Jatropha Genome Database
- JcCB0034461.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0034461.20 - phase: 0
(500 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G56030.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 325 3e-89
AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 1e-83
AT5G27395.2 | Symbols: | P-P-bond-hydrolysis-driven protein tra... 232 4e-61
AT5G27395.1 | Symbols: | P-P-bond-hydrolysis-driven protein tra... 231 6e-61
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 92 9e-19
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 89 8e-18
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 88 1e-17
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 87 2e-17
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 81 2e-15
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 80 4e-15
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 6e-15
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 79 6e-15
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 79 6e-15
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 77 2e-14
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 4e-14
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 76 5e-14
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 75 7e-14
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 8e-14
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 75 1e-13
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 2e-13
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 3e-13
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 73 4e-13
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 73 4e-13
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796)... 69 8e-12
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 67 3e-11
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 8e-11
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 64 2e-10
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 64 2e-10
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 64 3e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 3e-10
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 8e-10
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 62 1e-09
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) ... 60 2e-09
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 60 3e-09
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 60 3e-09
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 3e-09
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 9e-09
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 58 1e-08
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 6e-08
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 55 8e-08
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 53 5e-07
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 6e-07
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 52 7e-07
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 52 8e-07
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 51 2e-06
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 49 5e-06
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 49 6e-06
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 49 8e-06
>AT3G56030.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT2G40240.1); Has 6707 Blast hits to 2251
proteins in 74 species: Archae - 0; Bacteria - 0;
Metazoa - 57; Fungi - 13; Plants - 6562; Viruses - 0;
Other Eukaryotes - 75 (source: NCBI BLink). |
chr3:20791259-20792314 FORWARD
Length = 351
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 238/335 (71%), Gaps = 4/335 (1%)
Query: 166 ESLPFLRKLHHISPNCRPIL-SITTRFFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDF 224
+++ LR+ + N R +L SI+ R F+T +PN + P +RT +D+L+ AG DF
Sbjct: 14 QTMSLLRRFVKEANNSRFLLQSISGRSFSTVNPNPTASPGRRTCVEFDNLIFKAGSSGDF 73
Query: 225 NMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIA 284
+ LLN R + C+N+T TFKF+ NT++ S L+D+ + L + D G+ R +Y TLIA
Sbjct: 74 EAVRRLLNSRVVNACFNTTATFKFLTNTDSYSSSLEDLRRILPQTDAGYTRKHSYETLIA 133
Query: 285 RLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSP 344
RLCKL RI ++L +++ MA G++GL+ C F+PILN+LT + ++EEAW V+++M++ +
Sbjct: 134 RLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELMRSHAIPV 193
Query: 345 DITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGA---DSRTYDALVLGACRAGKVEGAL 401
D+TS+NY LT++CY+G++ AS++++++EEEE G D+RTYDALVLGAC++G+VE A+
Sbjct: 194 DVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACKSGRVEAAM 253
Query: 402 MVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKL 461
+LRR+E++ + L++TH H+I ++ GYYA +V+FVM YAG+D LD E+ G LASKL
Sbjct: 254 AILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFVMAYAGKDKRLDEENLGSLASKL 313
Query: 462 VKLGRFEEAKVVLKEMQGRRLVMSDKLRKYCNSDV 496
+K RF+EAK+VLKEM R L M D LR++ +V
Sbjct: 314 IKRKRFKEAKMVLKEMSVRGLRMGDALREFHEKNV 348
>AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16811051-16812106 FORWARD
Length = 351
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 225/328 (68%), Gaps = 7/328 (2%)
Query: 172 RKLHHISPNCRPILSI-TTRFFAT-QSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHY 229
R+ S NC L I R F+T + P P +R +D L+N AG DF +
Sbjct: 6 RRFVKQSVNCITFLQILAERSFSTVKIP-----PGRRKTTEFDKLINEAGSSGDFETVRR 60
Query: 230 LLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKL 289
LLN R +N+++TFKF+ NT + S L+D+ + L ++D GF+R +AY+ LI+RLCKL
Sbjct: 61 LLNNRIVLGSFNTSDTFKFLTNTASYSSYLEDLRRVLPQIDGGFSRKNAYDILISRLCKL 120
Query: 290 DRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSF 349
RI ++L ++ M+ G+ GL +++PIL SLT + K+EEAW V++ M++ VS D+T++
Sbjct: 121 GRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAY 180
Query: 350 NYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIED 409
NY LT++CY+G L +AS++M++IEE+ DSR+YDALVLGACRAGKVE A+ +LRR+E+
Sbjct: 181 NYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEE 240
Query: 410 DKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEE 469
D V L+STH H+I+ ++ GYYA ++FVM YAG+D LD+ESFG LA KLVK R+EE
Sbjct: 241 DGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEE 300
Query: 470 AKVVLKEMQGRRLVMSDKLRKYCNSDVK 497
A +V+KEM R L M D+LR++ +V+
Sbjct: 301 AMIVVKEMVMRGLRMGDELRQFYEGNVR 328
>AT5G27395.2 | Symbols: | P-P-bond-hydrolysis-driven protein
transmembrane transporter | chr5:9671845-9674085 REVERSE
Length = 296
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 107/146 (73%), Positives = 128/146 (87%)
Query: 10 FTKSGWRRTKDDIILELKSAYAITKLRKSGYSKHQFYKEAIELYKEISAQIANGDKNSLR 69
FT+SGWRRTK+D I EL+SAYAI KLRK+GYSK+ FY EA+ELYK+I+ Q+ANG+K ++R
Sbjct: 124 FTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIR 183
Query: 70 KAVTEKMYSELKNEIKQRESRWSKVYWEMIEPVIKIRTLRARLIGVDRNDLNKVFIQLTL 129
K VTE+MYS LKNEIKQRE+ W VYWEM+EPV+KIRTL+ARLIG+DR DL K FIQLTL
Sbjct: 184 KNVTERMYSALKNEIKQREAMWDGVYWEMVEPVVKIRTLQARLIGIDRTDLKKAFIQLTL 243
Query: 130 EFLTKQKFEAYDSKGTIVAGDKTKEL 155
EFLTKQKFEAYD+KG + AGDK KE+
Sbjct: 244 EFLTKQKFEAYDAKGNVAAGDKNKEV 269
>AT5G27395.1 | Symbols: | P-P-bond-hydrolysis-driven protein
transmembrane transporter | chr5:9671845-9674085 REVERSE
Length = 313
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 107/146 (73%), Positives = 128/146 (87%)
Query: 10 FTKSGWRRTKDDIILELKSAYAITKLRKSGYSKHQFYKEAIELYKEISAQIANGDKNSLR 69
FT+SGWRRTK+D I EL+SAYAI KLRK+GYSK+ FY EA+ELYK+I+ Q+ANG+K ++R
Sbjct: 141 FTRSGWRRTKEDFIRELRSAYAIAKLRKTGYSKNTFYIEALELYKQINIQMANGEKKTIR 200
Query: 70 KAVTEKMYSELKNEIKQRESRWSKVYWEMIEPVIKIRTLRARLIGVDRNDLNKVFIQLTL 129
K VTE+MYS LKNEIKQRE+ W VYWEM+EPV+KIRTL+ARLIG+DR DL K FIQLTL
Sbjct: 201 KNVTERMYSALKNEIKQREAMWDGVYWEMVEPVVKIRTLQARLIGIDRTDLKKAFIQLTL 260
Query: 130 EFLTKQKFEAYDSKGTIVAGDKTKEL 155
EFLTKQKFEAYD+KG + AGDK KE+
Sbjct: 261 EFLTKQKFEAYDAKGNVAAGDKNKEV 286
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%)
Query: 270 DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE 329
D F + YN ++ +LCK R K++ + D M NI ++N ++ L K+ E
Sbjct: 262 DGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE 321
Query: 330 AWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVL 389
A V+D MK+ G++P++ ++N L+ +C G L A + + ++ L TY+ LV
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 390 GACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL 449
G CR G GA +++ +E+ + T+ +I F + +A++ +
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 450 DTESFGLLASKLVKLGRFEEAKVVLKEM 477
D ++ +L G+ EA + K M
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%)
Query: 274 ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHV 333
A Y LI L K K+ + + M N+ ++N ++N L + ++A+ V
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 334 IDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACR 393
D M+ GVS +I ++N L+ C L A+K++ +++ + + + TY+ L+ G C
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 394 AGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
GK+ AL + R ++ + T+ ++S F + G + A K V
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 93/208 (44%), Gaps = 37/208 (17%)
Query: 278 AYNTLIARLCKLDRIKESLHIV-DIMACG------QYGLNICSF---------------- 314
YNTLI C + ++ ++L + D+ + G Y + + F
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 315 -----NP-------ILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL 362
P ++++ ME+A + M+ +G+ PD+ +++ L+ +C G +
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
AS++ K + E+ + Y+ ++LG C+ G AL +L+ +E+ ++ +++ ++
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 423 ISAFLKLGYYAQAVKFV--MIYAGRDAA 448
I K +A + V MI +G D +
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPS 547
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 43/315 (13%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K ++ Y LV A R++ F+ L L++K ++ T F I N ++ LD +
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 265 TLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDIMACGQY-GLNICSFNPILNSL 321
++ + +A +NTLI K+ +++ES ++D+M + N + N ++ +
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 322 TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM-MKRIEEEELGAD 380
+++K+EEAW+++ M++ GV PD+ +FN L AY G+ A M + R+ ++ +
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPN 530
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL----------- 429
RT +V G C GK+E AL R+++ VH +I FL +
Sbjct: 531 VRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD 590
Query: 430 -----GYYAQAVKFV---------------------MIYAGRDAALDTESFGLLASKLVK 463
G V F M+ G D D +F +LA +
Sbjct: 591 LMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP--DIHAFSILAKGYAR 648
Query: 464 LGRFEEAKVVLKEMQ 478
G E+A+ +L +M+
Sbjct: 649 AGEPEKAEQILNQMR 663
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
T++ C+ +++E+L M N+ FN ++ + M+ V+D+M+
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
GV PD+ +F+ L+ A+ G++ ++ + E + D + L G RAG+ E
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAG-RDAALDTESFGLLA 458
A +L ++ V + IIS + G +A++ G + + ++ L
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMSDK 487
+ + +A+ +LK+M+G+ +V + K
Sbjct: 715 WGFGEAKQPWKAEELLKDMEGKNVVPTRK 743
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 202 FPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDD 261
PD V ++ L+ R+ + L + C T+ + ++ S LD+
Sbjct: 397 LPD---VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 262 VTQTLARLD-NGFAR-MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILN 319
L +++ +G AR + YNTLI CK ++ +E+ I D M N ++N +++
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 320 SLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGA 379
L +++E+A ++D M G PD ++N LLT +C G++ A+ +++ +
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 380 DSRTYDALVLGACRAGKVEGALMVLRRIE 408
D TY L+ G C+AG+VE A +LR I+
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 123/267 (46%), Gaps = 16/267 (5%)
Query: 219 GRERDFNMLHYLLNKRARDNCYNSTNTFKFIAN-------TNNSLSILDDVTQTLARLDN 271
GR D L+++ +D + TF + N +++ I+D L
Sbjct: 273 GRVED--ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD------VMLQE 324
Query: 272 GF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEA 330
G+ + YN++I+ LCKL +KE++ ++D M N ++N ++++L ++EEA
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
+ ++ + G+ PD+ +FN L+ C N A ++ + + + D TY+ L+
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
C GK++ AL +L+++E T+ +I F K +A + + +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEM 477
+ ++ L L K R E+A ++ +M
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 139/308 (45%), Gaps = 17/308 (5%)
Query: 182 RPILSITTRFF--ATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNC 239
+P S R F A++ PN + P A Y++++ GR F+ + +L C
Sbjct: 60 QPDDSAALRLFNLASKKPNFSPEP-----ALYEEILLRLGRSGSFDDMKKILEDMKSSRC 114
Query: 240 YNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIV 299
T+TF + + + D++ + + + F + R+ L SL +V
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFG-LKPDTHFYNRMLNLLVDGNSLKLV 173
Query: 300 DI----MACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTA 355
+I M+ ++ +FN ++ +L ++ A +++ M + G+ PD +F ++
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 356 YCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIED-DKVHA 414
Y G+L A ++ +++ E + + + +V G C+ G+VE AL ++ + + D
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 415 LHSTHLHIISAFLKLGYYAQAVKF--VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKV 472
T +++ K G+ A++ VM+ G D D ++ + S L KLG +EA
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP--DVYTYNSVISGLCKLGEVKEAVE 351
Query: 473 VLKEMQGR 480
VL +M R
Sbjct: 352 VLDQMITR 359
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 97/215 (45%)
Query: 264 QTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTS 323
Q ++ D F +NTL+ LCK +K ++ I+D+M Y ++ ++N +++ L
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 324 RKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRT 383
+++EA V+D M T SP+ ++N L++ C + A+++ + + + + D T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 384 YDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYA 443
+++L+ G C A+ + + T+ +I + G +A+ +
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 444 GRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
A ++ L K + EA+ + EM+
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN LI LC ++ E+L+++ M ++ ++N +++ K EA + D M+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GVS + ++N L+ C + + A+++M ++ E D TY++L+ CR G ++
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +++ + + T+ +IS K G A K + + L ++ +
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 459 SKLVKLGRFEEAKVVLKEM 477
L + + EA + +EM
Sbjct: 618 QGLFRKRKTTEAINLFREM 636
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 5/282 (1%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD V Y+ +VN R D ++ LL K N T+ I ++ +D
Sbjct: 181 PD---VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 263 TQTLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
++ + S YN+L+ LCK + + ++ M + N+ +FN +L+
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
K++EA + M T G+SP+I ++N L+ YC L A+ M+ + + D
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM 440
T+ +L+ G C +V+ + V R I + A T+ ++ F + G A +
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417
Query: 441 IYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
D ++G+L L G+ E+A + +++Q ++
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 107/238 (44%), Gaps = 24/238 (10%)
Query: 266 LARLDNGFARMSAYNTLIARLCK---LDRIKESLHIVDIM---------ACGQYGL---- 309
+R + AR +N L+ CK L+ I +++ ++IM C Y +
Sbjct: 81 FSRFFSAIARTKQFN-LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 139
Query: 310 -------NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL 362
+ +FN ++ L K+ EA ++D M G PD+ ++N ++ C +G+
Sbjct: 140 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT 199
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
A +++++EE + AD TY ++ CR G ++ A+ + + +E + + T+ +
Sbjct: 200 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 259
Query: 423 ISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+ K G + + R+ + +F +L VK G+ +EA + KEM R
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
NI + N ++N K A+ V+ + +G PD T+FN L+ G + A ++
Sbjct: 112 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 171
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
R+ E D TY+++V G CR+G AL +LR++E+ V A T+ II + +
Sbjct: 172 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 231
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
G A+ + ++ L L K G++ + ++LK+M R +V
Sbjct: 232 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 93/201 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YNTL+ C +R+ E+ +++D+M + +I +F ++ K++++ V +
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G+ + +++ L+ +C +G + A ++ + + + D TY L+ G C GK+
Sbjct: 385 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 444
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
E AL + ++ K+ + II K G A + + ++ ++
Sbjct: 445 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 504
Query: 458 ASKLVKLGRFEEAKVVLKEMQ 478
S L K G EA ++L++M+
Sbjct: 505 ISGLCKKGSLSEANILLRKME 525
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 99/220 (45%), Gaps = 10/220 (4%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
+ +NTLI L ++ E++ +VD M ++ ++N I+N + A ++
Sbjct: 149 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 208
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M+ V D+ +++ ++ + C +G + AA + K +E + + + TY++LV G C+AGK
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
++L+ + ++ T ++ F+K G +A + R + + ++
Sbjct: 269 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 328
Query: 457 LASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLRKYCNSDV 496
L R EA +L M +R C+ D+
Sbjct: 329 LMDGYCMQNRLSEANNMLDLM----------VRNKCSPDI 358
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 74/150 (49%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
Y L+ LC +++++L I + + + L I + I+ + K+E+AW++ +
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
GV P++ ++ +++ C G+L A+ +++++EE+ + TY+ L+ R G +
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFL 427
+ ++ ++ A S+ +I L
Sbjct: 550 TASAKLIEEMKSCGFSADASSIKMVIDMLL 579
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/234 (17%), Positives = 98/234 (41%), Gaps = 2/234 (0%)
Query: 208 VAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLA 267
+ Y+ L++ + + + +L+ R+ C TF + + +DD +
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 382
Query: 268 RLDNG--FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRK 325
+ A Y+ L+ C+ +IK + + M ++ ++ +L+ L
Sbjct: 383 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 442
Query: 326 KMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYD 385
K+E+A + + ++ + I + ++ C G + A + + + + + TY
Sbjct: 443 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 502
Query: 386 ALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
++ G C+ G + A ++LR++E+D T+ +I A L+ G + K +
Sbjct: 503 VMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 556
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 247 KFIANTNNSLSILDDVTQTLARLDNGFARMS------------AYNTLIARLCKLDRIKE 294
K IA++ +LSI+ + +L F+ M +NTL+ LC R+ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 295 SLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLT 354
+L +VD M + + + N ++N L K+ +A +ID M G P+ ++ +L
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 355 AYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHA 414
C +G A ++++++EE + D+ Y ++ G C+ G ++ A + +E A
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 415 LHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVL 474
T+ +I F G + K + R + + +F +L VK G+ EA +L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 475 KEMQGR 480
KEM R
Sbjct: 357 KEMMQR 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 272 GF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEA 330
GF A + YNTLI C R + ++ M + N+ +F+ +++S K+ EA
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
++ M G++P+ ++N L+ +C L A +M+ + + D T++ L+ G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
C+A +++ L + R + V A T+ ++ F + G A K R D
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
S+ +L L G E+A + +++ ++
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+N LI CK +RI + L + M+ N ++N ++ K+E A + M
Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ V PDI S+ LL C NG L A ++ +IE+ ++ D Y ++ G C A KV+
Sbjct: 466 SRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 399 GA 400
A
Sbjct: 526 DA 527
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 97/204 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ +I LCK + + ++ + M + +I ++N ++ + + ++ ++ M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+SP++ +F+ L+ ++ G L A +++K + + + ++ TY++L+ G C+ ++E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A+ ++ + T +I+ + K ++ + R +T ++ L
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
+ G+ E AK + +EM RR+
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRV 469
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 3/262 (1%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARL- 269
Y L+ + +D + + N+ C + + + + +D+ ++
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 270 -DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
D F + Y LI LC +R E+L++V M NI ++ +++SL S+ K E
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
+A ++ M G+ P++ ++N L+ YC G + A +++ +E +L ++RTY+ L+
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA 448
G C++ V A+ VL ++ + KV T+ +I + G + A + + + R
Sbjct: 436 KGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 449 LDTESFGLLASKLVKLGRFEEA 470
D ++ + L K R EEA
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEA 516
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 97/200 (48%), Gaps = 1/200 (0%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN LI CK I++++ +V++M + N ++N ++ + + +A V++ M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKM 453
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
V PD+ ++N L+ C +GN +A +++ + + L D TY +++ C++ +V
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
E A + +E V+ + +I + K G +A + ++ ++ +F L
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 458 ASKLVKLGRFEEAKVVLKEM 477
L G+ +EA ++ ++M
Sbjct: 574 IHGLCADGKLKEATLLEEKM 593
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 93/201 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN+LI C+ + ++ +M + ++ +++SL K++EEA + D +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ GV+P++ + L+ YC G + A M++++ + +S T++AL+ G C GK+
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A ++ ++ + ST +I LK G + A D ++
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 458 ASKLVKLGRFEEAKVVLKEMQ 478
+ GR +A+ ++ +M+
Sbjct: 644 IQTYCREGRLLDAEDMMAKMR 664
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 4/159 (2%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLN--ICSFNPILNSLTSRKKMEEAWHVID 335
+N LI LC ++KE+ + + M + GL + + +++ L + A+
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMV--KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M + G PD ++ + YC G L+ A MM ++ E + D TY +L+ G G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQ 434
+ A VL+R+ D T L +I L++ Y Q
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 93/208 (44%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ YNTL+ L + + E + M + NI ++N ++N +EEA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
+ G+ PD ++ L+ YC +L +A K+ + + + Y L+ G C A
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+++ A+ + +++DD+ T+ +I + ++A+ V + ++
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 456 LLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+L L +FE+A+ +L +M + L+
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLM 390
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%)
Query: 306 QYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAA 365
+Y L I +N +LNSL ++E V M V P+I ++N ++ YC GN+ A
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 366 SKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISA 425
++ + +I E L D TY +L++G C+ ++ A V + + H+I
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 426 FLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+A+ + + ++ +L L R EA ++KEM+
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 119/284 (41%), Gaps = 9/284 (3%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K + Y+ L+N+ R + + + + D + T+ + N L +++ Q
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 265 TLAR-----LDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILN 319
+++ LD F Y +LI C+ + + + + M N ++ +++
Sbjct: 240 YVSKIVEAGLDPDFF---TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 320 SLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGA 379
L ++++EA + MK P + ++ L+ + C + A ++K +EE +
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 380 DSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
+ TY L+ C K E A +L ++ + + T+ +I+ + K G AV V
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 440 MIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ R + +T ++ L K +A VL +M R+++
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVL 459
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 2/183 (1%)
Query: 259 LDDVTQTLARLD-NGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNP 316
+DD+ L+ NGF + ++NTL+ + + E I D+M NI S+N
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 317 ILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEE 376
+ LT KK +A ++ID+MKT G+SPD+ ++N L+TAY + NL K ++E+
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
L D+ TY L+ C+ G ++ A+ V K+ + + + ++ + G +A
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 388
Query: 437 KFV 439
+ V
Sbjct: 389 QLV 391
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
AYN LI CK++RI ++ ++D M + + ++N ++ SL SR K++ A V++ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ P + ++ L+ A G + A K+M + L D TY+ ++ G C+ G V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A ++R +E ++ ++ A L G + + K + + ++ +L
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL 482
+ L + G+ EEA +LK M+ + L
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGL 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 121/270 (44%), Gaps = 5/270 (1%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD V Y+ L+N + + +L++ + T T+ + + S LD
Sbjct: 156 PD---VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 263 TQTLARL--DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+ L +L DN + Y LI + E+L ++D M ++ ++N I+
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
+ ++ A+ ++ ++ G PD+ S+N LL A G K+M ++ E+ +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM 440
TY L+ CR GK+E A+ +L+ +++ + ++ +I+AF + G A++F+
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 441 IYAGRDAALDTESFGLLASKLVKLGRFEEA 470
D ++ + + L K G+ ++A
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 137/318 (43%), Gaps = 50/318 (15%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFI-------ANTNNS 255
PD T Y+ ++ + ++ +LN+ DNC + T+ + + +
Sbjct: 191 PDTVT---YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 256 LSILDDVTQTLARLDNGFARMSAYNTLIARLCK---LDRIKESLHIVDIMAC-------- 304
L ++D++ + D M YNT+I +CK +DR E + +++ C
Sbjct: 248 LKLMDEMLSRGLKPD-----MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 305 ---------GQY---------------GLNICSFNPILNSLTSRKKMEEAWHVIDMMKTV 340
G++ N+ +++ ++ +L K+EEA +++ +MK
Sbjct: 303 ILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 341 GVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGA 400
G++PD S++ L+ A+C G L A + ++ + + D Y+ ++ C+ GK + A
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 401 LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASK 460
L + ++ + S++ + SA G +A+ ++ D ++ + S
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 461 LVKLGRFEEAKVVLKEMQ 478
L + G +EA +L +M+
Sbjct: 483 LCREGMVDEAFELLVDMR 500
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 285 RLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSP 344
R C+ ESLH+++ M Y ++ ++ + + + +A V+++++ G P
Sbjct: 98 RSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QP 156
Query: 345 DITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
D+ ++N L+ +C + A++++ R+ ++ D+ TY+ ++ C GK++ AL VL
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 405 RRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKL 464
++ D T+ +I A + G +A+K + R D ++ + + K
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 465 GRFEEAKVVLKEMQ 478
G + A +++ ++
Sbjct: 277 GMVDRAFEMVRNLE 290
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 88/193 (45%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+Y+ LIA C+ R+ ++ ++ M +I ++N +L +L K ++A + +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
VG SP+ +S+N + +A +G+ + A M+ + + D TY++++ CR G V
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A +L + + H T+ ++ F K A+ + G + ++ +L
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 458 ASKLVKLGRFEEA 470
+ G EA
Sbjct: 550 IEGIGFAGYRAEA 562
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 7/274 (2%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y L+ A ++ + + ++++ + + F + N + ++D Q L ++
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 271 N-GF-ARMSAYNTLIARLCKLDRIKESLHIVDIM---ACGQYGLNICSFNPILNSLTSRK 325
G S YNTLI + + S ++D+M G NI +FN ++ + +K
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 326 KMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASK--MMKRIEEEELGADSRT 383
K+EEAW V+ M+ GV PD ++N + T Y G + A + K + +E+ + RT
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 384 YDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYA 443
+V G CR G+V L +RR+++ +V A +I+ F+++ + + +
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMK 322
Query: 444 GRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ D ++ + + G E+A V KEM
Sbjct: 323 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
++TLI LC R+ E+L +VD M + ++ + N ++N L K EA +ID M
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G P+ ++ +L C +G A ++++++EE + D+ Y ++ G C+ G ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A + +E + T+ +I F G + K + R + +F +L
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 459 SKLVKLGRFEEAKVVLKEMQGR 480
VK G+ EA+ + KEM R
Sbjct: 341 DSFVKEGKLREAEELHKEMIHR 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 12/238 (5%)
Query: 257 SILDDVTQTLARLDNGF------------ARMSAYNTLIARLCKLDRIKESLHIVDIMAC 304
SI+ D LDN F + YN LI C R + ++ M
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 305 GQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMA 364
+ N+ +F+ +++S K+ EA + M G++PD ++ L+ +C +L
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 365 ASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIIS 424
A++M+ + + + RT++ L+ G C+A +++ L + R++ V A T+ +I
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 425 AFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
F +LG A + R + ++ +L L G E+A + ++++ ++
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 130/291 (44%), Gaps = 26/291 (8%)
Query: 188 TTRFFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFK 247
T R PN SF +R + + D N + RER + L++ +A D + + F+
Sbjct: 26 TLRIALINCPNELSFCCERGFSAFSDR-NLSYRER---LRSGLVDIKADD----AIDLFR 77
Query: 248 FIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQY 307
+ ++ +++D +RL + A+ Y+ ++A LCK +K H
Sbjct: 78 DMIHSRPLPTVID-----FSRLFSAIAKTKQYDLVLA-LCKQMELKGIAH---------- 121
Query: 308 GLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASK 367
N+ + + ++N +K+ A+ + + +G P+ +F+ L+ C G + A +
Sbjct: 122 --NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 368 MMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFL 427
++ R+ E D T + LV G C +GK A++++ ++ + T+ +++
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMC 239
Query: 428 KLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
K G A A++ + R+ LD + ++ L K G + A + EM+
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 104/239 (43%), Gaps = 5/239 (2%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y L++ +E + + +++ C + TF + N + +DD
Sbjct: 366 PDTIT---YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 263 TQTLAR--LDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+ + L A YNTLI C+L ++ + + M + NI ++ +L+
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
L + E+A + + ++ + DI +N ++ C + A + + + +
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
+TY+ ++ G C+ G + A ++ R++E+D T+ +I A L G ++VK +
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 91/204 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ +I LCK + + ++ + M NI ++N ++ + + ++ ++ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
++P++ +F+ L+ ++ G L A ++ K + + D+ TY +L+ G C+ ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A ++ + T +I+ + K ++ + R DT ++ L
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
+LG+ AK + +EM R++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKV 469
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 134/284 (47%), Gaps = 17/284 (5%)
Query: 203 PDKRTVAYYDDLVNAAGRER----DFNMLHYLLNKRARDNCYNST---NTFKFIANTNNS 255
PD V Y+ L+ +E +LH + NK + N Y+ T + F + + +
Sbjct: 387 PD---VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 256 LSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFN 315
++L++++ D +N LI+ CK RI E++ I M ++ +FN
Sbjct: 444 YNVLNEMSA-----DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEE 375
+++ L +++ A ++ M + GV + ++N L+ A+ G + A K++ + +
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 376 ELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI-ISAFLKLGYYAQ 434
D TY++L+ G CRAG+V+ A + ++ D HA + +I I+ + G +
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG-HAPSNISCNILINGLCRSGMVEE 617
Query: 435 AVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
AV+F R + D +F L + L + GR E+ + +++Q
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 259 LDDVTQTLARLDNGFA---RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFN 315
LDD L+ + + + YN+LI K + +L ++ M N+ S+
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEE 375
+++ K++EA++V++ M G+ P+ FN L++A+C + A ++ + + +
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 376 ELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
D T+++L+ G C +++ AL +LR + + V A T+ +I+AFL+ G +A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 436 VKFV--MIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
K V M++ G + LD ++ L L + G ++A+ + ++M
Sbjct: 549 RKLVNEMVFQG--SPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 8/236 (3%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K ++ L++A +E + + R C TF + + L +D++
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS---GLCEVDEIKH 512
Query: 265 TLARL-----DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILN 319
L L + A YNTLI + IKE+ +V+ M L+ ++N ++
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 320 SLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGA 379
L ++++A + + M G +P S N L+ C +G + A + K +
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 380 DSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
D T+++L+ G CRAG++E L + R+++ + + T ++S K G+ A
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN+LI LC+ + ++ + + M + + S N ++N L +EEA M
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G +PDI +FN L+ C G + M ++++ E + D+ T++ L+ C+ G V
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 399 GALMVLRRIEDDKVHALHST 418
A ++L +D H T
Sbjct: 687 DACLLLDEGIEDGFVPNHRT 706
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 96/237 (40%), Gaps = 34/237 (14%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ ++ C ++ I +L ++ M N + +++SL+ ++ EA +++ M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PD +FN ++ C + A+KM+ R+ D TY L+ G C+ G+V+
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 399 GALMVLRRIEDDKVHALHSTHLH---------------------------------IISA 425
A + RI ++ + +T +H +I
Sbjct: 340 AAKDLFYRIPKPEI-VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 426 FLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ K G A++ + + + S+ +L KLG+ +EA VL EM L
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 12/247 (4%)
Query: 246 FKFIANTNNSLSILDDVTQTLARLDNGFARMS------------AYNTLIARLCKLDRIK 293
K IA+ +LSI+ + +L F+ M ++TLI LC R+
Sbjct: 100 LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS 159
Query: 294 ESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLL 353
E+L +VD M + + + N ++N L K+ +A +ID M G P+ ++ +L
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 354 TAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVH 413
C +G A ++++++EE ++ D+ Y ++ G C+ G ++ A + +E
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 414 ALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVV 473
A + +I F G + K + R D +F L VK G+ EA+ +
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 474 LKEMQGR 480
KEM R
Sbjct: 340 HKEMIQR 346
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 107/239 (44%), Gaps = 5/239 (2%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y L++ +E + +++L+ C + TF + N +++DD
Sbjct: 350 PDTVT---YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 263 TQTLAR--LDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+ + L A YNTLI C+L +++ + + M + +I S+ +L+
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
L + E+A + + ++ + DI +N ++ C + A + + + + D
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
+TY+ ++ G C+ G + A ++ R++E+D T+ +I A L G ++ K +
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 272 GF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEA 330
GF A + Y TLI C R + ++ M + ++ +F+ +++ K+ EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
+ M G+SPD ++ L+ +C L A+ M+ + + G + RT++ L+ G
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
C+A ++ L + R++ V A T+ +I F +LG A + R D
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
S+ +L L G E+A + ++++ ++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 266 LARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRK 325
+RL + AR Y+ L+ LCK +K H N+ + + ++N +
Sbjct: 75 FSRLFSVVARTKQYD-LVLDLCKQMELKGIAH------------NLYTLSIMINCCCRCR 121
Query: 326 KMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYD 385
K+ A+ + + +G PD +F+ L+ C G + A +++ R+ E T +
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 386 ALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGR 445
ALV G C GKV A++++ R+ + T+ ++ K G A A++ + R
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 446 DAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
LD + ++ L K G + A + EM+
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 91/204 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ +I LCK + + ++ + M + +I + ++ + ++ ++ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
++PD+ +F+ L+ + G L A ++ K + + + D+ TY +L+ G C+ +++
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L + T +I+ + K ++ + R DT ++ L
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
+LG+ E AK + +EM RR+
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRV 453
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 5/237 (2%)
Query: 246 FKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACG 305
F F N + +L++ D + +T L N + YNTLI CKL +I + ++ MA
Sbjct: 215 FCFAGNIDVALTLFDKM-ETKGCLPN----VVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 306 QYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAA 365
N+ S+N ++N L +M+E V+ M G S D ++N L+ YC GN A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 366 SKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISA 425
M + L TY +L+ C+AG + A+ L ++ + T+ ++
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 426 FLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
F + GY +A + + + ++ L + G+ E+A VL++M+ + L
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 73/148 (49%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y +LI +CK + ++ +D M N ++ +++ + + M EA+ V+ M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G SP + ++N L+ +C G + A +++ ++E+ L D +Y ++ G CR+ V+
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAF 426
AL V R + + + T+ +I F
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGF 495
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN LI C I +L + D M N+ ++N +++ +K+++ + ++ M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ P++ S+N ++ C G + S ++ + D TY+ L+ G C+ G
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL++ + + T+ +I + K G +A++F+ R + ++ L
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 459 SKLVKLGRFEEAKVVLKEM 477
+ G EA VL+EM
Sbjct: 388 DGFSQKGYMNEAYRVLREM 406
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 111/237 (46%), Gaps = 5/237 (2%)
Query: 250 ANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL 309
N N ++ LD + R+ Y TL+ + + E+ ++ M +
Sbjct: 359 GNMNRAMEFLDQM-----RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ ++N ++N KME+A V++ MK G+SPD+ S++ +L+ +C + ++ A ++
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ + E+ + D+ TY +L+ G C + + A + + + T+ +I+A+
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
G +A++ + D ++ +L + L K R EAK +L ++ V SD
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 12/224 (5%)
Query: 266 LARLDNGF------------ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICS 313
L ++D+GF + +YN +I LC+ R+KE ++ M Y L+ +
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 314 FNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIE 373
+N ++ +A + M G++P + ++ L+ + C GN+ A + + ++
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 374 EEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYA 433
L + RTY LV G + G + A VLR + D+ T+ +I+ G
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 434 QAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
A+ + + + D S+ + S + +EA V +EM
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 237 DNCYNSTNTFKFIANTNNSLSILDDVTQT--LARLDNGFARMSAYNTLIARLCKLDR-IK 293
D CY++++ F + + + LS++D LA+ + +YN ++ + R I
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 187
Query: 294 ESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLL 353
+ ++ M Q N+ ++N ++ ++ A + D M+T G P++ ++N L+
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 354 TAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVH 413
YC + K+++ + + L + +Y+ ++ G CR G+++ VL +
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 414 ALHSTHLHIISAFLKLGYYAQAVKF--VMIYAGRDAALDTESFGLLASKLVKLGRFEEAK 471
T+ +I + K G + QA+ M+ G ++ T + L + K G A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT--YTSLIHSMCKAGNMNRAM 365
Query: 472 VVLKEMQGRRLVMSDK 487
L +M+ R L +++
Sbjct: 366 EFLDQMRVRGLCPNER 381
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN L+ CKL +KE+ IV++M ++C++N ++N L + M E ++D M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K++ + PD+ ++N L+ G + A K+M+++E + + A+ T++ + C+ K
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 398 EGALMVLRRIEDDKVHALHS---THLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF 454
E ++ + D +H T+ +I A+LK+G + A++ + + ++T +
Sbjct: 397 EAVTRKVKELVD--MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 455 GLLASKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
+ L K + +EA +L R ++ +
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
NT++ LCK ++ E+ ++++ + ++ ++ ++ +K+E+A + D MK
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
V ++P +++FN L+ C++G A + + E L D T+++++LG C+ G+VE
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
A + T +++ K G +A+ F + +DT ++ + S
Sbjct: 575 AFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-EEREVDTVTYNTMIS 633
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
K + +EA +L EM+ + L
Sbjct: 634 AFCKDKKLKEAYDLLSEMEEKGL 656
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 3/204 (1%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
Y TLI + ++++++L + D M + + +FN ++ L K E A D +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G+ PD ++FN ++ YC G + A + + D+ T + L+ G C+ G
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 398 EGALMVLRR-IEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
E AL IE+ +V + T+ +ISAF K +A + + D ++
Sbjct: 608 EKALNFFNTLIEEREVDTV--TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 457 LASKLVKLGRFEEAKVVLKEMQGR 480
S L++ G+ E +LK+ G+
Sbjct: 666 FISLLMEDGKLSETDELLKKFSGK 689
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 280 NTLIARLCKLDR---IKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID- 335
NTL+ L + I + + D M LN+ +FN ++N K+E+A +++
Sbjct: 170 NTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLER 229
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M+ V+PD ++N +L A G L +++ +++ L + TY+ LV G C+ G
Sbjct: 230 MVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
++ A ++ ++ V T+ +I+ G + ++ + D ++
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 456 LLASKLVKLGRFEEAKVVLKEMQ 478
L +LG EA+ ++++M+
Sbjct: 350 TLIDGCFELGLSLEARKLMEQME 372
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 271 NGFAR-MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE 329
+GF+ + Y+TLI K+ + +L ++ M +N + N IL++L +K++E
Sbjct: 410 HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 330 AWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVL 389
A ++++ G D ++ L+ + + A +M +++ ++ T+++L+
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 390 GACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL 449
G C GK E A+ + + + ST II + K G +A +F
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 450 DTESFGLLASKLVKLGRFEEA 470
D + +L + L K G E+A
Sbjct: 590 DNYTCNILLNGLCKEGMTEKA 610
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
++L+ C RI E++ +VD M Y N +FN +++ L K EA +ID M
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 214
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G+ A ++ ++E+ +L Y+ ++ G C+ ++
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
AL + + +E + T+ +IS G ++ A + + R D +F L
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
VK G+ EA+ + EM R +
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSI 357
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEA 330
F + YNTLI CK R++E + + M+ Q GL N ++N ++ L + A
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMS--QRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
+ M + GV P+I ++N LL C NG L A + + ++ ++ TY+ ++ G
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
C+AGKVE + + V + +IS F + G +A
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y++LI C DR+ E+ + + M ++ ++N ++ K++EE V M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ + ++N L+ G+ A ++ K + + + + TY+ L+ G C+ GK+E
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A++V ++ K+ T+ +I K G + + D ++ +
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S + G EEA + KEM+
Sbjct: 544 SGFCRKGSKEEADALFKEMK 563
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 254 NSLSILDDVTQTLARLDNGFAR-----MSAYNTLIARLCKLDRIKESLHIVDIMACGQYG 308
+ L + + ++ +A +D A+ + Y ++ LCK + ++++ M G+
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
+ +N I++ L K M++A ++ M+T G+ P++ +++ L++ C G AS++
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGA-----LMVLRRIEDDKVHALHSTHLHII 423
+ + E ++ D T+ AL+ + GK+ A MV R I+ V T+ +I
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV-----TYSSLI 368
Query: 424 SAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ F +A + + D ++ L K R EE V +EM R LV
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ LI C+ ++ +L ++ M Y NI + + +LN K++ EA ++D M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G P+ +FN L+ + A ++ R+ + D TY +V G C+ G +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L ++E K+ + II K + A+ + + ++ L
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
S L GR+ +A +L +M R++
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKI 322
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 68/129 (52%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YNTL+ LCK ++++++ + + + + I ++N ++ + K+E+ W + +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GV PD+ ++N +++ +C G+ A + K ++E+ +S Y+ L+ R G E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 399 GALMVLRRI 407
+ +++ +
Sbjct: 589 ASAELIKEM 597
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 105/240 (43%), Gaps = 15/240 (6%)
Query: 262 VTQTLARLDNGFA-----RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNP 316
+++ +A +D F +NTLI L ++ E++ ++D M ++ ++
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 317 ILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEE 376
++N L R + A+++++ M+ + P + +N ++ C ++ A + K +E +
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
+ + TY +L+ C G+ A +L + + K++ T +I AF+K G +A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLRKYCNSDV 496
K R ++ L + R +EAK + + M + K+C DV
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM----------VSKHCFPDV 396
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YN +I LC+ R +L +V M Y ++ + + ++N ++ +A ++ M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ +G PD+ +N ++ C G + A ++ R+E + + AD+ TY++LV G C +G+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A ++R + + T +I F+K G +++A+K R D ++ L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 458 ASKLVKLGRFEEAKVVLKEM 477
+ L GR +EAK +L M
Sbjct: 286 INGLCMHGRVDEAKQMLDLM 305
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 303 ACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL 362
CG G ++ S+N ++N L + A V+ M G PD+ + + L+ +C +
Sbjct: 97 VCG-IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
A ++ ++EE D Y+ ++ G+C+ G V A+ + R+E D V A T+ +
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 423 ISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
++ G ++ A + + RD + +F + VK G+F EA + +EM RR
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT-RRC 274
Query: 483 VMSD 486
V D
Sbjct: 275 VDPD 278
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 106/232 (45%), Gaps = 5/232 (2%)
Query: 249 IANTNNSLSILDDVTQTLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDIMACGQ 306
I + + + +++D + R++ R A YN+L+A LC R ++ ++ M
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 307 YGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAAS 366
N+ +F +++ K EA + + M V PD+ ++N L+ C +G + A
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 367 KMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAF 426
+M+ + + D TY+ L+ G C++ +V+ + R + + T+ II +
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 427 LKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ G A + I++ D+ + ++ +L L R E+A V+ + MQ
Sbjct: 360 FQAGRPDAAQE---IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN+LI LC R+ E+ ++D+M ++ ++N ++N K+++E + M
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM 340
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G+ D ++N ++ Y G AA ++ R++ + RTY L+ G C +V
Sbjct: 341 AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRV 397
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
E AL++ ++ ++ +T+ +I K+G A + + D S+ +
Sbjct: 398 EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTM 457
Query: 458 ASKLVKLGRFEEAKVVLKEMQ 478
S + +++++ ++ ++MQ
Sbjct: 458 ISGFCRKRQWDKSDLLYRKMQ 478
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ ++N ++N L +++EA ++D+M T G PD+ ++N L+ +C + + +K+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ + + L D+ TY+ ++ G +AG+ + A + R++ +S L+ + ++
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRV 397
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+A+ + LD ++ ++ + K+G E+A + + + + L
Sbjct: 398 ---EKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 200 NSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSIL 259
PD V Y+ L+N + + + L + A+ T T+ I
Sbjct: 309 GCLPD---VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 260 DDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILN 319
D + +R+D+ + Y+ L+ LC R++++L + + M + L+I ++N +++
Sbjct: 366 DAAQEIFSRMDSR-PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 320 SLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+ +E+AW + + G+ PD+ S+ +++ +C + + ++++E+ L
Sbjct: 425 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 9/240 (3%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD V Y+ LVN +E + LN C + T I + S D
Sbjct: 272 PD---VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 263 TQTLA-RLDNGFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPIL 318
+ LA L GF+ + +N LI LC+ + ++ I++ M Q+G N S+NP+L
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP--QHGCQPNSLSYNPLL 386
Query: 319 NSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELG 378
+ KKM+ A ++ M + G PDI ++N +LTA C +G + A +++ ++ +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 379 ADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
TY+ ++ G +AGK A+ +L + + T+ ++ + G +A+KF
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 3/199 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN +I+ CK I +L ++D M+ ++ ++N IL SL K+++A V+D M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
PD+ ++ L+ A C + + A K++ + + D TY+ LV G C+ G+++
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A+ L + TH I+ + G + A K + + + +F +L
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 459 SKLVKLGRFEEAKVVLKEM 477
+ L + G A +L++M
Sbjct: 352 NFLCRKGLLGRAIDILEKM 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 119/273 (43%), Gaps = 5/273 (1%)
Query: 200 NSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSIL 259
+ +PD V Y L+ A R+ LL++ C T+ + N L
Sbjct: 234 DCYPD---VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 260 DDVTQTLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
D+ + L + + + + +N ++ +C R ++ ++ M + ++ +FN +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+N L + + A +++ M G P+ S+N LL +C + A + ++R+
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
D TY+ ++ C+ GKVE A+ +L ++ + T+ +I K G +A+K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 438 FVMIYAGRDAALDTESFGLLASKLVKLGRFEEA 470
+ +D DT ++ L L + G+ +EA
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 121/260 (46%), Gaps = 12/260 (4%)
Query: 230 LLNKRARDNCYNSTNTFKFI-------ANTNNSLSILDDVTQTLARLDNGFARMSAYNTL 282
+L++ + +CY T+ + + +++ +LD++ D + YN L
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD-----VVTYNVL 280
Query: 283 IARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGV 342
+ +CK R+ E++ ++ M N+ + N IL S+ S + +A ++ M G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 343 SPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALM 402
SP + +FN L+ C G L A +++++ + +S +Y+ L+ G C+ K++ A+
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 403 VLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLV 462
L R+ + T+ +++A K G AV+ + + + + ++ + L
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 463 KLGRFEEAKVVLKEMQGRRL 482
K G+ +A +L EM+ + L
Sbjct: 461 KAGKTGKAIKLLDEMRAKDL 480
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YN L+ CK ++ ++ ++ M +I ++N +L +L K+E+A +++ +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G SP + ++N ++ G A K++ + ++L D+ TY +LV G R GKV
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A+ E + T I+ K +A+ F++ R + S+ +L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRLV 483
L G +EA +L E+ + L+
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLM 586
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Query: 281 TLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTV 340
TLI C+L + +++ I++I+ ++ ++N +++ ++ A V+D M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 341 GVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGA 400
VSPD+ ++N +L + C +G L A +++ R+ + + D TY L+ CR V A
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 401 LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASK 460
+ +L + D T+ +++ K G +A+KF+ + + ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 461 LVKLGRFEEAKVVLKEM 477
+ GR+ +A+ +L +M
Sbjct: 319 MCSTGRWMDAEKLLADM 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 3/163 (1%)
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
L + ++EE + ++ M G PDI L+ +C G A+K+++ +E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
D TY+ ++ G C+AG++ AL VL R+ V T+ I+ + G QA++
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 438 FVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+ RD D ++ +L + A +L EM+ R
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%)
Query: 270 DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE 329
D+ A Y TLI C+++ I E+L + ++M + + ++N IL L ++ E
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 330 AWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVL 389
A ++ M + PD + N L+ AYC ++++A K+ K++ E L D +Y AL+
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 390 GACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL 449
G C+ ++E A L + + ++T+ ++ F + K + + R
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Query: 450 DTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
D + L ++ KL + + AKV+ + M+ + LV
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
NI +N ++++ + E+A ++ M+ GV PDI ++N L++ YC A +
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
R+E + + TY++ + G R G++ A + R I+DD V A H T+ +I + ++
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRM 320
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+A++ + R + ++ + KL + GR EA +L EM G+++
Sbjct: 321 NDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 208 VAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLA 267
V Y L++ +E D + + LL++ + + T+ I N +++ + +
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 268 RLDNGF--ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRK 325
+ A Y TL+ CK + ++ I+ M I +FN ++N
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 326 KMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYD 385
+E+ +++ M G++P+ T+FN L+ YC NL AA+ + K + +G D +TY+
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Query: 386 ALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
LV G C+A ++ A + + ++ ST+ +I FLK + +A
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 1128
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 49/244 (20%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+++YN +I +C+L RIKE+ H++ +M Y ++ S++ ++N ++++ W +I+
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 336 MMK-----------------------------------TVGVSPDITSFNYLLTAYCYNG 360
+MK G+ PD + L+ +C G
Sbjct: 749 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808
Query: 361 NLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV--EGAL---MVLRRIEDDKVHAL 415
++ AASK + ++ D TY A++ G C+ G + G L M + +E D V
Sbjct: 809 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV--- 865
Query: 416 HSTHLHIISAFLKLGYYAQAVKF--VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVV 473
T +I+ + K G+ A + MI AG + + ++ L L K G + A +
Sbjct: 866 --TFTELINGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 474 LKEM 477
L EM
Sbjct: 922 LHEM 925
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 105/219 (47%), Gaps = 5/219 (2%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y +I+ C++ + E+ + M C + +F ++N M++A+ V + M
Sbjct: 832 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G SP++ ++ L+ C G+L +A++++ + + L + TY+++V G C++G +E
Sbjct: 892 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A+ ++ E ++A T+ ++ A+ K G +A + + G+ +F +L
Sbjct: 952 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 1011
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL-----VMSDKLRKYC 492
+ G E+ + +L M + + + +++YC
Sbjct: 1012 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 90/202 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ LI CK +K++ + + M N+ ++ +++ L ++ A ++ M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G+ P+I ++N ++ C +GN+ A K++ E L AD+ TY L+ C++G+++
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L+ + + T +++ F G K + + A + +F L
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Query: 459 SKLVKLGRFEEAKVVLKEMQGR 480
+ + A + K+M R
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSR 1068
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDMM 337
N + RL K D K + I+ + G+ N+ S+N +++ + +++EA H++ +M
Sbjct: 657 NVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM 715
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G +PD+ S++ ++ YC G L K+++ ++ + L +S Y +++ CR K+
Sbjct: 716 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 775
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A + + + +I F K G A KF RD D ++ +
Sbjct: 776 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL-----VMSDKLRKYCNS 494
S ++G EA + EM + L ++ + YC +
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 877
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 35/239 (14%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y ++I LC++ ++ E+ M + + +++ R + A M
Sbjct: 762 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ ++PD+ ++ +++ +C G+++ A K+ + + L DS T+ L+ G C+AG ++
Sbjct: 822 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 399 GALMVLRRI------------------------EDDKVHALHS-----------THLHII 423
A V + D LH T+ I+
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 424 SAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ K G +AVK V + DT ++ L K G ++A+ +LKEM G+ L
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 208 VAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLA 267
V Y L++ +E D + + LL++ + + T+ I N +++ + +
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 268 RLDNGF--ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRK 325
+ A Y TL+ CK + ++ I+ M I +FN ++N
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 326 KMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYD 385
+E+ +++ M G++P+ T+FN L+ YC NL AA+ + K + +G D +TY+
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Query: 386 ALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
LV G C+A ++ A + + ++ ST+ +I FLK + +A
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 1128
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 49/244 (20%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+++YN +I +C+L RIKE+ H++ +M Y ++ S++ ++N ++++ W +I+
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 748
Query: 336 MMK-----------------------------------TVGVSPDITSFNYLLTAYCYNG 360
+MK G+ PD + L+ +C G
Sbjct: 749 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 808
Query: 361 NLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV--EGAL---MVLRRIEDDKVHAL 415
++ AASK + ++ D TY A++ G C+ G + G L M + +E D V
Sbjct: 809 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV--- 865
Query: 416 HSTHLHIISAFLKLGYYAQAVKF--VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVV 473
T +I+ + K G+ A + MI AG + + ++ L L K G + A +
Sbjct: 866 --TFTELINGYCKAGHMKDAFRVHNHMIQAG--CSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 474 LKEM 477
L EM
Sbjct: 922 LHEM 925
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 105/219 (47%), Gaps = 5/219 (2%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y +I+ C++ + E+ + M C + +F ++N M++A+ V + M
Sbjct: 832 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G SP++ ++ L+ C G+L +A++++ + + L + TY+++V G C++G +E
Sbjct: 892 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A+ ++ E ++A T+ ++ A+ K G +A + + G+ +F +L
Sbjct: 952 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 1011
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL-----VMSDKLRKYC 492
+ G E+ + +L M + + + +++YC
Sbjct: 1012 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 90/202 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ LI CK +K++ + + M N+ ++ +++ L ++ A ++ M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G+ P+I ++N ++ C +GN+ A K++ E L AD+ TY L+ C++G+++
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L+ + + T +++ F G K + + A + +F L
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046
Query: 459 SKLVKLGRFEEAKVVLKEMQGR 480
+ + A + K+M R
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSR 1068
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDMM 337
N + RL K D K + I+ + G+ N+ S+N +++ + +++EA H++ +M
Sbjct: 657 NVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM 715
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G +PD+ S++ ++ YC G L K+++ ++ + L +S Y +++ CR K+
Sbjct: 716 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 775
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A + + + +I F K G A KF RD D ++ +
Sbjct: 776 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL-----VMSDKLRKYCNS 494
S ++G EA + EM + L ++ + YC +
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 877
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 35/239 (14%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y ++I LC++ ++ E+ M + + +++ R + A M
Sbjct: 762 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 821
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ ++PD+ ++ +++ +C G+++ A K+ + + L DS T+ L+ G C+AG ++
Sbjct: 822 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 881
Query: 399 GALMVLRRI------------------------EDDKVHALHS-----------THLHII 423
A V + D LH T+ I+
Sbjct: 882 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 941
Query: 424 SAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ K G +AVK V + DT ++ L K G ++A+ +LKEM G+ L
Sbjct: 942 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 4/207 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICS-FNPILNSLTSRKKMEEAWHVIDMM 337
YN LI CK D +KE+L + + GQ + +N ++++ K+++ + + + M
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVK-GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G+ PD+ ++N L+ C NGN+ AA K+ ++ + L D T+ L+ G CR G+
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGES 486
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKF-VMIYAGRDAALDTESFGL 456
A M+L+ + + H T+ ++ + K G A + R ++ S+ +
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Query: 457 LASKLVKLGRFEEAKVVLKEMQGRRLV 483
L + G+ E+A ++L EM + LV
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS---LTSRKKMEEAWHVID 335
+N +I LCK ++ ++ +++ M N+ S+N +++ L KM +A V+
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M VSP++T+FN L+ + + NL + K+ K + ++++ + +Y++L+ G C G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
K+ A+ + ++ V T+ +I+ F K +A+ G+ A T +
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 456 LLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+L KLG+ ++ + +EM+ +V
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIV 433
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 6/222 (2%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
++ +N LI K D + S+ + M N+ S+N ++N L + K+ EA + D
Sbjct: 296 LTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRD 355
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M + GV P++ ++N L+ +C N L A M ++ + +R Y+ L+ C+ G
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
K++ + +E + + T+ +I+ + G A K + D +F
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFH 474
Query: 456 LLASKLVKLGRFEEAKVVLKEM-----QGRRLVMSDKLRKYC 492
+L + G +A ++LKEM + R L + ++ YC
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
++TL+ C R+ E++ +VD M + ++ + + ++N L + ++ EA +ID M
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PD ++ +L C +GN A + +++EE + A Y ++ C+ G +
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL + +E + A T+ +I G + K + GR+ D +F L
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 459 SKLVKLGRFEEAKVVLKEMQGR 480
VK G+ EAK + EM R
Sbjct: 323 DVFVKEGKLLEAKELYNEMITR 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%)
Query: 274 ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHV 333
A + Y++LI LC + + ++ M ++ +F+ +++ K+ EA +
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 334 IDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACR 393
+ M T G++PD ++N L+ +C L A++M + + D TY L+ C+
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 394 AGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTES 453
A +V+ + + R I + T+ ++ F + G A + R +
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 454 FGLLASKLVKLGRFEEAKVVLKEMQGRRLVMS 485
+G+L L G +A + ++MQ R+ +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
+F+ ++N ++ EA ++D M + PD+ + + L+ C G + A ++ R+
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
E D TY ++ C++G AL + R++E+ + A + +I + K G +
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
A+ + D ++ L L G++++ +L+EM GR ++
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 58/110 (52%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y L+ LC + ++L I + M + L I +N I++ + + K+++AW + +
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
GV PD+ ++N ++ C G+L A + ++++E+ D TY+ L+
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ LI CK R+ + + + ++ N ++N ++ K+ A + M
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ GV P + ++ LL C NG L A ++ +++++ + Y+ ++ G C A KV+
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
A + + D V T+ +I K G ++A
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 274 ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHV 333
A + Y+ +I LCK ++L + + M ++ +++ ++ L + K ++ +
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 334 IDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACR 393
+ M + PD+ +F+ L+ + G L+ A ++ + + D+ TY++L+ G C+
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 394 AGKVEGA-----LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA 448
+ A LMV + E D V T+ +I+++ K ++ + +
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIV-----TYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 449 LDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+T ++ L + G+ AK + +EM R
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 5/282 (1%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y +VN + D ++ LL K + + I + + ++D
Sbjct: 218 PDLFT---YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 263 TQTLARLDNGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+DN R + YN+LI LC R ++ ++ M + N+ +F+ ++++
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
K+ EA + D M + PDI +++ L+ +C + L A M + + ++ +
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM 440
TY+ L+ G C+A +VE + + R + + T+ +I + G A K
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 441 IYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
D ++ +L L K G+ E+A VV + +Q ++
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
++L+ C RI E++ +VD M +Y N +FN +++ L K EA +ID M
Sbjct: 154 SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 213
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G++ A ++K++E+ ++ AD Y ++ C V
Sbjct: 214 RGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVND 273
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
AL + +++ + T+ +I G ++ A + + R + +F L
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
VK G+ EA+ + EM R +
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSI 356
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEA 330
F + YNTLI CK R++E + + M+ Q GL N ++N ++ L + A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMS--QRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
+ M + GV PDI +++ LL C G L A + + +++ ++ D TY+ ++ G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
C+AGKVE + + V + +IS F + G +A
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y++LI C DR+ E+ H+ ++M N+ ++N ++ K++EE + M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ + ++N L+ G+ A K+ K++ + + D TY L+ G C+ GK+E
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL+V ++ K+ T+ +I K G + + + + +
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S + G EEA + +EM+
Sbjct: 543 SGFCRKGLKEEADALFREMK 562
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YN LI C+ ++ +L ++ M Y +I + + +LN K++ EA ++D M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ P+ +FN L+ + A ++ R+ D TY +V G C+ G +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ AL +L+++E K+ A + II A A+ + + ++ L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL 482
L GR+ +A +L +M R++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKI 321
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 60/117 (51%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ L+ LCK +++++L + + + + +I ++N ++ + K+E+ W + +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
GV P++ + +++ +C G A + + ++E+ +S TY+ L+ R G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 11/282 (3%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K V ++ L++A +E F L N+ R + + T+ + N +D+ Q
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 265 T--LARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNS 320
L F + AY +LI CK ++ +++ I M+ Q GL N ++ ++
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS--QKGLTGNTITYTTLIQG 361
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGN----LMAASKMMKRIEEEE 376
K A V M + GV P+I ++N LL CYNG LM M KR E +
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR-EMDG 420
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
+ + TY+ L+ G C GK+E ALMV + ++ T+ II K G AV
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ + ++ + S L + G EA V+ ++M+
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 250 ANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL 309
+ N +LS+ D + R D + Y +L+ LC R +++ ++ M +
Sbjct: 191 GHVNYALSLFDQMENYGIRPD-----VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ +FN ++++ K +A + + M + ++P+I ++ L+ +C G + A +M
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+E + D Y +L+ G C+ KV+ A+ + + + T+ +I F ++
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
G A + R + ++ +L L G+ ++A ++ ++MQ R +
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
+I +F ++N +MEEA +++ M +G+ PD+ + ++ + C NG++ A +
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
++E + D Y +LV G C +G+ A +LR + K+ T +I AF+K
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 430 GYYAQA 435
G + A
Sbjct: 261 GKFLDA 266
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 4/204 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDM 336
Y T+I LCK + +L + D M YG+ ++ + ++N L + + +A ++
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQME--NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M + PD+ +FN L+ A+ G + A ++ + + + TY +L+ G C G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
V+ A + +E + +I+ F K A+K + + +T ++
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 457 LASKLVKLGRFEEAKVVLKEMQGR 480
L ++G+ A+ V M R
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSR 381
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 18/221 (8%)
Query: 257 SILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNP 316
SI+D +L N A+M ++ +I LC +I H D+ C N
Sbjct: 71 SIID-----FTKLLNVIAKMKKFDVVI-NLCDHLQIMGVSH--DLYTC----------NL 112
Query: 317 ILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEE 376
++N + A + M +G PDI +F L+ +C + A M+ ++ E
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
+ D Y ++ C+ G V AL + ++E+ + + +++ G + A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ R D +F L VK G+F +A+ + EM
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 90/205 (43%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+ +LI C +R++E++ +V+ M ++ + I++SL + A + D M
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G+ PD+ + L+ C +G A +++ + + ++ D T++AL+ + GK
Sbjct: 204 ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKF 263
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A + + + T+ +I+ F G +A + + + D ++ L
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSL 323
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL 482
+ K + ++A + EM + L
Sbjct: 324 INGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 79/173 (45%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
+I F +LN + KK + ++ D ++ +GVS D+ + N L+ +C + AS +
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
++ + D T+ +L+ G C ++E A+ ++ ++ + + + II + K
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
G+ A+ D + L + L GR+ +A +L+ M R++
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 106/221 (47%), Gaps = 8/221 (3%)
Query: 268 RLDNGF---ARMSAYNTLIARLCKLDRIKESLHIVDIM--ACGQYGLNICSFNPILNSLT 322
R +GF + ++N+L K+ + E + +M C N+ +++ +++
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP---NVVTYSTWIDTFC 174
Query: 323 SRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSR 382
+++ A MK +SP++ +F L+ YC G+L A + K + + +
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 383 TYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIY 442
TY AL+ G C+ G+++ A + R+ +D+V + II F + G A+KF+
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 443 AGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ LD ++G++ S L G+ +EA ++++M+ LV
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y + IA LCK + ++ + M L++ ++ ++ L S+ M EA V D M
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
G+SPD F+ L+ AY GN+ AAS ++ ++ L
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 149/318 (46%), Gaps = 30/318 (9%)
Query: 174 LHHISPNCRPILSITTRFFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNK 233
+ ++ C + + RFF + F + V Y+ +++ AG R+ +M+ L+++
Sbjct: 158 VENVLKRCFKVPHLAMRFF-NWVKQKDGFSHR--VGIYNTMLSIAGEARNLDMVDELVSE 214
Query: 234 RARDNCYNSTNTFKFIANT-------NNSLSILDDVTQTLARLDNGFARMSAYNTLIARL 286
++ C T+ + + L + + + ++ LD +AYN +I L
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELD-----ATAYNIMIRSL 269
Query: 287 CKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDI 346
C R +L M + ++ +L+ + +K++ + D M + +
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH 329
Query: 347 TSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL-- 404
+F YLL ++C +G + A ++++ ++ +E+ D++ ++ LV G CRA ++ AL ++
Sbjct: 330 DAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDI 389
Query: 405 ---RRIEDDKVHALHSTHLHIISAFLKLGYYAQAV-KFVMI-YAGRDAALDTESFGLLAS 459
R+++D V+ + IIS +L+ ++A+ +F +I +GR + T + +
Sbjct: 390 MKRRKLDDSNVYGI------IISGYLRQNDVSKALEQFEVIKKSGRPPRVST--YTEIMQ 441
Query: 460 KLVKLGRFEEAKVVLKEM 477
L KL +FE+ + EM
Sbjct: 442 HLFKLKQFEKGCNLFNEM 459
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 6/228 (2%)
Query: 249 IANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYG 308
+ NT ++ S LD + + GF AY+ I LC++ +++E+L + +
Sbjct: 798 VGNTKDAKSCLDSLGKI------GFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
L+ ++ I++ L R +++A ++ MK +G P + + L+ + L +
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLK 428
+++E E TY A++ G GKVE A R +E+ T+ I+ +
Sbjct: 912 CQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQ 971
Query: 429 LGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKE 476
A+K + + A T +F + L + G+ + A++ L++
Sbjct: 972 ACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQK 1019
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 8/229 (3%)
Query: 250 ANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL 309
N + + S+ +++ + A +D + YNT++ C+ +IKESL + IM + +
Sbjct: 304 GNVDKAESVFNELDERKASID-----VVTYNTMLGGFCRCGKIKESLELWRIME-HKNSV 357
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
NI S+N ++ L K++EA + +M G + D T++ + C NG + A +M
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ +E D Y +++ C+ ++E A +++ + V +I ++
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 430 GYYAQAVKFVMIYAGRDAALDTE-SFGLLASKLVKLGRFEEAKVVLKEM 477
+A F + G++ T S+ +L L K G+F EA +KEM
Sbjct: 478 SRLGEA-SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 5/226 (2%)
Query: 252 TNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNI 311
N +L ++ +V + LD + AY ++I LCK R++E+ ++V M+ LN
Sbjct: 410 VNKALGVMQEVESSGGHLD-----VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 312 CSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKR 371
N ++ L ++ EA + M G P + S+N L+ C G AS +K
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 372 IEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGY 431
+ E D +TY L+ G CR K++ AL + + + H +I +G
Sbjct: 525 MLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGK 584
Query: 432 YAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
A+ + R+ + ++ L K+G A V+ M
Sbjct: 585 LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ YN LI CK +++ +D M + ++ S++ ++N L K+++A + D
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKR-IEEEELGADSRTYDALVLGACRA 394
M GV+PD+T +N L+ + + A ++ R +E+ + + +T++ ++ G +
Sbjct: 209 EMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF 454
G+V+ L + R++ ++ T+ +I G +A R A++D ++
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 455 GLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ + G+ +E+ + + M+ + V
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKNSV 357
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 13/281 (4%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDN-CYNSTNTFKFIANTNNSLSILDD 261
PD V Y+ L++ +E+D L ++ D+ Y + T + + + +DD
Sbjct: 217 PD---VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 262 VTQTLARLDNGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILN 319
+ R+ + Y++LI LC + ++ + + + + +++ ++N +L
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 320 SLTSRKKMEEA---WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEE 376
K++E+ W +++ +V +I S+N L+ NG + A+ + + + +
Sbjct: 334 GFCRCGKIKESLELWRIMEHKNSV----NIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
AD TY + G C G V AL V++ +E H + II K +A
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
V + L++ L L++ R EA L+EM
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 96/205 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+NTLI C+ +++E+ + M N ++N ++N + + E A+ + M
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ DI ++N L+ C A++ +K +++E L +S T+ AL++G C +
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
+ + + H T ++SAF + + A + + R LD+ + +
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLV 483
+ L G+ + K +L+EM+G++ +
Sbjct: 491 NGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 261 DVTQTLARLDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPI 317
++ Q + RL GF A +YNTLIA C+ + +L + ++M G+ GL N+ +FN +
Sbjct: 259 ELLQDMERL--GFRATDVSYNTLIAGHCEKGLLSSALKLKNMM--GKSGLQPNVVTFNTL 314
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
++ K++EA V MK V V+P+ ++N L+ Y G+ A + + + +
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGI 374
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
D TY+AL+ G C+ K A ++ ++ + + ST +I + +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 438 FV--MIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDK-LRKYCNS 494
MI +G + ++F +L S + F+ A VL+EM R + + + + + CN
Sbjct: 435 LYKSMIRSG--CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 104/247 (42%), Gaps = 2/247 (0%)
Query: 239 CYNSTNTFKFIANTNNSLSILDDVTQTLARL-DNGF-ARMSAYNTLIARLCKLDRIKESL 296
C ++ F + T L + T T ++ D GF + + N ++ L R+ +L
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 297 HIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAY 356
M + N + N +++ K+++ ++ M+ +G S+N L+ +
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 357 CYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALH 416
C G L +A K+ + + L + T++ L+ G CRA K++ A V ++ V
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 417 STHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKE 476
T+ +I+ + + G + A +F D ++ L L K + +A +KE
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 477 MQGRRLV 483
+ LV
Sbjct: 404 LDKENLV 410
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEA 330
F + AYNTLI CK R++E + + M+ Q GL N ++ +++ + + A
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
V M + GV PDI ++N LL C NGN+ A + + +++ ++ D TY ++
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
C+AGKVE + + V T+ ++S F + G +A
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 92/198 (46%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N+L+ C +RI E++ +VD M Y + +F +++ L K EA +++ M
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G A ++ ++E+ ++ AD Y+ ++ G C+ ++
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
A + ++E + T+ +IS G ++ A + + ++ D F L
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 460 KLVKLGRFEEAKVVLKEM 477
VK G+ EA+ + EM
Sbjct: 329 AFVKEGKLVEAEKLYDEM 346
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 1/193 (0%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID-MM 337
YN LI+ LC R ++ ++ M ++ FN ++++ K+ EA + D M+
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K+ PD+ ++N L+ +C + ++ + + + L ++ TY L+ G +A
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDC 407
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A MV +++ D VH T+ ++ G A+ RD LD ++ +
Sbjct: 408 DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTM 467
Query: 458 ASKLVKLGRFEEA 470
L K G+ E+
Sbjct: 468 IEALCKAGKVEDG 480
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN L+ LC ++ +L + + M L+I ++ ++ +L K+E+ W + +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
GV P++ ++ +++ +C G A + ++E+ +S TY+ L+ R G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 22/280 (7%)
Query: 202 FPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTF-KFIANTNNSLSILD 260
PDK V + +V+ +R + +LN + Y+ F ++ N+N +++I
Sbjct: 127 LPDK-AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 261 DVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMA---CGQYGLNICSFNPI 317
NG + +N +I LCKL + ++ + M C G C+ +
Sbjct: 186 ----------NGLS----FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT---L 228
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
++ L ++++EA ++D M++ G SP +N L+ C G+L +K++ + +
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC 288
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
+ TY+ L+ G C GK++ A+ +L R+ K T+ +I+ +K AV+
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Query: 438 FVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ R L+ + +L S L K G+ EEA + ++M
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 31/263 (11%)
Query: 254 NSLSILDDVTQTLARLDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNIC 312
N+L ILD LDNG + YN+L+ LCK + ++ + M N+
Sbjct: 479 NALEILD------VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
+FN +L SL +K++EA +++ MK V+PD +F L+ +C NG+L A + +++
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Query: 373 EEE-ELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGY 431
EE ++ + + TY+ ++ V A + + + D + T+ ++ F K G
Sbjct: 593 EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 432 YAQAVKFV--MIYAGRDAALDT---------------ESFGLLASKLVKLGRFEEA---- 470
KF+ M+ G +L T E+ G++ ++V+ G EA
Sbjct: 653 VNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII-HRMVQKGLVPEAVNTI 711
Query: 471 -KVVLKEMQGRRLVMSDKLRKYC 492
V KE+ +LV+ D L+K C
Sbjct: 712 CDVDKKEVAAPKLVLEDLLKKSC 734
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 10/236 (4%)
Query: 200 NSF-PDKRTV-AYYDDLVNAAGRERDFNMLHYLLNKRARDNC--YNSTNTFKFIANTNNS 255
N F PD+ T + D L + R + + L K + N YN+ I +N
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT-----LIKGLSNQ 404
Query: 256 LSILDDVTQTLARLDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSF 314
IL+ + G + +N L+ LCK+ + ++ +V +M Y +I +F
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 315 NPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEE 374
N +++ +++ KME A ++D+M GV PD+ ++N LL C + K + E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 375 EELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLG 430
+ + T++ L+ CR K++ AL +L +++ V+ T +I F K G
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+S +N L+ LCK +KE ++D + N+ ++N + L R +++ A ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
+ G PD+ ++N L+ C N A + ++ E L DS TY+ L+ G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 396 KVEGALMVLRRIEDDKV 412
V+ A RI D V
Sbjct: 336 MVQLA----ERIVGDAV 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
AY T++ + + E + M L + +FN +L L + ++E ++D +
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
GV P++ ++N + C G L A +M+ + E+ D TY+ L+ G C+ K
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
+ A + L ++ ++ + T+ +I+ + K G A + V
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 57/116 (49%)
Query: 286 LCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPD 345
CK R +L +++ M+ +N+ ++ ++ E + + M GVS
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 215
Query: 346 ITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGAL 401
+++FN LL C G++ K++ ++ + + + TY+ + G C+ G+++GA+
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y TL++ + +++ ++ I + M NIC+FN + +R K E + D +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+SPDI ++N LL + NG S + K ++ + T++ L+ R G E
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
A+ V RR+ D V ST+ +++A + G + Q+ K +
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 124/281 (44%), Gaps = 17/281 (6%)
Query: 208 VAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSI-LDDVTQTL 266
V Y L++A + + K D C + T+ I N + + +T +
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 267 ARL-DNGFARMS-AYNTLIARLCKLDRI-KESLHIVDIMACGQYGLNICSFNPILNSLTS 323
++ +G A + YNTLI CK + +E+ + + M + + ++N +L+
Sbjct: 268 EKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 324 RKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRT 383
+ +EA V++ M G SP I ++N L++AY +G L A ++ ++ E+ D T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 384 YDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYA 443
Y L+ G RAGKVE A+ + + + A ++ +AF+K+ Y KF +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRN----AGCKPNICTFNAFIKM--YGNRGKFTEMMK 440
Query: 444 GRDA------ALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
D + D ++ L + + G E V KEM+
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F + YNTLI CK R+++ + + M + ++N +++ K+ A
Sbjct: 850 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 909
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
V + M GVSPDI ++N LL C NG + A M++ +++ E+ D TY+ ++ G C
Sbjct: 910 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 969
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
R K++ A + R + V ++ +IS + G +A K
Sbjct: 970 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1015
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 4/196 (2%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
++ LI C+ R+ +L ++ M Y +I +F +L+ ++ +A+ ++ +M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G P++ +N L+ C NG L A +++ +E++ LGAD TY+ L+ G C +G+
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTESFG 455
A +LR + ++ T +I F+K G +A + MI + D + ++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP--NNVTYN 285
Query: 456 LLASKLVKLGRFEEAK 471
+ + L GR +AK
Sbjct: 286 SIINGLCMHGRLYDAK 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 93/200 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ +L+ C ++RI ++ +V +M Y N+ +N +++ L ++ A +++ M+
Sbjct: 144 FGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ D+ ++N LLT CY+G A++M++ + + + D T+ AL+ + G ++
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLD 263
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A + + + V + T+ II+ G A K + A + + ++ L
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S K +E + + M
Sbjct: 324 SGFCKFRMVDEGMKLFQRMS 343
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F + YNTLI+ CK + E + + M+C + +I ++N +++ K+ A
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ M + V+PDI + LL C NG + +A + E E Y+ ++ G C
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLG 430
+A KVE A + R+ + V T+ +I K G
Sbjct: 433 KADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
N+ ++N ++N + +A ++ D+M + G PD+ ++N L+T +C + + K+
Sbjct: 817 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 876
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ + L D+ TY+ L+ G C+AGK+ A V R+ D V T+ ++
Sbjct: 877 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 936
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
G +A+ V + +D ++ ++ L + + +EA + + + R+ V D +
Sbjct: 937 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT-RKGVKPDAI 994
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 49/217 (22%)
Query: 274 ARMSAYNTLIARLCKLDR-----------IKESLH--------IVDI------------- 301
A + YNTL+ LC R +K S++ ++D+
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 302 ---MACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCY 358
M N ++N I+N L ++ +A D+M + G P++ ++N L++ +C
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 359 NGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGAL-----MVLRRIEDDKVH 413
+ K+ +R+ E AD TY+ L+ G C+ GK+ AL MV RR+ D +
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII- 387
Query: 414 ALHSTHLH-------IISAFLKLGYYAQAVKFVMIYA 443
H LH I SA +K ++ K++ I A
Sbjct: 388 -THCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN L+ LC +I+++L +V+ + + ++I ++N I+ L K++EAW + +
Sbjct: 926 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 985
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYD 385
GV PD ++ +++ C G A K+ +R++E+ R YD
Sbjct: 986 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1032
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 307 YGL--NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMA 364
YG+ ++ SF +++ ++ A V+ M +G P I +F LL +C +
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD 159
Query: 365 ASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIIS 424
A ++ + + + Y+ L+ G C+ G++ AL +L +E + A T+ +++
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 425 AFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
G ++ A + + R D +F L VK G +EA+ + KEM
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 66/132 (50%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YNTLI C+ ++ + + + M +I ++N +L+ L + K+E+A +++ ++
Sbjct: 891 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 950
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ DI ++N ++ C L A + + + + + D+ Y ++ G CR G
Sbjct: 951 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 1010
Query: 399 GALMVLRRIEDD 410
A + RR+++D
Sbjct: 1011 EADKLCRRMKED 1022
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
+I + +LN + +EA ++D M G P++ +N ++ C N +L A ++
Sbjct: 677 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 736
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+E++ + AD+ TY+ L+ G +G+ A +LR + K+ +I F+K
Sbjct: 737 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 796
Query: 430 GYYAQA 435
G +A
Sbjct: 797 GNLLEA 802
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 114/241 (47%), Gaps = 2/241 (0%)
Query: 245 TFKFIANTNNSLSILDDVTQTLARL-DNGFAR-MSAYNTLIARLCKLDRIKESLHIVDIM 302
T+ + N + ++ +T+ L + + G +R + Y +LI CK ++E+ H+ +++
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 303 ACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL 362
+ + + +++ ++ +A V D M +GV + T N L+ YC +G L
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
+ A ++ R+ + L D TY+ LV G CRAG V+ AL + ++ +V T+ +
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 423 ISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ + ++G + + + R D S L L KLG F EA + + + R L
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 483 V 483
+
Sbjct: 503 L 503
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y L+ C+ +I++++ + D M N N ++N ++ EA + M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ PD ++N L+ YC G + A K+ ++ ++E+ TY+ L+ G R G
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
L + + + V+A + ++ A KLG + +A+K R DT + ++
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 459 SKLVKLGRFEEAKVVL 474
S L K+ + EAK +L
Sbjct: 514 SGLCKMEKVNEAKEIL 529
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 5/182 (2%)
Query: 292 IKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE--AWHVIDMMKTVGVSPDITSF 349
+K +LH+ D M G YG + +K E A HV D M + VSPD+ +
Sbjct: 171 VKNALHVFDNM--GNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTC 228
Query: 350 NYLLTAYCYNGNLMAASKMMKRIEEE-ELGADSRTYDALVLGACRAGKVEGALMVLRRIE 408
+ ++ AYC +GN+ A K E L + TY++L+ G G VEG VLR +
Sbjct: 229 SIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 288
Query: 409 DDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFE 468
+ V T+ +I + K G +A + + D +G+L + G+
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 469 EA 470
+A
Sbjct: 349 DA 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 8/179 (4%)
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
LN+ ++N ++N +E V+ +M GVS ++ ++ L+ YC G + A +
Sbjct: 259 LNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHV 318
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI----IS 424
+ ++E++L AD Y L+ G CR G++ A+ R+ D+ + T+ I I+
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAV----RVHDNMIEIGVRTNTTICNSLIN 374
Query: 425 AFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ K G +A + D ++ L + G +EA + +M + +V
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV 433
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Query: 278 AYNTLIARLCKLDRIKESLHIV-DIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
YN IA LCK +++++ + D+++ ++ + ++ +++ + +A+ + D
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M G+ P+I ++N L+ C GN+ A +++ ++ ++ + ++ TY+ L+ G ++G
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 397 VEGAL 401
V A+
Sbjct: 841 VAEAM 845
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
++ L+ KL ++E + + + +++ + N +LN L ME+ W V +M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
VG+ P+ +FN L +C + N ++++EEE D TY+ LV CR G++
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 398 EGA-----LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTE 452
+ A +M RR+ D V T+ +I K G +A + R D
Sbjct: 288 KEAFYLYKIMYRRRVVPDLV-----TYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
S+ L K G +++K +L EM G +V
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 235 ARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDN-GF-ARMSAYNTLIARLCKLDRI 292
R + +T TF + N + S +V L +++ GF + YNTL++ C+ R+
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 293 KESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYL 352
KE+ ++ IM + ++ ++ ++ L ++ EA M G+ PD S+N L
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 353 LTAYCYNGNLMAASKMMKRIEEEELGADSRTY---------------------------- 384
+ AYC G + + K++ + + D T
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 385 -------DALVLGACRAGKVEGALMVLRRIEDDKVH-ALHSTHLHIISAFLKLGYYAQAV 436
D L++ C+ GK A +L RI +++ H A T+ ++I + + +A+
Sbjct: 408 DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEAL 467
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
++ LD +++ L L ++GR EA+ ++ EM
Sbjct: 468 VLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 213 DLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLAR-LDN 271
+L+ ++ + ++ L++ A D C F + L ++++ + LD+
Sbjct: 138 ELIELTSKKEEVDVFRVLVS--ATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDS 195
Query: 272 GFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEA 330
GF+ + N L+ L KLD +++ + +M N +FN + N + E
Sbjct: 196 GFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREV 255
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
++ M+ G PD+ ++N L+++YC G L A + K + + D TY +L+ G
Sbjct: 256 DDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
C+ G+V A R+ D + ++ +I A+ K G Q+ K + G D
Sbjct: 316 LCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD 375
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ ++ V+ GR A + E+ RRL
Sbjct: 376 RFTCKVIVEGFVREGRLLSAVNFVVEL--RRL 405
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 96/204 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN +I LC+ ++ +L I+ M YG +I + N +LN ++ EA ++D M
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PD +F L+ + A +++R+ + D TY A++ G C+ G+ +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL +L ++E K+ A + +I + K + A+ + D ++ L
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
S L GR+ +A +L +M R++
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKI 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 92/203 (45%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N+L+ C +RI E++ +VD M Y + +F +++ L K EA +++ M
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G A ++ ++E+ ++ AD Y ++ C+ V+
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
AL + +++ + T+ +IS G ++ A + + R + +F L
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
K G+ EA+ + EM R +
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSI 341
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 87/192 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+N+LI K ++ E+ + D M NI ++N ++N +++EA + +M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ PD+ ++N L+ +C ++ ++ + + L ++ TY L+ G +A +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A MV +++ D VH T+ ++ K G +A+ D ++ +++
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 459 SKLVKLGRFEEA 470
+ K G+ E+
Sbjct: 493 EGMCKAGKVEDG 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 200 NSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSIL 259
+ PD V Y+ L+N + + L +R +T T+ + + S
Sbjct: 375 DCLPD---VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 260 DDVTQTLARL--DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
D+ ++ D + YNTL+ LCK ++++++ + + + + +I ++N +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+ K+E+ W + + GV PD+ ++N +++ +C G A + +++E+
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 378 GADSRTYDALVLGACRAG 395
DS TY+ L+ R G
Sbjct: 552 LPDSGTYNTLIRAHLRDG 569
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 39/246 (15%)
Query: 274 ARMSAYNTLIARLCKLDRIKESLHIV----------------DIMAC-GQYG-------- 308
A + Y+T+I LCK + ++L++ +++C YG
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 309 ----------LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCY 358
N+ +FN ++++ K+ EA + D M + P+I ++N L+ +C
Sbjct: 298 LSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM 357
Query: 359 NGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHST 418
+ L A ++ + ++ D TY+ L+ G C+A KV + + R + + T
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 419 HLHIISAFLKLGYY--AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKE 476
+ +I F + AQ V M+ G + T + L L K G+ E+A VV +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT--YNTLLDGLCKNGKLEKAMVVFEY 475
Query: 477 MQGRRL 482
+Q ++
Sbjct: 476 LQKSKM 481
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 76/161 (47%), Gaps = 1/161 (0%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
NI ++N +L+ L K+E+A V + ++ + PDI ++N + C G + +
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ + + D Y+ ++ G C+ G E A + ++++D T+ +I A L+
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEA 470
G A + + + A D ++GL+ + ++ GR ++
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTYGLV-TDMLHDGRLDKG 608
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 10/299 (3%)
Query: 202 FPDKRTVAY-YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILD 260
FP+ + Y Y+ L+ + +ER + +L T TF + S +D
Sbjct: 105 FPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVD 164
Query: 261 DVTQTLARLDNGFARMS--AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPIL 318
+ + + + + L+ CK + L +++ M N +N I+
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 319 NSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIE-EEEL 377
+S + +++ +++ M+ G+ PDI +FN ++A C G ++ AS++ +E +E L
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 378 G---ADSRTYDALVLGACRAGKVEGALMVLRRI-EDDKVHALHSTHLHIISAFLKLGYYA 433
G +S TY+ ++ G C+ G +E A + I E+D + +L S ++ + ++ G +
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW-LQGLVRHGKFI 343
Query: 434 QAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLRKYC 492
+A + + S+ +L L KLG +AK ++ M+ R V D + C
Sbjct: 344 EAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK-RNGVCPDAVTYGC 401
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN ++ CK+ ++++ + + + ++ S+N L L K EA V+ M
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ P I S+N L+ C G L A ++ ++ + D+ TY L+ G C GKV+
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L+ + + T ++ + K+G ++A + + + LDT + ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMSDKLRKYCNSDVKLVE 500
L G ++A ++K G R+ S L NS + LV+
Sbjct: 474 DGLCGSGELDKAIEIVK---GMRVHGSAALGNLGNSYIGLVD 512
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 268 RLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
R ++ A + +YN + L + + E+ ++ M G +I S+N +++ L +
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
+A ++ +MK GV PD ++ LL YC G + AA +++ + ++ T + L
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHII-SAFLKLGYYAQAVKFVM-IYAGR 445
+ + G++ A +LR++ ++K + L + +II G +A++ V +
Sbjct: 438 LHSLWKMGRISEAEELLRKM-NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 446 DAAL----------------------DTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
AAL D ++ L + L K GRF EAK + EM G +L
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 40/220 (18%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ YN+LI L ++I E ++D M NIC++N + L +K+E+A +++D
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 336 MMKTVGVSPDITSFNYLLTAYC-----------------------------YN-----GN 361
M ++P++ SF YL+ A+C +N G
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQ 713
Query: 362 LMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLH 421
L+ A+++++ + + + Y LV C+ ++E A +L ++ D + +
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMP 773
Query: 422 IISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKL 461
+I K+G +A F D ++ S G +A+K+
Sbjct: 774 VIDGLGKMGNKKEANSFA------DKMMEMASVGEVANKV 807
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 121/263 (46%), Gaps = 14/263 (5%)
Query: 229 YLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMS--AYNTLIARL 286
++LN+ + + T++ +T++ D + +T L + ++S YNTLIA L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 287 CKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDI 346
CKL K++ ++ M + + +FN +++ + +A +M G+SP++
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 347 TSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRR 406
++N ++ G + K + ++ + D TY+AL+ G + G ++G++ +
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCE 808
Query: 407 IEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGR 466
+ D + ST+ +IS F +G QA + + R + +T ++ + S L KL
Sbjct: 809 MIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCT 868
Query: 467 ------------FEEAKVVLKEM 477
EAK +LKEM
Sbjct: 869 HPDVEWNKKAMYLAEAKGLLKEM 891
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 33/227 (14%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
A N LI CK+ R+ + + ++ ++ ++N +++ L +EA+ + M
Sbjct: 131 ALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL-------------------- 377
+G+ PD S+N L+ +C GN + A ++ I E L
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247
Query: 378 --------GADSRTYDALVLGACRAGKV-EGALMVLRRIEDDKVHALHSTHLHIISAFLK 428
D T+ +++ C+ GKV EG L+ LR +E+ V+ H T+ ++ + K
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL-LREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 429 LGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLK 475
Y A+ R +D + +L L K G EA+ K
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
++++I RLCK ++ E ++ M N ++ +++SL A + M
Sbjct: 262 FSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ D+ + L+ G+L A K K + E+ + TY ALV G C+AG +
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A ++ ++ + V T+ +I+ ++K G +AV + ++ + ++G +
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
L K G+ E A + KEM+
Sbjct: 442 DGLFKAGKEEMAIELSKEMR 461
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y TL+ L K + + +L + M +++ + +++ L + EA M+
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
P++ ++ L+ C G+L +A ++ ++ E+ + + TY +++ G + G +E
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL-- 456
A+ +LR++ED V T+ +I K G A++ + R ++ ++ L
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIE--LSKEMRLIGVEENNYILDA 474
Query: 457 LASKLVKLGRFEEAKVVLKEMQGRRLVM 484
L + L ++GR +E K ++K+M + + +
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTL 502
>AT3G53170.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: glutamine biosynthetic process; LOCATED IN:
nucleolus; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G48730.1); Has
17188 Blast hits to 5538 proteins in 167 species: Archae
- 1; Bacteria - 16; Metazoa - 307; Fungi - 211; Plants -
16025; Viruses - 0; Other Eukaryotes - 628 (source: NCBI
BLink). | chr3:19704729-19706417 REVERSE
Length = 497
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 146/337 (43%), Gaps = 26/337 (7%)
Query: 163 LKIESLPFLRKLHHISPNCRPILSITTRFFATQSPNTNSF--------PDKRTVAYYDDL 214
LKI +L LRK H P C+ + + P+ S K T+ Y L
Sbjct: 128 LKIFNL--LRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSL 185
Query: 215 VNAAGR----ERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILD---DVTQTLA 267
++ G+ ++ F+ L Y+ ++ +C TF + + L D + ++
Sbjct: 186 ISVYGKSELLDKAFSTLEYM---KSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMS 242
Query: 268 RLDNGFARMSAYNTLIARLCKLDRIKESLHIV-DIMACGQYGLNICSFNPILNSLTSRKK 326
L G + ++ YNT+I K +E ++ D++ G ++C+ N I+ S + +
Sbjct: 243 YLGVGCSTVT-YNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 301
Query: 327 ME--EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTY 384
M E+W+ + +GV PDIT+FN L+ ++ G +M +E+ + TY
Sbjct: 302 MRKMESWY--SRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 385 DALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAG 444
+ ++ +AG++E V R+++ V T+ +++A+ K G + +
Sbjct: 360 NIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVN 419
Query: 445 RDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
D LDT F + + + G K + +M+ R+
Sbjct: 420 SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERK 456
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN+LI LC R ++ ++ M + N+ +FN ++++ K+ EA + + M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ PD ++N L+ +C + L A +M K + ++ + +TY+ L+ G C+ +VE
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
+ + R + + T+ II F + G A D ++ +L
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
L G+ + A V+ K +Q
Sbjct: 476 HGLCSYGKLDTALVIFKYLQ 495
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 40/223 (17%)
Query: 255 SLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSF 314
+++++D + Q + D + Y T++ LCK I +L++++ M + N+ F
Sbjct: 207 AVALVDQMVQRGCQPD-----LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 315 NPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEE 374
N I++SL + +E A + M+T G+ P++ ++N L+ C G AS+++ + E
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 375 EELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQ 434
+++ + T++AL I AF K G +
Sbjct: 322 KKINPNVVTFNAL-----------------------------------IDAFFKEGKLVE 346
Query: 435 AVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
A K R DT ++ LL + R +EAK + K M
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 92/203 (45%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
++L+ C RI +++ +VD M Y + +F +++ L K EA ++D M
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G++ A ++ ++E + A+ ++ ++ C+ VE
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
A+ + +E + T+ +I+ G ++ A + + + + +F L
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
K G+ EA+ + +EM R +
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSI 359
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 90/204 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ I C+ ++ +L ++ M Y +I + + +LN K++ +A ++D M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PD +F L+ + A ++ ++ + D TY +V G C+ G ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL +L ++E ++ A II + K + AV + + ++ L
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
+ L GR+ +A +L M +++
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKI 324
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 208 VAYYDDLVNA---AGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
V ++ L++A G+ + LH + +R+ D T T+ + N + LD+ Q
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP---DTITYNLLINGFCMHNRLDEAKQ 384
Query: 265 TLARL--DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNS 320
+ + + YNTLI CK R+++ + + M+ Q GL N ++ I+
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS--QRGLVGNTVTYTTIIQG 442
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
+ A V M + V DI +++ LL C G L A + K +++ E+ +
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 381 SRTYDALVLGACRAGKVEGA 400
Y+ ++ G C+AGKV A
Sbjct: 503 IFIYNTMIEGMCKAGKVGEA 522
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN LI C +R+ E+ + M NI ++N ++N K++E+ + M
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ + ++ ++ + G+ +A + K++ + D TY L+ G C GK++
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL++ + ++ ++ + +I K G +A ++ D ++ +
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD---LFCSLSIKPDVVTYNTMI 542
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S L +EA + ++M+
Sbjct: 543 SGLCSKRLLQEADDLFRKMK 562
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 90/198 (45%)
Query: 285 RLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSP 344
RL + ++ +++ + M + +I FN +L+++ K E + + M+T+G+S
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 345 DITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
D+ +++ + +C L A ++ ++ + D T +L+ G C + ++ A+ ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 405 RRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKL 464
++ + T +I ++AV V R D ++G + + L K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 465 GRFEEAKVVLKEMQGRRL 482
G + A +L +M+ R+
Sbjct: 237 GDIDLALNLLNKMEAARI 254
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 2/270 (0%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y +VN + D ++ LLNK F I ++ +DD ++
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 211
Query: 271 NGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
R + Y++LI+ LC R ++ ++ M + N+ +FN ++++ K
Sbjct: 212 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 271
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
EA + D M + PDI ++N L+ +C + L A +M + + ++ D TY+ L+
Sbjct: 272 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 331
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA 448
G C++ +VE + R + + T+ +I G A K
Sbjct: 332 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 391
Query: 449 LDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
D ++ +L L G+ E+A V MQ
Sbjct: 392 PDIMTYSILLDGLCNNGKLEKALEVFDYMQ 421
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 87/200 (43%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN+LI C DR+ ++ + + M ++ ++N ++ K++E+ + M
Sbjct: 292 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 351
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ D ++ L+ ++G+ A K+ K++ + + D TY L+ G C GK+E
Sbjct: 352 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 411
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL V ++ ++ + +I K G + + + ++ +
Sbjct: 412 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 471
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S L +EA +LK+M+
Sbjct: 472 SGLCSKRLLQEAYALLKKMK 491
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 66/129 (51%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ L+ LC +++++L + D M + L+I + ++ + K+++ W + +
Sbjct: 397 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 456
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GV P++ ++N +++ C L A ++K+++E+ DS TY+ L+ R G
Sbjct: 457 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 516
Query: 399 GALMVLRRI 407
+ ++R +
Sbjct: 517 ASAELIREM 525
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 94/199 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ TLI L ++ E++ +VD M N+ ++ ++N L R ++ A+++++ M+
Sbjct: 117 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ D+ FN ++ + C ++ A + K +E + + + TY +L+ C G+
Sbjct: 177 AAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 236
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L + + K++ T +I AF+K G + +A K R D ++ L
Sbjct: 237 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 296
Query: 459 SKLVKLGRFEEAKVVLKEM 477
+ R ++AK + + M
Sbjct: 297 NGFCMHDRLDKAKQMFEFM 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 283 IARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGV 342
IA++ K D + + +M G Y +I + + +LN K++ +A ++D M +G
Sbjct: 52 IAKMKKFDLVISLALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 110
Query: 343 SPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALM 402
PD +F L+ + A ++ R+ + + TY +V G C+ G ++ A
Sbjct: 111 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 170
Query: 403 VLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLV 462
+L ++E K+ A II + K + A+ + + ++ L S L
Sbjct: 171 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 230
Query: 463 KLGRFEEAKVVLKEMQGRRL 482
GR+ +A +L +M +++
Sbjct: 231 SYGRWSDASQLLSDMIEKKI 250
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/195 (17%), Positives = 83/195 (42%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ +N LI K + E+ + D M +I ++N ++N ++++A + +
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M + PD+ ++N L+ +C + + +++ + + L D+ TY L+ G G
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+ A V +++ D V T+ ++ G +A++ + LD +
Sbjct: 374 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 433
Query: 456 LLASKLVKLGRFEEA 470
+ + K G+ ++
Sbjct: 434 TMIEGMCKAGKVDDG 448
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 255 SLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSF 314
+L + D + ++ +LD + Y T+I +CK ++ + + ++ N+ ++
Sbjct: 413 ALEVFDYMQKSEIKLD-----IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 467
Query: 315 NPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEE 374
N +++ L S++ ++EA+ ++ MK G PD ++N L+ A+ +G+ A++++++ +
Sbjct: 468 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
Query: 375 EELGADSRTYDALVLGACRAGKVEGALM 402
D+ T LV G+++ + +
Sbjct: 528 CRFVGDASTI-GLVANMLHDGRLDKSFL 554
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEA 330
F + Y+TLI CK R++E + + M+ Q GL N ++ +++ + + A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
V M +VGV P+I ++N LL C NG L A + + ++ + D TY+ ++ G
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
C+AGKVE + + V + +IS F + G +A + +
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ ++ L ++ G E + ++KEM+
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
++L+ C RI +++ +VD M Y + +F +++ L K EA ++D M
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G++ A ++K++E+ ++ AD Y+ ++ G C+ ++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
AL + +++ + T+ +IS G ++ A + + R + +F L
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
VK G+ EA+ + EM R +
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSI 359
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 9/280 (3%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y +VN + D ++ LL K + + I + +DD
Sbjct: 221 PDLVT---YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 263 TQTLARLDNGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+DN R + Y++LI+ LC R ++ ++ M + N+ +F+ ++++
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
K+ EA + D M + PDI +++ L+ +C + L A M + + ++ +
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL--GYYAQAVKF 438
TY L+ G C+A +VE + + R + + T+ +I F + AQ V
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 439 VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
M+ G + T + +L L K G+ +A VV + +Q
Sbjct: 458 QMVSVGVHPNILT--YNILLDGLCKNGKLAKAMVVFEYLQ 495
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N+L+ C +RI +++ +VD M Y + +F +++ L K EA +ID M
Sbjct: 757 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 816
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G+ A ++ ++E ++ A+ Y ++ C+ +
Sbjct: 817 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 876
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
AL + +E+ V T+ +IS G ++ A + + R + +F L
Sbjct: 877 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 936
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
VK G+ +A+ + +EM R +
Sbjct: 937 AFVKKGKLVKAEKLYEEMIKRSI 959
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDM 336
YNTLI CK R+ + + + M+ Q GL N ++ +++ + + A V
Sbjct: 1001 YNTLINGFCKAKRVDKGMELFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 1058
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M +VGV P+I ++N LL C NG L A + + ++ + D TY+ ++ G C+AGK
Sbjct: 1059 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 1118
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ I C+ ++ +L ++ M Y +I + + +LN K++ +A ++D M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PD +F L+ + A ++ ++ + D TY +V G C+ G ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL +L+++E K+ A + II K + A+ + D ++ L
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
S L GR+ +A +L +M R++
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKI 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN LI C+ R+ +L ++ M Y +I + N +LN ++ +A ++D M
Sbjct: 721 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 780
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PD +F L+ + A ++ R+ + D TY A+V G C+ G +
Sbjct: 781 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 840
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL +L ++E K+ A + +I + K + A+ + + ++ L
Sbjct: 841 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 900
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
S L GR+ +A +L +M R++
Sbjct: 901 SCLCNYGRWSDASRLLSDMIERKI 924
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 125/280 (44%), Gaps = 9/280 (3%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y +VN + D ++ LLNK + + + ++ DD
Sbjct: 821 PDLVT---YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 877
Query: 263 TQTLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
++N R + Y++LI+ LC R ++ ++ M + N+ +F+ ++++
Sbjct: 878 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 937
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
+ K+ +A + + M + P+I +++ L+ +C L A +M++ + ++ +
Sbjct: 938 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 997
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL--GYYAQAVKF 438
TY+ L+ G C+A +V+ + + R + + T+ +I F + AQ V
Sbjct: 998 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 1057
Query: 439 VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
M+ G + T + +L L K G+ +A VV + +Q
Sbjct: 1058 QMVSVGVHPNILT--YNILLDGLCKNGKLAKAMVVFEYLQ 1095
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 89/194 (45%)
Query: 285 RLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSP 344
RL + ++ +++ + M + +I FN +L+++ K E + + M+T+G+S
Sbjct: 57 RLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH 116
Query: 345 DITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
D+ +++ + +C L A ++ ++ + D T +L+ G C + ++ A+ ++
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 405 RRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKL 464
++ + T +I ++AV V R D ++G + + L K
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 465 GRFEEAKVVLKEMQ 478
G + A +LK+M+
Sbjct: 237 GDIDLALSLLKKME 250
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+N +I C+ ++ + I+D M N+ +++ ++N K++EA D +
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K G+ D + L+ +C NG A K++ ++ AD+ TY+ ++ G G+
Sbjct: 330 KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRS 389
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
E AL +L + + VH ++ I++A G +AVKF+ + + R ++ L
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNEL 449
Query: 458 ASKLVKLGRFEEAKVVL 474
+L + G E VL
Sbjct: 450 VVRLCESGYTEIGVRVL 466
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 203 PDKRTVAYYDDLVNAAGR----ERDFNMLHYLLNKRARDNCYNST---NTFKFIANTNNS 255
PD T ++ ++N R ER +L ++ N YN + N F + +
Sbjct: 266 PDPVT---FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEA 322
Query: 256 LSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFN 315
D+V +T +LD Y TL+ C+ E++ ++ M + + ++N
Sbjct: 323 KQTFDEVKKTGLKLDT-----VGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEE 375
IL L+S + EEA ++D + GV + S+ +L A C NG L A K + + E
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 376 ELGADSRTYDALVLGACRAGKVEGALMVL 404
+ T++ LV+ C +G E + VL
Sbjct: 438 GIWPHHATWNELVVRLCESGYTEIGVRVL 466
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 110/252 (43%), Gaps = 13/252 (5%)
Query: 230 LLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKL 289
+ N + +C N F F+ V + + R + Y+TL+ L
Sbjct: 198 IFNILVKHHCKNGDINFAFL------------VVEEMKRSGISYPNSITYSTLMDCLFAH 245
Query: 290 DRIKESLHIV-DIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITS 348
R KE++ + D+++ + +FN ++N ++E A ++D MK G +P++ +
Sbjct: 246 SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 349 FNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIE 408
++ L+ +C G + A + +++ L D+ Y L+ CR G+ + A+ +L ++
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 409 DDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFE 468
+ A T+ I+ G +A++ + + L+ S+ ++ + L G E
Sbjct: 366 ASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELE 425
Query: 469 EAKVVLKEMQGR 480
+A L M R
Sbjct: 426 KAVKFLSVMSER 437
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVS-PDITSFNYLLTA-YCYNGNLMAASK 367
N C FN ++ + A+ V++ MK G+S P+ +++ L+ + ++ + A
Sbjct: 195 NTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVEL 254
Query: 368 MMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFL 427
I +E + D T++ ++ G CRAG+VE A +L ++ + + + +++ F
Sbjct: 255 FEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFC 314
Query: 428 KLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
K+G +A + LDT + L + + G +EA +L EM+ R
Sbjct: 315 KVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEA 330
A + +YNTLI CK R+++ + + M+ Q GL N ++N ++ +++A
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMS--QRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
M G+SPDI ++N LL C NG L A + + +++ E+ D TY ++ G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 391 ACRAGKVEGA 400
C+ GKVE A
Sbjct: 445 MCKTGKVEEA 454
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 97/204 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y L+ LC R ++ ++ M + N+ +++ +L++ K+ EA + + M
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ + PDI +++ L+ C + + A++M + + AD +Y+ L+ G C+A +VE
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
+ + R + + + T+ +I F + G +A +F + D ++ +L
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
L G E+A V+ ++MQ R +
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREM 431
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y++LI LC DRI E+ + D+M ++ S+N ++N K++E+ + M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ + ++N L+ + G++ A + +++ + D TY+ L+ G C G++E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL++ ++ ++ T+ +I K G +A + + D ++ +
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
S L G E + + +M+ L+ +D
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+N +I C ++ +L I+ M Y + + ++N R ++ +A ++D M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PDI ++N ++ + C + A K IE + + + TY ALV G C + +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
A +L + K+ T+ ++ AF+K G +A
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/225 (17%), Positives = 94/225 (41%), Gaps = 5/225 (2%)
Query: 253 NNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNIC 312
N+++ + D+ ++ F + +N L++ + KL + + + M ++
Sbjct: 67 NDAIDLFSDMVKS-----RPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
+FN ++N ++ A ++ M +G PD + L+ +C + A ++ ++
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
E D Y+A++ C+ +V A + IE + T+ +++ +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ A + + + + ++ L VK G+ EAK + +EM
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y +I LCK + ++L++ LN ++N ++N L + + EA + D ++
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G+ P ++ L+ C G + A K++ + + L + Y+++V G C+ G+ E
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A+ V+ R +V T +I + K G +A+ + ++ + D F L
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 459 SKLVKLGRFEEAKVVLKEM 477
GR EEA+ +L+EM
Sbjct: 838 KGFCTKGRMEEARGLLREM 856
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 35/255 (13%)
Query: 257 SILDDVTQTLARLDNGFAR-MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFN 315
+++D + Q ++ G R + +Y+ LI L K ++E+L ++ M N+ ++
Sbjct: 257 ALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT 316
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEE 375
I+ L K+EEA+ + + + +VG+ D + L+ C GNL A M+ +E+
Sbjct: 317 AIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 376 ELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLH-------------- 421
+ TY+ ++ G C AG+V A V + + D + +ST L
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVIT--YSTLLDSYIKVQNIDAVLEI 434
Query: 422 ------------------IISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVK 463
++ AFL +G Y +A D DT ++ + K
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCK 494
Query: 464 LGRFEEAKVVLKEMQ 478
G+ EEA + E++
Sbjct: 495 TGQIEEALEMFNELR 509
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 250 ANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL 309
N N + S+L D+ Q + + YNT+I LC R+ E+ D ++ G G
Sbjct: 361 GNLNRAFSMLGDMEQRGIQ-----PSILTYNTVINGLCMAGRVSEA----DEVSKGVVG- 410
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ +++ +L+S + ++ + + D+ N LL A+ G A +
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ + E +L D+ TY ++ G C+ G++E AL + + V A + II A K
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKK 529
Query: 430 GYYAQAVKFVM 440
G A + ++
Sbjct: 530 GMLDTATEVLI 540
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 93/216 (43%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ Y TL++ LC+L ++ E +V + + + ++ ++ + +A
Sbjct: 207 LVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDR 266
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M G++ D+ S++ L+ GN+ A ++ ++ +E + + TY A++ G C+ G
Sbjct: 267 EMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMG 326
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
K+E A ++ RI + ++ +I + G +A + R ++
Sbjct: 327 KLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Query: 456 LLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLRKY 491
+ + L GR EA V K + G + S L Y
Sbjct: 387 TVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSY 422
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 8/223 (3%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH-VI 334
+ N I LCK + ++ + IM + GL + + IL +L + +A+ V+
Sbjct: 586 LGMLNDAILLLCKRGSFEAAIEVYMIMR--RKGLTVTFPSTILKTLVDNLRSLDAYLLVV 643
Query: 335 DMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
+ +T S D+ + ++ C G L+ A + + + ++ TY++L+ G C+
Sbjct: 644 NAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF 454
G + AL + +E+ + T+ +I K G + A K + + + +
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 455 GLLASKLVKLGRFEEA-KVVLKEMQGR----RLVMSDKLRKYC 492
+ KLG+ E+A +VV ++M GR +S ++ YC
Sbjct: 764 NSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 4/213 (1%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEA 330
F + YNTLI CK R+ E + + M+ Q GL N ++ +++ ++ + A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMS--QRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
V M + GV PDI +++ LL C NG + A + + ++ ++ D TY+ ++ G
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
C+AGKVE + + V T+ ++S F + G +A D
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ ++ L ++ G + +++EM+ R V
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 9/280 (3%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y +VN + D ++ LL K + + I + + ++D
Sbjct: 219 PDLVT---YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 263 TQTLARLDNGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+DN R + YN+LI LC R ++ ++ M + N+ +F+ ++++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
K+ EA + D M + PDI +++ L+ +C + L A M + + ++ +
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY--AQAVKF 438
TY+ L+ G C+A +V+ + + R + + T+ +I F + AQ V
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 439 VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
M+ G D ++ +L L G+ E A VV + +Q
Sbjct: 456 QMVSDG--VLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 92/203 (45%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N+L+ C +RI +++ +V M Y + +FN +++ L + EA ++D M
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD+ ++ ++ C G++ A ++K++E+ ++ Y+ ++ C V
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
AL + +++ + T+ +I G ++ A + + R + +F L
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 460 KLVKLGRFEEAKVVLKEMQGRRL 482
VK G+ EA+ + EM R +
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSI 357
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y++LI C DR+ E+ H+ ++M N+ ++N ++ K+++E + M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ + ++ L+ + A + K++ + + D TY L+ G C GKVE
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL+V ++ K+ T+ +I K G + + + ++ +
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S + G EEA + +EM+
Sbjct: 544 SGFCRKGLKEEADALFREMK 563
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+NTLI L + +R E++ +VD M ++ ++ ++N L R ++ A ++ M+
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ P + +N ++ A C N+ A + ++ + + + TY++L+ C G+
Sbjct: 249 QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L + + K++ T +I AF+K G +A K R D ++ L
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 459 SKLVKLGRFEEAKVVLKEM 477
+ R +EAK + + M
Sbjct: 369 NGFCMHDRLDEAKHMFELM 387
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y TLI+ LC+ RI E+ + M + ++ ++N L K ++EA ++ MK
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ G+ P++ +++ L+ C +G + A ++ + + + TY L+ G C+ K++
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAG 444
A+ +L R+ + + +IS F + + +A F+ MI G
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 1/169 (0%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYN-GNLMAASKMMKR 371
++ +L L ++ A+ M+ +G+ P + S N L+ A C N G + A K+
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE 182
Query: 372 IEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGY 431
+ + DS TY L+ G CR G+++ A + + + T+ +I+
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 432 YAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+A++++ + + ++ L L K GR +A + + M R
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 105/210 (50%), Gaps = 10/210 (4%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ +L+ C+ DR+ ++L++ D M Y N+ +N I++ L K+++ A +++ M+
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ PD+ ++N L++ C +G A++M+ + + E+ D T++AL+ + G+V
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 399 GA-----LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTES 453
A M+ R ++ D V +S ++ + + +L + F++ + D +
Sbjct: 274 EAEEFYEEMIRRSLDPDIVT--YSLLIYGLCMYSRLDEAEEMFGFMV---SKGCFPDVVT 328
Query: 454 FGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ +L + K + E + EM R +V
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
N+C+ N +LN ++ A + M +G P I +F LL +C + A M
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
++ + Y+ ++ G C++ +V+ AL +L R+E D + T+ +IS
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
G ++ A + V R+ D +F L VK GR EA+ +EM R L
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 93/196 (47%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ N L+ C+ ++ +L + M + +I +F +LN ++ +A ++ D
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M +G P++ +N ++ C + + A ++ R+E++ +G D TY++L+ G C +G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+ A ++ + +++ T +I A +K G ++A +F R D ++
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 456 LLASKLVKLGRFEEAK 471
LL L R +EA+
Sbjct: 296 LLIYGLCMYSRLDEAE 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN+LI+ LC R ++ +V M + ++ +FN ++++ ++ EA + M
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ PDI +++ L+ C L A +M + + D TY L+ G C++ KVE
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGY--YAQAVKFVMIYAGRDAALDTESFGL 456
+ + + V T+ +I + + G A+ + M++ G + T + +
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT--YNV 401
Query: 457 LASKLVKLGRFEEAKVVLKEMQ 478
L L G+ E+A V+L +MQ
Sbjct: 402 LLHGLCDNGKIEKALVILADMQ 423
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 117/270 (43%), Gaps = 6/270 (2%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K V Y+ +++ + + + LLN+ +D T+ + + S D T+
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 265 TLARLDNG--FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLT 322
++ + + + +N LI K R+ E+ + M +I +++ ++ L
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 323 SRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSR 382
+++EA + M + G PD+ +++ L+ YC + + K+ + + + ++
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362
Query: 383 TYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--M 440
TY L+ G CRAGK+ A + RR+ VH T+ ++ G +A+ + M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 441 IYAGRDAALDTESFGLLASKLVKLGRFEEA 470
G DA D ++ ++ + K G +A
Sbjct: 423 QKNGMDA--DIVTYNIIIRGMCKAGEVADA 450
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N+L+ L KLDR+++++ + D Q + +FN ++ L K E+A ++ +M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL-GADSRTYDALVLGACRAGKVE 398
G PDI ++N L+ +C + L AS+M K ++ + D TY +++ G C+AGK+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLG--YYAQAVKFVMIYAGRDAALDTESFGL 456
A +L + ++ + T ++ + K G A+ ++ MI G D +F
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG--CFPDVVTFTS 352
Query: 457 LASKLVKLGRFEEAKVVLKEMQGRRL 482
L ++G+ + + +EM R +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGM 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 5/256 (1%)
Query: 230 LLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFA---RMSAYNTLIARL 286
L ++ R N T TF + + + + L + +GF + YNTLI
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM-SGFGCEPDIVTYNTLIQGF 251
Query: 287 CKLDRI-KESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPD 345
CK + + K S D+ + ++ ++ +++ KM EA ++D M +G+ P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 346 ITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLR 405
+FN L+ Y G ++ A ++ ++ D T+ +L+ G CR G+V +
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 406 RIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLG 465
+ + T+ +I+A +A + + A +D + + K G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 466 RFEEAKVVLKEMQGRR 481
+ EA V+++EM+ ++
Sbjct: 432 KVNEANVIVEEMEKKK 447
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVD-IMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
Y ++I+ CK +++E+ ++D ++ G Y N+ +FN +++ +M A + M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G PD+ +F L+ YC G + ++ + + + ++ TY L+ C ++
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A +L ++ + + +I F K G +A V + D +F +L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 458 ASKLVKLGRFEEAKVVLKEM 477
GR EA + +M
Sbjct: 459 IIGHCMKGRMFEAVSIFHKM 478
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N+L+ L KLDR+++++ + D Q + +FN ++ L K E+A ++ +M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL-GADSRTYDALVLGACRAGKVE 398
G PDI ++N L+ +C + L AS+M K ++ + D TY +++ G C+AGK+
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLG--YYAQAVKFVMIYAGRDAALDTESFGL 456
A +L + ++ + T ++ + K G A+ ++ MI G D +F
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG--CFPDVVTFTS 352
Query: 457 LASKLVKLGRFEEAKVVLKEMQGRRL 482
L ++G+ + + +EM R +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGM 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 5/256 (1%)
Query: 230 LLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFA---RMSAYNTLIARL 286
L ++ R N T TF + + + + L + +GF + YNTLI
Sbjct: 193 LFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM-SGFGCEPDIVTYNTLIQGF 251
Query: 287 CKLDRI-KESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPD 345
CK + + K S D+ + ++ ++ +++ KM EA ++D M +G+ P
Sbjct: 252 CKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPT 311
Query: 346 ITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLR 405
+FN L+ Y G ++ A ++ ++ D T+ +L+ G CR G+V +
Sbjct: 312 NVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWE 371
Query: 406 RIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLG 465
+ + T+ +I+A +A + + A +D + + K G
Sbjct: 372 EMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAG 431
Query: 466 RFEEAKVVLKEMQGRR 481
+ EA V+++EM+ ++
Sbjct: 432 KVNEANVIVEEMEKKK 447
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVD-IMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
Y ++I+ CK +++E+ ++D ++ G Y N+ +FN +++ +M A + M
Sbjct: 280 YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G PD+ +F L+ YC G + ++ + + + ++ TY L+ C ++
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A +L ++ + + +I F K G +A V + D +F +L
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
Query: 458 ASKLVKLGRFEEAKVVLKEM 477
GR EA + +M
Sbjct: 459 IIGHCMKGRMFEAVSIFHKM 478
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 2/270 (0%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y +VN + D ++ LLNK F I ++ +DD ++
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 271 NGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
R + Y++LI+ LC R ++ ++ M + N+ +FN ++++ K
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
EA + D M + PDI ++N L+ +C + L A +M + + ++ D TY+ L+
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA 448
G C++ +VE + R + + T+ +I G A K
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 449 LDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
D ++ +L L G+ E+A V MQ
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 87/200 (43%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN+L+ C DR+ ++ + + M ++ ++N ++ K++E+ + M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ D ++ L+ ++G+ A K+ K++ + + D TY L+ G C GK+E
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL V ++ ++ + +I K G + + + ++ +
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S L +EA +LK+M+
Sbjct: 548 SGLCSKRLLQEAYALLKKMK 567
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 120/274 (43%), Gaps = 12/274 (4%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIAN-------TNNSLSILDDVT 263
Y+ L+N R ++ LL K + S T + N +++++++D +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 264 QTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTS 323
+ R D + TLI L ++ E++ +VD M N+ ++ ++N L
Sbjct: 183 EMGYRPDT-----ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 324 RKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRT 383
R + A ++++ M+ + D+ FN ++ + C ++ A + K +E + + + T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 384 YDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYA 443
Y +L+ C G+ A +L + + K++ T +I AF+K G + +A K
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 444 GRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
R D ++ L + R ++AK + + M
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 66/129 (51%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ L+ LC +++++L + D M + L+I + ++ + K+++ W + +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GV P++ ++N +++ C L A ++K+++E+ +S TY+ L+ R G
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 399 GALMVLRRI 407
+ ++R +
Sbjct: 593 ASAELIREM 601
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/195 (17%), Positives = 83/195 (42%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ +N LI K + E+ + D M +I ++N ++N ++++A + +
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M + PD+ ++N L+ +C + + +++ + + L D+ TY L+ G G
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+ A V +++ D V T+ ++ G +A++ + LD +
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 456 LLASKLVKLGRFEEA 470
+ + K G+ ++
Sbjct: 510 TMIEGMCKAGKVDDG 524
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+NTL+ LC DRI E+L + M EA + D M
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMV--------------------ETGFLEAVALFDQM 217
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+G++P + +FN L+ C G ++ A+ ++ ++ + L D TY +V G C+ G
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ AL +L ++E+ + + II K G+++ A + A + ++ +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL 482
GR+ +A+ +L++M R +
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREI 362
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 74/128 (57%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N L+ C+ ++++E+L + +++ + L+ ++N I++ + K++EAW + +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
GV PD+ ++N +++ +C + A+ + ++++ D+ TY+ L+ G +AG+++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 400 ALMVLRRI 407
++ ++ +
Sbjct: 626 SIELISEM 633
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+NTLI LC R+ E+ +V+ M +++ ++ I+N + + A +++ M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ + PD+ ++ ++ C +G+ A + + E+ + + TY+ ++ G C G+
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A +LR + + +++ T +ISA +K G +A K R DT ++ +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRLV 483
K RF++AK + M +V
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVV 433
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%), Gaps = 4/203 (1%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+NT+I C+ R+ E + ++ ++ N ++N +++ + A + M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ GV PD + N LL +C N L A ++ + I+ ++ D+ Y+ ++ G C+ KV
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA--LDTESFG 455
+ A + + V T+ +IS F G A + V+ + +D D ++
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGF--CGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 456 LLASKLVKLGRFEEAKVVLKEMQ 478
L +K G +++ ++ EM+
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMR 634
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 5/211 (2%)
Query: 269 LDNGFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
L+ G A + YN +I C R ++ ++ M + ++ +FN ++++ K+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
EA + D M + PD ++N ++ +C + A M + D T++ +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTI 438
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDA 447
+ CRA +V+ + +LR I + A +T+ +I F ++ A
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 448 ALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
DT + +L + + EEA + + +Q
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQ 529
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 121/279 (43%), Gaps = 15/279 (5%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFI-------ANTNNS 255
PD VA ++ L+N E F YL+ K + + T+ + +
Sbjct: 191 PD---VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247
Query: 256 LSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFN 315
+ +LD + D + YN LI LC+ +RI + ++ M N ++N
Sbjct: 248 IELLDHMKSKGVDAD-----VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEE 375
++N ++ K+ A +++ M + G+SP+ +FN L+ + GN A KM +E +
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 362
Query: 376 ELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
L +Y L+ G C+ + + A R++ + V T+ +I K G+ +A
Sbjct: 363 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Query: 436 VKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVL 474
V + + D ++ L + K+GRF+ AK ++
Sbjct: 423 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 461
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 86/177 (48%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ +FN ++N L + E++ +++ M+ G +P I ++N +L YC G AA +++
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
++ + + AD TY+ L+ CR+ ++ ++LR + +H T+ +I+ F
Sbjct: 252 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 311
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
G A + + + + +F L + G F+EA + M+ + L S+
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 26/261 (9%)
Query: 259 LDDVTQTLARLDNGFARMS----------------------AYNTLIARLCKLDRIKESL 296
+D T + L NGF ++ Y+TLI C++ +KE++
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 297 HIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAY 356
I + M + + +FN ++ SL K+ EA + M + G+ P+ SF+ L+ Y
Sbjct: 494 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 553
Query: 357 CYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALH 416
+G + A + + + TY +L+ G C+ G + A L+ + V A
Sbjct: 554 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH--AVPAAV 611
Query: 417 STHLH--IISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVL 474
T ++ +++A K G A+AV R D+ ++ L S L + G+ A +
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671
Query: 475 KEMQGRRLVMSDKLRKYCNSD 495
KE + R V+ +K+ C D
Sbjct: 672 KEAEARGNVLPNKVMYTCFVD 692
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLN--ICSFNPILNSLTSRKKMEEAWHVI 334
S Y+ LI + I++SL I +M G YG N + + N IL S+ + W +
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLM--GLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 335 DMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
M + PD+ +FN L+ C G+ +S +M+++E+ TY+ ++ C+
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 395 GKVEGALMVLRRIEDDKVHA 414
G+ + A+ +L ++ V A
Sbjct: 242 GRFKAAIELLDHMKSKGVDA 261
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 86/235 (36%), Gaps = 36/235 (15%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+N L+ LCK ++ E+ + M N SF+ ++N + + +A+ V D M
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 339 TVGVSP-----------------------------------DITSFNYLLTAYCYNGNLM 363
VG P D +N LLTA C +GNL
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 364 AASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIED-DKVHALHSTHLHI 422
A + + + + DS TY +L+ G CR GK A++ + E V +
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 423 ISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ K G + + F D + + ++G+ E+ +L EM
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y +I LCK + E++ +++ M+ +I +++ ++N + + A ++ +
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
VG+SP+ ++ L+ C G L A ++ + + E D T++ LV C+AGKV
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 399 GALMVLRRIEDDKV-----------------------------------HALHSTHLHII 423
A +R + D + H T+ ++
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 424 SAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
K G+ +A KF+ AA+DT + L + + K G +A + EM R ++
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
++ +++ L ++EA +++ M G+ PDI +++ L+ +C G A +++ RI
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
L + Y L+ CR G ++ A+ + + + H T ++++ K G
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
A+A +F+ +T SF L + G +A V EM
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 2/182 (1%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
+I + N +++ + K+E+ ++ M P++T++N LL Y ++ + +
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ I + D T +LVLG C + +E L +L+ V T +IS
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLR 489
G A V + +LD ++ + S L + RF+E+++VL EM + + S + R
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI--SPESR 895
Query: 490 KY 491
KY
Sbjct: 896 KY 897
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+NTL+ LC DRI E+L + M EA + D M
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMV--------------------ETGFLEAVALFDQM 217
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+G++P + +FN L+ C G ++ A+ ++ ++ + L D TY +V G C+ G
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ AL +L ++E+ + + II K G+++ A + A + ++ +
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL 482
GR+ +A+ +L++M R +
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREI 362
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 74/128 (57%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N L+ C+ ++++E+L + +++ + L+ ++N I++ + K++EAW + +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
GV PD+ ++N +++ +C + A+ + ++++ D+ TY+ L+ G +AG+++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 400 ALMVLRRI 407
++ ++ +
Sbjct: 626 SIELISEM 633
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+NTLI LC R+ E+ +V+ M +++ ++ I+N + + A +++ M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ + PD+ ++ ++ C +G+ A + + E+ + + TY+ ++ G C G+
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A +LR + + +++ T +ISA +K G +A K R DT ++ +
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRLV 483
K RF++AK + M +V
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVV 433
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%), Gaps = 4/203 (1%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+NT+I C+ R+ E + ++ ++ N ++N +++ + A + M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ GV PD + N LL +C N L A ++ + I+ ++ D+ Y+ ++ G C+ KV
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA--LDTESFG 455
+ A + + V T+ +IS F G A + V+ + +D D ++
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGF--CGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 456 LLASKLVKLGRFEEAKVVLKEMQ 478
L +K G +++ ++ EM+
Sbjct: 612 TLIRGCLKAGEIDKSIELISEMR 634
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 91/215 (42%), Gaps = 5/215 (2%)
Query: 269 LDNGFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
L+ G A + YN +I C R ++ ++ M + ++ +FN ++++ K+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
EA + D M + PD ++N ++ +C + A M + D T++ +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDA 447
+ CRA +V+ + +LR I + A +T+ +I F ++ A
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 448 ALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
DT + +L + + EEA + + +Q ++
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 8/222 (3%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI LC+ +I+E+ + M + ++ ++N ++N ++ A+ ++ +M+
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
P++ +FN L+ C G A ++KR+ + L D +Y+ L+ G CR G +
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L + + T II+AF K G A F+ + + +LD + L
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL--------VMSDKLRKYC 492
+ K+G+ +A +L+ + R+ V+ D L K C
Sbjct: 519 DGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 8/211 (3%)
Query: 272 GFARMSAYNT-LIARLCKLDRIKESLHIVDIMA----CGQYGLNICSFNPILNSLTSRKK 326
GF S T L+ C+ ++++L + D+M+ C N S++ +++ L +
Sbjct: 225 GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP---NSVSYSILIHGLCEVGR 281
Query: 327 MEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDA 386
+EEA+ + D M G P ++ L+ A C G + A + + + TY
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 387 LVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRD 446
L+ G CR GK+E A V R++ D++ T+ +I+ + K G A + + + R
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 447 AALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ +F L L ++G+ +A +LK M
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 124/311 (39%), Gaps = 37/311 (11%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K V Y L++ R+ + + K +D + S T+ + N + +
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 265 TLARLDNGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLT 322
L ++ + + +N L+ LC++ + +++H++ M +I S+N +++ L
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 323 SRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSR 382
M A+ ++ M + PD +F ++ A+C G AS + + + + D
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 383 TYDALVLGACRAGKVEGALMVLRRIEDDKV----HALH------------STHLHIISAF 426
T L+ G C+ GK AL +L + ++ H+L+ L ++
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 427 LKLGYYAQAVKFVMIYAGRDAALD-TESFGLLA------------------SKLVKLGRF 467
KLG V + + G + D T SF +L + L + GR
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 468 EEAKVVLKEMQ 478
EEA+ +L MQ
Sbjct: 633 EEAEKLLSAMQ 643
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 111/242 (45%), Gaps = 11/242 (4%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYN---STNTFKFIANTNNSLSIL 259
PD + Y+ L++ RE N + LL+ NC++ TF I N
Sbjct: 439 PD---IVSYNVLIDGLCREGHMNTAYKLLSSM---NCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 260 DDVTQTLA-RLDNGFARMSAYNT-LIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
D + L L G + T LI +CK+ + +++L I++ + + S N I
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
L+ L+ K++E ++ + +G+ P + ++ L+ +G++ + ++++ ++
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
+ Y ++ G C+ G+VE A +L ++D V H T+ ++ ++ G +A++
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 438 FV 439
V
Sbjct: 673 TV 674
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%)
Query: 307 YGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAAS 366
Y ++ FN +L+ T ++A +++ ++ G+SPD+ ++N L+ Y G A
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 367 KMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAF 426
+++K +E+ +L D +Y+ ++ G CR G ++ A+ +L + + + T+ +S +
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 427 LKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEA 470
+G +A+ + A D + +F ++ + G++ EA
Sbjct: 747 TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 279 YNTLIARLCKLDRI-KESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN ++ K+ R ++ L ++D M + + + +L++ + EA +
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K+ G P ++N LL + G A ++K +EE ADS TY+ LV RAG
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL--DTESFG 455
+ A V+ + V T+ +I A+ K G +A+K + Y+ ++A +T ++
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALK--LFYSMKEAGCVPNTCTYN 425
Query: 456 LLASKLVKLGRFEEAKVVLKEMQ 478
+ S L K R E +L +M+
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMK 448
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKME--EAWHV 333
A++ LI+ + +E++ + + M +YGL N+ ++N ++++ + ME +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMK--EYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKF 326
Query: 334 IDMMKTVGVSPDITSFNYLLTAYCYNGNLM-AASKMMKRIEEEELGADSRTYDALVLGAC 392
D M+ GV PD +FN LL A C G L AA + + + D +Y+ L+ C
Sbjct: 327 FDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALD 450
+ G+++ A +L ++ ++ ++ +I F K G + +A+ M Y G ALD
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG--IALD 443
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEM 477
S+ L S K+GR EEA +L+EM
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREM 470
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YNTL+ +CK ++ + I+ M + N+ S++ +++ + +EA ++ M
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ +G++ D S+N LL+ Y G A +++ + + D TY+AL+ G + GK
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ V ++ + V T+ +I + K G Y +A++ + D + L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 458 ASKLVKLGRFEEAKVVLKEM 477
L K G A ++ EM
Sbjct: 556 IDALCKNGLVGSAVSLIDEM 575
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YNTL++ K+ R +E+L I+ MA ++ ++N +L + K +E V M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K V P++ +++ L+ Y G A ++ + + L AD Y AL+ C+ G V
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAF 426
A+ ++ + + + T+ II AF
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y +VN + D ++ LLNK + + + ++ DD ++
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 271 NGFARMSA--YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
N R + Y++LI+ LC +R ++ ++ M + N+ +FN ++++ K+
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
EA + D M + PDI +++ L+ +C + L A M + + ++ + TY+ L+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL--GYYAQAVKFVMIYAGRD 446
G C+A +++ + + R + + T+ +I F + AQ V M+ G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 447 AALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ T + L L K G+ E+A VV + +Q
Sbjct: 468 PNIMT--YNTLLDGLCKNGKLEKAMVVFEYLQ 497
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEA 330
F + YNTLI CK RI E + + M+ Q GL N ++ +++ + + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMS--QRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
V M + GV P+I ++N LL C NG L A + + ++ ++ TY+ ++ G
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Query: 391 ACRAGKVE 398
C+AGKVE
Sbjct: 515 MCKAGKVE 522
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 90/200 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y++LI C DR+ E+ H+ ++M N+ ++N ++N K+++E + M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ + ++ L+ + + A + K++ + + + TY+ L+ G C+ GK+E
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A++V ++ K+ T+ +I K G + + D + +
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
S + G EEA + ++M+
Sbjct: 548 SGFCRKGLKEEADALFRKMR 567
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN LI C+ +I +L ++ M Y +I + + +LN K++ +A ++D M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PD +F L+ + A ++ R+ + + TY +V G C+ G ++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L ++E K+ A + +I + K + A+ + + ++ L
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
S L R+ +A +L +M R++
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKI 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 200 NSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSIL 259
+ FP+ V Y+ L+N + + + L + ++ +T T+ + +
Sbjct: 395 DCFPN---VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 260 DDVTQTLARL--DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
D+ ++ D + YNTL+ LCK ++++++ + + + + I ++N +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+ + K+E+ W + + GV PD+ +N +++ +C G A + +++ E+
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 378 GADSRT 383
DS T
Sbjct: 572 LPDSGT 577
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 292 IKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNY 351
+ +S ++ + G + N+ +L L ++++A VI++M + G+ PD +++ Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 352 LLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDK 411
L+ C GN+ A ++++++E+ +++ TY+ALV G C G + +L + R+
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 412 VHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTESFGLLASKLVKLGRFEE 469
+ T+ ++ A K +AVK + +I G + L S+ +L + K GR ++
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNL--VSYNVLLTGFCKEGRTDD 264
Query: 470 AKVVLKEMQGR 480
A + +E+ +
Sbjct: 265 AMALFRELPAK 275
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 94/201 (46%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
SAY L+ +LCK + ++ +V+ M Y N ++N ++ L + ++ ++
Sbjct: 142 SAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVER 201
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
+ G++P+ ++++LL A A K++ I + + +Y+ L+ G C+ G+
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
+ A+ + R + A ++ ++ G + +A + G D A ++ +
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 457 LASKLVKLGRFEEAKVVLKEM 477
L + L GR E+A VLKEM
Sbjct: 322 LINSLAFHGRTEQALQVLKEM 342
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 109/243 (44%), Gaps = 8/243 (3%)
Query: 244 NTFKFIANTNNSLSILDDVTQTLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDI 301
N+ F T +L +L ++++ N R++A YN +IARLCK ++ + +D
Sbjct: 324 NSLAFHGRTEQALQVLKEMSK-----GNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDE 378
Query: 302 MACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGN 361
M + N ++N I + K++EA+++I + + ++T+ C GN
Sbjct: 379 MIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGN 438
Query: 362 LMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIED-DKVHALHSTHL 420
AA +++ + D+ TY AL+ G C G GA+ VL +E+ +
Sbjct: 439 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 498
Query: 421 HIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+I K+ A++ + + + ++ +L + E AK VL E++ R
Sbjct: 499 AMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLR 558
Query: 481 RLV 483
+++
Sbjct: 559 KVI 561
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 94/198 (47%)
Query: 282 LIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVG 341
L+ LCK +R+K+++ ++++M + ++ ++N L R + A +++ M+ G
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 342 VSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGAL 401
+ ++N L+ C G+L + + ++R+ ++ L ++ TY L+ A + + A+
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 402 MVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKL 461
+L I ++ +++ F K G A+ + + S+ +L L
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 462 VKLGRFEEAKVVLKEMQG 479
GR+EEA +L EM G
Sbjct: 292 CCDGRWEEANSLLAEMDG 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 270 DNGFARMSA-YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
D+G+ + YN L+ LC L + +SL V+ + N +++ +L + + +
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
EA ++D + G P++ S+N LLT +C G A + + + + A+ +Y+ L+
Sbjct: 229 EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILL 288
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRD 446
C G+ E A +L ++ T+ +I++ G QA++ + M
Sbjct: 289 RCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQ 348
Query: 447 AALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
+ S+ + ++L K G+ + L EM RR
Sbjct: 349 FRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI+ LC++ R +++ +V+ + G + L++ ++N ++ + E+ + ++ M+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PD ++N L++ + + + + +MM+++ E+ L TY A++ C G+++
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 399 GALMVLRRIE-DDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
AL + + + KV+ + +I+AF KLG + QA+
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
Y TLI C + ++++++ + M + + +++ L ++ +A V++ +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K G S D+ ++N L+ +C N +M+ +E+E DS TY+ L+ +
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL------DT 451
E ++ ++ +D + +T+ +I A+ +G +A+K +D L +T
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF-----KDMGLHSKVNPNT 652
Query: 452 ESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ +L + KLG F +A + +EM+
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMK 679
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 282 LIARLCKLDRIKESLHIVDIMACGQYG------LNICSFNPILNSLTSRKKMEEAWHVID 335
LI LCK R+ E+L + + M + + FN +++ L +++EA ++
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 336 MMKTVG-VSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
MK P+ ++N L+ YC G L A +++ R++E+E+ + T + +V G CR
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTE 452
+ A++ +E + V T++ +I A + +A+ + M+ AG + D +
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG--CSPDAK 512
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ L S L ++ R +A V+++++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLK 538
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 9/277 (3%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLA--- 267
++ L++ GR D + ++ L+ K T + NT +D+ +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 268 --RLDNGF---ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL-NICSFNPILNSL 321
R D+G A +NTLI LCK+ R+KE+ ++ M + + N ++N +++
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 322 TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADS 381
K+E A V+ MK + P++ + N ++ C + L A +E+E + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 382 RTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMI 441
TY L+ C VE A+ ++ + + +IS ++ A++ V
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 442 YAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+LD ++ +L E+ +L +M+
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI+ LC++ R +++ +V+ + G + L++ ++N ++ + E+ + ++ M+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PD ++N L++ + + + + +MM+++ E+ L TY A++ C G+++
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 399 GALMVLRRIE-DDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
AL + + + KV+ + +I+AF KLG + QA+
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 282 LIARLCKLDRIKESLHIVDIMACGQYG------LNICSFNPILNSLTSRKKMEEAWHVID 335
LI LCK R+ E+L + + M + + FN +++ L +++EA ++
Sbjct: 335 LINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 336 MMKTVG-VSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
MK +P+ ++N L+ YC G L A +++ R++E+E+ + T + +V G CR
Sbjct: 395 RMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTE 452
+ A++ +E + V T++ +I A + +A+ + M+ AG + D +
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG--CSPDAK 512
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ L S L ++ R +A V+++++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLK 538
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y TLI C + ++++++ + M + + +++ L ++ +A V++ +K
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G S D+ ++N L+ +C N +M+ +E+E DS TY+ L+ + E
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL------DTE 452
++ ++ +D + +T+ +I A+ +G +A+K +D L +T
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF-----KDMGLHSKVNPNTV 653
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ +L + KLG F +A + +EM+
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMK 679
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 114/277 (41%), Gaps = 9/277 (3%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLA--- 267
++ L++ GR D + ++ L+ K T + NT +D+ +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 268 --RLDNGF---ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQ-YGLNICSFNPILNSL 321
R D+G A +NTLI LCK+ R+KE+ ++ M + N ++N +++
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 322 TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADS 381
K+E A V+ MK + P++ + N ++ C + L A +E+E + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 382 RTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMI 441
TY L+ C VE A+ ++ + + +IS ++ A++ V
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 442 YAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+LD ++ +L E+ +L +M+
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 87/161 (54%), Gaps = 1/161 (0%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI+ LC++ R +++ +V+ + G + L++ ++N ++ + E+ + ++ M+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PD ++N L++ + + + + +MM+++ E+ L TY A++ C G+++
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 399 GALMVLRRIE-DDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
AL + + + KV+ + +I+AF KLG + QA+
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
Y TLI C + ++++++ + M + + +++ L ++ +A V++ +
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL 537
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K G S D+ ++N L+ +C N +M+ +E+E DS TY+ L+ +
Sbjct: 538 KEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF 597
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL------DT 451
E ++ ++ +D + +T+ +I A+ +G +A+K +D L +T
Sbjct: 598 ESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF-----KDMGLHSKVNPNT 652
Query: 452 ESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ +L + KLG F +A + +EM+
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMK 679
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 282 LIARLCKLDRIKESLHIVDIMACGQYG------LNICSFNPILNSLTSRKKMEEAWHVID 335
LI LCK R+ E+L + + M + + FN +++ L +++EA ++
Sbjct: 335 LINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLV 394
Query: 336 MMKTVG-VSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
MK P+ ++N L+ YC G L A +++ R++E+E+ + T + +V G CR
Sbjct: 395 RMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRH 454
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTE 452
+ A++ +E + V T++ +I A + +A+ + M+ AG + D +
Sbjct: 455 HGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG--CSPDAK 512
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ L S L ++ R +A V+++++
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLK 538
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 9/277 (3%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLA--- 267
++ L++ GR D + ++ L+ K T + NT +D+ +
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 268 --RLDNGF---ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL-NICSFNPILNSL 321
R D+G A +NTLI LCK+ R+KE+ ++ M + + N ++N +++
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 322 TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADS 381
K+E A V+ MK + P++ + N ++ C + L A +E+E + +
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 382 RTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMI 441
TY L+ C VE A+ ++ + + +IS ++ A++ V
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 442 YAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+LD ++ +L E+ +L +M+
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 259 LDDVTQTLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDIMA-CGQYGLNICSFN 315
+D QT+ + R + + +I K ++ SL + D+M CG + +FN
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP-TVHTFN 628
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEE 375
++N L +++ME+A ++D M GVS + ++ ++ Y G+ A + R++ E
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 376 ELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
L D TY+AL+ C++G+++ AL V + + + + +I + + G +A
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 436 VKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ D ++ S K G A ++EM+
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 97/239 (40%), Gaps = 35/239 (14%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI K+ +I ++L + +M N+ +++ ++N K A+ V + M
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG--- 395
G+ PD+ +N +++A+C GN+ A + +K +++ +RT+ ++ G ++G
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 396 --------------------------------KVEGALMVLRRIEDDKVHALHSTHLHII 423
++E A+ +L + V A T+ I+
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 424 SAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ +G +A ++ +D ++ L K GR + A V KEM R +
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 115/272 (42%), Gaps = 44/272 (16%)
Query: 244 NTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMA 303
N F N +++ + D++T+ + + ++NTLI CK+ + E + M
Sbjct: 248 NKFCKEGNISDAQKVFDEITKRSLQ-----PTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 304 CGQYGLNICSFNPILNSLTSRKKMEEAWHV----------------------------ID 335
+ ++ +++ ++N+L KM+ A + ID
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 336 MMK-------TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
+MK + G+ PDI +N L+ +C NG+L+AA ++ + L D TY L+
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRD 446
G CR G VE AL + + ++ + + ++ K G A + + M+ AG
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG-- 480
Query: 447 AALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
D ++ ++ K G + +LKEMQ
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 299 VDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCY 358
++I+ G + LN+ FN ++N + +A V D + + P + SFN L+ YC
Sbjct: 229 MEILDAG-FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 359 NGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGA 400
GNL ++ ++E+ D TY AL+ C+ K++GA
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 61/126 (48%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y TLI C+ ++ +L I M L+ F+ ++ + ++ +A + M
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ PD ++ ++ A+C G+ K++K ++ + TY+ L+ G C+ G+++
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 399 GALMVL 404
A M+L
Sbjct: 538 NADMLL 543
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 18/299 (6%)
Query: 193 ATQSPNTNSFPDK--RTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIA 250
A+ T+ F K V + DL E ++ H R + Y S ++ +
Sbjct: 33 ASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALSLFHQYQEMGFRHD-YPSYSSLIYKL 91
Query: 251 NTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLN 310
+ + +D + + L R N R S + LI K + +++ + +
Sbjct: 92 AKSRNFDAVDQILR-LVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRT 150
Query: 311 ICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMK 370
I S N ++N L ++E+A D K + + P+ SFN L+ + + AA K+
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 371 RIEEEELGADSRTYDALVLGACR---AGKVEGAL--MVLRRIEDDKVHALHSTHLHIISA 425
+ E E+ TY++L+ CR GK + L M+ +RI + V T ++
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV-----TFGLLMKG 265
Query: 426 FLKLGYYAQAVK--FVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
G Y +A K F M Y G L ++G+L S L K GR +EAK++L EM+ RR+
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGL--VNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 88/204 (43%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN+LI LC+ D + ++ +++ M + N +F ++ L + + EA ++ M+
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G P + ++ L++ G + A ++ +++ + D Y+ LV C +V
Sbjct: 284 YRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVP 343
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A VL ++ +T+ +I F ++ + + + +F +
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMV 403
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
+ L+K G + A VL+ M + L
Sbjct: 404 AGLIKGGNLDHACFVLEVMGKKNL 427
>AT3G49240.1 | Symbols: emb1796 | emb1796 (embryo defective 1796);
ATP binding | chr3:18256086-18257975 FORWARD
Length = 629
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 9/236 (3%)
Query: 270 DNGFARMSA--YNTLIARLCKLDRIKESLHIVDIM-----ACGQYGLNICSFNPILNSLT 322
+N RMSA YN ++ L + + E+L + D + +N+ +FN ++N
Sbjct: 302 ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYC 361
Query: 323 SRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSR 382
+ K EEA V M SPD SFN L+ C N L A K+ +EE+ + D
Sbjct: 362 AGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEY 421
Query: 383 TYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIY 442
TY L+ + GK++ + + + + + + + +K G A F +
Sbjct: 422 TYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMM 481
Query: 443 AGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV-MSDKLRKYCNSDVK 497
+ +D E++ + L + GR +E ++ EM V +S++L+++ +++
Sbjct: 482 VSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELR 536
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
++ LI +C ++E++++V + + + +N I+ + K EA V M
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K GV PD ++N L+ G + A +K + + D+ TY +L+ G CR G+
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES 351
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
GAL +L +E T+ ++ K + ++ + L++ + L
Sbjct: 352 LGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATL 411
Query: 458 ASKLVKLGRFEEA 470
LVK G+ EA
Sbjct: 412 VRSLVKSGKVAEA 424
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACG-QYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN L+ LCK + VD M ++ SF +++++ + K + EA +++ +
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G PD +N ++ +C A + K+++EE + D TY+ L+ G +AG+V
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
E A M L+ + D +T+ +++ + G A+ + R A + ++ L
Sbjct: 317 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTL 376
Query: 458 ASKLVKLGRFEEAKVVLKEM 477
L K R + + L EM
Sbjct: 377 LHGLCK-ARLMDKGMELYEM 395
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YNT++ C L + E++ + M + ++N ++ L+ ++EEA + M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PD ++ L+ C G + A +++ +E + TY+ L+ G C+A ++
Sbjct: 328 DAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMD 387
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL-DTESFGLL 457
+ + ++ V + + ++ + +K G A+A + V YA +L D ++ L
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE-VFDYAVDSKSLSDASAYSTL 446
Query: 458 ASKLVKLGRFEEAKVV 473
+ L L + +E +V
Sbjct: 447 ETTLKWLKKAKEQGLV 462
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 2/235 (0%)
Query: 238 NCYNSTNTFKFIANTNNSLSILDDVTQTLARL-DNGF-ARMSAYNTLIARLCKLDRIKES 295
NC ++ + F + T L + + L GF + A N LI L ++ ++ +
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 296 LHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTA 355
+ ++ G+N+ + N ++N+L KME+ + ++ GV PDI ++N L++A
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 356 YCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHAL 415
Y G + A ++M + + TY+ ++ G C+ GK E A V + +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 416 HSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEA 470
+T+ ++ K G + K RD D F + S + G ++A
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 93/210 (44%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
+ + YNTLI+ ++E+ +++ M + + ++N ++N L K E A
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
V M G+SPD T++ LL C G+++ K+ + ++ D + +++
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTE 452
R+G ++ ALM +++ + + + +I + + G + A+ + A+D
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
++ + L K EA + EM R L
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 102/242 (42%), Gaps = 7/242 (2%)
Query: 249 IANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYG 308
+ N N++ + + + RLD + YNTL+ K+ I + I M +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLD-----VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
S++ ++N+L S+ + EA+ V D M + + P + N ++ YC +GN
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHS--THLHIISAF 426
++++ E D +Y+ L+ G R + A +++++E+++ + T+ I+ F
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGF 667
Query: 427 LKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
+ +A + R D ++ + + V EA + EM R D
Sbjct: 668 CRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Query: 487 KL 488
K
Sbjct: 728 KF 729
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 79/159 (49%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI C+ I ++++ + M +++ ++N IL+ L RK + EA + + M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ PD + L+ +C GNL A ++ ++++E+ + D TY+ L+ G + G ++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
A + + ++ ++ +++A G+ A+A +
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 100/230 (43%)
Query: 254 NSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICS 313
+ +S L+ V + N + S ++ LI + +++E+ ++ + ++I +
Sbjct: 143 SGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDA 202
Query: 314 FNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIE 373
N ++ SL +E AW V + GV ++ + N ++ A C +G + + +++
Sbjct: 203 CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262
Query: 374 EEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYA 433
E+ + D TY+ L+ G +E A ++ + T+ +I+ K G Y
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 434 QAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+A + + D+ ++ L + K G E + V +M+ R +V
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/207 (18%), Positives = 85/207 (41%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
+ Y +L+ CK + E+ + M ++ F+ +++ T +++A +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
+K G+ PD + L+ YC G + A + + ++ D TY+ ++ G C+
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
+ A + + + + T +I KLG A++ + LD ++
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 457 LASKLVKLGRFEEAKVVLKEMQGRRLV 483
L K+G + AK + +M + ++
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEIL 547
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 94/205 (45%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN L+ LC++ R ++ ++ M + N+ +F ++++ K+ EA + ++M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ V PD+ ++ L+ C G L A +M +E + Y L+ G C++ +V
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
E + + + V A T+ +I + +G A + + R A D ++ +L
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL 482
L G+ E+A ++ + M+ R +
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREM 429
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 269 LDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
L GF + Y TLI LCK + ++ + + M N+ ++N ++ L +
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 328 -EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDA 386
+ AW + DMMK + P++ +F L+ A+ G LM A ++ + + + D TY +
Sbjct: 240 GDAAWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 387 LVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRD 446
L+ G C G ++ A + +E + + + +I F K +K + +
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 447 AALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
+T ++ +L +GR + A+ V +M RR
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 6/204 (2%)
Query: 278 AYNTLIARLCK---LDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVI 334
Y +LI LC LD ++ ++++ C N + +++ K++E+ +
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYP---NEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 335 DMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
M GV + ++ L+ YC G A ++ ++ D RTY+ L+ G C
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF 454
GKVE ALM+ + ++ T+ II KLG A + + ++
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471
Query: 455 GLLASKLVKLGRFEEAKVVLKEMQ 478
+ S + G EA + K+M+
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMK 495
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ +F +LN ++E+A + D + +G P++ ++ L+ C N +L A ++
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
++ + TY+ALV G C G+ A +LR + ++ T +I AF+K+
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
G +A + + D ++G L + L G +EA+ + M+
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
+ Y+ + L + R E+ I M Y + +++ ++ L K++EEA V+D
Sbjct: 371 AVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M+ G PDI ++ L+ +C N L A + E+ DS D L+ G K
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNK 490
Query: 397 VEGA-LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF- 454
EGA + ++ +++ V ST+ +I LK+ +A+ + + ++ E+F
Sbjct: 491 FEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFD 550
Query: 455 GLLASKLVKLGRFEEAKVVL 474
G LA K G E+AK L
Sbjct: 551 GYLA----KFGTLEDAKKFL 566
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 12/218 (5%)
Query: 196 SPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNS 255
SPN S+ V L N+ E F+ L +L + N Y ++ K +
Sbjct: 278 SPNVISYSTLINV-----LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
Query: 256 LSILDDVTQTLARLDNGFA---RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNIC 312
LD Q + GF + AYNTL+ C I +++ + M NI
Sbjct: 333 FDALDLWNQMI----RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
++ ++N R ++ A ++ + M T G P++ + ++ A C + A +++ +
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDD 410
+E T++A + G C AG+++ A V R++E
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
Y ++ LC+ + KE+ +++IM+ ++ +FN + L +++ A V M
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 338 KTVG-VSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
+ P+I ++N LL + A + + I + S TY+ L+ G+C AG
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV-MIYAGR 445
AL ++ ++ D T II A+ K G +A + + ++ GR
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGR 593
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 98/204 (48%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YNT+I C+ ++++L + + M ++ ++ ++++ KM+EA + M
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K +G+ D+ + L+ +C G L + + E + TY+ L+ G C+ G++
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A + + + V T+ +I +G +A++ + + +D + ++ ++
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRR 481
+KL K G +A +++ M+ RR
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRR 382
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMA--CGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
YN L+ LC + E+ ++ +M ++ S+N +++ L ++ +A + D+
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 337 M-KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
+ + +G +T+ N LL + G++ A ++ K+I + ++ +S TY A++ G C+ G
Sbjct: 450 LVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+ A +L ++ ++ + ++S+ K G QA + + D SF
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 456 LLASKLVKLGRFEEAKVVLKEM 477
++ +K G + A+ +L M
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGM 590
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 118/276 (42%), Gaps = 2/276 (0%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
+ TV Y+ +++ +E D L + T T+ + + + LDD
Sbjct: 127 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 186
Query: 265 TLARLDNGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLT 322
+ + + YN LI CK ++ L M N+ S++ ++++
Sbjct: 187 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 246
Query: 323 SRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSR 382
M++A M+ VG+ P+ ++ L+ A C GNL A ++ + + + +
Sbjct: 247 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 306
Query: 383 TYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIY 442
TY AL+ G C A +++ A + +++ V +++ +I F+K +A++ +
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366
Query: 443 AGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
GR D +G L L + E AKVV+ EM+
Sbjct: 367 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMK 402
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDM 336
Y +LI CK+ + ++ + + M Q G+ N+ ++ +++ L ++M+EA +
Sbjct: 273 YTSLIDANCKIGNLSDAFRLGNEML--QVGVEWNVVTYTALIDGLCDAERMKEAEELFGK 330
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M T GV P++ S+N L+ + N+ A +++ ++ + D Y + G C K
Sbjct: 331 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 390
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
+E A +V+ +++ + A + ++ A+ K G + + + D + +F +
Sbjct: 391 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 450
Query: 457 LASKLVK 463
L L K
Sbjct: 451 LIDGLCK 457
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI LC +R+KE+ + M N+ S+N +++ K M+ A +++ +K
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 367
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G+ PD+ + + C + AA +M ++E + A+S Y L+ ++G
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 427
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTES--FGL 456
L +L +++ + T +I K ++AV + + D L + F
Sbjct: 428 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS-NDFGLQANAAIFTA 486
Query: 457 LASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ L K + E A + ++M + LV
Sbjct: 487 MIDGLCKDNQVEAATTLFEQMVQKGLV 513
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 246 FKFIANTNNSLSILDDVTQTLARLDNGFARMSA--YNTLIARLCKLDRIKESLHIVDIMA 303
+F+ N L++ + ++ R NG ++ +N+LI +ES+ + M
Sbjct: 107 LEFLGRARN-LNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMK 165
Query: 304 CGQYGLNICSFNPILNSLTSRKKMEEAWHVID-MMKTVGVSPDITSFNYLLTAYCYNGNL 362
++ +FN +L+ L R + A + D M +T GV+PD +FN L+ +C N +
Sbjct: 166 QMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMV 225
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
A ++ K +E D TY+ ++ G CRAGKV+ A VL
Sbjct: 226 DEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y TL+ LCK+ + L ++D M C ++ + + + ++ L R K+EEA +++ +
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV 359
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GVSP++ +N L+ + C A + R+ + L + TY L+ CR GK++
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL L + D + + +I+ K G + A F+ + ++ L
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMS 485
G+ +A + EM G+ + S
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPS 506
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 94/201 (46%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
+A ++L+ L K +I+E+L++V + N+ +N +++SL +K EA + D
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M +G+ P+ +++ L+ +C G L A + + + L Y++L+ G C+ G
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
+ A + + + K+ T+ ++ + G +A++ G+ A +F
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTT 512
Query: 457 LASKLVKLGRFEEAKVVLKEM 477
L S L + G +A + EM
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEM 533
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVID 335
YN LI LCK + E+ + D M G+ GL N +++ +++ R K++ A +
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRM--GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M G+ + +N L+ +C G++ AA M + ++L TY +L+ G C G
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
K+ AL + + + T ++S + G AVK A + + ++
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 456 LLASKLVKLGRFEEAKVVLKEMQGRRLV 483
++ + G +A LKEM + +V
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 112/272 (41%), Gaps = 2/272 (0%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y+ L+++ + R F+ L ++ + + T+ + + LD L +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 271 NGFARMSAY--NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
+ ++S Y N+LI CK I + + M + + ++ ++ S+ K+
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
+A + M G++P I +F LL+ G + A K+ + E + + TY+ ++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA 448
G C G + A L+ + + + ++ +I G ++A FV +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 449 LDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
L+ + L + G+ EEA V +EM R
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y +L+ C +I ++L + M +I +F +L+ L + +A + + M
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
V P+ ++N ++ YC G++ A + +K + E+ + D+ +Y L+ G C G+
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A + + + + ++ F + G +A+ R LD +G+L
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
+K + +LKEM R L D
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 27/246 (10%)
Query: 236 RDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKES 295
RD CY + + F +AN F + N L+ L + + ++
Sbjct: 204 RDGCYLALDVFPVLANKGM------------------FPSKTTCNILLTSLVRANEFQKC 245
Query: 296 LHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLL-- 353
D++ C ++ F +N+ K+EEA + M+ GV+P++ +FN ++
Sbjct: 246 CEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDG 304
Query: 354 TAYC--YNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDK 411
C Y+ M KM++R E L TY LV G RA ++ A VL+ +
Sbjct: 305 LGMCGRYDEAFMFKEKMVERGMEPTL----ITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Query: 412 VHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAK 471
+ ++I +F++ G +A++ + + +L + ++ L K G+ + A+
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 472 VVLKEM 477
+LKEM
Sbjct: 421 RLLKEM 426
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ L+ L + RI ++ ++ M + N+ +N +++S + +A + D+M
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ G+S +++N L+ YC NG A +++K + + ++ +++ C +
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 399 GAL-----MVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTES 453
AL M+LR + L +T +IS K G +++A++ + + +DT +
Sbjct: 453 SALRFVGEMLLRNMSPGG--GLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 454 FGLLASKLVKLGRFEEAKVVLKEMQGRRLVM 484
L L + G+ +EA + KE+ GR VM
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 113/235 (48%), Gaps = 13/235 (5%)
Query: 253 NNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--N 310
+ + LD++ + + DN Y+ LI L +++++E++ D C + G+ +
Sbjct: 557 DEAFMFLDEMVKRGLKPDN-----YTYSILICGLFNMNKVEEAIQFWD--DCKRNGMLPD 609
Query: 311 ICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMK 370
+ +++ +++ ++ EE D M + V P+ +N+L+ AYC +G L A ++ +
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 371 RIEEEELGADSRTYDALVLGACRAGKVEGALMVLR--RIEDDKVHALHSTHLHIISAFLK 428
++ + + +S TY +L+ G +VE A ++ R+E + + H T L I + K
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL--IDGYGK 727
Query: 429 LGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
LG + + ++ + ++ ++ + G EA +L EM+ + +V
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
S YNTLI CK + + ++ M + +N SF ++ L S + A +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M +SP L++ C +G A ++ + + D+RT +AL+ G C AGK
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
++ A + + I ++ +IS +A F+ R D ++ +
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 457 LASKLVKLGRFEEA 470
L L + + EEA
Sbjct: 581 LICGLFNMNKVEEA 594
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 72/160 (45%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN LI C+ R+ +L + + M N ++ ++ ++ ++EEA + + M
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G+ P++ + L+ Y G ++ +++ + + + + TY ++ G R G V
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
A +L + + + T+ I +LK G +A K
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 94/200 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ +L+ C++ ++ E+ +++ M + +I + +L+ + KM +A+ ++ M+
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G P+ + L+ A C + A K+ +E E AD TY ALV G C+ GK++
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKID 374
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
+VL + + T++HI+ A K + + ++ + + D + ++
Sbjct: 375 KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVI 434
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
KLG +EA + EM+
Sbjct: 435 RLACKLGEVKEAVRLWNEME 454
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 11/183 (6%)
Query: 314 FNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIE 373
F ++ S +++A V+D M G PD F LL A C +G++ A+K+ + +
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM- 244
Query: 374 EEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYA 433
+ R + +L+ G CR GK+ A VL ++ + + +++S + G A
Sbjct: 245 RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 434 QAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLRKYCN 493
A + R + + +L L K+ R EEA V EM+ R C
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME----------RYECE 354
Query: 494 SDV 496
+DV
Sbjct: 355 ADV 357
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
+ Y LI LCK+DR++E++ + M + ++ ++ +++ K+++ + V+D
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M G+ P ++ +++ A+ + ++M+++ + E D Y+ ++ AC+ G+
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTESF 454
V+ A+ + +E++ + T + +I+ G +A M+ G + +
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTL 502
Query: 455 GLLASKLVKLGRFEEAKVV 473
LL + ++K + E AK V
Sbjct: 503 KLLLNTVLKDKKLEMAKDV 521
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 117/308 (37%), Gaps = 43/308 (13%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y + AA + D L N+ D Y S + + + ++D Q D
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF---D 238
Query: 271 NGFAR-----MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRK 325
AR + YNTLI CK ++S + + M ++ +FN +L L
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 326 KMEEAWHVIDMMKTVGVSPDITSFNYLLTAY----------------------------- 356
+E+A +V+ MK +G PD +F+ L Y
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 357 ------CYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDD 410
C G + A +++ R + L + Y+ ++ G CR G + GA M + +E
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ 418
Query: 411 KVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEA 470
+ H + +I F +LG A K V + + E++ +L + F++
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 471 KVVLKEMQ 478
+LKEM+
Sbjct: 479 FDILKEME 486
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 88/201 (43%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
AYN LI R C+L ++ + V+ M ++ ++N ++ + + ++ + ++ M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G P++ S+ L+ C L+ A + + +E+ + R Y+ L+ G C GK+
Sbjct: 486 EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
E A + + + T+ +I G ++A ++ + + D ++ L
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 458 ASKLVKLGRFEEAKVVLKEMQ 478
S G + + +EM+
Sbjct: 606 ISGYGFAGNVQRCIALYEEMK 626
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y I KL + + L + + M + ++ +N +++ L K+M +A + D M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ P + ++N L+ YC GN + K+ +R++ + + T++ L+ G +AG VE
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAG------RDAAL--- 449
A VL+ ++D LG+ A F +++ G +AAL
Sbjct: 302 DAENVLKEMKD-------------------LGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 450 ----------DTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ + +L + L K G+ E+A+ +L + LV
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 121/279 (43%), Gaps = 8/279 (2%)
Query: 207 TVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTL 266
+V Y+ L+ GR+ +F+ +L + + + ++ + N S L + Q +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE-AQIV 516
Query: 267 AR--LDNGFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTS 323
R D G + ++ YN LI C +I+++ M LN+ ++N +++ L+
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 324 RKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRT 383
K+ EA ++ + G+ PD+ ++N L++ Y + GN+ + + ++ + +T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 384 YDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYA 443
Y L++ C EG + R + + + ++ + G +A
Sbjct: 637 YH-LLISLCTK---EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 444 GRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ LD ++ L +K+G+ E + ++ EM R +
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREM 731
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 85/204 (41%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YNT+I C+ + + ++ M + ++N ++ +ME A ++ MK
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GVSP + ++N L+ Y ++K +E+ + +Y L+ C+ K+
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +V R +ED V + +I G A +F + L+ ++ L
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRL 482
L G+ EA+ +L E+ + L
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGL 595
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
++ ++N L K+++A + M+ G++PD+ S+ L+ + GN+ AS + +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
EE L + Y+ L+ G CR+G++E A +L + +H T+ II + K G
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 433 AQAVKF 438
A+A +
Sbjct: 714 AEAFRL 719
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+Y LI KL ++++ I D M N+ +N +L ++E+A ++D M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G+ P+ ++ ++ YC +G+L A ++ ++ + L DS Y LV G CR V
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748
Query: 398 EGALMVL 404
E A+ +
Sbjct: 749 ERAITIF 755
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 62/123 (50%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y L+ L K D++ ++ I M ++ S+ ++N + M++A + D M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G++P++ +N LL +C +G + A +++ + + L ++ TY ++ G C++G +
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 399 GAL 401
A
Sbjct: 715 EAF 717
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 8/262 (3%)
Query: 224 FNMLHYLLNKRARDNCYNSTNTFK-FIANTNNSLSILDDVTQTLARL-DNGFAR-MSAYN 280
+N++ ++ R N T K F+ N+ D + L + + G A + YN
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSR-----FGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 281 TLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTV 340
+LI L K R+ E+ + M N ++ ++ + A + M+
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 341 GVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGA 400
GV P+ L+ YC G ++ A + + ++ + D++TY L+ G + KV+ A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 401 LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASK 460
+ R + + ++ +I+ F KLG +A + + +L
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 461 LVKLGRFEEAKVVLKEMQGRRL 482
+ G E+AK +L EM + L
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGL 693
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 6/223 (2%)
Query: 259 LDDVTQTLARLDNGFARMS--AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSF-- 314
L+D L +D+ + Y+ LI L K + +V M +G+NI +
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV--SHGINIKPYMY 350
Query: 315 NPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEE 374
+ + ++ ME+A + D M G+ P ++ L+ YC N+ +++ +++
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 375 EELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQ 434
+ TY +V G C +G ++GA +++ + + +I FL+ +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 435 AVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
A++ + + A D + L L K R +EA+ L EM
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN+LI LC + E+ +++++ + N ++N ++N K++++ ++ +M
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GV D ++N L YC G AA K++ R+ + D T++ L+ G C GK+
Sbjct: 352 RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG 411
Query: 399 GALMVLRRIEDDK 411
AL+ L ++ K
Sbjct: 412 KALVRLEDLQKSK 424
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 17/260 (6%)
Query: 154 ELAHSSTPNLKIESLPFLRKLHHISPNCRPILSITTRFFATQSPNTNS-----------F 202
L N ++ L ++K+ I P+ S+ TR F + + ++
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMG-IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGIS 251
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD V + L++ G+E N+ + + + T+ + N +LD+
Sbjct: 252 PD---VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 263 TQTLARL--DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+ L L F YNTLI CK R+ + + I+ +M+ + ++N +
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
K A V+ M + GV PD+ +FN LL C +G + A ++ +++ +
Sbjct: 369 YCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 381 SRTYDALVLGACRAGKVEGA 400
TY+ ++ G C+A KVE A
Sbjct: 429 IITYNIIIKGLCKADKVEDA 448
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ +L+ C ++R E++ +VD + Y N+ +N I++SL + ++ A V+ MK
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 339 TVGVSPDITSFNYLLT-----------------------------------AYCYNGNLM 363
+G+ PD+ ++N L+T Y G L+
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 364 AASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHII 423
A K + + + + TY++L+ G C G ++ A VL + T+ +I
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 424 SAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ + K +K + + + DT ++ L + G+F A+ VL M
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 105/236 (44%), Gaps = 5/236 (2%)
Query: 250 ANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL 309
N +L +L + + R D + YN+LI RL S I+ M
Sbjct: 198 GQVNTALDVLKHMKKMGIRPD-----VVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ +F+ +++ ++ EA + M V+P+I ++N L+ C +G L A K++
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+ + ++ TY+ L+ G C+A +V+ + +L + D V T+ + + +
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMS 485
G ++ A K + D +F +L L G+ +A V L+++Q + V+
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
Query: 274 ARMSAYNTLIARLCKLDRIKESLHIV-DIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
A +N +I+ L K + ++L + D+M+ + C++ P+++ L+ ++ EA
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ + M G P+ +N L+ + G AA + KR+ +E + D +TY LV C
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA-VKFVMIYAGRDAALDT 451
G+V+ L + +++ ++ + II+ K +A V F + R D
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 452 ESFGLLASKLVKLGRFEEAKVVLKEMQ 478
++ L L G EEA + E+Q
Sbjct: 1033 YTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 230 LLNKRARDNC--YNS-TNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARL 286
+L+ R NC YN N F + + ++ + + R D + Y+ L+ L
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD-----LKTYSVLVDCL 971
Query: 287 CKLDRIKESLHIVDIMACGQYGLN--ICSFNPILNSLTSRKKMEEAWHVIDMMKTV-GVS 343
C + R+ E LH + + GLN + +N I+N L ++EEA + + MKT G++
Sbjct: 972 CMVGRVDEGLHYFKELK--ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 344 PDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMV 403
PD+ ++N L+ G + A K+ I+ L + T++AL+ G +GK E A V
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 15/300 (5%)
Query: 191 FFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKR--ARDNCYNSTNTFKF 248
+F + + N N T Y + + G+ + + L+ KR RD TNT+
Sbjct: 104 YFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRD-----TNTYLT 158
Query: 249 IANTNNSLSILDDVTQTLARL----DNGFARMS-AYNTLIARLCKLDRIKESLHIVDIMA 303
I SLS+ + Q L + GF + +YN LI L K E++ + M
Sbjct: 159 IFK---SLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 304 CGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLM 363
+ ++ +++ ++ L R+ ++ ++ M+T+G+ P++ +F + G +
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN 275
Query: 364 AASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHII 423
A +++KR+++E G D TY L+ C A K++ A V +++ + T++ ++
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 424 SAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
F +F D +F +L L K G F EA L M+ + ++
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 218 AGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARL-DNGF-AR 275
AGR+R+ + Y L + T+ + + + +D+ + L+ + +NG
Sbjct: 481 AGRDREAKQIFYGLKDIGL---VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ N+LI L K DR+ E+ + M + + ++N +L L K++EA + +
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M G P+ +FN L C N + A KM+ ++ + D TY+ ++ G + G
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 396 KVEGALMVLRRIE 408
+V+ A+ +++
Sbjct: 658 QVKEAMCFFHQMK 670
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 112/275 (40%), Gaps = 2/275 (0%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y L+ G+ RD + + LL + + TF +++ + L R+D
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 271 N--GFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
+ + Y LI LC ++ + + + M G++ + ++ +L+ + + ++
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
M+ G PD+ +F L+ A C GN A + + ++ + + TY+ L+
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA 448
G R +++ AL + +E V T++ I + K G A++ + A
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA 465
Query: 449 LDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ + L K GR EAK + ++ LV
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN ++ K+ I E++ ++ M ++ N ++N+L +++EAW + MK
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ + P + ++N LL NG + A ++ + + ++ ++ T++ L C+ +V
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
AL +L ++ D T+ II +K G +A+ F
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
++N ++ L +E A V +K+ G PD+ ++N+LL AY +G + ++ K +
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGAL 401
E A++ T++ ++ G +AG V+ AL
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDAL 875
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 5/225 (2%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F ++ Y TLI CK + ++++M + NI ++N ++SL + + EA+
Sbjct: 991 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 1050
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+++ + G+ D ++ L+ C ++ A R+ + AD R + L+ C
Sbjct: 1051 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFC 1110
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTE 452
R K++ + + + + + T+ +IS + K G A+K+ D+
Sbjct: 1111 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSF 1170
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLR-----KYC 492
++G L S L K +EA + + M R L + R +YC
Sbjct: 1171 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 1215
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 269 LDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
+D GF + + +LI LCK IK++ +++ M + N+ + +++ L R
Sbjct: 880 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 939
Query: 328 EEAWHV-IDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDA 386
E+A+ + + ++++ P++ ++ ++ YC L A + R++E+ L + TY
Sbjct: 940 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 999
Query: 387 LVLGACRAGKVEGALMVLRRIEDD 410
L+ G C+AG A ++ + D+
Sbjct: 1000 LINGHCKAGSFGRAYELMNLMGDE 1023
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/269 (18%), Positives = 103/269 (38%), Gaps = 37/269 (13%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K V Y ++ +E N L ++ + + NT+ + N + +
Sbjct: 956 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 1015
Query: 265 TLARL-DNGF-ARMSAYNTLIARLCKLDRIKESLHIVD-IMACG---------------- 305
+ + D GF + YN I LCK R E+ +++ +CG
Sbjct: 1016 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 1075
Query: 306 -QYGLN-----ICSFNP------------ILNSLTSRKKMEEAWHVIDMMKTVGVSPDIT 347
Q +N C N ++ + +KKM+E+ + ++ ++G+ P
Sbjct: 1076 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 1135
Query: 348 SFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRI 407
++ +++ YC G++ A K ++ DS TY +L+ G C+ V+ A + +
Sbjct: 1136 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 1195
Query: 408 EDDKVHALHSTHLHIISAFLKLGYYAQAV 436
D + T + + + K A A+
Sbjct: 1196 IDRGLSPPEVTRVTLAYEYCKRNDSANAM 1224
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 269 LDNGFARMSAYNTLI-ARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
+ GF +A TLI LC+ + ++ M + N+ +F +++ L + +
Sbjct: 845 IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 904
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM-MKRIEEEELGADSRTYDA 386
++A+ +++ M G P++ + L+ C G A ++ +K + + + TY +
Sbjct: 905 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 964
Query: 387 LVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRD 446
++ G C+ K+ A M+ R+++ + +T+ +I+ K G + +A + + +
Sbjct: 965 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 1024
Query: 447 AALDTESFGLLASKLVKLGRFEEAKVVL 474
+ ++ L K R EA +L
Sbjct: 1025 FMPNIYTYNAAIDSLCKKSRAPEAYELL 1052
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 76/157 (48%)
Query: 272 GFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAW 331
GF + +Y+TLI C+ +++ + + M +N+ ++ ++ + A
Sbjct: 321 GFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAK 380
Query: 332 HVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGA 391
++D M +G+SPD + +L C +GN+ A + + E E+ D+ +Y++L+ G
Sbjct: 381 KLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
Query: 392 CRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLK 428
CR+G+V A+ + ++ + T II ++
Sbjct: 441 CRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIR 477
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 92/207 (44%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YN L+ R C++ + + + + ++ S++ ++ + +A+ + + M
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G+ ++ ++ L+ A+ GN A K++ ++ E L D Y ++ C++G V
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNV 411
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A V + + ++ ++ +IS + G +A+K G++ D +F +
Sbjct: 412 DKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFI 471
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRLVM 484
L++ + A V +M + +
Sbjct: 472 IGGLIRGKKLSAAYKVWDQMMDKGFTL 498
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 272 GFARMS-AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEA 330
GF+ + Y+ I+ LCK+ + ++ M + +I +FN L+ L K+ A
Sbjct: 74 GFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFA 133
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
M G PD+ S+ L+ G + A ++ + + D++ ALV+G
Sbjct: 134 VQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVG 193
Query: 391 ACRAGKVEGAL-MVLRRIEDDKVHALHSTHLHIISAFLKLGYY--AQAVKFVMIYAGRDA 447
C A KV+ A MV I+ +V + +IS F K G A+A+K M G +
Sbjct: 194 LCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEP 253
Query: 448 ALDT 451
L T
Sbjct: 254 DLVT 257
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 257 SILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNP 316
S+LD + + LD + YN +I K I+E+L + ++ ++ +FN
Sbjct: 454 SLLDSLISSGETLD-----IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 508
Query: 317 ILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEE 376
++ + + EA ++D++K G++P + S+ L+ AY GN + ++ + ++ E
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRR------------IEDDKVHALHSTHLHIIS 424
+ + TY + G CR K E VLR +E + + T+ II
Sbjct: 569 IPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Query: 425 AFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVM 484
++ + + A F+ I R+ + ++ +L L G +A + +Q + + +
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 688
Query: 485 S 485
S
Sbjct: 689 S 689
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 269 LDNGFAR-MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLN-ICSFNPILNSLTSRKK 326
LD G + + Y L+ C+L I L ++ M + LN I + +L+ L +
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378
Query: 327 MEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDA 386
++EA + + MK G+SPD+ +++ ++ C G A + + ++ + +SRT+ A
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 387 LVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLH----IISAFLKLGYYAQAVKFVMIY 442
L+LG C+ +G L+ R + D + + + + +I + K G +A++ +
Sbjct: 439 LLLGLCQ----KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 443 AGRDAALDTESFGLLASKLVKLGRFEEAKVVL 474
+F L K EA+ +L
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 109/239 (45%), Gaps = 3/239 (1%)
Query: 242 STNTFKFIANTNNSLSILDDVTQTLARL-DNG-FARMSAYNTLIARLCKLDRIKESLHIV 299
S TF +A S D + + ++G F ++++NT++ LCK R++++ +
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 300 DIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYN 359
+ G++ ++ ++N ILN K+ +A V+ M G++P++T++N +L +
Sbjct: 185 RALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 360 GNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTH 419
G + A + +++ + D TY +V G AG+++ A V + + V +T+
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 420 LHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+I K AV R + ++ +L L G F + +++ M+
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 150/385 (38%), Gaps = 60/385 (15%)
Query: 119 DLNKVFIQLTLEFLTKQKFEAYDSKGTIVAGDKTKELAHSSTPNLKIESLPFLRKLHHIS 178
D VF LT T +F Y S + K + S P I S ++KL I+
Sbjct: 8 DFAAVFRHLTSPLSTSSRFLFYSSS----EHEARKPIV--SNPKSPIGSPTRVQKL--IA 59
Query: 179 PNCRPILSITTRFFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDN 238
P+L+ +A+Q PN F R+ L+ GR R FN++ +L K
Sbjct: 60 SQSDPLLAKEIFDYASQQPN---FRHSRSSHLI--LILKLGRGRYFNLIDDVLAKHRSSG 114
Query: 239 CYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHI 298
+ F ++ + + V T F +M +N + H+
Sbjct: 115 YPLTGEIFTYLIKVYAEAKLPEKVLST-------FYKMLEFNF----------TPQPKHL 157
Query: 299 VDIMACGQYGLNICSFNPILNSLTS-RKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYC 357
N IL+ L S R +++A+ + + GV P+ S+N L+ A+C
Sbjct: 158 ----------------NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 358 YNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHS 417
N +L A ++ ++ E ++ D +Y L+ G CR G+V GA+ +L DD ++
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL----DDMLNKGFV 257
Query: 418 THLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTESFGLLASKLVKLGRFEEA-KVVL 474
+I G + + K++ MI G + L G+ EEA VV
Sbjct: 258 PDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSN--CLVKGFCSFGKVEEACDVVE 315
Query: 475 KEMQGRRLVMSDK----LRKYCNSD 495
M+ + SD + CN D
Sbjct: 316 VVMKNGETLHSDTWEMVIPLICNED 340
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
SFN ILN L S K +E + +GV D N L+ C +GNL AA +++
Sbjct: 169 SFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEF 228
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
+++ + T+ L+ G C GK E A +L R+E +++ T +IS K G
Sbjct: 229 PQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRV 288
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ + + + + ++ + L+ R EAK ++ +M
Sbjct: 289 EEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 239 CYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSA--YNTLIARLCKLDRIKESL 296
C+ S+ +F FI N S + D++ + + A N LI LC+ ++ +L
Sbjct: 163 CWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAAL 222
Query: 297 HIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAY 356
++D + N+ +F+P++ ++ K EEA+ +++ M+ + PD +FN L++
Sbjct: 223 QLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGL 282
Query: 357 CYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
G + +++R++ + + TY ++ G
Sbjct: 283 RKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 59/119 (49%)
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
++ C N ++ L +E A ++D P++ +F+ L+ +C G A K+
Sbjct: 200 IDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKL 259
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFL 427
++R+E+E + D+ T++ L+ G + G+VE + +L R++ T+ ++ L
Sbjct: 260 LERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACG-QYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN L+ LCK + VD M ++ SF +++++ + K + EA +++ +
Sbjct: 197 YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKL 256
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G PD +N ++ +C A + K+++EE + D TY+ L+ G +AG+V
Sbjct: 257 GNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRV 316
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLG 430
E A M L+ + D +T+ +++ + G
Sbjct: 317 EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
++ LI +C ++E++++V + + + +N I+ + K EA V M
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
K GV PD ++N L+ G + A +K + + D+ TY +L+ G CR G
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
++ YN LI RLCK + + ++ +D + N S+ P++ + K+ + A ++
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M G PDI ++ L+ +G++ A M ++ + + D+ Y+ L+ G C+ G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+ A ++ + D + + +I F++ G + +A K + + +D
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 456 LLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ + G +EA + M LV
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLV 552
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 115/279 (41%), Gaps = 7/279 (2%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARL- 269
Y L+ A + +++++ LL + A C T+ + + +DD +L
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 270 DNGFARMSA-YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
D G + +A YN L++ LCK R + + M + + +++ +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
EA V + GV D+ N ++ +C +G L A M R+ EE L D TY ++
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAA 448
G + + A+ + R +E +K T+ +I+ F G + A + RD
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Query: 449 LDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDK 487
+ ++ L L K E+ + K + L+M++K
Sbjct: 623 PNVVTYTTLIRSLAK-----ESSTLEKAVYYWELMMTNK 656
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ ++N ++N L K E A +D G+ P+ S+ L+ AYC + ASK++
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
++ E D TY L+ G +G ++ A+ + ++ D V + + ++S K
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVL 474
G + A R+ D + L ++ G F+EA+ V
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF 508
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 107/247 (43%), Gaps = 5/247 (2%)
Query: 253 NNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNIC 312
+ SLS ++ + L + + A N+L++ L K R+ ++ + D M ++
Sbjct: 147 SGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNY 206
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
S ++ + + K+E +I+ G P+I +N ++ YC G++ A + K +
Sbjct: 207 STCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
+ + T+ ++ G C+ G + +L +++ + +II A + GY
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSD-----K 487
+ + D D ++ +L ++L K G+ E A L E + L+ ++
Sbjct: 327 VDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPL 386
Query: 488 LRKYCNS 494
++ YC S
Sbjct: 387 IQAYCKS 393
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 4/211 (1%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YN LI C+ K++ + D M ++ ++ L + K EA + + +
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G+ PD+ N L+ +C GN+ A ++K ++ + D TY+ L+ G C GK
Sbjct: 459 VGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKF 518
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLG--YYAQAVKFVMIYAGRDAALDTESFG 455
E A ++ ++ + H ++ +IS + K G +A V+ M+ G + L T +
Sbjct: 519 EEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT--YN 576
Query: 456 LLASKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
L L K E A+ +L+EM+ +V +D
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPND 607
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+N +I LCK ++K++ + IM I ++N ++ + R ++E A +I M
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K+ G PD+ ++N +L+ C G AS++++ ++E L DS +Y+ L+ G G +
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 398 EGAL 401
E A
Sbjct: 344 EMAF 347
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 7/204 (3%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHV 333
M YN +++ +C R E L + + GL + S+N ++ ++ +E A+
Sbjct: 295 MQTYNPILSWMCNEGRASEVLREMK-----EIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 334 IDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACR 393
D M G+ P ++N L+ + AA +++ I E+ + DS TY+ L+ G C+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 394 AGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTES 453
G + A + + D + T+ +I + +A + G+ D
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 454 FGLLASKLVKLGRFEEAKVVLKEM 477
L +G + A +LKEM
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEM 493
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 3/279 (1%)
Query: 200 NSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSIL 259
N +P+ + ++N GR F + ++ NC + +F + N +
Sbjct: 98 NKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKF 157
Query: 260 DDVTQTLARLDNGFA---RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNP 316
D V L + +++YNTLI LC E++ ++D + + +FN
Sbjct: 158 DLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNI 217
Query: 317 ILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEE 376
+L+ ++ K EE + M V DI S+N L + +++ E
Sbjct: 218 LLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNE 277
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
L D T+ A++ G GK++ A+ + IE + L ++ A K G A
Sbjct: 278 LKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAY 337
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLK 475
+ + +D + LVK + +EA+ +++
Sbjct: 338 ELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ S+N ++ L + EA +ID ++ G+ PD +FN LL G ++
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
R+ E+ + D R+Y+A +LG K E + + +++ +++ T +I F+
Sbjct: 236 ARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSE 295
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
G +A+ + F L + K G E A + KE+ +RL++ +
Sbjct: 296 GKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F + Y+ +I C+ R ++ ++ M Q ++ +F+ ++N+L K+ EA
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ M G+ P ++N ++ +C L A +M+ + + D T+ L+ G C
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY--AQAVKFVMIYAGRDAALD 450
+A +V+ + + + + A T+ +I F ++G AQ + VMI +G A +
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG--VAPN 285
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+F + + L +A +L+++Q
Sbjct: 286 YITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 1/231 (0%)
Query: 254 NSLSILDDVTQTLARLDNGFAR-MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNIC 312
N L V Q LA +D Y T+I LCK+ + +L+++ M ++
Sbjct: 18 NGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVV 77
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
+N I++ L A ++ M G+ PD+ +++ ++ ++C +G A ++++ +
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
E ++ D T+ AL+ + GKV A + + + T+ +I F K
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
A + + A + + D +F L + K R + + EM R +V
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 67/143 (46%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F YN++I CK DR+ ++ ++D MA ++ +F+ ++N K+++
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ M G+ + ++ L+ +C G+L AA ++ + + + T+ +++ C
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Query: 393 RAGKVEGALMVLRRIEDDKVHAL 415
++ A +L ++ + H L
Sbjct: 298 SKKELRKAFAILEDLQKSEGHHL 320
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 108/247 (43%), Gaps = 3/247 (1%)
Query: 240 YNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIV 299
Y +T+T+ +DD + L+ + + +YNTL+ K+ + E+ +
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSM--AAPDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 300 DIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYN 359
D + G +I ++N +++ L +E A + + M T + PD+ ++ L+ + N
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 360 GNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTH 419
GNL A+++ + + + D Y +G R G + A + + HA T
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 420 LHI-ISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
++ I K+G +A++F D ++ + ++ G+F+ A+ + EM
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 479 GRRLVMS 485
+RL S
Sbjct: 578 RKRLYPS 584
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 32/213 (15%)
Query: 256 LSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFN 315
L +D + + R + F+ ++ YN LI K +++E+ M + + SFN
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVT-YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYC------------------ 357
P++ + ++AW V D M G+ P +++N + A C
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372
Query: 358 ----YNGNLMAASKMMKRIEEEELGADSR---------TYDALVLGACRAGKVEGALMVL 404
YN + KM K +E L D R TY+ L+ G C +G +EGA +
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 405 RRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
+ + T+ ++ F+K G + A +
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 87/201 (43%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ +Y LI C+ ++ ++ ++D M + + S+ +LNSL + ++ EA+ ++
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLC 284
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
MK G +PD+ +N ++ +C M A K++ + +S +Y L+ G C G
Sbjct: 285 RMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+ L + S ++ F G +A V + L ++++
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWE 404
Query: 456 LLASKLVKLGRFEEAKVVLKE 476
++ + E+ K+ L++
Sbjct: 405 MVIPLICNEDESEKIKLFLED 425
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 47/287 (16%)
Query: 119 DLNKVFIQLTLEFLTKQKFEAYDSKGTIVAGDKTKELAHSSTPNLKIESLPFLRKLHHIS 178
D VF LT T +F Y S + K + S P I S ++KL I+
Sbjct: 8 DFAAVFRHLTSPLSTSSRFLFYSSS----EHEARKPIV--SNPKSPIGSPTRVQKL--IA 59
Query: 179 PNCRPILSITTRFFATQSPNTNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDN 238
P+L+ +A+Q PN + + + + L+ GR R FN++ +L K
Sbjct: 60 SQSDPLLAKEIFDYASQQPNF-----RHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSG 114
Query: 239 CYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHI 298
+ F ++ + + V T F +M +N + H+
Sbjct: 115 YPLTGEIFTYLIKVYAEAKLPEKVLST-------FYKMLEFNF----------TPQPKHL 157
Query: 299 VDIMACGQYGLNICSFNPILNSLTS-RKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYC 357
N IL+ L S R +++A+ + + GV P+ S+N L+ A+C
Sbjct: 158 ----------------NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFC 201
Query: 358 YNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
N +L A ++ ++ E ++ D +Y L+ G CR G+V GA+ +L
Sbjct: 202 LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 126/290 (43%), Gaps = 40/290 (13%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y+ +V+ G+ R+F+++ L+N+ + N + L LD +++ + RL
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNK--------------NEESKLVTLDTMSKVMRRLA 214
Query: 271 ---------NGFARMS----------AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNI 311
+ F M A N+L+ L K + I E H V + +
Sbjct: 215 KSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSI-EHAHEVFLKLFDTIKPDA 273
Query: 312 CSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKR 371
+FN +++ +K ++A ++D+MK +PD+ ++ + AYC G+ ++M++
Sbjct: 274 RTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEE 333
Query: 372 IEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKV---HALHSTHLHIISAFLK 428
+ E + TY ++ ++ +V AL V ++++D +S+ +HI+S K
Sbjct: 334 MRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS---K 390
Query: 429 LGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
G + A + + D + + S + R E A +LK M+
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 99/215 (46%), Gaps = 11/215 (5%)
Query: 279 YNTLIARLCK---LDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
Y + + CK R+ E L + C N+ ++ +++SL K++ EA V +
Sbjct: 311 YTSFVEAYCKEGDFRRVNEMLEEMRENGCNP---NVVTYTIVMHSLGKSKQVAEALGVYE 367
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
MK G PD ++ L+ G A+++ + + + + D Y+ ++ A
Sbjct: 368 KMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHS 427
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMI----YAGRDAALDT 451
+ E AL +L+R+ED++ + S ++ + LK+ + + +K + I D ++D
Sbjct: 428 RDEMALRLLKRMEDEEGESC-SPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDV 486
Query: 452 ESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSD 486
++ LL L G+ EEA + +E + +V D
Sbjct: 487 STYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRD 521
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
Query: 254 NSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIV-DIMACGQYGLNIC 312
N+L +++ +T + + NG Y T+I LCK+ + ++ ++ +++ + ++
Sbjct: 531 NALEVVNHMTSSNIEV-NGVV----YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
S+N I++ +M+ A + M G+SP++ ++ L+ C N + A +M +
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
+ + + D Y AL+ G C+ +E A + + ++ ++ + +IS F LG
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
A+ D ++ L L+K G A + EMQ LV
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 6/203 (2%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGL-NICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+T+I K + +E+L + D + GL N+ N IL+ L + K +EA ++ M+
Sbjct: 413 HTIIQGWLKGQKHEEALKLFD--ESFETGLANVFVCNTILSWLCKQGKTDEATELLSKME 470
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ G+ P++ S+N ++ +C N+ A + I E+ L ++ TY L+ G R +
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTESFGL 456
AL V+ + + + II+ K+G ++A + + MI R + S+
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR-LCVSCMSYNS 589
Query: 457 LASKLVKLGRFEEAKVVLKEMQG 479
+ K G + A +EM G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCG 612
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
Query: 269 LDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
+ G A + NT+++ LCK + E+ ++ M G N+ S+N ++ +K M+
Sbjct: 436 FETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
A V + G+ P+ +++ L+ N + A +++ + + + Y ++
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Query: 389 LGACRAGKVEGALMVLRR-IEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDA 447
G C+ G+ A +L IE+ ++ ++ II F K G AV G
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 448 ALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+ + ++ L + L K R ++A + EM+ +
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y +L+ LCK +R+ ++L + D M L+I ++ +++ R ME A + +
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G++P +N L++ + GN++AA + K++ ++ L D TY L+ G + G +
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
A + ++ + + I++ K G + + VK
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 91/179 (50%), Gaps = 23/179 (12%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
++ ++ + + M++A + D M + G+S ++ + L+T +C N +L++A + ++
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHST--HLH-IISAFLKL 429
E+E +S T+ L+ + G++E AL +++E V L + H+H II +LK
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME---VLGLTPSVFHVHTIIQGWLKG 422
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGL--------LASKLVKLGRFEEAKVVLKEMQGR 480
+ +A+K D + +T GL + S L K G+ +EA +L +M+ R
Sbjct: 423 QKHEEALKLF------DESFET---GLANVFVCNTILSWLCKQGKTDEATELLSKMESR 472
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 129/289 (44%), Gaps = 22/289 (7%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD V + ++L+N G+ + L N + + T T + + N + L +
Sbjct: 336 PD---VVFLNNLMNILGK---VGRVEELTNVFSEMGMWRCTPT---VVSYNTVIKALFES 386
Query: 263 TQTLARLDNGFARMSA---------YNTLIARLCKLDRIKESLHIVDIMACGQYGLNIC- 312
++ + + F +M A Y+ LI CK +R++++L +++ M + G C
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM--DEKGFPPCP 444
Query: 313 -SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKR 371
++ ++N+L K+ E A + +K + + ++ + G L A +
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 372 IEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGY 431
++ + G D Y+AL+ G +AG + A +LR++E++ A ++H I++ F + G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 432 YAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+A++ D ++ L G FEEA +++EM+ +
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 6/191 (3%)
Query: 201 SFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYN-STNTFKFIANTNNSLSIL 259
FP A Y L+NA G+ + + + L K ++N N S+ + + L
Sbjct: 439 GFPP--CPAAYCSLINALGKAKRYEAANELF-KELKENFGNVSSRVYAVMIKHFGKCGKL 495
Query: 260 DDVTQTLARLDN--GFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
+ + N + AYN L++ + K I E+ ++ M +I S N I
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII 555
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
LN A + + +K G+ PD ++N LL + + G A++MM+ ++++
Sbjct: 556 LNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Query: 378 GADSRTYDALV 388
D+ TY +++
Sbjct: 616 EYDAITYSSIL 626
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F + YN +I C R ++ ++ M Q +I +F+ ++N+ +K+ EA
Sbjct: 42 FPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEE 101
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ M + P ++N ++ +C + A +M+ + + D T+ L+ G C
Sbjct: 102 IYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC 161
Query: 393 RAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY--AQAVKFVMIYAGRDAALD 450
+A +V+ + + + + A T+ +I F ++G AQ + MI G A D
Sbjct: 162 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG--VAPD 219
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+F + + L +A +L+++Q
Sbjct: 220 YITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 67/143 (46%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F YN++I CK DR+ ++ ++D MA ++ +F+ ++N K+++
Sbjct: 112 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 171
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ M G+ + ++ L+ +C G+L AA ++ + + D T+ ++ G C
Sbjct: 172 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 231
Query: 393 RAGKVEGALMVLRRIEDDKVHAL 415
++ A +L ++ + H L
Sbjct: 232 SKKELRKAFAILEDLQKSEDHHL 254
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARL- 269
Y+ ++++ + + ++ ++ + D T+ + N L D + + L +
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 270 DNGFAR-MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
+GF+ + YN L+ L ++ +L++++ M + F +++ L+ K+E
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
+ +D VG +PD+ + ++T Y G L A +M K + E+ + TY++++
Sbjct: 345 ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMI 404
Query: 389 LGACRAGKVEGALMVLRRIE 408
G C AGK + A +L+ +E
Sbjct: 405 RGFCMAGKFKEACALLKEME 424
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 100/237 (42%), Gaps = 6/237 (2%)
Query: 245 TFKFIANTNNSLSILDDVTQTLARLDNG--FARMSAYNTLIARLCKLDRIKESLHIVDIM 302
T+ + T L L+ V L + +G +++YN L+ K IKE++ + M
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 303 ACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL 362
N +++ +LN + ++ + MK+ PD ++N L+ + G
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
+ + EE + D TY+ ++ + G E A +L+ + + + + +
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGV 463
Query: 423 ISAFLKLGYYAQA-VKF-VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
I AF + Y +A V F M G + +++T F L + G +E++ +L +
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIET--FHSLLYSFARGGLVKESEAILSRL 518
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 123/290 (42%), Gaps = 13/290 (4%)
Query: 206 RTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANT--------NNSLS 257
R+V Y L+NA GR + LL++ + S T+ + N L
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLG 233
Query: 258 ILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
+ ++ + D + YNTL++ E+ + M G ++ +++ +
Sbjct: 234 LFAEMRHEGIQPD-----IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+ + +++E+ ++ M + G PDITS+N LL AY +G++ A + +++
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
++ TY L+ ++G+ + + ++ +T+ +I F + GY+ + V
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 438 FVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDK 487
+ D E++ + K G E+A+ +L+ M +V S K
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSK 458
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 110/260 (42%), Gaps = 30/260 (11%)
Query: 266 LARLDNGFARMSAYNTLIARLCK-----------------LDRIKESLHIVDI---MACG 305
++R+ N +++Y +L+ LC + ++++L +VD M G
Sbjct: 50 ISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKG 109
Query: 306 -----QYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNG 360
+Y L +N +L+SL +EE + M VSPDI +FN L+ YC G
Sbjct: 110 DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 361 NLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHL 420
++ A + + + + D TY + + G CR +V+ A V + + + H ++
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 421 HIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+I + +A+ ++ + + ++ +L L G+ EA + K+M
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 481 RLVMSDKL-----RKYCNSD 495
+ D + + +C+ D
Sbjct: 290 GIKPDDCMYTVLIQSFCSGD 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y + R ++ + + + ++ C+ + ++ + +D+
Sbjct: 188 PDYFT---YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 263 TQTLARL--DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
L ++ DN + Y LI LC + E++++ M+ + C + ++ S
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
S ++EA +++ M G+ P++ ++N L+ +C N+ A ++ ++ E+ L D
Sbjct: 305 FCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPD 363
Query: 381 SRTYDALVLGACRAG 395
TY+ L+ G C +G
Sbjct: 364 LITYNTLIAGQCSSG 378
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 67/138 (48%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+Y LI L + +I E+L ++ M N+ ++ ++++L + EA ++ M
Sbjct: 227 SYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQM 286
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
G+ PD + L+ ++C L AS +++ + E L + TY+AL+ G C+
Sbjct: 287 SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVH 346
Query: 398 EGALMVLRRIEDDKVHAL 415
+ ++ + +E + V L
Sbjct: 347 KAMGLLSKMLEQNLVPDL 364
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%)
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
N L+ LCK + I+ + ++D + N+ ++ IL +R ME A V++ M
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD 254
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G PD T++ L+ YC G A+ +M +E+ E+ + TY ++ C+ K
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
A + + + S +I A + +A + D L
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 460 KLVKLGRFEEAKVVLKEMQ 478
L K GR EA+ + E +
Sbjct: 375 WLCKEGRVTEARKLFDEFE 393
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 65/119 (54%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
NI + N ++ +L + +E A+ V+D + ++G+ P++ ++ +L Y G++ +A +++
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLK 428
+ + + D+ TY L+ G C+ G+ A V+ +E +++ T+ +I A K
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 130/306 (42%), Gaps = 14/306 (4%)
Query: 192 FATQSPNTNSFPDKRTVAYYDDLVNAAGRER--DFNMLHYLLNKRARDNCYNSTNTFKFI 249
+ T+ P +P + + LV+ +++ D + +L ++ ++ +T+ I
Sbjct: 33 YCTEKPPIKPWPQR---LFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSI 89
Query: 250 ANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCK----LDRIKESLHIVDIMACG 305
+ D V +A L N + + L L + R + S+ I +
Sbjct: 90 LFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRI--FLRIP 147
Query: 306 QYGL--NICSFNPILNSLTSRKKMEEAWHVIDMMK-TVGVSPDITSFNYLLTAYCYNGNL 362
+G+ ++ S N +LN L ++ + + K + G++P+I + N L+ A C ++
Sbjct: 148 DFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
+A K++ I L + TY ++ G G +E A VL + D + +T+ +
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 423 ISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
+ + KLG +++A + + + ++G++ L K + EA+ + EM R
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF 327
Query: 483 VMSDKL 488
+ L
Sbjct: 328 MPDSSL 333
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 2/210 (0%)
Query: 269 LDNG-FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
LD G + + Y L+ CKL R E+ ++D M + N ++ ++ +L KK
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
EA ++ D M PD + ++ A C + + A + +++ + D+ L
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDA 447
+ C+ G+V A + E + +L T+ +I+ + G +A + R
Sbjct: 373 IHWLCKEGRVTEARKLFDEFEKGSIPSLL-TYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 448 ALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ ++ +L L K G +E VL+EM
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
>AT1G19520.1 | Symbols: NFD5 | NFD5 (NUCLEAR FUSION DEFECTIVE 5) |
chr1:6760032-6762581 FORWARD
Length = 725
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 84/174 (48%), Gaps = 3/174 (1%)
Query: 307 YGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAAS 366
+ +I ++ +++ +E+ ++ M G+ PDI + L+ Y +GN A+
Sbjct: 380 FNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERAT 439
Query: 367 KMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAF 426
+ + ++ L D + Y+A++LG AGK + +++ ++ ++ A ++ ++ A+
Sbjct: 440 EAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAY 499
Query: 427 LKLG--YYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
++G A + M YA D L E++ L K G+ ++AK EM+
Sbjct: 500 AQMGDANGAAGISSSMQYAS-DGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMR 552
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y LV R RD + + ++ NC + + + +D + +
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG 270
Query: 271 NGFARMSAYN--TLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
N + AY+ I C + + ++D M N+ +FN I+ +L +K++
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
+A+ ++D M G +PD ++N ++ +C + + A+K++ R++ + D TY+ ++
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFL-KLGYYAQAVKFVMIYAGRDA 447
R G+ + A + + + K + +T+ +I + K G +A ++ +
Sbjct: 391 KLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Query: 448 ALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ + +L ++LV G+ + V+ +M+
Sbjct: 451 PPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 125/314 (39%), Gaps = 39/314 (12%)
Query: 202 FPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDD 261
FP TV+ + L+ + G+ L ++ K + + T+ F+ N S +D
Sbjct: 183 FP--MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDS 240
Query: 262 VTQTLARLDNGFAR--MSAYNTLIARLCKLDRIKESL----------HIVD-------IM 302
+ +++G + + YNT+I CK + ++++ H D I
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 303 AC----------------GQYGLNIC--SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSP 344
AC + G+ + +F+ ++ L K+ E + V + M G P
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360
Query: 345 DITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
++ + L+ Y +G++ A +++ R+ +E D TY +V G C+ G+VE AL
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 405 RRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKL 464
D + + +I K G +A + + + D+ + L K
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 465 GRFEEAKVVLKEMQ 478
+ +EA + K M+
Sbjct: 481 RKVDEAIALFKRME 494
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 76/172 (44%)
Query: 306 QYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAA 365
++ + + + N ++ S +EE V MK G+ P + ++N+L+ + +A
Sbjct: 182 EFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA 241
Query: 366 SKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISA 425
++ + +E + D TY+ ++ G C+AG+ + A+ LR +E A T++ +I A
Sbjct: 242 ERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
Query: 426 FLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ V + + +F L+ L K G+ E V + M
Sbjct: 302 CYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENM 353
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 57/107 (53%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y TLI C++ R++ ++ +++ M + +N FNPI++ L ++ EA +++
Sbjct: 288 YGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFF 347
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYD 385
P I ++N L+ +C G+L ASK++K + + + TY+
Sbjct: 348 VCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 130/328 (39%), Gaps = 61/328 (18%)
Query: 207 TVAYYDDLVNAAGRERDFNMLHYLLNKRAR-DNCYN--STNTFKFIANTNNSLSILDDVT 263
+ + +D +VN+ + R+F + L+ R R D N S +TF + ++
Sbjct: 134 SPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAI 193
Query: 264 QTLARLDNGFAR-----------MSAYNTLIARLCKLDRIKE-SLHIVDIMAC--GQYGL 309
+ FAR + L+ LCK ++E S+++ I +
Sbjct: 194 RAFE-----FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVP 248
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYC------------ 357
++ FN +LN +K+++A + + MK + V P + ++ L+ YC
Sbjct: 249 SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVL 308
Query: 358 --------------YN---------GNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
+N G L A MM+R E G TY++LV C+A
Sbjct: 309 EEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKA 368
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK--FVMIYAGRDAALDTE 452
G + GA +L+ + V +T+ H F K + + F +I AG D
Sbjct: 369 GDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP--DRL 426
Query: 453 SFGLLASKLVKLGRFEEAKVVLKEMQGR 480
++ L+ L + G+ A V KEM+ R
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNR 454
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 37/241 (15%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+ L+ LCK +KE+ + + M ++ N+ F +L K+ EA V+ M
Sbjct: 204 VFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQM 262
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMM--------------------------KR 371
K G+ PDI F LL+ Y + G + A +M KR
Sbjct: 263 KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 372 IEE--------EELG--ADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLH 421
++E E G AD TY AL+ G C+ G ++ VL + V T++
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 422 IISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
I+ A K + + ++ + R D + ++ KLG +EA + EM+
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 482 L 482
L
Sbjct: 443 L 443
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 314 FNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIE 373
F ++ S +++A V+D M G+ PD F LL A C NG++ ASK+ + +
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM- 228
Query: 374 EEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYA 433
E+ + R + +L+ G CR GK+ A VL ++++ + +++S + G A
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 434 QAVKFVMIYAGRDAALDTESFGLLASKLVKL-GRFEEAKVVLKEMQ 478
A + R + + +L L + R +EA V EM+
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 272 GF-ARMSAYNTLIARLCKLD-RIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKM 327
GF ++ Y LI LC+ + R+ E++ + M +YG +I ++ +++ +
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME--RYGCEADIVTYTALISGFCKWGMI 358
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
++ + V+D M+ GV P ++ ++ A+ +++++++ D Y+ +
Sbjct: 359 DKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGR 445
+ AC+ G+V+ A+ + +E + + T + +I+ F G+ +A M+ G
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 446 DAALDTESFGLLASKLVKLGRFEEAKVV 473
+A + L + LV+ + E AK V
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 251 NTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIV-DIMACGQYGL 309
+ + +L L D + R+D Y+ ++ LCK R+ E+ ++ ++++ G
Sbjct: 398 HADEALWFLKDAQEKGFRIDK-----LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ ++ ++N ++++A ++ +M T G P+ S+ LL C G + A +MM
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRI 407
EE +S TY ++ G R GK+ A V+R +
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM 550
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 1/217 (0%)
Query: 261 DVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
D+ + +A+ YNTLI L K D E+L + + ++ ++ I+++
Sbjct: 368 DLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA 427
Query: 321 LTSRKKMEEAWHVIDMMKTVG-VSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGA 379
L +M EA +I+ M + G PD+ ++ ++ +C G + A K+++ +
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Query: 380 DSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
++ +Y AL+ G CR GK A ++ E+ T+ I+ + G ++A V
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547
Query: 440 MIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKE 476
+ LL L + GR EA+ ++E
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/203 (17%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
A++ ++ + +++++L ++ +M N+ N ++ ++E+A ++ M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ VG+ P++ ++N ++ YC + A ++++ + + D +Y ++ C+ ++
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 398 EGALMVLRRIEDDKVHAL---HSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF 454
+++++ K H L T+ +I K + +A+ F+ + +D +
Sbjct: 364 VEVRDLMKKMA--KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 455 GLLASKLVKLGRFEEAKVVLKEM 477
+ L K GR EAK ++ EM
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEM 444
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%)
Query: 265 TLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSR 324
T+ RL +G + YNT++ K + ++L M + ++C+FN ++N
Sbjct: 182 TMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRS 241
Query: 325 KKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTY 384
K + A + MK G P++ SFN L+ + +G + KM + E T
Sbjct: 242 SKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATC 301
Query: 385 DALVLGACRAGKVEGA 400
+ LV G CR G+V+ A
Sbjct: 302 EILVDGLCREGRVDDA 317
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 1/203 (0%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
YNT+I K ++ +M N ++ ++ KM +A + D M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ G+ D+ + L++ C GN+ A + + E+ L S TY AL+ G C+ G++
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A +++ ++ V+ +I + + G +A + + D + +
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 458 ASKLVKLGRFEEAKV-VLKEMQG 479
AS +L R++EAK + + M+G
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEG 463
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 96/211 (45%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+NTLI C+ + E+ I D+M + ++ + N I + K+ +EA + M
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
GV S+ L+ YC GN+ A ++ + + + ++ TY+ ++ C+ GK+
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
+ A + +E + + T+ +I +A++ + ++ ++ ++
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
S L K G+ +EA + EM+ + + +K+
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 249 IANTNNSLSILDDVTQTLARLDNGFARMS--AYNTLIARLCKLDRIKESLHIVDIMACGQ 306
IA+ N L D+ Q L R+ G ++S +Y LI CK ++E+ + M+
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 307 YGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAAS 366
N ++N ++ + + K++EA + M+ G+ PD ++ L+ C N+ A
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 367 KMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIE------DDKVHALHSTHL 420
++ + + L +S TY ++ G +AGK + A + ++ D+KV+ +
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Query: 421 H 421
H
Sbjct: 620 H 620
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 123/273 (45%), Gaps = 6/273 (2%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARL- 269
Y+ ++NA ++RDF+ + +L +D + T+ + + + D + +
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 270 DNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSF--NPILNSLTSRKK 326
+ G + + Y +LI+ C+ +K + + D + + GL+ S+ +++ + +
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT--EKGLSPSSYTYGALIDGVCKVGE 379
Query: 327 MEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDA 386
M A +++ M++ GV+ FN L+ YC G + AS + +E++ AD T +
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 387 LVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRD 446
+ R + + A L R+ + V ++ ++I + K G +A + + + +
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 447 AALDTESFGLLASKLVKLGRFEEAKVVLKEMQG 479
+ ++ ++ K G+ +EA+ + M+
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/222 (17%), Positives = 92/222 (41%), Gaps = 2/222 (0%)
Query: 259 LDDVTQTLARLDNGFARMSAYN--TLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNP 316
+D + R+ + +++ Y+ ++ LC+ +++S ++ + ++N
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 317 ILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEE 376
I+N+ ++ V+ +MK GV + ++ L+ NG + A K+ + E
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 377 LGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
+ +D Y +L+ CR G ++ A ++ + + + T+ +I K+G A
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ + + F L + G +EA ++ M+
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
N+ S+N ++ + +R M EA V + MK GV DI ++N ++ C N ++ A ++
Sbjct: 280 NVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF 339
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFL-- 427
+ + + + TY+ LV G C+AG V+ L+V R ++ A T ++
Sbjct: 340 RDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDD 399
Query: 428 --------KLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQG 479
AV+ M Y R+ + LL +L + G+ + A + EM G
Sbjct: 400 RDGQRVVEAADIVKDAVREAMFYPSRNC------YELLVKRLCEDGKMDRALNIQAEMVG 453
Query: 480 R 480
+
Sbjct: 454 K 454
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 305 GQYGLNICSFNPILNSL---TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGN 361
G+ N +FN ++ S + +E W +M + VG SP++ S+N L+ AYC G
Sbjct: 239 GKIKPNATTFNSMMVSFYREGETEMVERIWR--EMEEEVGCSPNVYSYNVLMEAYCARGL 296
Query: 362 LMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLH 421
+ A K+ + ++ + D Y+ ++ G C +V A + R + + T+ H
Sbjct: 297 MSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEH 356
Query: 422 IISAFLKLG 430
+++ + K G
Sbjct: 357 LVNGYCKAG 365
>AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1672161-1673675 FORWARD
Length = 504
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 23/286 (8%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y +++ G+ + Y++ + D+C + F + T + L+D L
Sbjct: 49 YATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLH 108
Query: 271 --NGFARMSAYNTLIARLCKLDRIKESLHIVDIMACG-QYGLNICSFNPILNSLTSRKKM 327
N +++TL+ + K ++ + HI G + I + N ++ L +
Sbjct: 109 EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRS 168
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAAS----KMMKRIEEEELGADSRT 383
+ A V M G PD S+ L+ +C G L A+ M RI ++ G D
Sbjct: 169 DLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVV 228
Query: 384 YDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV---- 439
Y L+ C AG+V+ A+ +L +I + A + HI + G++ + + +
Sbjct: 229 YRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI-----EAGHWESSSEGIERVK 283
Query: 440 -----MIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+ G LD S+ +A+ L + G+ E + VL M+ +
Sbjct: 284 RLLTETLIRGAIPCLD--SYSAMATDLFEEGKLVEGEEVLLAMRSK 327
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 128/318 (40%), Gaps = 38/318 (11%)
Query: 202 FPDKRTVAYYDDLVNAAGRERDFNMLHY-LLNKRARDNCYNSTNTFKFIAN-------TN 253
F + V Y+ ++ RE F ML + + N+ + NC + TF + + T+
Sbjct: 156 FDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTS 215
Query: 254 NSLSILDDVTQ--------TLARLDNGFARMS----------------------AYNTLI 283
++ + DD+T T L +G + A+N L+
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 284 ARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVS 343
CKL R+ E+ ++ + + L + ++ +++ L ++ +A+ + M +
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 344 PDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMV 403
PDI + L+ G + A K++ + + + D+ Y+A++ C G +E +
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 404 LRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVK 463
+ + + TH +I + + G +A + + +F L L K
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Query: 464 LGRFEEAKVVLKEMQGRR 481
G +EA+++L +M+ R
Sbjct: 456 SGELKEARLLLHKMEVGR 473
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI L K +I+++L ++ M + +N ++ +L R +EE + M
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
PD + L+ + C NG + A ++ IE+ T++AL+ G C++G+++
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 399 GALMVLRRIEDDKVHAL-----HSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTES 453
A ++L ++E + +L HS + ++ G +A + + +A ++ D S
Sbjct: 461 EARLLLHKMEVGRPASLFLRLSHSGN-RSFDTMVESGSILKAYRDLAHFADTGSSPDIVS 519
Query: 454 FGLLASKLVKLGRFEEAKVVLKEMQ 478
+ +L + + G + A +L +Q
Sbjct: 520 YNVLINGFCRAGDIDGALKLLNVLQ 544
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 276 MSAYNTLIARLCKLDRIKES---LHIVDIMACGQYGLNIC-----SFNPILNSLTSRKKM 327
++ +N LI LCK +KE+ LH +++ L + SF+ ++ S + K
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAY 502
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
+ H D G SPDI S+N L+ +C G++ A K++ ++ + L DS TY+ L
Sbjct: 503 RDLAHFAD----TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTL 558
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHA 414
+ G R G+ E A + +DD H+
Sbjct: 559 INGLHRVGREEEAFKLF-YAKDDFRHS 584
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 2/181 (1%)
Query: 271 NGFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE 329
+GF + Y++LI L + R ++ + M +I + ++ L+ K+E+
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 330 AWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVL 389
A ++ M + G+SPD +N ++ A C G L + + E E D+ T+ L+
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILIC 416
Query: 390 GACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM-IYAGRDAA 448
CR G V A + IE +T +I K G +A + + GR A+
Sbjct: 417 SMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPAS 476
Query: 449 L 449
L
Sbjct: 477 L 477
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Query: 272 GFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEA 330
GF + A N + L ++ I + M Y N+ +FN ++ S K+ EA
Sbjct: 178 GFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEA 237
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM---MKRIEEEELGADSRTYDAL 387
V M GV P++ SFN ++ C G++ A ++ M + + ++ TY+++
Sbjct: 238 LSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSV 297
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDA 447
+ G C+AG+++ A + + V T+ ++ A+ + G +A++ +
Sbjct: 298 INGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGL 357
Query: 448 ALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRL 482
++T + + L G E A VL++M + +
Sbjct: 358 VVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNM 392
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 83/202 (41%), Gaps = 40/202 (19%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIV-DIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVI 334
++ +N +I CK ++ E+L + ++ CG + N+ SFN +++ M A ++
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWP-NVVSFNMMIDGACKTGDMRFALQLL 276
Query: 335 D---MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGA 391
MM VSP+ ++N ++ +C G L A ++ + + + + RTY ALV
Sbjct: 277 GKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAY 336
Query: 392 CRAGK-----------------------------------VEGALMVLRRIEDDKVHALH 416
RAG +EGA+ VLR + +
Sbjct: 337 GRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDR 396
Query: 417 STHLHIISAFLKLGYYAQAVKF 438
T ++ + GY +AV+F
Sbjct: 397 FTQAIVVRGLCRNGYVKEAVEF 418
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 307 YGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAAS 366
+ +++ + N + L + +++ W V M ++G ++ +FN ++ ++C L A
Sbjct: 179 FCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEAL 238
Query: 367 KMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRR---IEDDKVHALHSTHLHII 423
+ R+ + + + +++ ++ GAC+ G + AL +L + + + V T+ +I
Sbjct: 239 SVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVI 298
Query: 424 SAFLKLGY--YAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
+ F K G A+ ++ M+ +G D + ++G L + G +EA + EM +
Sbjct: 299 NGFCKAGRLDLAERIRGDMVKSGVDC--NERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 482 LVMS 485
LV++
Sbjct: 357 LVVN 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN++I CK R+ + I M N ++ ++++ +EA + D M
Sbjct: 294 YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMT 353
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ G+ + +N ++ G++ A +++ + + + D T +V G CR G V+
Sbjct: 354 SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVK 413
Query: 399 GALMVLRRIEDDKVH---ALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
A+ R+I + K+ H+T +H KL Q + +++ + +LD SFG
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV---QGLSLDAISFG 470
Query: 456 LLASKLVKLGRFEEA 470
L +K G+ E A
Sbjct: 471 TLIDGYLKEGKLERA 485
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
N+ ++ ++ ++EA+ V+ +++ G++PDI N ++ Y G A K+
Sbjct: 281 NLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVF 340
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+E+ +L D T+ +++ C +GK + + I D L + +L + + F K+
Sbjct: 341 TSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTD--FDLVTGNL-LSNCFSKI 397
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEA----KVVLKE 476
GY + A+K + I + +D ALD ++ + S L + G A K+++KE
Sbjct: 398 GYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKE 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 5/251 (1%)
Query: 230 LLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDN-GFAR-MSAYNTLIARLC 287
L NK + C + T+ + L ++D+ L+++ + G A + N +I
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 288 KLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDIT 347
+L R +E+ + + + + +F IL+SL K + V + +G D+
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD---LVPRITHGIGTDFDLV 385
Query: 348 SFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRI 407
+ N L + G A K++ + ++ D TY + CR G A+ + + I
Sbjct: 386 TGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKII 445
Query: 408 EDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRF 467
+K H H II + ++LG Y AV LD S+ + LV+ R
Sbjct: 446 IKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRI 505
Query: 468 EEAKVVLKEMQ 478
EEA + +M+
Sbjct: 506 EEAYSLCCDMK 516
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 67/143 (46%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F YN++I CK DR+ ++ ++D MA ++ +F+ ++N K+++
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ M G+ + ++ L+ +C G+L AA ++ + + D T+ ++ G C
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 393 RAGKVEGALMVLRRIEDDKVHAL 415
++ A +L ++ + H L
Sbjct: 127 SKKELRKAFAILEDLQKSEDHHL 149
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 104/231 (45%), Gaps = 2/231 (0%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y+ ++N+ + + ++ ++ + D T+ + TN L +D + +
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMA 281
Query: 271 -NGFARMS-AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKME 328
+GF+ S YN L+ L K ++ +L ++ M ++ + +++ L+ +E
Sbjct: 282 RDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE 341
Query: 329 EAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALV 388
+ +D M G PD+ + ++T Y +G L A +M + + + + TY++++
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 389 LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
G C AG+ A +L+ +E + + ++S K G ++A K +
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 75/157 (47%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YNT+I C L R+ E+ I +++ +G N + +++ L M+ A + +M
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G P+ ++ L+ + + ++ + K+ + ++E+ + +Y ++ G C+ G+V+
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
A + + D K+ + +I + K+G +A
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 274 ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHV 333
A ++ N +I L K RI+++ + + G+ +I ++N ++ S ++++EA +
Sbjct: 599 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 658
Query: 334 IDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACR 393
+++K P+ + L+ C N ++ A +M + E+ ++ TY L+ +
Sbjct: 659 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Query: 394 AGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL--DT 451
+ +EG+ + +++ + ++ II K G +A + + DA L D
Sbjct: 719 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN--IFHQAIDAKLLPDV 776
Query: 452 ESFGLLASKLVKLGRFEEAKVVLKEM 477
++ +L K+GR EA ++ + M
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHM 802
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 8/173 (4%)
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
L++ F+ ++ + A V M G+SP++ ++ L+ C +G + A M
Sbjct: 354 LDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGM 413
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI----IS 424
+I + + TY +L+ G C+ G + + +D + + + I +
Sbjct: 414 YGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF----ALYEDMIKMGYPPDVVIYGVLVD 469
Query: 425 AFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
K G A++F + G+ L+ F L +L RF+EA V + M
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/300 (17%), Positives = 129/300 (43%), Gaps = 21/300 (7%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIA-------NTNNSLS 257
+RT+ Y+ L R + M NK + + +T+ + +L
Sbjct: 217 ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALR 276
Query: 258 ILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
+D+ D+ + +NT+I C+ ++ E+ + M + G ++ S+ +
Sbjct: 277 FFEDMKTRGISPDD-----ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTM 331
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+ + ++++ + + M++ G+ P+ T+++ LL C G ++ A ++K + + +
Sbjct: 332 IKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHI 391
Query: 378 GA-DSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAV 436
D+ + L++ +AG + A VL+ + V A + +I K Y +A+
Sbjct: 392 APKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAI 451
Query: 437 KFV-------MIYAGRDA-ALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
K + +I +D ++ ++ + L G+ +A+V+ +++ R + D L
Sbjct: 452 KLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDAL 511
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 206 RTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQT 265
R+V Y +++ G+ R F+ L+++ KF + NS ++L + +
Sbjct: 119 RSVREYHSMISILGKMRKFDTAWTLIDEMR-----------KFSPSLVNSQTLLIMIRKY 167
Query: 266 LARLDNGFA--------------RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNI 311
A D G A + + +L++ LC+ + ++ H++ +Y +
Sbjct: 168 CAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNKDKYPFDA 226
Query: 312 CSFNPILNS----LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASK 367
SFN +LN + S ++ E W M VGV D+ S++ +++ Y G+L K
Sbjct: 227 KSFNIVLNGWCNVIGSPREAERVWM---EMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 283
Query: 368 MMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDK 411
+ R+++E + D + Y+A+V +A V A +++ +E++K
Sbjct: 284 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 327
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 4/271 (1%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNT-FKFIANT--NNSLSILDDVTQTLA 267
Y+ L+ R R+F+ L +L + + S NT + + N L DV Q +
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160
Query: 268 RLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
+ A SAY TLI ++ L + M Y + F ++ ++
Sbjct: 161 KFKFRPA-FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
+ A ++D MK+ + DI +N + ++ G + A K IE L D TY ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDA 447
+ C+A +++ A+ + +E ++ + +I + G + +A + + +
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 448 ALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
++ + + L K+G+ +EA V +EM+
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/328 (18%), Positives = 130/328 (39%), Gaps = 20/328 (6%)
Query: 177 ISPNCRPILSITTRF----FATQSPNTNS-----------FPDKRTVAYYDDLVNAAGRE 221
I+ NC P L + + F P PD R+ Y L++ +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS---YSILIHGLIKA 565
Query: 222 RDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDN-GF-ARMSAY 279
N + L C T + + + ++ Q L + GF + Y
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 280 NTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
++I L K+DR+ E+ + + + LN+ ++ +++ +++EA+ +++ +
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 685
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G++P++ ++N LL A + A + ++E + + TY L+ G C+ K
Sbjct: 686 KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNK 745
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLAS 459
A + + ++ + ++ +IS K G A+A + D+ + +
Sbjct: 746 AFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 460 KLVKLGRFEEAKVVLKEMQGRRLVMSDK 487
L R +A + +E + R L + +K
Sbjct: 806 GLSNGNRAMDAFSLFEETRRRGLPIHNK 833
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/274 (17%), Positives = 100/274 (36%), Gaps = 36/274 (13%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y+ ++ G F+ + LL ++ S + I + +D+ + +
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 271 NGFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE 329
A +S YN LI LC+ K++
Sbjct: 371 KDAAPNLSTYNILIDMLCRAG-----------------------------------KLDT 395
Query: 330 AWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVL 389
A+ + D M+ G+ P++ + N ++ C + L A M + ++ + D T+ +L+
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 390 GACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAAL 449
G + G+V+ A V ++ D + +I F G K ++ +
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 450 DTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
D + + K G E+ + + +E++ RR V
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y ++I LCK +R+ E++ + + + + ++N ++ S K +EA+ +++ +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G P + ++N +LT G + A K+ + ++++ + TY+ L+ CRAGK++
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLD 394
Query: 399 GAL 401
A
Sbjct: 395 TAF 397
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
+I S+N ++ +L + + EA ++D ++ G+ PDI +FN LL + G ++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
++ E+ + D RTY+A +LG K + + + ++ + + +I +
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR-LVMSDKL 488
G +A + D +F LL + K G FE A + KE +R LV L
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358
Query: 489 RKYCNSDVK 497
++ + VK
Sbjct: 359 QQLVDELVK 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 35/204 (17%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS----------------- 320
+YNTLI LC+ D + E++ ++D + +I +FN +L S
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 321 ------------------LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL 362
L + K +E ++ +K G+ PD+ SFN ++ G +
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKM 301
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
A K I + D T+ L+ C+AG E A+ + + + +T +
Sbjct: 302 DEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQL 361
Query: 423 ISAFLKLGYYAQAVKFVMIYAGRD 446
+ +K +A + V I D
Sbjct: 362 VDELVKGSKREEAEEIVKIAKTND 385
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 81/174 (46%)
Query: 307 YGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAAS 366
+G +IC++N +++ L K ++A V D +K G PD +++ L+ C + + A
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 367 KMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAF 426
++ ++ D+ Y+ L+ G +A KV A + ++ + V A T+ +I
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
Query: 427 LKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
+ G + +D +F ++ +L + G+ E A +++EM+ R
Sbjct: 405 FRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 237 DNC-YNS-TNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKE 294
D C YNS + ++L + D++ + DN S Y LI CK R+ +
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN-----STYRILIQGCCKSYRMDD 342
Query: 295 SLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLT 354
++ I M + + +N +L+ +K+ EA + + M GV ++N L+
Sbjct: 343 AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILID 402
Query: 355 AYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHA 414
NG A + ++++ D+ T+ + L CR GK+EGA+ ++ +E
Sbjct: 403 GLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF-- 460
Query: 415 LHSTHLHIISAFLKLGYYAQA 435
S L IS+ L +G++ Q
Sbjct: 461 --SVDLVTISSLL-IGFHKQG 478
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 274 ARMSAYNTLIARLCKLDRIKESLHIVD-IMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
A ++ YN +I L K+ R + ++D + G Y L+I +N ++N+L +++EA
Sbjct: 663 ADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGY-LDIVMYNTLINALGKATRLDEATQ 721
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMK 370
+ D MK+ G++PD+ S+N ++ G L A K +K
Sbjct: 722 LFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLK 759
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Query: 261 DVTQTLARLDNGFARMSAYNTLIARL-----CKLDRIKESLHIVDIMACGQYGLNICSFN 315
++ + L LD + N +I L CK+D E+L L+ +N
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 316 PILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEE 375
++L+ ++EEA+ ++ MK G+ PD+ ++ L+ YC G ++ A ++ +
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 376 ELGADSRTYDALVLGACRAGKVEGALMVLRRIE 408
+ D TY+ LV G R G E L + R++
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 224 FNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLI 283
L +L K + NC + + + L L+ + R N F YN
Sbjct: 338 LGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF--RDMNIFLDRVCYNVAF 395
Query: 284 ARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVS 343
L KL R++E+ ++ M ++ ++ +++ + K+ +A +ID M G+S
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 344 PDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGA 400
PD+ ++N L++ NG+ ++ +R++ E ++ T ++ G C A KV+ A
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/150 (20%), Positives = 73/150 (48%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ +I CK ++++ + + + N+ F +++ +++ A + M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GV P++ +N L+ +C +GN++ A ++ +E L D TY L+ G C +V
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLK 428
A + ++++++++ +T+ +I + K
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 84/200 (42%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y LI LC D++ E+ + M + + ++N +++ ME+A + M
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GV P+I +F+ L+ YC ++ AA + + + + D TY AL+ + ++
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
AL + + + +H T ++ F K G + A+ F + + + F L
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
L + G A +M+
Sbjct: 557 EGLCQNGYILRASRFFSDMR 576
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%)
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
L KMEEA + ++MK GV P++ +++ ++ YC GN+ A + K I EL +
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM 440
+ LV G C+A ++ A + + V + +I K G +AV +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 441 IYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMS 485
+ + D ++ +L + L + EA + ++M+ R+ S
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVID 335
+ TL+ CK + + + M ++G+ N+ +N +++ M EA ++
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMV--KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M+++ +SPD+ ++ L+ C + A+++ ++++ E + S TY++L+ G C+
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 396 KVEGAL 401
+E AL
Sbjct: 424 NMEQAL 429
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 254 NSLSILDDVTQT---LARLDNG--FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYG 308
N L I D V + ++ N F + YN+LI CK ++++L + M
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVE 441
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
NI +F+ +++ + + ++ A + M G+ PD+ ++ L+ A+ N+ A ++
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLK 428
+ E + + T+ LV G + G++ A+ + + H +I +
Sbjct: 502 YSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Query: 429 LGYYAQAVKF 438
GY +A +F
Sbjct: 562 NGYILRASRF 571
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD V Y ++NA + + + N+ + NC S + F + N S L+D
Sbjct: 265 PD---VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 263 TQTLARL-DNGFA-RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
+ R +GF YN L+ C R++++ VD M G N +++ IL+
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
L ++ +EA+ V +T+ P ++++ ++ +C L A K+ ++ + +
Sbjct: 382 LIRMQRSKEAYEVY---QTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 381 SRTYDALVLGACRAGKVEGA 400
+ +L+ C K++ A
Sbjct: 439 MHMFSSLITALCHENKLDEA 458
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 6/220 (2%)
Query: 259 LDDVTQTLARLDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
+D+V + + D GF + AY +I CK + +E++ + M + F +
Sbjct: 251 VDEVNREMK--DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+N L S KK+ +A + K+ G + ++N L+ AYC++ + A K + + + +
Sbjct: 309 INGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGV 368
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
G ++RTYD ++ R + + A V + + ST+ ++ F A+K
Sbjct: 369 GPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIK 425
Query: 438 FVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
G+ F L + L + +EA EM
Sbjct: 426 IWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 78/194 (40%)
Query: 285 RLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSP 344
R + ++KE++ M + + FN +L++L+ + + +A V D MK P
Sbjct: 171 RYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEP 230
Query: 345 DITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
DI S+ LL + NL+ ++ + +++E D Y ++ C+A K E A+
Sbjct: 231 DIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFF 290
Query: 405 RRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKL 464
+E +I+ A++F L+ ++ L
Sbjct: 291 NEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWS 350
Query: 465 GRFEEAKVVLKEMQ 478
R E+A + EM+
Sbjct: 351 QRMEDAYKTVDEMR 364
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
S Y+ ++ LC +++ + + + M G ++ ++ +++S +E+A +
Sbjct: 443 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 502
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M+ VG +P++ ++ L+ AY + A+++ + + E + TY AL+ G C+AG+
Sbjct: 503 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 562
Query: 397 VEGALMVLRRI----------------EDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM 440
VE A + R+ +D+ T+ ++ F K +A K +
Sbjct: 563 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 622
Query: 441 IYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+ + + L L K+G+ +EA+ V EM
Sbjct: 623 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 659
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 96/220 (43%), Gaps = 2/220 (0%)
Query: 261 DVTQTLARLDNGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPIL 318
DV + D+ R + Y L+ CK R++E+ ++D M+ N ++ ++
Sbjct: 581 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 640
Query: 319 NSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELG 378
+ L K++EA V M G + +++ L+ Y ASK++ ++ E
Sbjct: 641 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 700
Query: 379 ADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
+ Y ++ G C+ GK + A +++ +E+ T+ +I F +G ++
Sbjct: 701 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 760
Query: 439 VMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ + A + ++ +L K G + A +L+EM+
Sbjct: 761 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 800
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 121/276 (43%), Gaps = 4/276 (1%)
Query: 204 DKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVT 263
++ V Y L++ + LL+ + + C + + + + + LD+
Sbjct: 594 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 653
Query: 264 QTLARL-DNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSL 321
+ + ++GF A + Y++LI R K+ R + ++ M N+ + +++ L
Sbjct: 654 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 713
Query: 322 TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADS 381
K +EA+ ++ MM+ G P++ ++ ++ + G + ++++R+ + + +
Sbjct: 714 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 773
Query: 382 RTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMI 441
TY L+ C+ G ++ A +L ++ + + +I F K + +++ +
Sbjct: 774 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDE 831
Query: 442 YAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
D A + LL L+K R E A +L+E+
Sbjct: 832 IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 867
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 115/295 (38%), Gaps = 15/295 (5%)
Query: 199 TNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIAN---TNNS 255
T+ P+ V Y L+ ++ +LN + CY S F + + T+
Sbjct: 290 TSCLPN---VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 346
Query: 256 LSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDI-------MACGQYG 308
S + + + + + YN LI +C D+ + ++D+ M
Sbjct: 347 HSYAYKLLKKMVKCGH-MPGYVVYNILIGSICG-DKDSLNCDLLDLAEKAYSEMLAAGVV 404
Query: 309 LNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM 368
LN + + L S K E+A+ VI M G PD ++++ +L C + A +
Sbjct: 405 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 464
Query: 369 MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLK 428
+ ++ L AD TY +V C+AG +E A + + T+ +I A+LK
Sbjct: 465 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 524
Query: 429 LGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ A + + ++ L K G+ E+A + + M G + V
Sbjct: 525 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV 579
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 10/227 (4%)
Query: 265 TLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSR 324
TL +N Y LI+ LC+ +E++ ++ M N+ +++ +L ++
Sbjct: 250 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNK 309
Query: 325 KKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTY 384
K++ V++MM G P FN L+ AYC +G+ A K++K++ + Y
Sbjct: 310 KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVY 369
Query: 385 DALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI----ISAFLKL----GYYAQAV 436
+ L+ C G + L + + + + + + +S+F + G Y +A
Sbjct: 370 NILIGSIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 427
Query: 437 KFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLV 483
+ G+ DT ++ + + L + E A ++ +EM+ LV
Sbjct: 428 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQT-LARL 269
Y+ ++N R + L + R +T TF + + + V + L
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK 726
Query: 270 DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE 329
+G + +YNT+IA K + M + +++ ++N +L++ K+ME+
Sbjct: 727 RHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEK 786
Query: 330 AWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVL 389
++ MK PD ++N ++ Y G + + ++K ++E LG D +Y+ L+
Sbjct: 787 FRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIK 846
Query: 390 GACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM 440
G VE A+ +++ + + T+ ++++A + + +A+K+ +
Sbjct: 847 AYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSL 897
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 66/129 (51%)
Query: 272 GFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAW 331
G SAY+++I +L ++ ++D+M + L + ++ +LN+ + + KME A
Sbjct: 275 GIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAE 334
Query: 332 HVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGA 391
++ M+ G SP+I ++N L+T Y + AA + R+ L D +Y +++ G
Sbjct: 335 SILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW 394
Query: 392 CRAGKVEGA 400
RA E A
Sbjct: 395 GRADNYEEA 403
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 4/253 (1%)
Query: 236 RDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKES 295
R + Y + K + N N+L + + +G Y T++ L + + E
Sbjct: 323 RMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHT----YTTMVGNLGRAKQFGEI 378
Query: 296 LHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTA 355
++D M N ++N +++S ++EA +V + M+ G PD ++ L+
Sbjct: 379 NKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDI 438
Query: 356 YCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHAL 415
+ G L A M +R++E L D+ TY ++ +AG + A + +
Sbjct: 439 HAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 416 HSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLK 475
T +I+ K Y A+K D ++ ++ L G EEA+ V
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 476 EMQGRRLVMSDKL 488
EMQ + V + +
Sbjct: 559 EMQRKNWVPDEPV 571
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 74/154 (48%)
Query: 331 WHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLG 390
++V + MK G P + +N ++ A NG A + + +E+ L +S T+ LV G
Sbjct: 213 YYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKG 272
Query: 391 ACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
C+AG++E L +L+R+ ++ + +I + G +++ + D
Sbjct: 273 LCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVM 484
++G L L K GR E + EM+G+++++
Sbjct: 333 VMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 212 DDLVNAAGRERDFNML-HYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTL---A 267
D ++ GR R F+ + L+ + +D S T + + L + ++
Sbjct: 112 DTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFK 171
Query: 268 RLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
RL F + +N L+ LC+ + ++ ++ + Q+ ++ +FN +L+ K
Sbjct: 172 RLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGW---KSS 227
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
EEA + MK G+ PD+ ++N L+ YC + + A K++ ++ EEE D TY +
Sbjct: 228 EEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTV 287
Query: 388 VLGACRAGKVEGALMVLRRIED 409
+ G G+ + A VL+ +++
Sbjct: 288 IGGLGLIGQPDKAREVLKEMKE 309
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDM 336
+N +I + +L ++++M YG+ N+ + N +++ ++ +AW V +
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLML--SYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 465
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M++ + PD T++N LL A C G+L A ++ + D TY LV G C G+
Sbjct: 466 MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQA 435
++ A +L RI+ + H L + + +L +A
Sbjct: 526 LKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLT--------SRKKM 327
+YNTLI LC ++ + ++L++ + M +YG+ N + N I+++L ++K +
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTM--NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLL 250
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
EE ++D + DI L+ + NGN++ A ++ K + ++ + ADS Y+ +
Sbjct: 251 EE---ILDSSQA-NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 388 VLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDA 447
+ G C +G + A + + V+ T+ +ISA K G + +A
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 448 ALDTESFGLLASKLVKLGRFEEA 470
A D S+ ++ L G A
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRA 389
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YNTLI+ LCK + E+ + M G + S+ I+ L + A + M
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+ P++ +N ++ Y G+ +A ++ + + + T +AL+ G + G++
Sbjct: 398 KSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLI 457
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A V + K+H +T+ ++ A LG+ A + R D ++ L
Sbjct: 458 DAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Query: 459 SKLVKLGRFEEAKVVLKEMQ 478
L GR ++A+ +L +Q
Sbjct: 518 RGLCWKGRLKKAESLLSRIQ 537
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 105/260 (40%), Gaps = 22/260 (8%)
Query: 237 DNCYNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESL 296
D+C+ + N + +L + +++Q N A YN +I LC + +
Sbjct: 273 DSCFKNGNVVQ-------ALEVWKEMSQK-----NVPADSVVYNVIIRGLCSSGNMVAAY 320
Query: 297 HIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAY 356
+ M ++ ++N ++++L K +EA + M+ GV+PD S+ ++
Sbjct: 321 GFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Query: 357 CYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALH 416
C +G++ A++ + + + L + ++ ++ G R G AL VL + V
Sbjct: 381 CIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNV 440
Query: 417 STHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKE 476
T+ +I ++K G A DT ++ LL LG A + E
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDE 500
Query: 477 MQGRRLVMSDKLRKYCNSDV 496
M LR+ C D+
Sbjct: 501 M----------LRRGCQPDI 510
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 131/330 (39%), Gaps = 42/330 (12%)
Query: 207 TVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTL 266
T + +++N GR + + ++ ++ + C + + + + L+ + + L
Sbjct: 82 TEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERL 141
Query: 267 ARLDN-GFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRK 325
+ +D G YN LI + ++L + D M + +F +++ L
Sbjct: 142 SSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDS 201
Query: 326 KMEEAWHVI-DMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKM---------------- 368
+++EA + DM+K GV P + + L+ A C G L A K+
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIY 261
Query: 369 -------------------MKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIED 409
++ + E+ D+ TY+ L+ G C E A VL + +
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 410 DKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEE 469
+ ++ I+ F ++ + +A R + DT S+ ++ L + +FEE
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 470 AKVVLKEM-----QGRRLVMSDKLRKYCNS 494
A V+L EM + RR + L+K C S
Sbjct: 382 AAVILDEMLFKGYKPRRDRLEGFLQKLCES 411
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
S++ +I+ D+ E ++ +M + + ++N + SL RKK +EA ++D
Sbjct: 223 SSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDG 282
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M + G+ P+ ++++L+ +C + A K+ K + DS Y L+ C+ G
Sbjct: 283 MLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGD 342
Query: 397 VEGALMVLR 405
E AL + +
Sbjct: 343 FETALSLCK 351
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 106/264 (40%), Gaps = 58/264 (21%)
Query: 225 NMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD--NGFARMSAYNTL 282
+++ Y++ ++ C+ + T + + N ++ D+ L + N A AYN +
Sbjct: 112 DLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLV 171
Query: 283 IARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGV 342
I +L K L+I D++ I M VG+
Sbjct: 172 I----RLFADKGDLNIADML-------------------------------IKEMDCVGL 196
Query: 343 SPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALM 402
PD+ ++ ++ YC G + A ++ K + + + +S TY ++ G C++G +E AL
Sbjct: 197 YPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALE 256
Query: 403 VLRRIEDDKVHALHS----THLHIISAFLKLGYYAQAV-----------------KFVMI 441
+L +E + L S T+ +I AF + +A+ V+I
Sbjct: 257 LLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Query: 442 YAGRDAALDTESFGLLASKLVKLG 465
+ D ++ L KLVKLG
Sbjct: 317 QGVLENDEDVKALSKLIDKLVKLG 340
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 269 LDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
+D+G + A+N ++ L + + +++ + +M N+ S+ ++ + M
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
E A D M G+ PD + L+T + L +++K ++E+ D +TY+AL
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 388 V-LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGY-YAQAVKFVMIYAGR 445
+ L A + G + + I+++ ++H+ ++ + S F+ Y +AV MI G
Sbjct: 444 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG- 502
Query: 446 DAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
D S+ +L L+ G+ EA L+EM
Sbjct: 503 -ICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 96/210 (45%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
+ +LI CK +R+ +L + M + L++ ++ +++ + M+ A+ + +
Sbjct: 628 FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G+ P+++ +N L++ + G + AA + K++ + + D TY ++ G + G +
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN 747
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A + + D + H+ +++ K G + +A K + +D + + +
Sbjct: 748 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
+ + G EA + EM + +V D +
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
S++ +++ + + ++ + D MK G++P I +N L+ A K+MK++
Sbjct: 296 SYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKL 355
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
EE L DS TY++++ C AGK++ A VL + + + S + AFL+ +
Sbjct: 356 NEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL----SPTVDTFHAFLEAVNF 411
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
+ ++ + D E+F L+ KL K + E A + EM +V + L
Sbjct: 412 EKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPAL 467
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 269 LDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
+D+G + A+N ++ L + + +++ + +M N+ S+ ++ + M
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
E A D M G+ PD + L+T + L +++K ++E+ D +TY+AL
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 388 V-LGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGY-YAQAVKFVMIYAGR 445
+ L A + G + + I+++ ++H+ ++ + S F+ Y +AV MI G
Sbjct: 445 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG- 503
Query: 446 DAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
D S+ +L L+ G+ EA L+EM
Sbjct: 504 -ICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 261 DVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNS 320
DV Q + R D YN +I K + S + M Q NIC++ ++N+
Sbjct: 250 DVFQRMKR-DRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNA 308
Query: 321 LTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGAD 380
E+A + + ++ G+ PD+ +N L+ +Y G A+++ ++ D
Sbjct: 309 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 368
Query: 381 SRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVM 440
+Y+ +V RAG A V ++ + +H+ ++SA+ K + V
Sbjct: 369 RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVK 428
Query: 441 IYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+ DT + + +LG+F + + +L EM+
Sbjct: 429 EMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 466
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 114/255 (44%), Gaps = 12/255 (4%)
Query: 240 YNSTNTFKFIANTNNSLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIV 299
YNS F N L+ L ++ Q L + + + Y ++ LCK + + I+
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPD----VDTYLIVVNELCKKNDRDAAFAII 570
Query: 300 DIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYC 357
D M + GL + ++ I+ SL + ++ EA M G+ PD ++ ++ Y
Sbjct: 571 DAME--ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 358 YNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHS 417
NG + A+++++ + + L S TY L+ G + G +E L ++ +D +
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVV 688
Query: 418 THLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVK-LGRFEEAKVVL-- 474
+ +I FLK G + + + D D ++ L S L + + R ++ +V++
Sbjct: 689 LYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748
Query: 475 -KEMQGRRLVMSDKL 488
KE +RL+ + L
Sbjct: 749 GKEKLLQRLIRTKPL 763
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 65/134 (48%)
Query: 273 FARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWH 332
F+ + +Y+ +I+ LCK R++ES + M ++ +N ++ + + + A
Sbjct: 394 FSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKK 453
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
+ D M G ++T++N L+ G + ++ ++ E + D Y +L+ G C
Sbjct: 454 LWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC 513
Query: 393 RAGKVEGALMVLRR 406
+ K+E A+ V R+
Sbjct: 514 KETKIEAAMEVFRK 527
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+S YN LI CK + I+ + + D M +N+ ++N ++ L+ + EE+ + D
Sbjct: 432 VSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFD 491
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKR-IEEEELGADSRTYDALVLGACRA 394
M G+ PD T + L+ C + AA ++ ++ +E + R VL C
Sbjct: 492 KMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSN 551
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHII 423
G A +LR E L T H++
Sbjct: 552 GHSGEASQLLREREH-----LEHTGAHVV 575
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%), Gaps = 2/201 (0%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
AY+ +I K+ + K +++ M + LN+ +F ++ +K++EA + ++M
Sbjct: 100 AYHMMIESTAKIRQYKLMWDLINAMR-KKKMLNVETFCIVMRKYARAQKVDEAIYAFNVM 158
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
+ + P++ +FN LL+A C + N+ A ++ + + + DS+TY L+ G + +
Sbjct: 159 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNL 217
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLL 457
A V R + D H T+ ++ K G +A+ V T + +L
Sbjct: 218 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 277
Query: 458 ASKLVKLGRFEEAKVVLKEMQ 478
R EEA EM+
Sbjct: 278 VHTYGTENRLEEAVDTFLEME 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 93/212 (43%), Gaps = 1/212 (0%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVID 335
+ + ++ + + ++ E+++ ++M N+ +FN +L++L K + +A V +
Sbjct: 132 VETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE 191
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
M+ +PD +++ LL + NL A ++ + + + D TY +V C+AG
Sbjct: 192 NMRD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAG 250
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+V+ AL ++R ++ + ++ + +AV + D F
Sbjct: 251 RVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFN 310
Query: 456 LLASKLVKLGRFEEAKVVLKEMQGRRLVMSDK 487
L K R + VLKEM+ + + + K
Sbjct: 311 SLIGAFCKANRMKNVYRVLKEMKSKGVTPNSK 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 10/209 (4%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDN--CYNSTNTFKFIANTNNSLSILD 260
PD T + D++ AGR + L R+ D C +T + + +T + + L+
Sbjct: 234 PDIVTYSIMVDILCKAGR-----VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 288
Query: 261 DVTQTLARLD-NGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPIL 318
+ T ++ +G A ++ +N+LI CK +R+K ++ M N S N IL
Sbjct: 289 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 348
Query: 319 NSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELG 378
L R + +EA+ V M V PD ++ ++ +C + A K+ K + ++ +
Sbjct: 349 RHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 407
Query: 379 ADSRTYDALVLGACRAGKVEGALMVLRRI 407
T+ L+ G C + A ++L +
Sbjct: 408 PSMHTFSVLINGLCEERTTQKACVLLEEM 436
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 88/199 (44%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y+ +I LC+ +I + + M N +FN ++ + E+ V + MK
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 352
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
+G PD ++N+L+ A+C + NL A K++ + +++ ++ T++ + + V
Sbjct: 353 KLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVN 412
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
GA + ++ + K T+ ++ F+ +K ++ + ++ LL
Sbjct: 413 GAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLV 472
Query: 459 SKLVKLGRFEEAKVVLKEM 477
+ +G + A + KEM
Sbjct: 473 TMFCGMGHWNNAYKLFKEM 491
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/256 (16%), Positives = 109/256 (42%), Gaps = 3/256 (1%)
Query: 204 DKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVT 263
D ++ Y+++++ +G+ R F++ +L++ N S TF + + +
Sbjct: 147 DHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAV 206
Query: 264 QTLARLDN--GFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSL 321
R+++ A++ +I+ L + R E+ D + ++ ++ + ++
Sbjct: 207 HCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGW 265
Query: 322 TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADS 381
++ EA V MK G+ P++ +++ ++ A C G + A + + + ++
Sbjct: 266 CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNA 325
Query: 382 RTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMI 441
T++ L+ +AG+ E L V +++ T+ +I A + AVK +
Sbjct: 326 ITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNT 385
Query: 442 YAGRDAALDTESFGLL 457
+ ++ +F +
Sbjct: 386 MIKKKCEVNASTFNTI 401
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y T++ L + + ++D M N ++N +++S + EA +V + M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PD ++ L+ + G L A M +R++ L D+ TY ++ +AG +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A + + D T+ ++ K Y A+K D ++ ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
L G EEA+ V EMQ + + + +
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 86/210 (40%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y T++ L + + ++D M N ++N +++S + EA +V + M+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PD ++ L+ + G L A M +R++ L D+ TY ++ +AG +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A + + D T+ ++ K Y A+K D ++ ++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
L G EEA+ V EMQ + + + +
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 98/262 (37%), Gaps = 48/262 (18%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
P + +Y L+ + G+ FN + + S +F + N D V
Sbjct: 97 PKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKV 156
Query: 263 TQTLARLDNGFARMS----AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPIL 318
Q + + ++ +Y LI C ++++ I+ M + +F IL
Sbjct: 157 PQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTIL 216
Query: 319 NSLTSRKKMEEA---WH-------------------------------VIDMMKTVGVSP 344
+SL + ++E A W+ +I+ M ++G+ P
Sbjct: 217 SSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKP 276
Query: 345 DITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVL 404
D S+NYL+TAYC G L A K+ + +E ++ T+ L+ C + E +
Sbjct: 277 DTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIF 336
Query: 405 RRIEDDKVHALHSTHLHIISAF 426
++ S ++H I F
Sbjct: 337 KK----------SVYMHKIPDF 348
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 83/205 (40%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y L+ C ++KE+ +D M+ + + ++ L + +E A ++ M
Sbjct: 220 YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMT 279
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
G PDI +FN L+ A +G + +M + L D TY L+ + GK++
Sbjct: 280 KGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKID 339
Query: 399 GALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLA 458
A +L +D S + II + G + A F + + + +L
Sbjct: 340 EAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI 399
Query: 459 SKLVKLGRFEEAKVVLKEMQGRRLV 483
+ + G+F +A L EM LV
Sbjct: 400 TMCGRGGKFVDAANYLVEMTEMGLV 424
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 269 LDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKM 327
+D G + A+N ++ L + + +++ + +M N+ S+ ++ + M
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 328 EEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDAL 387
E A D M G+ PD + L+T + L +++K ++E+ D +TY+AL
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 388 VLGACRAGKVEGALMVLRR-IEDDKVHALHSTHLHIISAFLKLGY-YAQAVKFVMIYAGR 445
+ E A + + I+++ ++H+ ++ + S F+ Y +AV MI G
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG- 503
Query: 446 DAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
D S+ +L L+ G+ EA L+EM
Sbjct: 504 -ICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Query: 271 NGFAR---MSAYNTLIARLCKLDRIKES-LHIVDIMACGQYGLNICSFNPILNSLTSRKK 326
+G AR + ++ +I LC++ +K++ ++D+++ G N FN ++++ +
Sbjct: 865 SGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV-FNLVVHACSKTGD 923
Query: 327 MEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDA 386
++EA V+ +M++ G+ PD+ ++ +++ Y G + A +++ +++ TY A
Sbjct: 924 LDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHA 983
Query: 387 LVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAF 426
L+ G C+ + + AL +L ++ V + +I +F
Sbjct: 984 LIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 1023
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 281 TLIARLCKLD-RIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKT 339
TLI LCK D I + ++ ++ I F+ +++SL + +++A ++ M +
Sbjct: 842 TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMIS 901
Query: 340 VGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEG 399
G +P FN ++ A G+L A +++K +E L D TY ++ G + G ++
Sbjct: 902 KGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDE 961
Query: 400 ALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV--MIYAGRDAALDTESFGLL 457
A +L + T+ +I + K+ Y +A+K + M G D E L+
Sbjct: 962 AQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD-EYNKLI 1020
Query: 458 ASKLVKLGRFEEAKVVLKEMQGRRL 482
S +K +E+A+V+ +EM+ + L
Sbjct: 1021 QSFCLKALDWEKAEVLFEEMKQKGL 1045
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 203 PDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDV 262
PD T Y ++N R + + L R + T+ + N++ L D+
Sbjct: 633 PDLFT---YTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL----DM 685
Query: 263 TQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLT 322
+ + D + Y +I R C L+ +K+ + M + ++ ++ +L +
Sbjct: 686 KREMEAFDV-IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKP 744
Query: 323 SRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSR 382
R E MK V PD+ + L+ C G+L A ++ ++ E + D+
Sbjct: 745 ERNLSRE-------MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAA 797
Query: 383 TYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
Y AL+ C+ G ++ A M+ R+ + V + +I+ + G+ +AVK V
Sbjct: 798 PYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLV 854
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 8/235 (3%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y+ L+ A R D L+ K +D + + + + + +D V L RL
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVM--LLRLY 257
Query: 271 NGFAR------MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSR 324
R + N +I K ++L ++ + + I+++L
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 325 KKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTY 384
+ EA + + ++ G+ P ++N LL Y G L A M+ +E+ + D TY
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 385 DALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFV 439
L+ AG+ E A +VL+ +E V +++ F G + + + +
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVL 432
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
YN LI + + I+++L+++ M Y + +++ ++ SLT K++ ++ + K
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV-MLLRLYK 258
Query: 339 TV---GVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAG 395
+ + D+ N ++ + +G+ A +++ + L A + T +++ +G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 396 KVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFG 455
+ A + + + + ++ ++K G A V R + D ++
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 456 LLASKLVKLGRFEEAKVVLKEMQG 479
LL V GR+E A++VLKEM+
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEA 402
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 12/239 (5%)
Query: 246 FKFIANTNNSLSILDDVTQTLAR-LDNGF-ARMSAYNTLIARLCKLDRIKESLHIVD--- 300
+ + +T + LD T R L G +NTLI CK R HIV
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR-----HIVAEEM 501
Query: 301 IMACGQYGLNIC--SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCY 358
A + G C ++N ++NS +++ ++ ++ MK+ G+ P++ + L+ Y
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 359 NGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHST 418
+G A + ++ ++ L S Y+AL+ + G E A+ R + D +
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 419 HLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+I+AF + A+A + D ++ L L+++ +F++ VV +EM
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 109/262 (41%), Gaps = 15/262 (5%)
Query: 231 LNKRARDNCYNSTNTFKF-------IANTNNSLSILDDVTQTLARLDNGFARMSAYNTLI 283
L +R R NTF + + ++ +L+++ + + +N F +A +T
Sbjct: 154 LLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPEN-FTYCAAIDTF- 211
Query: 284 ARLCKLDRIKESLHIVDIMACGQYGLNICS---FNPILNSLTSRKKMEEAWHVIDMMKTV 340
C+ + E+ + D M ++ + F ++ +L K EE + +I M +
Sbjct: 212 ---CQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIST 268
Query: 341 GVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGA 400
G PD++++ ++ C + A K + + + D TY+ + C K + A
Sbjct: 269 GCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEA 328
Query: 401 LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASK 460
L + R+ + + T+ +IS F ++ A RD D E++ + +
Sbjct: 329 LKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING 388
Query: 461 LVKLGRFEEAKVVLKEMQGRRL 482
L R +EA +L+E+ + L
Sbjct: 389 LFDCHRAKEACFLLEEVVNKGL 410
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 261 DVTQTLARLDNGFAR------MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSF 314
D+ +T R+ +GF + Y L+ L R E + M ++ S+
Sbjct: 370 DLVET-CRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSY 428
Query: 315 NPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEE 374
N +++ L +++E A + M+ G+SP++ +FN L+ Y G++ +++++
Sbjct: 429 NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLV 488
Query: 375 EELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQ 434
D T+ ++ CRA +++ A + + + + T+ +I + G +
Sbjct: 489 HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDR 548
Query: 435 AVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEM 477
+VK + D ++ K+ + ++A+ +LK M
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Query: 259 LDDVTQTLARLDNGF-ARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPI 317
LDDV GF M A I L K + + L + + + ++ +++ +
Sbjct: 567 LDDVA------GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 620
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
+ +L + EA + + M + G+ P + ++N ++ +C G + + R+ E+E
Sbjct: 621 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 680
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
D TY +L+ G C +G+ A+ ++ + T + +I K G+ +A+
Sbjct: 681 NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALV 740
Query: 438 F 438
+
Sbjct: 741 Y 741
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 277 SAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDM 336
S +NTLI K R+ ++ ++ M ++ +FN ++++ + + EA ++
Sbjct: 306 STFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKK 365
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
M+ G+SPD ++N LL+ + G++ AA + ++I + L D+ T+ A++ C+
Sbjct: 366 MEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 397 VEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGL 456
V V+ ++ + + + I+ ++ G QA K + D L + +
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQA-KALFERFQLDCVLSSTTLAA 484
Query: 457 LASKLVKLGRFEEAKVVL---KEMQGRR 481
+ + G + EA+ V + M G+R
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQR 512
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 72/167 (43%)
Query: 312 CSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKR 371
C++N + L ++EA ++ M G P ++ ++ +Y G L A + +
Sbjct: 551 CTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEA 610
Query: 372 IEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGY 431
+E+ + + Y +L+ G +G VE A+ R +E+ V + H +I A+ K+G
Sbjct: 611 MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGC 670
Query: 432 YAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+A + + D + + S LG EA+ + ++
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR 717
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMM 337
+YN +I+ KL ++E ++ M +G + S++ ++ L ++ ++ + D +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 338 KTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKV 397
K G PD +N ++ + + + + +R+ +EE + TY LV G + KV
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 398 EGALMVLRRIEDDKVHALHSTHLHIISAFLK-LGYYAQAVKFVMIYA-GRDAA--LDTES 453
AL + + V L +T L +++FLK L Y ++IY R A + +
Sbjct: 377 SDALEIFEEMLSRGV--LPTTGL--VTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESA 432
Query: 454 FGLLASKLVKLGRFEEAKVVLKEMQ 478
+ LL +L + G+ V EMQ
Sbjct: 433 YKLLLKRLSRFGKCGMLLNVWDEMQ 457
>AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8034036-8035292 REVERSE
Length = 418
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 38/163 (23%)
Query: 278 AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEA---W--- 331
+Y LI C + ++++ I+ M + I +F IL SL ++EA W
Sbjct: 176 SYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEM 235
Query: 332 ----------------------------HVIDMMKTVGVSPDITSFNYLLTAYCYNGNLM 363
+++ M +VG+ PD S+NYL+TAYC G +
Sbjct: 236 VNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMS 295
Query: 364 AASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRR 406
A K+ + +E+ ++ T+ L+ C G + L V ++
Sbjct: 296 EAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKK 334
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 8/231 (3%)
Query: 255 SLSILDDVTQTLARLDNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSF 314
+L+ ++V L FAR + + LI L + I+ +++ M + N C+
Sbjct: 87 ALNRWEEVDGVLNSWVGRFARKN-FPVLIRELSRRGCIELCVNVFKWMKIQK---NYCAR 142
Query: 315 NPILNSL----TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMK 370
N I N + +++A + M+ PD +++ L+ A+ G A +M
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 371 RIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLG 430
+ + TY+ L+ +G AL V +++ D+ V TH ++SA+
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 431 YYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
Y++A+ + + G DT +F ++ L KLG+ +A + M+ +R
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 79/169 (46%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ S+ +LNS ++ +A V MM+ P++ ++N L+ AY NG L A ++
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+++E++ + + + L+ R+ K VL + ++ + + I +++
Sbjct: 449 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+A+ + D+ +F +L S ++ ++ EA LKEM+
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
Query: 275 RMSAYNTLIARLCKLDRIKESLHIVDIMA-CGQYGLNICSFNPILNSLTSRKKMEEAWHV 333
+ +A+ L+ +C+ + I + M+ C + ++ +++SL ++ A +
Sbjct: 271 KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF-AYGHMIDSLCRYRRNHGAARI 329
Query: 334 IDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACR 393
+ +MK+ G+ P TS+N ++ C +G M A ++++ E E TY L+ C+
Sbjct: 330 VYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCK 389
Query: 394 ---AGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALD 450
GK L ++ R E +++ +L + + + ++ D D
Sbjct: 390 ELDTGKARNVLELMLRKEGADRTRIYNIYLR---GLCVMDNPTEILNVLVSMLQGDCRPD 446
Query: 451 TESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKL 488
+ + + L K+GR ++A VL +M + D +
Sbjct: 447 EYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAV 484
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 45/248 (18%)
Query: 272 GFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAW 331
G R YN + LC +D E L+++ M G + + N ++N L ++++A
Sbjct: 408 GADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAM 467
Query: 332 HVI-DMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI------------------ 372
V+ DMM +PD + N ++ G A ++ R+
Sbjct: 468 KVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIR 527
Query: 373 ------------------EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHA 414
E+ + ADS TY ++ G C KV+ A ++ DD +
Sbjct: 528 GLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMA----KKFWDDVIWP 583
Query: 415 LHSTHLHIISAFLK----LGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEA 470
+ +AFLK GY + A F+ A A + + + ++ + G EA
Sbjct: 584 SGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREA 643
Query: 471 KVVLKEMQ 478
+L+EM+
Sbjct: 644 YQILEEMR 651
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 282 LIARLCKLDRIKESLHIVDIMACGQYGLNICSFN-PILNSLTSRKKMEEAWHVIDMMKTV 340
+I LCK R+KE + ++D + CG+ L N ++ + ++EE+ ++ +
Sbjct: 240 MIQVLCKEGRLKEVVDLLDRI-CGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMK 298
Query: 341 GVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGA 400
+ D ++ ++ A G+L++A K+ + + A+S Y V C G V+ A
Sbjct: 299 NMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEA 358
Query: 401 LMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASK 460
+L +E+ V T +I F + G+ + +++ + R +F +
Sbjct: 359 ERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS 418
Query: 461 LVKLGRFEEAKVVL 474
+ K+ A +L
Sbjct: 419 VSKIENVNRANEIL 432
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 276 MSAYNTLIARLCKLD-RIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVI 334
+ +N+++ L K D I +MA G +G ++ ++ ++ L+ ++ + + ++
Sbjct: 147 LKVFNSILDVLVKEDIDIAREFFTRKMMASGIHG-DVYTYGILMKGLSLTNRIGDGFKLL 205
Query: 335 DMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
+MKT GV+P+ +N LL A C NG + A +M ++E + T++ L+ C
Sbjct: 206 QIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNE 261
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF 454
K+ ++++L + T ++ G ++A++ + + +D +
Sbjct: 262 QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVAC 321
Query: 455 GLLASKLVKLGRFEEAKVVLKEMQ 478
L LG+ A+ EM+
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEME 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGL--NICSFNPILNSLTSRKKMEEAWHVIDM 336
+N LI+ C ++ +S+ +++ C G ++ + ++ L + ++ EA V++
Sbjct: 251 FNILISAYCNEQKLIQSMVLLE--KCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLER 308
Query: 337 MKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGK 396
+++ G D+ + N L+ YC G + A + +E + + TY+ L+ G C G
Sbjct: 309 VESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM 368
Query: 397 VEGALMVLRRIEDDKV 412
++ AL ++ D +
Sbjct: 369 LDSALDTFNDMKTDAI 384
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 286 LCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPD 345
LC R+ E+L +++ + +++ + N ++ + KM A M+ G P+
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 346 ITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLR 405
+ ++N L+ YC G L +A ++ + + + T++ L+ G G+ + L +L
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412
Query: 406 RIED-DKVHALH-STHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVK 463
++D D VH + +I F K + A++F++ SF L++ L +
Sbjct: 413 MMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLIS--LCE 470
Query: 464 LGRFEEAKVVLKEMQGRRLVMS 485
G ++ K +M G V S
Sbjct: 471 KGGMDDLKTAYDQMIGEGGVPS 492
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 205 KRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQ 264
K V Y++L++ G+ N + L+++ T+ + ++ +D+ +
Sbjct: 475 KLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE 534
Query: 265 TLARL-DNGFARMS-AYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLT 322
++ L GF + A+ +I K +E+ + MA + ++ + + +L+
Sbjct: 535 IISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYC 594
Query: 323 SRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSR 382
++ME+A + + + G+ PD+ +N L+ YC G++ A +++ + + + +
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 383 TYDALVLG 390
T+ ALVLG
Sbjct: 655 THHALVLG 662
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 112/277 (40%), Gaps = 23/277 (8%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNK-RARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARL 269
Y LV+A R F+ LL + ++ NC +T+ + + + D V L+ +
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 270 ------DNGFARMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTS 323
N + +TLI L + D +S + N L +
Sbjct: 248 RRQGIRPNTITFVEMESTLIQMLGEDDCKPDSW----------------TMNSTLRAFGG 291
Query: 324 RKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRT 383
++E + + ++ G+ P+I +FN LL +Y +GN S +M+ +++ T
Sbjct: 292 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 351
Query: 384 YDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYA 443
Y+ ++ RAG ++ + R ++ +++ T ++ A+ + + +
Sbjct: 352 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE 411
Query: 444 GRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGR 480
D LD F L ++ +F E K VL+ M+ +
Sbjct: 412 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKK 448
>AT4G02820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1258581-1260265 FORWARD
Length = 532
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 305 GQYG-LNIC-SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL 362
G+ G L C +N +L+ SR + E+ +I +K + SPDI ++N LTA+ ++
Sbjct: 189 GECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLTAFASGNDV 247
Query: 363 MAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHI 422
A K+ + +EE+L D TY L + VE A + L+ +E + +
Sbjct: 248 EGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASL 307
Query: 423 ISAFLKLG-YYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
IS LG + + + + D E ++ S +VKLG FE+AK + E +
Sbjct: 308 ISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMI-SAVVKLGEFEQAKGLYDEWE 363
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 113/271 (41%), Gaps = 24/271 (8%)
Query: 190 RFFATQSPN-TNSFPDKRTVAYYDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKF 248
RFF+ + +S DK ++ ++ ++D + LL+ ++N TF
Sbjct: 88 RFFSWSCKSLGSSLHDKE----FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI 143
Query: 249 IANTNNSLSILDDVTQTLARLDNGFARMSAYNT--LIARLCKLDRIKESL----HIVDIM 302
+A T + +D LD + +I+ LC +K +L H D++
Sbjct: 144 VAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVI 203
Query: 303 ACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCY---- 358
+ G + + +L + ++ ++EA VI MK+ G++PD+ FN LLT C
Sbjct: 204 S----GNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVN 259
Query: 359 ---NGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHAL 415
+G + A +M + ++ S +Y+ L+ R +V + +L +++
Sbjct: 260 RNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPD 319
Query: 416 HSTHLHIISAFLKLGYYAQAVKFV--MIYAG 444
++ ++ G + + + V MI G
Sbjct: 320 TGSYYFVVRVLYLTGRFGKGNQIVDEMIERG 350
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 62/123 (50%)
Query: 279 YNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMK 338
Y++LI LC +R+ E++ ++D+M N+ +++ + N ++++ ++D M
Sbjct: 156 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 215
Query: 339 TVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVE 398
GV+ + S N L+ Y G + A + + L + R+Y+ ++ G G+VE
Sbjct: 216 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 275
Query: 399 GAL 401
AL
Sbjct: 276 KAL 278
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 63/121 (52%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
+I + + ++N +++A +V M+ +G+ D+ L+ C N ++ A +++
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
KR+++ + + TY +L+ G C++G++ A L ++ K++ T +I A+ K
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 430 G 430
G
Sbjct: 132 G 132
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 85/202 (42%)
Query: 282 LIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVG 341
LI LCK + +L ++ M N+ +++ ++ L ++ +A + M +
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 342 VSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRAGKVEGAL 401
++P++ +F+ L+ AY G L + K + + + + TY +L+ G C +V+ A+
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 173
Query: 402 MVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKL 461
+L + T+ + + F K +K + R A +T S L
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Query: 462 VKLGRFEEAKVVLKEMQGRRLV 483
+ G+ + A V M L+
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLI 255
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 310 NICSFNPILNSL----TSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAA 365
N C+ N I N + +++A + M+ PD +++ L+ A+ G A
Sbjct: 6 NYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWA 65
Query: 366 SKMMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISA 425
+M + + TY+ L+ +G AL V +++ D+ V TH ++SA
Sbjct: 66 MNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA 125
Query: 426 FLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRR 481
+ Y++A+ + + G DT +F ++ L KLG+ +A + M+ +R
Sbjct: 126 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 79/169 (46%)
Query: 310 NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMM 369
++ S+ +LNS ++ +A V MM+ P++ ++N L+ AY NG L A ++
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 370 KRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKL 429
+++E++ + + + L+ R+ K VL + ++ + + I +++
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 376
Query: 430 GYYAQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
+A+ + D+ +F +L S ++ ++ EA LKEM+
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 425
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 308 GLNICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASK 367
G++ N +NSL + +E A ++ +GV PD+ ++N L+ Y + A
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 368 MMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIE--DDKVHALHSTHL----H 421
+ +R+ E + D TY++L+ GA + LM+ R ++ D+ +H+ S +
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAK------NLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 422 IISAFLKLGYYAQAVKFV---MIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQ 478
++S + KLG + +A K + + AG +DT + +L L K G + A + K ++
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDT--YNILLDALCKSGHTDNAIELFKHLK 181
Query: 479 GR 480
R
Sbjct: 182 SR 183
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 276 MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEEAWHVI- 334
++ YN+LI+ K + L + D M ++ S+N +++ + EA+ ++
Sbjct: 83 VTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILH 142
Query: 335 DMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGACRA 394
+ + G+ P I ++N LL A C +G+ A ++ K + + + + TY+ L+ G C++
Sbjct: 143 EDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKS 201
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESF 454
+V ++R ++ T+ ++ + K + ++ + D +
Sbjct: 202 RRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN 261
Query: 455 GLLASKLVKLGRFEEAKVVLKEM 477
+ S L+K GR EEA + E+
Sbjct: 262 CAVVSALIKTGRAEEAYECMHEL 284
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLARLD 270
Y+ + +A G+ + + +H L K +D T+ + + + +D+ L+
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 271 NGFAR--MSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLN--ICSFNPILNSLTSRKK 326
+ + +YN+LI L K + E+ H V + GLN + +++ ++ ++
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEA-H-VRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 327 MEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDA 386
+E A+ + + M G P+I ++N LL NG A + +++++ L DS TY
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTV 622
Query: 387 L 387
L
Sbjct: 623 L 623
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 119/279 (42%), Gaps = 28/279 (10%)
Query: 211 YDDLVNAAGRERDFNMLHYLLNKRARDNCYNSTNTFK-----FIANTN--NSLSILDDVT 263
Y+ ++N G+ + F L+ + +T ++ ++ N +LS+ ++
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 264 QTLARLDNGFARMSAYNTLIARLCKLDRIKE------SLHIVDIMACGQYGLNICSFNPI 317
+ LD ++ N +I +LD +KE SL +DI N+ S+N I
Sbjct: 323 EVNCALD-----LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP------NVVSYNTI 371
Query: 318 LNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEEL 377
L + EA H+ +M+ + ++ ++N ++ Y A+ +++ ++ +
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
++ TY ++ +AGK++ A + +++ V + +I A+ ++G A +
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 438 FVMIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKE 476
+ D + +LA K GR EEA V ++
Sbjct: 492 LLHELKLPDNIPRETAITILA----KAGRTEEATWVFRQ 526
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 319 NSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEE-EEL 377
NS + ME + M G+ PD+ + N L+ Y + ++ A ++ ++ +
Sbjct: 261 NSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDC 320
Query: 378 GADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVK 437
+S TYD L+ G C G+ A +L ++ ++ +++AF G AVK
Sbjct: 321 EPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVK 380
Query: 438 FV--MIYAGRDAALDTESFGLLASKLVKLGRFEEAKVVLKEMQGRRLVMSDKLRKYCN 493
+ MI GR +D S+ L + + G+++EA +L+ ++ ++LV D K N
Sbjct: 381 CLWEMIENGR--VVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVN 436
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 107/278 (38%), Gaps = 37/278 (13%)
Query: 230 LLNKRARDNCYNSTNTFKFIANTNNSLSILDDVTQTLAR-LDNGFA-RMSAYNTLIARLC 287
+L A + CY T+ + N N L++V + L +G YNTL+ LC
Sbjct: 266 VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 288 KLDRIKESLHIVDIMACGQY------------GL-----------------------NIC 312
+ E I++IM Y GL +I
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIV 385
Query: 313 SFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI 372
++N +L +++ +++A ++ ++K P + ++N ++ G + A ++ ++
Sbjct: 386 TYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQM 445
Query: 373 EEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYY 432
+ + D T +L+ G CRA VE A VL+ + ST+ +I K
Sbjct: 446 LDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEI 505
Query: 433 AQAVKFVMIYAGRDAALDTESFGLLASKLVKLGRFEEA 470
A++ V I D + + + ++G EA
Sbjct: 506 EMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 275 RMSAYNTLIARLCKLDRIKESLHIVDIMACGQYGLNICSFNPILNSLTSRKKMEE--AWH 332
R+ YN ++ + + ++ +VD M ++ SFN ++N+ + A
Sbjct: 224 RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 333 VIDMMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRIEEEELGADSRTYDALVLGAC 392
++DM++ G+ PD ++N LL+A + NL A K+ + +E D TY+A++
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 393 RAG 395
R G
Sbjct: 344 RCG 346
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 11/167 (6%)
Query: 306 QYGL--NICSFNPILNSLTSRKKMEEAWHVIDMMKTVGVSPDITSFNYLLTAYCYNGNL- 362
Q GL N ++ ++ L + A + M + GV PDI ++N LL C NG L
Sbjct: 9 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLE 68
Query: 363 --MAASK------MMKRIEEEELGADSRTYDALVLGACRAGKVEGALMVLRRIEDDKVHA 414
+ A K + + + + + TY ++ G C+ G E A + R++++D
Sbjct: 69 KALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLP 128
Query: 415 LHSTHLHIISAFLKLGYYAQAVKFVMIYAGRDAALDTESFGLLASKL 461
T+ +I A L+ G A + + + A D ++GL+ L
Sbjct: 129 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 336 MMKTVGVSPDITSFNYLLTAYCYNGNLMAASKMMKRI-EEEELGADSRTYDALVLGACRA 394
K + P++ S+N ++ A+C GN+ A ++ + I S TY L G +A
Sbjct: 206 FFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQA 265
Query: 395 GKVEGALMVLRRIEDDKVHALHSTHLHIISAFLKLGYYAQAVKF 438
G++ A +LR + A + + ++I +L LG + +AV+F
Sbjct: 266 GRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEF 309