Jatropha Genome Database

JcCB0033761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0033761.10 + phase: 0 
         (225 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G56880.1 | Symbols:  | VQ motif-containing protein | chr3:210...   122   2e-28
AT2G41010.1 | Symbols: ATCAMBP25 | ATCAMBP25 (ARABIDOPSIS THALIA...   110   6e-25

>AT3G56880.1 | Symbols:  | VQ motif-containing protein |
           chr3:21060044-21060781 FORWARD
          Length = 245

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/255 (37%), Positives = 128/255 (50%), Gaps = 45/255 (17%)

Query: 2   ENLASLEPFLFR-TFQ-DSWI-SEAYARDTETLTKALQKSL-------------FSDNNL 45
           E LAS++P+ FR  F  DSW+ S++++ D++ L KAL +S+             F D++ 
Sbjct: 5   EGLASVDPWSFRQNFNIDSWLLSDSFSHDSDILAKALHRSISTSTESSPLSPSSFFDSST 64

Query: 46  ICSDTQHPPTTPTASNVS-GSDPETVAPP-----KRQRNGIPATSGXXXXX--XXXXXXX 97
              D   P T    SNVS GSDPE  A       KR+R   P  SG              
Sbjct: 65  AAVDFSPPQTL---SNVSFGSDPEIPAASALGLGKRKRG--PGVSGGKQTKRRSRVSNKK 119

Query: 98  XQTTFITADPANFRQMVQQVTGVRF-GNAQLPPVPVLKPEPQRPGTRLHAAAGCL----- 151
            QTTFITAD ANFRQMVQQVTG +F G++     P++KPEP R  +RL  + G L     
Sbjct: 120 SQTTFITADAANFRQMVQQVTGAKFLGSSNSIFAPIVKPEPHRLASRLPPSCGNLDRSSA 179

Query: 152 -PTLDTSAFLLDHHQQPQMXXXXXXXXXXXXXXXXXXXXXXXXFPQPVVADGGPTAGLDY 210
            PTLDTS+FL +HHQ+  +                                GG ++ ++ 
Sbjct: 180 VPTLDTSSFLSNHHQENIITDLGAPTGSFHHQSSAGTTTANV---------GGGSSAVEL 230

Query: 211 DTFSSFPTLESWKVM 225
           D++ SFPTLESWKVM
Sbjct: 231 DSYPSFPTLESWKVM 245


>AT2G41010.1 | Symbols: ATCAMBP25 | ATCAMBP25 (ARABIDOPSIS THALIANA
           CALMODULIN (CAM)-BINDING PROTEIN OF 25 KDA); calmodulin
           binding | chr2:17114015-17114731 REVERSE
          Length = 238

 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 123/244 (50%), Gaps = 30/244 (12%)

Query: 2   ENLASLEPFLFR-TFQ-DSWI-SEAYARDTETLTKALQKSLFSDNNLI-------CSDTQ 51
           E LAS++ +L+R  F  DSW+ S+ ++ D + L +AL  ++ + + L         S   
Sbjct: 5   EGLASVDSWLYRQGFNVDSWLLSDTFSHDNDLLARALHTTVTAPHTLTPSSAFFDSSAVS 64

Query: 52  HPPTTPT-ASNVSG-SDPETVAP-PKRQRNGIPATSGXXXXXXXXXXXXXQTTFITADPA 108
           HP +T T +S VSG SDPE +    KR+RN +  T G             QTTFITADP+
Sbjct: 65  HPSSTNTLSSTVSGASDPEIIGGGAKRKRNCL-LTDGKAAKRRARASKKSQTTFITADPS 123

Query: 109 NFRQMVQQVTGVRFGNAQLPPV---PVLKPEPQRPGTRLHAA----AGCLPTLDTSAFLL 161
           NFRQMVQQVTG ++ +         P++KPEP R   +L       +  +P LDTSAFL 
Sbjct: 124 NFRQMVQQVTGAKYIDDSSSFGIFDPIVKPEPLRFVNKLPCGPSDRSTAVPMLDTSAFLS 183

Query: 162 DHHQQPQMXXXXXXXXXXXXXXXXXXXXXXXXFPQPVVADGGPTAGLDYDTFSSFPTLES 221
           +HHQ+                            P      GG  + +++D + +FPTLES
Sbjct: 184 NHHQENLAVGNAFSGNSSSVGLPSGK-------PSATADPGG--SAVEFDNYPTFPTLES 234

Query: 222 WKVM 225
           WKVM
Sbjct: 235 WKVM 238