Jatropha Genome Database

JcCB0039521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0039521.10 + phase: 0 
         (307 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51820.1 | Symbols: ATG4, G4, CHLG | G4; chlorophyll syntheta...   462   e-130
AT3G11945.2 | Symbols: ATHST | homogentisate farnesyltransferase...    56   2e-08
AT3G11945.1 | Symbols: ATHST | homogentisate farnesyltransferase...    56   2e-08
AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | HPT1 (HOMOGENTI...    52   6e-07

>AT3G51820.1 | Symbols: ATG4, G4, CHLG | G4; chlorophyll synthetase
           | chr3:19216301-19218934 REVERSE
          Length = 387

 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 222/279 (79%), Positives = 237/279 (84%)

Query: 15  NTWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWNLEDVAKSIVCMLMSGPFLTGYTQTL 74
           N WKIRLQLTKPVTWPPLVWGVVCGAAASGNFHW  EDVAKSI+CM+MSGP LTGYTQT+
Sbjct: 95  NKWKIRLQLTKPVTWPPLVWGVVCGAAASGNFHWTPEDVAKSILCMMMSGPCLTGYTQTI 154

Query: 75  NDYYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHNSPTVFYL 134
           ND+YDR+IDAINEPYRPIPSGAISE EVITQ+WV            DVWAGH +PTVFYL
Sbjct: 155 NDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTPTVFYL 214

Query: 135 ALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYISLPWWAGQALFGTLTPDIIVLTLLYS 194
           ALGGSLLSYIYSAPPLKLKQNGW+GNFALGASYISLPWWAGQALFGTLTPD++VLTLLYS
Sbjct: 215 ALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWWAGQALFGTLTPDVVVLTLLYS 274

Query: 195 IAGLGIAIVNDFKSIEGDRALGLQSLPVAFGAETAKWICVGAIDITQISIXXXXXXXXXX 254
           IAGLGIAIVNDFKS+EGDRALGLQSLPVAFG ETAKWICVGAIDITQ+S+          
Sbjct: 275 IAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDITQLSVAGYLLASGKP 334

Query: 255 XXXXXXXXXXXPQVFFQFQYFLKDPAKYDVKYQASAQPF 293
                      PQ+ FQF+YFLKDP KYDVKYQASAQPF
Sbjct: 335 YYALALVALIIPQIVFQFKYFLKDPVKYDVKYQASAQPF 373


>AT3G11945.2 | Symbols: ATHST | homogentisate farnesyltransferase/
           homogentisate geranylgeranyltransferase/ homogentisate
           solanesyltransferase | chr3:3780041-3782880 REVERSE
          Length = 393

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 36/213 (16%)

Query: 48  WNLEDVAKSIVCMLMSGPFLTGYTQTLNDYYDREIDAINEPYRPIPSGAISENEVITQIW 107
           W+L   A S +  L+ G    GY   +N  YD  ID +N+PY PI +G +S    +   W
Sbjct: 134 WSLVLKALSGLLALICG---NGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQSAW 186

Query: 108 VXXXXXXXXXXXXDVWAGHN-SPTVFYLALGGSLLSYIYSAPPLKLKQ------------ 154
           +             +  G N  P +  L   G  L  IYS PPL++K+            
Sbjct: 187 LLVIFFAIAGL---LVVGFNFGPFITSLYSLGLFLGTIYSVPPLRMKRFPVAAFLIIATV 243

Query: 155 NGWIGNFAL---GASYISLPW-WAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIE 210
            G++ NF +     + + LP+ W+    F         +T   ++  L IAI  D   +E
Sbjct: 244 RGFLLNFGVYHATRAALGLPFQWSAPVAF---------ITSFVTLFALVIAITKDLPDVE 294

Query: 211 GDRALGLQSLPVAFGAETAKWICVGAIDITQIS 243
           GDR   + +L    G     ++  G + +  +S
Sbjct: 295 GDRKFQISTLATKLGVRNIAFLGSGLLLVNYVS 327


>AT3G11945.1 | Symbols: ATHST | homogentisate farnesyltransferase/
           homogentisate geranylgeranyltransferase/ homogentisate
           solanesyltransferase | chr3:3780041-3782880 REVERSE
          Length = 386

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 36/213 (16%)

Query: 48  WNLEDVAKSIVCMLMSGPFLTGYTQTLNDYYDREIDAINEPYRPIPSGAISENEVITQIW 107
           W+L   A S +  L+ G    GY   +N  YD  ID +N+PY PI +G +S    +   W
Sbjct: 127 WSLVLKALSGLLALICG---NGYIVGINQIYDIGIDKVNKPYLPIAAGDLS----VQSAW 179

Query: 108 VXXXXXXXXXXXXDVWAGHN-SPTVFYLALGGSLLSYIYSAPPLKLKQ------------ 154
           +             +  G N  P +  L   G  L  IYS PPL++K+            
Sbjct: 180 LLVIFFAIAGL---LVVGFNFGPFITSLYSLGLFLGTIYSVPPLRMKRFPVAAFLIIATV 236

Query: 155 NGWIGNFAL---GASYISLPW-WAGQALFGTLTPDIIVLTLLYSIAGLGIAIVNDFKSIE 210
            G++ NF +     + + LP+ W+    F         +T   ++  L IAI  D   +E
Sbjct: 237 RGFLLNFGVYHATRAALGLPFQWSAPVAF---------ITSFVTLFALVIAITKDLPDVE 287

Query: 211 GDRALGLQSLPVAFGAETAKWICVGAIDITQIS 243
           GDR   + +L    G     ++  G + +  +S
Sbjct: 288 GDRKFQISTLATKLGVRNIAFLGSGLLLVNYVS 320


>AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | HPT1
           (HOMOGENTISATE PHYTYLTRANSFERASE 1); homogentisate
           phytyltransferase/ prenyltransferase |
           chr2:8207491-8210047 FORWARD
          Length = 393

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 24/199 (12%)

Query: 53  VAKSIVCMLMSGPFLTGYTQTLNDYYDREIDAINEPYRPIPSGAISENEVITQIWVXXXX 112
           + +++V  LM   ++ G    LN   D EID +N+PY P+ SG  S N  I  +      
Sbjct: 138 ILEAVVAALMMNIYIVG----LNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIV------ 187

Query: 113 XXXXXXXXDVWAG--HNSPTVFYLALGGSLLSYIYSA--PPLKLKQNGWIGN---FALGA 165
                     W G    S  +F+      +L   YS   P L+ K+   +      A+ A
Sbjct: 188 --ASFSIMSFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRA 245

Query: 166 SYISLPWWAG--QALFGT---LTPDIIVLTLLYSIAGLGIAIVNDFKSIEGDRALGLQSL 220
             + + ++      +FG     T  +I  T   S   + IA+  D   IEGD+  G++S 
Sbjct: 246 IIVQIAFYLHIQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSF 305

Query: 221 PVAFGAETAKWICVGAIDI 239
            V  G +   W CV  + +
Sbjct: 306 SVTLGQKRVFWTCVTLLQM 324