Jatropha Genome Database

JcCB0034131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0034131.10 + phase: 0 /TE
         (1349 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   305   2e-82
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   108   3e-23
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    93   1e-18
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    64   8e-10
ATMG00710.1 | Symbols: ORF120 | hypothetical protein | chrM:2075...    55   3e-07

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  305 bits (780), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 166/451 (36%), Positives = 255/451 (56%), Gaps = 32/451 (7%)

Query: 801  QRQRRPAISSDYVVYSLE----HECE--LSIDKDPVSFQKAMECDNSEK----------- 843
            +R R+PA   DY  +S+     H+    LS +K    +   + C    K           
Sbjct: 36   RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95

Query: 844  --WFNAMKEEMQSMSDNQVWDLVELPEGSKQVGCKWVFKTKWDFKGNIERYKARLVAKGY 901
              W  AM +E+ +M     W++  LP   K +GCKWV+K K++  G IERYKARLVAKGY
Sbjct: 96   LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155

Query: 902  TQKDGIDYKETFSPVSKKDSLRIILALVAHYDLELHQMDVKTTFLNGDLEKELYMDQPEG 961
            TQ++GID+ ETFSPV K  S+++ILA+ A Y+  LHQ+D+   FLNGDL++E+YM  P G
Sbjct: 156  TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215

Query: 962  FVV----TXKENLVCELKKSIYGLKQASRQWYLKFNNTITSYGFIENTIDQCICMKVSGS 1017
            +      +   N VC LKKSIYGLKQASRQW+LKF+ T+  +GF+++  D    +K++ +
Sbjct: 216  YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275

Query: 1018 KLIMLALYVDDILLAANDVGLLHDVNGFLSENFEMKDMGEASFVIGIEIFRDRSQGLLKL 1077
              + + +YVDDI++ +N+   + ++   L   F+++D+G   + +G+EI   RS   + +
Sbjct: 276  LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSAAGINI 333

Query: 1078 SQRAYIDKVLERFRMEKYSTGIVPIXKGDRFSKMQCCKNDLERNEMDSIPYASVVGSLMY 1137
             QR Y   +L+   +       VP+     FS       D     +D+  Y  ++G LMY
Sbjct: 334  CQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHS--GGDF----VDAKAYRRLIGRLMY 387

Query: 1138 AQTCTRLDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTKDHILTYRKSSHLEVVGYS 1197
             Q  TRLDISFAV  L ++   P + H +A  K+L Y++GT    L Y   + +++  +S
Sbjct: 388  LQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFS 446

Query: 1198 DSDYAGCVDSRKSTFGYLSLLAGGAVSWKTE 1228
            D+ +  C D+R+ST GY   L    +SWK++
Sbjct: 447  DASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
            chrM:227709-228431 REVERSE
          Length = 240

 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 10/207 (4%)

Query: 1022 LALYVDDILLAANDVGLLHDVNGFLSENFEMKDMGEASFVIGIEIFRDRSQGLLKLSQRA 1081
            L LYVDDILL  +   LL+ +   LS  F MKD+G   + +GI+I +    GL  LSQ  
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLF-LSQTK 60

Query: 1082 YIDKVLERFRMEKYSTGIVPIXKGDRFSKMQCCKNDLERNEMDSIPYASVVGSLMYAQTC 1141
            Y +++L    M        P+        ++   +       D   + S+VG+L Y  T 
Sbjct: 61   YAEQILNNAGMLDCKPMSTPL-------PLKLNSSVSTAKYPDPSDFRSIVGALQYL-TL 112

Query: 1142 TRLDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTKDHILTYRKSSHLEVVGYSDSDY 1201
            TR DIS+AV ++ +    P +  +   K+VLRY++GT  H L   K+S L V  + DSD+
Sbjct: 113  TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172

Query: 1202 AGCVDSRKSTFGYLSLLAGGAVSWKTE 1228
            AGC  +R+ST G+ + L    +SW  +
Sbjct: 173  AGCTSTRRSTTGFCTFLGCNIISWSAK 199


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 92.8 bits (229), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 3/111 (2%)

Query: 824 SIDKDPVSFQKAMECDNSEKWFNAMKEEMQSMSDNQVWDLVELPEGSKQVGCKWVFKTKW 883
           +I K+P S   A++      W  AM+EE+ ++S N+ W LV  P     +GCKWVFKTK 
Sbjct: 23  TIKKEPKSVIFALK---DPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKL 79

Query: 884 DFKGNIERYKARLVAKGYTQKDGIDYKETFSPVSKKDSLRIILALVAHYDL 934
              G ++R KARLVAKG+ Q++GI + ET+SPV +  ++R IL +    ++
Sbjct: 80  HSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
            chrM:68918-69253 REVERSE
          Length = 111

 Score = 63.5 bits (153), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/79 (39%), Positives = 48/79 (60%)

Query: 1140 TCTRLDISFAVGMLGRYQSNPGMDHWKAAKKVLRYLQGTKDHILTYRKSSHLEVVGYSDS 1199
            T TR D++FAV  L ++ S       +A  KVL Y++GT    L Y  +S L++  ++DS
Sbjct: 4    TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADS 63

Query: 1200 DYAGCVDSRKSTFGYLSLL 1218
            D+A C D+R+S  G+ SL+
Sbjct: 64   DWASCPDTRRSVTGFCSLV 82


>ATMG00710.1 | Symbols: ORF120 | hypothetical protein |
           chrM:207553-207915 REVERSE
          Length = 120

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 597 NRTLMKMVRSMLNNCTVPLSLWMDALKTAAYLLNRVPSKAVP-KTPYELWTRRKPNLRHL 655
           NRT+++ VRSML  C +P +   DA  TA +++N+ PS A+    P E+W +  P   +L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 656 HVWGCPAKVTIYNPHEKKLDTRTVSG 681
             +GC A +   +  E KL  R   G
Sbjct: 62  RRFGCVAYI---HCDEGKLKPRAKKG 84