Jatropha Genome Database
- JcCB0031431.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0031431.20 - phase: 0
(110 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23805.1 | Symbols: RALFL24 | RALFL24 (ralf-like 24); signal ... 106 3e-24
AT4G13950.1 | Symbols: RALFL31 | RALFL31 (ralf-like 31); signal ... 104 1e-23
AT1G02900.1 | Symbols: RALFL1, RALF1, ATRALF1 | RALF1 (RAPID ALK... 89 5e-19
AT4G15800.1 | Symbols: RALFL33 | RALFL33 (ralf-like 33); signal ... 88 1e-18
AT3G05490.1 | Symbols: RALFL22 | RALFL22 (ralf-like 22); signal ... 83 4e-17
AT3G16570.1 | Symbols: RALFL23 | RALFL23 (ralf-like 23); signal ... 80 3e-16
AT2G33775.1 | Symbols: RALFL19 | RALFL19 (ralf-like 19); signal ... 64 2e-11
AT1G28270.1 | Symbols: RALFL4 | RALFL4 (ralf-like 4); signal tra... 61 1e-10
>AT3G23805.1 | Symbols: RALFL24 | RALFL24 (ralf-like 24); signal
transducer | chr3:8586467-8586823 FORWARD
Length = 118
Score = 106 bits (264), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 77/113 (68%), Gaps = 10/113 (8%)
Query: 1 MSRT-ELYILALIFLHTHFAICNGVSVSGLNSLENTEIDAVMRRVDWLEEAEM----ESE 55
MSR+ L L+L+ L TH +I V + +N EIDA++ R + E E SE
Sbjct: 1 MSRSLALVYLSLLCLQTHLSISVTVPIPSVNG----EIDAMLNRNGVIGEEEGEEMMPSE 56
Query: 56 ISRRVLLMQK-YISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 107
ISRRV++M+K YISYETL+RDMVPC KPGASYY C +G+AN Y+RGC VITRC
Sbjct: 57 ISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRC 109
>AT4G13950.1 | Symbols: RALFL31 | RALFL31 (ralf-like 31); signal
transducer | chr4:8058268-8058609 REVERSE
Length = 113
Score = 104 bits (259), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 71/110 (64%), Gaps = 16/110 (14%)
Query: 4 TELYILALIFL---HTHFAICNGVSVSGLNSLENTEIDAVMRRVDWLEEAE--MESEISR 58
T L I A++FL F I + N EIDA++ R + E E M +EISR
Sbjct: 5 TALVIFAILFLLISADAFPIPS----------PNGEIDAMLIRNSIIGEDEDLMPTEISR 54
Query: 59 RVLLMQK-YISYETLKRDMVPCAKPGASYYDCHAGEANPYSRGCEVITRC 107
RVL+ QK YI YETL+RDMVPC KPGASYYDC +G+AN YSRGC+ ITRC
Sbjct: 55 RVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYSRGCDTITRC 104
>AT1G02900.1 | Symbols: RALFL1, RALF1, ATRALF1 | RALF1 (RAPID
ALKALINIZATION FACTOR 1); signal transducer |
chr1:653976-654338 REVERSE
Length = 120
Score = 89.0 bits (219), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 48 EEAEMESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITR 106
EE EM+SEI+RR+L KYISY++LKR+ VPC++ GASYY+C G +ANPYSRGC I R
Sbjct: 58 EEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIAR 117
Query: 107 CR 108
CR
Sbjct: 118 CR 119
>AT4G15800.1 | Symbols: RALFL33 | RALFL33 (ralf-like 33); signal
transducer | chr4:8984915-8985265 FORWARD
Length = 116
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 7/106 (6%)
Query: 8 ILALIFLHTHFAICNGVSVSGLNSLEN----TEIDAVMRRVDWLEEAEMESEISRRVLLM 63
I+A++ +H FA S +E+ T + + + EE EM+SEI+RR+L
Sbjct: 12 IIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAE--EEFEMDSEINRRILAT 69
Query: 64 QKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRCR 108
KYISY L+R+ VPC++ GASYY+C G +ANPYSRGC ITRCR
Sbjct: 70 TKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115
>AT3G05490.1 | Symbols: RALFL22 | RALFL22 (ralf-like 22); signal
transducer | chr3:1591381-1591740 FORWARD
Length = 119
Score = 82.8 bits (203), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Query: 52 MESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRCR 108
+S+ISRR+L +KYISY ++R+ VPC++ GASYY+C G +ANPYSRGC ITRCR
Sbjct: 61 FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118
>AT3G16570.1 | Symbols: RALFL23 | RALFL23 (ralf-like 23); signal
transducer | chr3:5644748-5645164 FORWARD
Length = 138
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 53 ESEISRRVLLMQKYISYETLKRDMVPCAKPGASYYDCHAG-EANPYSRGCEVITRCR 108
+SEI+RR+L ++YISY L+R+ +PC++ GASYY+C G +ANPYSRGC ITRCR
Sbjct: 80 DSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 136
>AT2G33775.1 | Symbols: RALFL19 | RALFL19 (ralf-like 19); signal
transducer | chr2:14288546-14288878 FORWARD
Length = 110
Score = 63.5 bits (153), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 52 MESEISRRVLLMQK-YISYETLKRDMVPCAKPGASYYDCHAGE-ANPYSRGCEVITRC 107
M+SE +RR L ++ YISY L+++ VPC++ G SYYDC + ANPY RGC VIT C
Sbjct: 48 MDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105
>AT1G28270.1 | Symbols: RALFL4 | RALFL4 (ralf-like 4); signal
transducer | chr1:9883165-9883497 FORWARD
Length = 110
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 49 EAEMESEISRRVLLM-QKYISYETLKRDMVPCAKPGASYYDCHA-GEANPYSRGCEVITR 106
E+ M+SE +RR L ++YI Y+ LK++ VPC++ G SYYDC NPY RGC IT
Sbjct: 45 ESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITH 104
Query: 107 C 107
C
Sbjct: 105 C 105