Jatropha Genome Database

JcCB0035141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0035141.10 - phase: 0 /partial
         (561 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19870.1 | Symbols: iqd32 | iqd32 (IQ-domain 32); calmodulin ...   236   3e-62

>AT1G19870.1 | Symbols: iqd32 | iqd32 (IQ-domain 32); calmodulin
           binding | chr1:6895400-6898539 REVERSE
          Length = 794

 Score =  236 bits (603), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 208/562 (37%), Positives = 290/562 (51%), Gaps = 96/562 (17%)

Query: 1   MESTPKSRPIHIKCDSSKPSSAWNWLERWISVSSAAPTPQPNLKTEEVERENKDENLFTV 60
           MESTPK++PI+IKCD +KPSSAWNWLERW+SV     T + NL TEE       +NL   
Sbjct: 311 MESTPKTKPINIKCDPTKPSSAWNWLERWMSVPKPEKTSKANLTTEE-------QNLEET 363

Query: 61  AETAV-PSEGFSELADSKSNKETVLPSETDENQITYDADDSKFQQHHPTSSLLGDNSVQP 119
               + P   F        N ++ + ++T+ +  +Y+A           S + G N    
Sbjct: 364 QNVKISPQADF-------VNSDSTVENKTETDMPSYEA-----------SKVEGQNVELS 405

Query: 120 QFNTISTSTSDAKESSIDIKSLPNQNMQSNENYQMEINSHFHKAEIEGEETD-QPKRSMK 178
           +   +S   S    + +   S+ +Q + +  +  +E          E E  D Q K S+K
Sbjct: 406 ETEKMSQYDSPEASAEVYYDSIQSQPLAAKPDSLLE----------EPEYVDGQIKHSLK 455

Query: 179 RNASEQLETEGKRFVFGSRKIGNPAFIAVQSKFEELSSTANSNKSFSLSYQDGAVESNMD 238
                             RK+ NP+FIA QSKFEEL+S+  SNK+ +LS +D  +     
Sbjct: 456 ------------------RKVSNPSFIAAQSKFEELTSSTGSNKAMTLSSKDDVLGEEGK 497

Query: 239 TISSGADTVVRTKELNLVGNSVPNNLRGQCGDSECGTELSVTSTLDSPD-IFEVGATEYE 297
           T     DT    K+ +L  +  P  L G    SECGTELSVTS+LD+ +   +    E  
Sbjct: 498 TDIDSPDTTNTIKDHSL-EDVTPAELSG----SECGTELSVTSSLDTLEKKSDAEGAEPR 552

Query: 298 HEAKSSEKETYNRNSTIDVVVEAKDVPT-DPVSNPFDYLMVQPEKLDTVKDESVDSVVAA 356
            EAK  E +T+  +    + ++ KD  +   V +P        EK++  KDE     V  
Sbjct: 553 VEAKLLEDDTFKTDQAELIEIDVKDATSMGTVEDP-------KEKVENAKDE-----VEI 600

Query: 357 DSLHVELKPERSASDVQRELYSETGGP-AYRSSPEASPRSHMTVPESQGTPSSQV--SVK 413
            + H E  P  S  D ++    +  GP AY  S  A   + MT+ ESQ TP+SQ   SVK
Sbjct: 601 SATHHE--PVISTPDSKKRRAEDESGPQAYALSEGA--LTPMTITESQATPASQASSSVK 656

Query: 414 PKRNRSDKSASSQKRKSLSAGKRSPSNPNHDSGARSSMEQLP-KDQKNGKRRNSFGSSRP 472
            ++ +S+KS SSQKRK     K+  S+P  + G   + EQ   K+QK+G RR SFG    
Sbjct: 657 ARKGKSEKSGSSQKRK---VSKKITSSPKQEIGTGEATEQEEGKEQKSG-RRTSFG---- 708

Query: 473 DNTDQEARDXX-XXXXLPHFMQATESARAKIQANNSPRSSPDVHDREYI--KKRQSLPG- 528
              DQEAR+       LP FMQ T+SA+AK+Q +NSPRSSPD+ +R+ +  KKR SLPG 
Sbjct: 709 --YDQEARESSGGKNSLPRFMQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGV 766

Query: 529 SNGRQSSPSIQRSLSQAQPGTK 550
           +NG+Q SP IQRS SQAQ GTK
Sbjct: 767 TNGKQVSPRIQRSASQAQQGTK 788