Jatropha Genome Database

JcCB0044081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0044081.10 - phase: 0 /pseudo/partial
         (502 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...   529   e-150
AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...   528   e-150
AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2)...   528   e-150
AT1G60440.1 | Symbols: ATCOAA, ATPANK1 | ATPANK1 (PANTOTHENATE K...   202   4e-52

>AT4G32180.1 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15537724-15543715 REVERSE
          Length = 901

 Score =  529 bits (1362), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 261/307 (85%), Positives = 270/307 (87%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDN  IDMLVGDIYGGMDYSKIGLSASTIASSFGK IS+ KEL+DYRPE
Sbjct: 286 SFDELLELSQKGDNSAIDMLVGDIYGGMDYSKIGLSASTIASSFGKAISENKELDDYRPE 345

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQISYLNA                 HAYTMDTISFAVHFWSKGE Q
Sbjct: 346 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEMQ 405

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKIS 375
           AMFLRHEGFLGALGAFMSYEKHGLDDLM HQLVERFPMGAPYTGG IHGPPLGDL+EKIS
Sbjct: 406 AMFLRHEGFLGALGAFMSYEKHGLDDLMSHQLVERFPMGAPYTGGNIHGPPLGDLDEKIS 465

Query: 376 WMEKFVLKGTEITAPVPMAPPGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTLDVF 435
           WMEKFV +GTEITAPVPM P  TTGLGGFEVPSS+G  LRSDASALNVGVLHLVPTL+VF
Sbjct: 466 WMEKFVRRGTEITAPVPMTPSKTTGLGGFEVPSSRGSALRSDASALNVGVLHLVPTLEVF 525

Query: 436 PLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRRGDAFARA 495
           PLLADPK YEPNTIDLSD  E EYW  VLSEH+PDLVD AVASEGGT+DAKRRGDAFARA
Sbjct: 526 PLLADPKTYEPNTIDLSDQGEREYWLKVLSEHLPDLVDTAVASEGGTEDAKRRGDAFARA 585

Query: 496 FSAHLAR 502
           FSAHLAR
Sbjct: 586 FSAHLAR 592



 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 66/73 (90%), Gaps = 1/73 (1%)

Query: 1   MAGSLIKLVYFSRHEDRSIND-KRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKIN 59
           + GSLIKL+YFSRHED S +D KRK+T+KERLGI+NGN RSYP+LGGRLHFVKFET KIN
Sbjct: 84  IGGSLIKLLYFSRHEDYSNDDDKRKRTIKERLGITNGNLRSYPVLGGRLHFVKFETHKIN 143

Query: 60  ECLDFISSKQLHR 72
           ECLDFI SKQLHR
Sbjct: 144 ECLDFIHSKQLHR 156


>AT4G32180.3 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 261/307 (85%), Positives = 270/307 (87%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDN  IDMLVGDIYGGMDYSKIGLSASTIASSFGK IS+ KEL+DYRPE
Sbjct: 286 SFDELLELSQKGDNSAIDMLVGDIYGGMDYSKIGLSASTIASSFGKAISENKELDDYRPE 345

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQISYLNA                 HAYTMDTISFAVHFWSKGE Q
Sbjct: 346 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEMQ 405

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKIS 375
           AMFLRHEGFLGALGAFMSYEKHGLDDLM HQLVERFPMGAPYTGG IHGPPLGDL+EKIS
Sbjct: 406 AMFLRHEGFLGALGAFMSYEKHGLDDLMSHQLVERFPMGAPYTGGNIHGPPLGDLDEKIS 465

Query: 376 WMEKFVLKGTEITAPVPMAPPGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTLDVF 435
           WMEKFV +GTEITAPVPM P  TTGLGGFEVPSS+G  LRSDASALNVGVLHLVPTL+VF
Sbjct: 466 WMEKFVRRGTEITAPVPMTPSKTTGLGGFEVPSSRGSALRSDASALNVGVLHLVPTLEVF 525

Query: 436 PLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRRGDAFARA 495
           PLLADPK YEPNTIDLSD  E EYW  VLSEH+PDLVD AVASEGGT+DAKRRGDAFARA
Sbjct: 526 PLLADPKTYEPNTIDLSDQGEREYWLKVLSEHLPDLVDTAVASEGGTEDAKRRGDAFARA 585

Query: 496 FSAHLAR 502
           FSAHLAR
Sbjct: 586 FSAHLAR 592



 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 66/73 (90%), Gaps = 1/73 (1%)

Query: 1   MAGSLIKLVYFSRHEDRSIND-KRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKIN 59
           + GSLIKL+YFSRHED S +D KRK+T+KERLGI+NGN RSYP+LGGRLHFVKFET KIN
Sbjct: 84  IGGSLIKLLYFSRHEDYSNDDDKRKRTIKERLGITNGNLRSYPVLGGRLHFVKFETHKIN 143

Query: 60  ECLDFISSKQLHR 72
           ECLDFI SKQLHR
Sbjct: 144 ECLDFIHSKQLHR 156


>AT4G32180.2 | Symbols: ATPANK2 | ATPANK2 (PANTOTHENATE KINASE 2);
           pantothenate kinase | chr4:15538340-15543715 REVERSE
          Length = 783

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 261/307 (85%), Positives = 270/307 (87%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELSQ+GDN  IDMLVGDIYGGMDYSKIGLSASTIASSFGK IS+ KEL+DYRPE
Sbjct: 286 SFDELLELSQKGDNSAIDMLVGDIYGGMDYSKIGLSASTIASSFGKAISENKELDDYRPE 345

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           DISLSLLRMISYNIGQISYLNA                 HAYTMDTISFAVHFWSKGE Q
Sbjct: 346 DISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGEMQ 405

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKIS 375
           AMFLRHEGFLGALGAFMSYEKHGLDDLM HQLVERFPMGAPYTGG IHGPPLGDL+EKIS
Sbjct: 406 AMFLRHEGFLGALGAFMSYEKHGLDDLMSHQLVERFPMGAPYTGGNIHGPPLGDLDEKIS 465

Query: 376 WMEKFVLKGTEITAPVPMAPPGTTGLGGFEVPSSQGRTLRSDASALNVGVLHLVPTLDVF 435
           WMEKFV +GTEITAPVPM P  TTGLGGFEVPSS+G  LRSDASALNVGVLHLVPTL+VF
Sbjct: 466 WMEKFVRRGTEITAPVPMTPSKTTGLGGFEVPSSRGSALRSDASALNVGVLHLVPTLEVF 525

Query: 436 PLLADPKMYEPNTIDLSDHKELEYWFTVLSEHMPDLVDKAVASEGGTDDAKRRGDAFARA 495
           PLLADPK YEPNTIDLSD  E EYW  VLSEH+PDLVD AVASEGGT+DAKRRGDAFARA
Sbjct: 526 PLLADPKTYEPNTIDLSDQGEREYWLKVLSEHLPDLVDTAVASEGGTEDAKRRGDAFARA 585

Query: 496 FSAHLAR 502
           FSAHLAR
Sbjct: 586 FSAHLAR 592



 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 66/73 (90%), Gaps = 1/73 (1%)

Query: 1   MAGSLIKLVYFSRHEDRSIND-KRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKIN 59
           + GSLIKL+YFSRHED S +D KRK+T+KERLGI+NGN RSYP+LGGRLHFVKFET KIN
Sbjct: 84  IGGSLIKLLYFSRHEDYSNDDDKRKRTIKERLGITNGNLRSYPVLGGRLHFVKFETHKIN 143

Query: 60  ECLDFISSKQLHR 72
           ECLDFI SKQLHR
Sbjct: 144 ECLDFIHSKQLHR 156


>AT1G60440.1 | Symbols: ATCOAA, ATPANK1 | ATPANK1 (PANTOTHENATE
           KINASE 1); pantothenate kinase | chr1:22266653-22269070
           REVERSE
          Length = 383

 Score =  202 bits (514), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 110/178 (61%), Positives = 124/178 (69%), Gaps = 2/178 (1%)

Query: 196 SFDELLELSQRGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISDKKELEDYRPE 255
           SFDELLELS  G+NR IDMLVGDIYGG DYSKIGLS++ IASSFGK ISD KELEDY+PE
Sbjct: 196 SFDELLELSHHGNNRVIDMLVGDIYGGTDYSKIGLSSTAIASSFGKAISDGKELEDYQPE 255

Query: 256 DISLSLLRMISYNIGQISYLNAXXXXXXXXXXXXXXXXXHAYTMDTISFAVHFWSKGEAQ 315
           D++ SLLRMIS NIGQI+YLNA                   YTMDTIS AVHFWS+GEA+
Sbjct: 256 DVARSLLRMISNNIGQIAYLNALRFGLKRIFFGGFFIRGLEYTMDTISVAVHFWSRGEAK 315

Query: 316 AMFLRHEGFLGALGAFMSYEKHGLDDLMV-HQLVERFPMGAPYTGGKIHGPPLGDLNE 372
           AMFLRHEGFLGALGAF SY     +DL   H  V+R  +       + H P   +LNE
Sbjct: 316 AMFLRHEGFLGALGAFTSYNDQSHNDLKPHHHTVQRAILNCSGHNFR-HIPVTSNLNE 372



 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 16/74 (21%)

Query: 1  MAGSLIKLVYFSRHEDRSINDKRKKTVKERLGISNGNRRSYPILGGRLHFVKFETRKINE 60
          + G+LIKLVYFS + D                 S  +R    ++ GRL F KFETRKI++
Sbjct: 13 IGGTLIKLVYFSANGD----------------YSEESRNGCSVVKGRLCFAKFETRKIDD 56

Query: 61 CLDFISSKQLHRGG 74
          CL+FI    LH  G
Sbjct: 57 CLEFIRFNILHHSG 70