Jatropha Genome Database

JcCB0034881.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0034881.20 + phase: 0 /pseudo
         (158 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42080.1 | Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1 (AR...   234   1e-62
AT5G42080.2 | Symbols: ADL1, ADL1A, AG68, DRP1A | ADL1 (ARABIDOP...   234   1e-62
AT3G61760.1 | Symbols: ADL1B | ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1...   213   4e-56
AT3G60190.1 | Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E | ADL1E (...   196   6e-51
AT1G14830.1 | Symbols: ADL1C, ADL5, DRP1C | ADL1C (ARABIDOPSIS D...   191   2e-49
AT2G44590.3 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATE...   185   8e-48
AT2G44590.2 | Symbols:  | ADL1D (ARABIDOPSIS DYNAMIN-RELATED PRO...   185   8e-48
AT2G44590.1 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATE...   185   9e-48
AT2G14120.3 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |...    98   3e-21
AT2G14120.1 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |...    97   3e-21
AT2G14120.2 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |...    97   3e-21
AT4G33650.1 | Symbols: ADL2, DRP3A | DRP3A (DYNAMIN-RELATED PROT...    96   1e-20

>AT5G42080.1 | Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9 | ADL1
           (ARABIDOPSIS DYNAMIN-LIKE PROTEIN); GTP binding /
           GTPase/ protein binding | chr5:16820661-16824536 REVERSE
          Length = 610

 Score =  234 bits (598), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 112/134 (83%), Positives = 119/134 (88%)

Query: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFL 60
           MENLISLVNKIQRACTALGDHG++SALPTLWDSLPAIA            LES+VGKDFL
Sbjct: 1   MENLISLVNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFL 60

Query: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTKQ 120
           PRGSGIVTRRPLVLQL K D+G+REYAEFLHLPRK+FTDFAAVRKEIQDETDRETGR+K 
Sbjct: 61  PRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKA 120

Query: 121 ISSVPIHLSIYSPN 134
           ISSVPIHLSIYSPN
Sbjct: 121 ISSVPIHLSIYSPN 134


>AT5G42080.2 | Symbols: ADL1, ADL1A, AG68, DRP1A | ADL1 (ARABIDOPSIS
           DYNAMIN-LIKE PROTEIN); GTP binding / GTPase/ protein
           binding | chr5:16821564-16824536 REVERSE
          Length = 429

 Score =  234 bits (598), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 112/134 (83%), Positives = 119/134 (88%)

Query: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFL 60
           MENLISLVNKIQRACTALGDHG++SALPTLWDSLPAIA            LES+VGKDFL
Sbjct: 1   MENLISLVNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFL 60

Query: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTKQ 120
           PRGSGIVTRRPLVLQL K D+G+REYAEFLHLPRK+FTDFAAVRKEIQDETDRETGR+K 
Sbjct: 61  PRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFAAVRKEIQDETDRETGRSKA 120

Query: 121 ISSVPIHLSIYSPN 134
           ISSVPIHLSIYSPN
Sbjct: 121 ISSVPIHLSIYSPN 134


>AT3G61760.1 | Symbols: ADL1B | ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B);
           GTP binding / GTPase | chr3:22860546-22864092 REVERSE
          Length = 610

 Score =  213 bits (542), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 104/135 (77%), Positives = 117/135 (86%), Gaps = 2/135 (1%)

Query: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFL 60
           ME+LI+LVNKIQRACTALGDHGE S+LPTLWDSLPAIA            LESVVGKDFL
Sbjct: 1   MESLIALVNKIQRACTALGDHGEGSSLPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFL 60

Query: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGR-TK 119
           PRG+GIVTRRPLVLQLH+ DEG +EYAEF+HLP+K+FTDFAAVR+EI DETDRETGR +K
Sbjct: 61  PRGAGIVTRRPLVLQLHRIDEG-KEYAEFMHLPKKKFTDFAAVRQEISDETDRETGRSSK 119

Query: 120 QISSVPIHLSIYSPN 134
            IS+VPIHLSI+SPN
Sbjct: 120 VISTVPIHLSIFSPN 134


>AT3G60190.1 | Symbols: ADL4, ADLP2, EDR3, DRP1E, ADL1E | ADL1E
           (ARABIDOPSIS DYNAMIN-LIKE 1E); GTP binding / GTPase |
           chr3:22244367-22247651 REVERSE
          Length = 624

 Score =  196 bits (498), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 93/137 (67%), Positives = 111/137 (81%), Gaps = 3/137 (2%)

Query: 1   MENLISLVNKIQRACTALGDHGE---ASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGK 57
           ME+LI LVN+IQRACT LGD+G    ++A  +LW++LP +A            LES+VG+
Sbjct: 4   MESLIGLVNRIQRACTVLGDYGGGTGSNAFNSLWEALPTVAVVGGQSSGKSSVLESIVGR 63

Query: 58  DFLPRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGR 117
           DFLPRGSGIVTRRPLVLQLHK+D+G+ EYAEFLHLP+K+FTDFA VR+EIQDETDR TG+
Sbjct: 64  DFLPRGSGIVTRRPLVLQLHKTDDGTEEYAEFLHLPKKQFTDFALVRREIQDETDRITGK 123

Query: 118 TKQISSVPIHLSIYSPN 134
            KQIS VPIHLSIYSPN
Sbjct: 124 NKQISPVPIHLSIYSPN 140


>AT1G14830.1 | Symbols: ADL1C, ADL5, DRP1C | ADL1C (ARABIDOPSIS
           DYNAMIN-LIKE PROTEIN 1C); GTP binding / GTPase |
           chr1:5107699-5111470 REVERSE
          Length = 614

 Score =  191 bits (484), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/134 (67%), Positives = 108/134 (80%), Gaps = 2/134 (1%)

Query: 1   MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFL 60
           M++LI L+NKIQRACT LGDHG      +LW++LP +A            LESVVG+DFL
Sbjct: 4   MKSLIGLINKIQRACTVLGDHGGEGM--SLWEALPTVAVVGGQSSGKSSVLESVVGRDFL 61

Query: 61  PRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTKQ 120
           PRGSGIVTRRPLVLQLHK+++G+ EYAEFLH P+KRF DFAAVRKEI+DETDR TG++KQ
Sbjct: 62  PRGSGIVTRRPLVLQLHKTEDGTTEYAEFLHAPKKRFADFAAVRKEIEDETDRITGKSKQ 121

Query: 121 ISSVPIHLSIYSPN 134
           IS++PI LSIYSPN
Sbjct: 122 ISNIPIQLSIYSPN 135


>AT2G44590.3 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATED
           PROTEIN 1D); GTP binding / GTPase |
           chr2:18403856-18406961 REVERSE
          Length = 612

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 1   MENLISLVNKIQRACTALGDHG-EASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDF 59
           ME+LI L+N IQRACT +GDHG +++AL +LW++LP++A            LES+VG+DF
Sbjct: 1   MESLIVLINTIQRACTVVGDHGGDSNALSSLWEALPSVAVVGGQSSGKSSVLESIVGRDF 60

Query: 60  LPRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTK 119
           LPRGSGIVTRRPLVLQLHK++ G+ + AEFLHL  K+FT+F+ VRKEI+DETDR TG+ K
Sbjct: 61  LPRGSGIVTRRPLVLQLHKTENGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNK 120

Query: 120 QISSVPIHLSIYSPN 134
           QISS+PIHLSI+SPN
Sbjct: 121 QISSIPIHLSIFSPN 135


>AT2G44590.2 | Symbols:  | ADL1D (ARABIDOPSIS DYNAMIN-RELATED
           PROTEIN 1D); GTP binding / GTPase |
           chr2:18403856-18406961 REVERSE
          Length = 595

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 1   MENLISLVNKIQRACTALGDHG-EASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDF 59
           ME+LI L+N IQRACT +GDHG +++AL +LW++LP++A            LES+VG+DF
Sbjct: 1   MESLIVLINTIQRACTVVGDHGGDSNALSSLWEALPSVAVVGGQSSGKSSVLESIVGRDF 60

Query: 60  LPRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTK 119
           LPRGSGIVTRRPLVLQLHK++ G+ + AEFLHL  K+FT+F+ VRKEI+DETDR TG+ K
Sbjct: 61  LPRGSGIVTRRPLVLQLHKTENGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNK 120

Query: 120 QISSVPIHLSIYSPN 134
           QISS+PIHLSI+SPN
Sbjct: 121 QISSIPIHLSIFSPN 135


>AT2G44590.1 | Symbols: ADL1D | ADL1D (ARABIDOPSIS DYNAMIN-RELATED
           PROTEIN 1D); GTP binding / GTPase |
           chr2:18403856-18406961 REVERSE
          Length = 596

 Score =  185 bits (470), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 110/135 (81%), Gaps = 1/135 (0%)

Query: 1   MENLISLVNKIQRACTALGDHG-EASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDF 59
           ME+LI L+N IQRACT +GDHG +++AL +LW++LP++A            LES+VG+DF
Sbjct: 1   MESLIVLINTIQRACTVVGDHGGDSNALSSLWEALPSVAVVGGQSSGKSSVLESIVGRDF 60

Query: 60  LPRGSGIVTRRPLVLQLHKSDEGSREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRTK 119
           LPRGSGIVTRRPLVLQLHK++ G+ + AEFLHL  K+FT+F+ VRKEI+DETDR TG+ K
Sbjct: 61  LPRGSGIVTRRPLVLQLHKTENGTEDNAEFLHLTNKKFTNFSLVRKEIEDETDRITGKNK 120

Query: 120 QISSVPIHLSIYSPN 134
           QISS+PIHLSI+SPN
Sbjct: 121 QISSIPIHLSIFSPN 135


>AT2G14120.3 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |
           chr2:5954253-5960015 REVERSE
          Length = 809

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 14/138 (10%)

Query: 3   NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFLPR 62
           ++I +VNK+Q     LG     +        LP +A            LE++VG+DFLPR
Sbjct: 20  SVIPIVNKLQDIFAQLGSQSTIA--------LPQVAVVGSQSSGKSSVLEALVGRDFLPR 71

Query: 63  GSGIVTRRPLVLQLHK----SDEGS-REYAEFLHL-PRKRFTDFAAVRKEIQDETDRETG 116
           G+ I TRRPL LQL +    SD GS  E+ EFLH  P +R  DF+ +R+EI+ ET+R +G
Sbjct: 72  GNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSEIRREIEAETNRVSG 131

Query: 117 RTKQISSVPIHLSIYSPN 134
             K +S +PI L I+SPN
Sbjct: 132 ENKGVSDIPIGLKIFSPN 149


>AT2G14120.1 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |
           chr2:5954253-5960015 REVERSE
          Length = 780

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 14/138 (10%)

Query: 3   NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFLPR 62
           ++I +VNK+Q     LG     +        LP +A            LE++VG+DFLPR
Sbjct: 20  SVIPIVNKLQDIFAQLGSQSTIA--------LPQVAVVGSQSSGKSSVLEALVGRDFLPR 71

Query: 63  GSGIVTRRPLVLQLHK----SDEGS-REYAEFLH-LPRKRFTDFAAVRKEIQDETDRETG 116
           G+ I TRRPL LQL +    SD GS  E+ EFLH  P +R  DF+ +R+EI+ ET+R +G
Sbjct: 72  GNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSEIRREIEAETNRVSG 131

Query: 117 RTKQISSVPIHLSIYSPN 134
             K +S +PI L I+SPN
Sbjct: 132 ENKGVSDIPIGLKIFSPN 149


>AT2G14120.2 | Symbols: DRP3B | dynamin-like protein 2b (ADL2b) |
           chr2:5954253-5960015 REVERSE
          Length = 780

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 14/138 (10%)

Query: 3   NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFLPR 62
           ++I +VNK+Q     LG     +        LP +A            LE++VG+DFLPR
Sbjct: 20  SVIPIVNKLQDIFAQLGSQSTIA--------LPQVAVVGSQSSGKSSVLEALVGRDFLPR 71

Query: 63  GSGIVTRRPLVLQLHK----SDEGS-REYAEFLH-LPRKRFTDFAAVRKEIQDETDRETG 116
           G+ I TRRPL LQL +    SD GS  E+ EFLH  P +R  DF+ +R+EI+ ET+R +G
Sbjct: 72  GNDICTRRPLRLQLVQTKPSSDGGSDEEWGEFLHHDPVRRIYDFSEIRREIEAETNRVSG 131

Query: 117 RTKQISSVPIHLSIYSPN 134
             K +S +PI L I+SPN
Sbjct: 132 ENKGVSDIPIGLKIFSPN 149


>AT4G33650.1 | Symbols: ADL2, DRP3A | DRP3A (DYNAMIN-RELATED PROTEIN
           3A); GTP binding / GTPase/ phosphoinositide binding |
           chr4:16161073-16166587 FORWARD
          Length = 808

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 13/137 (9%)

Query: 3   NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESVVGKDFLPR 62
           ++I +VNK+Q     LG     +        LP +             LE++VG+DFLPR
Sbjct: 36  SVIPIVNKLQDIFAQLGSQSTIA--------LPQVVVVGSQSSGKSSVLEALVGRDFLPR 87

Query: 63  GSGIVTRRPLVLQL----HKSDEGSR-EYAEFLHLPRKRFTDFAAVRKEIQDETDRETGR 117
           G+ I TRRPLVLQL     +++ GS  E+ EF HLP  RF DF+ +R+EI+ ET+R  G 
Sbjct: 88  GNDICTRRPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAETNRLVGE 147

Query: 118 TKQISSVPIHLSIYSPN 134
            K ++   I L I SPN
Sbjct: 148 NKGVADTQIRLKISSPN 164