Jatropha Genome Database

JcCB0041131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0041131.10 + phase: 0 /pseudo
         (234 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32710.2 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /...    91   6e-19
AT2G32710.1 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /...    89   2e-18
AT5G48820.1 | Symbols: KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR W...    76   2e-14

>AT2G32710.2 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /
           cyclin-dependent protein kinase inhibitor |
           chr2:13873496-13875350 FORWARD
          Length = 286

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 93/188 (49%), Gaps = 30/188 (15%)

Query: 56  YLQLRSRRLVKPPTLV--NDSKRQKQSQNKE--AQNPNPNXXXXXXXXXXXXXXXXQKNE 111
           YLQLRSRRL K P +V    +KR+KQ +  E   +NPNP                  ++ 
Sbjct: 102 YLQLRSRRLQKKPPIVVIRSTKRRKQQRRNETCGRNPNPRSNLDSIRGDGSRSDSVSESV 161

Query: 112 VSGENKEEVQXXXXXXXXXXXXXXXXXXXXLGIEASFGENVLDIE--GRERSTRESTPCS 169
           V G++K+ +                     +  + +FG+N  D+E    +R+TRESTPCS
Sbjct: 162 VFGKDKDLISE-------------------INKDPTFGQNFFDLEEEHTQRTTRESTPCS 202

Query: 170 LIRDPEXXXXXXXXXXXXXXXXXXXXIQNS---AHRHIPTSLEMDEFFARAEEEQQRQFI 226
           LIR PE                     ++S   +HR  PT+ EMDEFF+ AEEEQQ+QFI
Sbjct: 203 LIRRPEIMTTPGSSTKLNICVSESNQREDSLSRSHRRRPTTPEMDEFFSGAEEEQQKQFI 262

Query: 227 EKXIYSFN 234
           EK  Y+F+
Sbjct: 263 EK--YNFD 268


>AT2G32710.1 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /
           cyclin-dependent protein kinase inhibitor |
           chr2:13873496-13875350 FORWARD
          Length = 289

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 92/191 (48%), Gaps = 33/191 (17%)

Query: 56  YLQLRSRRLVKPPTLV--NDSKRQKQSQNKE--AQNPNPNXXXXXXXXXXXXXXXXQKNE 111
           YLQLRSRRL K P +V    +KR+KQ +  E   +NPNP                  ++ 
Sbjct: 102 YLQLRSRRLQKKPPIVVIRSTKRRKQQRRNETCGRNPNPRSNLDSIRGDGSRSDSVSESV 161

Query: 112 VSGENKEEVQXXXXXXXXXXXXXXXXXXXXLGIEASFGENVLDIE-----GRERSTREST 166
           V G++K+ +                     +  + +FG+N  D+E        R+TREST
Sbjct: 162 VFGKDKDLISE-------------------INKDPTFGQNFFDLEEEHTQSFNRTTREST 202

Query: 167 PCSLIRDPEXXXXXXXXXXXXXXXXXXXXIQNS---AHRHIPTSLEMDEFFARAEEEQQR 223
           PCSLIR PE                     ++S   +HR  PT+ EMDEFF+ AEEEQQ+
Sbjct: 203 PCSLIRRPEIMTTPGSSTKLNICVSESNQREDSLSRSHRRRPTTPEMDEFFSGAEEEQQK 262

Query: 224 QFIEKXIYSFN 234
           QFIEK  Y+F+
Sbjct: 263 QFIEK--YNFD 271


>AT5G48820.1 | Symbols: KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR WITH
           CYCLIN-DEPENDENT KINASE); cyclin binding /
           cyclin-dependent protein kinase inhibitor |
           chr5:19792608-19794346 REVERSE
          Length = 222

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 102/243 (41%), Gaps = 52/243 (21%)

Query: 1   MRKAKTTGEVAVMDLS------LGVRTRA-KTLALQRQARLXXXXXXXXXXXXXXXXXXX 53
           M+K+K TG+++VM++S       GVRTRA KTLAL+R                       
Sbjct: 5   MKKSKITGDISVMEVSKATAPSPGVRTRAAKTLALKR---------LNSSAADSALPNDS 55

Query: 54  XXYLQLRSRRLVKPPTLVNDSK--RQKQSQNKEAQNPNPNXXXXXXXXXXXXXXXXQKNE 111
             YLQLRSRRL KP +L+   +  R  +S  KE                           
Sbjct: 56  SCYLQLRSRRLEKPSSLIEPKQPPRVHRSGIKE--------------------------- 88

Query: 112 VSGENKEEVQXXXXXXXXXXXXXXXXXXXXLGIEASFGENVLDIEGRERSTRESTPCSLI 171
            SG ++  V                     + ++ S GEN L  E R  STRESTPC+ +
Sbjct: 89  -SG-SRSRVDSVNSVPVAQSSNEDECFDNFVSVQVSCGENSLGFESRH-STRESTPCNFV 145

Query: 172 RDPEXXXXXXXXXXXXXXXXXXXXIQNSAHRHIPTSLEMDEFFARAEEEQQRQFIEKXIY 231
            D E                     +      IPT+ EM+EFFA AE++QQR F+EK  Y
Sbjct: 146 EDMEIMVTPGSSTRSMCRATKEYTREQ--DNVIPTTSEMEEFFAYAEQQQQRLFMEK--Y 201

Query: 232 SFN 234
           +F+
Sbjct: 202 NFD 204