ +ITRNH+
Sbjct: 323 KVIDMLKNEFEITMALSGCPTIDDITRNHV 352


>AT3G14130.1 | Symbols:  | (S)-2-hydroxy-acid oxidase, peroxisomal,
           putative / glycolate oxidase, putative / short chain
           alpha-hydroxy acid oxidase, putative |
           chr3:4685844-4687852 REVERSE
          Length = 363

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/30 (60%), Positives = 26/30 (86%)

Query: 1   KVLQMLREEFELTMALSGCRSLREITRNHI 30
           KV+ ML+ EFE+TMALSGC ++ ++TRNH+
Sbjct: 323 KVIDMLKNEFEITMALSGCPTIDDVTRNHV 352